Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007421
(1604 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039888.1| 4-trimethylaminobutyraldehyde dehydrogenase ... 899 0.0
Alignment gi|NP_001068835.1| aldehyde dehydrogenase, mitochondrial precur... 339 4e-93
Alignment gi|XP_002690901.1| PREDICTED: aldehyde dehydrogenase 1 family, ... 320 2e-87
Alignment gi|XP_615062.5| PREDICTED: aldehyde dehydrogenase 1A2, partial ... 319 5e-87
Alignment gi|NP_776664.1| retinal dehydrogenase 1 [Bos taurus]. 317 1e-86
Alignment gi|NP_001069094.1| aldehyde dehydrogenase family 8 member A1 [B... 314 1e-85
Alignment gi|NP_001096557.1| 10-formyltetrahydrofolate dehydrogenase [Bos... 311 1e-84
Alignment gi|XP_002689768.1| PREDICTED: aldehyde dehydrogenase 1 family, ... 309 5e-84
Alignment gi|XP_599364.5| PREDICTED: aldehyde dehydrogenase 1 family, mem... 309 5e-84
Alignment gi|NP_001178320.1| aldehyde dehydrogenase 1 family, member L2 [... 303 3e-82
>ref|NP_001039888.1| 4-trimethylaminobutyraldehyde dehydrogenase [Bos taurus].
Length = 494
Score = 899 bits (2323), Expect = 0.0
Identities = 441/481 (91%), Positives = 456/481 (94%)
Frame = +3
Query: 108 MSTGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATFTCSGEKEVNLAVQDAKA 287
MSTGTF+VSQPLNYRGGARV+PVDASGTEKAFEPA+GRVIATFTCSGEKEVNLAVQDAKA
Sbjct: 1 MSTGTFVVSQPLNYRGGARVEPVDASGTEKAFEPASGRVIATFTCSGEKEVNLAVQDAKA 60
Query: 288 AFKIWSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSIFEARLDVDISWQCLEYY 467
AFKIWSQKSGMERCRILL TMETINNGKSIFEAR D+D SWQCLEYY
Sbjct: 61 AFKIWSQKSGMERCRILLEAARIIRERRDEIATMETINNGKSIFEARWDIDTSWQCLEYY 120
Query: 468 AGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFK 647
AGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAM+FK
Sbjct: 121 AGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMVFK 180
Query: 648 PSPFTPLSVLLLAEIYTEAGVPPGLFNVVQGGATTGQLLCQHRDVAKISFTGSVPTGSKI 827
PSPFTP+SVLLLAEIYTEAGVPPGLFNVVQGGA TGQ LCQHRDVAK+SFTGSVPTGSKI
Sbjct: 181 PSPFTPVSVLLLAEIYTEAGVPPGLFNVVQGGAATGQFLCQHRDVAKVSFTGSVPTGSKI 240
Query: 828 MEMSAKGIKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEI 1007
MEMSAKGIKPVTLELGGKSPLIIFSDCDM NAVKGALMANFLTQGEVCCNGTRVFVQKEI
Sbjct: 241 MEMSAKGIKPVTLELGGKSPLIIFSDCDMKNAVKGALMANFLTQGEVCCNGTRVFVQKEI 300
Query: 1008 LDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLY 1187
LD+FTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLER+LGFVKVAKEQGAKVLCGGD++
Sbjct: 301 LDQFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERVLGFVKVAKEQGAKVLCGGDVF 360
Query: 1188 VPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLA 1367
VPEDPKLK+GYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEV+ERA DTTFGLA
Sbjct: 361 VPEDPKLKDGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVLERANDTTFGLA 420
Query: 1368 AGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENGRVTI*YXITL 1547
AGVFTRDIQRAHRVVAELQAGMCFI +YNVSPVELPFGGYKKSGFGRENGRVTI Y L
Sbjct: 421 AGVFTRDIQRAHRVVAELQAGMCFINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQL 480
Query: 1548 R 1550
+
Sbjct: 481 K 481
>ref|NP_001068835.1| aldehyde dehydrogenase, mitochondrial precursor [Bos taurus].
Length = 520
Score = 339 bits (870), Expect = 4e-93
Identities = 188/443 (42%), Positives = 260/443 (58%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
P+TG VI + +V+ AV+ A+AAF++ W + ER R+L
Sbjct: 62 PSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTY 121
Query: 378 XXTMETINNGKS-IFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
+ET++NGK I +D+D+ +CL YYAG A G+ I + G F YTR EP+GV
Sbjct: 122 LAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGV 181
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK PALA GN ++ K + TPL+ L +A + EAG PPG+ NV+
Sbjct: 182 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVI 241
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDC 908
G G T G + H DV K++FTGS G I + K +K VTLELGGKSP II SD
Sbjct: 242 PGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDA 301
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM AV+ A A F QG+ CC G+R FVQ++I +F E V + + +G+P T
Sbjct: 302 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQ 361
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP ++ +++LG++K KE+GAK+LCGG GY+++P V + +D MT
Sbjct: 362 GPQVDETQFKKVLGYIKSGKEEGAKLLCGG------GAAADRGYFIQPTVFGDVQDGMTI 415
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
KEEIFGPVM IL F + EVV RA ++ +GLAA VFT+D+ +A+ + LQAG ++
Sbjct: 416 AKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 475
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
Y+V + PFGGYK SG GRE G
Sbjct: 476 YDVFGAQSPFGGYKLSGSGRELG 498
>ref|XP_002690901.1| PREDICTED: aldehyde dehydrogenase 1 family, member A2 isoform 1 [Bos
taurus].
Length = 518
Score = 320 bits (821), Expect = 2e-87
Identities = 190/487 (39%), Positives = 267/487 (54%), Gaps = 9/487 (1%)
Frame = +3
Query: 84 LRPAPVAAMS---TGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATFTCSGEK 254
L P+P + T FI ++ N G RV PV + PATG + + +
Sbjct: 25 LLPSPTPNLEIKYTKIFINNEWQNSESG-RVFPV--------YNPATGEQVCEVQEADKA 75
Query: 255 EVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSIFEA 425
+++ AVQ A+ AF +W + ER R+L TME++N GK +A
Sbjct: 76 DIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQA 135
Query: 426 -RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACW 602
+D+ + L YYAG A + G I + G F +TR EP+GVC I WN+P + W
Sbjct: 136 FYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAW 195
Query: 603 KSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTGQLLCQHRD 779
K APAL CGN ++ KP+ TPLS L + + EAG PPG+ N++ G G T G + H
Sbjct: 196 KIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHVG 255
Query: 780 VAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLT 956
+ KI+FTGS G I E + + +K VTLELGGKSP IIF+D D+ AV+ A F
Sbjct: 256 IDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFN 315
Query: 957 QGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFV 1136
QG+ C G+R+FV++ I ++F V++ +R +G P T GP I++ +IL +
Sbjct: 316 QGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELI 375
Query: 1137 KVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFD 1316
+ +GAK+ CGG ++G+++ P V +N DDM KEEIFGPV IL F
Sbjct: 376 QSGVAEGAKLECGGKGLG------RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFK 429
Query: 1317 TEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKS 1496
T EV+ERA ++ FGL A VFT DI +A V + +QAG +I YN + PFGG+K S
Sbjct: 430 TMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMS 489
Query: 1497 GFGRENG 1517
G GRE G
Sbjct: 490 GNGREMG 496
>ref|XP_615062.5| PREDICTED: aldehyde dehydrogenase 1A2, partial [Bos taurus].
Length = 479
Score = 319 bits (817), Expect = 5e-87
Identities = 178/445 (40%), Positives = 251/445 (56%), Gaps = 6/445 (1%)
Frame = +3
Query: 201 FEPATGRVIATFTCSGEKEVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXX 371
+ PATG + + + +++ AVQ A+ AF +W + ER R+L
Sbjct: 19 YNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDR 78
Query: 372 XXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPL 548
TME++N GK +A +D+ + L YYAG A + G I + G F +TR EP+
Sbjct: 79 AVLATMESLNGGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPI 138
Query: 549 GVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFN 728
GVC I WN+P + WK APAL CGN ++ KP+ TPLS L + + EAG PPG+ N
Sbjct: 139 GVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVIN 198
Query: 729 VVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFS 902
++ G G T G + H + KI+FTGS G I E + + +K VTLELGGKSP IIF+
Sbjct: 199 ILPGYGPTAGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFA 258
Query: 903 DCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDT 1082
D D+ AV+ A F QG+ C G+R+FV++ I ++F V++ +R +G P T
Sbjct: 259 DADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTT 318
Query: 1083 RMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDM 1262
GP I++ +IL ++ +GAK+ CGG ++G+++ P V +N DDM
Sbjct: 319 EQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLG------RKGFFIEPTVFSNVTDDM 372
Query: 1263 TCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI 1442
KEEIFGPV IL F T EV+ERA ++ FGL A VFT DI +A V + +QAG +I
Sbjct: 373 RIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWI 432
Query: 1443 XHYNVSPVELPFGGYKKSGFGRENG 1517
YN + PFGG+K SG GRE G
Sbjct: 433 NCYNALNAQSPFGGFKMSGNGREMG 457
>ref|NP_776664.1| retinal dehydrogenase 1 [Bos taurus].
Length = 501
Score = 317 bits (813), Expect = 1e-86
Identities = 176/445 (39%), Positives = 255/445 (57%), Gaps = 6/445 (1%)
Frame = +3
Query: 201 FEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXX 371
F PAT + +++V+ AV+ + AF+I W ER R+L
Sbjct: 41 FNPATEEKLCEVEEGDKEDVDKAVKAVRQAFQIGSPWRTMDASERGRLLNKLADLIERDH 100
Query: 372 XXXXTMETINNGKSIFEARL-DVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPL 548
TME +N GK A L D+ + L Y AG A + G I + G F YTR EP+
Sbjct: 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPV 160
Query: 549 GVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFN 728
GVC I WN+P + WK PAL+CGN ++ KP+ TPL+ L + + EAG PPG+ N
Sbjct: 161 GVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVN 220
Query: 729 VVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFS 902
+V G G T G + H DV K++FTGS G I E + K +K V+LELGGKSP I+F+
Sbjct: 221 IVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 280
Query: 903 DCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDT 1082
D D+ NAV+ A F QG+ C +R+FV++ I D+F V++ ++ +G+PL
Sbjct: 281 DADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340
Query: 1083 RMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDM 1262
GP I++ E+IL ++ K++GAK+ CGG P +GY+++P V ++ DDM
Sbjct: 341 SQGPQIDKEQYEKILDLIESGKKEGAKLECGGG------PWGNKGYFIQPTVFSDVTDDM 394
Query: 1263 TCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI 1442
KEEIFGPV I+ F + +V++RA +T +GL+AG+FT DI +A V + LQ+G ++
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWV 454
Query: 1443 XHYNVSPVELPFGGYKKSGFGRENG 1517
Y+V + PFGG+K SG GRE G
Sbjct: 455 NCYSVVSAQCPFGGFKMSGNGRELG 479
>ref|NP_001069094.1| aldehyde dehydrogenase family 8 member A1 [Bos taurus].
Length = 487
Score = 314 bits (805), Expect = 1e-85
Identities = 167/447 (37%), Positives = 263/447 (58%), Gaps = 6/447 (1%)
Frame = +3
Query: 198 AFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLXXXXXXXXXXXX 377
+++P+TG V SG++E+ AV+ A+AAF WS +S ER ++L
Sbjct: 27 SYDPSTGEVYCHVPNSGKEEIEAAVEAARAAFPGWSSRSPQERSQVLQRLADLLEQSLEE 86
Query: 378 XXTMETINNGKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPG-GSFGYTRREPLG 551
E+ + GK+I AR +D+ + ++A E Q+ G YT R P+G
Sbjct: 87 LAQAESKDQGKTITLARTMDIPRAVHNFRFFASSILHHTSECTQMDHLGCLHYTVRAPVG 146
Query: 552 VCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNV 731
+ I WN P + WK APA+A GN +I KPS T ++ ++ + +AGVPPG+ N+
Sbjct: 147 IAALISPWNLPLYLLTWKIAPAIAAGNTVIAKPSELTSVTAWMMCRLLEKAGVPPGVVNI 206
Query: 732 VQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDC 908
V G G G+ L H +V ISFTGS PT +IM++SA K ++LELGGK+P +IF D
Sbjct: 207 VFGTGPRVGEALVSHPEVPLISFTGSQPTAERIMQLSAPHCKKLSLELGGKNPAVIFEDA 266
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
++ + + ++F QGE+C +R+FVQ+ I +F + V+ + K+G P M
Sbjct: 267 NLAECIPTTVRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVEAARMWKVGIPSDPSADM 326
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCG---GDLYVPEDPKLKEGYYMRPCVLTNCRDD 1259
G LI++ HLE++ ++K A+ +GA++LCG L +P P+ + GY+M P V+T+ +D+
Sbjct: 327 GALISKAHLEKVRSYIKKARMEGAQILCGEGVDKLNLP--PRNQAGYFMLPTVITDVKDE 384
Query: 1260 MTCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCF 1439
C+KEEIFGPV ++ FD+E EV++RA + +GLAA V++ ++ R HRV +LQ+G+ +
Sbjct: 385 SCCMKEEIFGPVTCVVPFDSEEEVIQRANNVKYGLAATVWSGNVGRVHRVAKKLQSGLVW 444
Query: 1440 IXHYNVSPVELPFGGYKKSGFGRENGR 1520
+ + + LPFGG K SG GRE +
Sbjct: 445 TNCWLIRELNLPFGGMKSSGVGREGAK 471
>ref|NP_001096557.1| 10-formyltetrahydrofolate dehydrogenase [Bos taurus].
Length = 902
Score = 311 bits (797), Expect = 1e-84
Identities = 185/466 (39%), Positives = 265/466 (56%), Gaps = 14/466 (3%)
Frame = +3
Query: 174 VDASG--TEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFK--IWSQKSGMERCRILL 341
VDA G T + P G + + + +V+ AV AK AF+ +W + S +R R+L
Sbjct: 431 VDAEGGKTYETINPTDGSALCQVSLAQVSDVDKAVAAAKDAFENGLWGKISARDRGRLLY 490
Query: 342 XXXXXXXXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQL--- 509
T+E ++ G A + V +S Q Y+AG + G I +
Sbjct: 491 RLAELMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQA 550
Query: 510 -PGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLA 686
P + TRREP+GVC I WNYP + WK+A LA GN ++ KP+ TPL+ L A
Sbjct: 551 RPNRNLTMTRREPIGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFA 610
Query: 687 EIYTEAGVPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPV 860
E+ +AG+P G+ NV+ G G+ GQ L H DV KI FTGS G IM+ A +K V
Sbjct: 611 ELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKV 670
Query: 861 TLELGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQ 1040
+LELGGKSPL+IF+DCD+G AV+ + + F +GE C R+FV+ I D+F VV++
Sbjct: 671 SLELGGKSPLLIFADCDLGKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDQFVRRVVEE 730
Query: 1041 TQRIKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGY 1220
++KIG+PL DT GP + HL+++L + + E+GA ++CGG VP + G+
Sbjct: 731 VGKMKIGNPLDRDTNHGPQNHLAHLQKLLEYCQRGVEEGATLVCGGK-QVP-----RPGF 784
Query: 1221 YMRPCVLTNCRDDMTCVKEEIFGPVMSILSF---DTEAEVVERAYDTTFGLAAGVFTRDI 1391
+ P V T+ +D M +EE FGP+M I F D +A V+ RA T FGLA+GVFTRDI
Sbjct: 785 FFEPTVFTDVQDHMFIAREESFGPIMIISRFADGDVDA-VLTRANATEFGLASGVFTRDI 843
Query: 1392 QRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENGRVTI 1529
+A V +L+AG F+ YN + V PFGG+K+SGFG++ G +
Sbjct: 844 NKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAAL 889
>ref|XP_002689768.1| PREDICTED: aldehyde dehydrogenase 1 family, member B1 [Bos taurus].
Length = 517
Score = 309 bits (791), Expect = 5e-84
Identities = 169/443 (38%), Positives = 255/443 (57%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
PATG VI +V+LA + A+AAF++ W ++R +L
Sbjct: 59 PATGEVIGHVAEGDWADVDLAAKAARAAFRLGSPWRWMDALKRGWLLNHLADLVERDCVY 118
Query: 378 XXTMETINNGKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
++E+++NGK E+ LD+D + Y+AG A G+ I + G F +TR EP+GV
Sbjct: 119 LASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGV 178
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK A ALA GN ++ K + TP S L LA + E G+PPGL N+V
Sbjct: 179 CCQIIPWNFPLVMQSWKLALALAMGNTVVTKVAEQTPFSALYLASLIKEVGLPPGLVNIV 238
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDC 908
G G T G + H D+ K++FTGS G I + + +K VTLELGGKS I+ +D
Sbjct: 239 TGYGPTAGAAIAHHMDIGKVAFTGSTKVGHLIQKAAGNSSLKRVTLELGGKSLSIVLADA 298
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM +AV+ A F G+ CC G+ F+++ I D+F E V++ ++ ++G+P DT+
Sbjct: 299 DMDHAVEQRQEALFFNMGQCCCPGSWTFIEESIYDEFLERTVEKAKQRRVGNPFDLDTQQ 358
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP ++R ERILG++++ +++GAK+LCGG+ + ++ ++++P V +DDM
Sbjct: 359 GPQVDRERFERILGYIQLGQKEGAKLLCGGEHF------RQQCFFIKPTVFGGVQDDMRI 412
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
+EEIFGPV + F EV+ERA +T +GLAA VFT+D+ +A LQ G ++
Sbjct: 413 AREEIFGPVQPLFKFKKIEEVIERADNTRYGLAAAVFTQDLDKAMYFTQALQTGTVWVNT 472
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
YNV P GG+K+ G GRE G
Sbjct: 473 YNVVTCHTPLGGFKEPGNGRELG 495
>ref|XP_599364.5| PREDICTED: aldehyde dehydrogenase 1 family, member B1 [Bos taurus].
Length = 517
Score = 309 bits (791), Expect = 5e-84
Identities = 169/443 (38%), Positives = 255/443 (57%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
PATG VI +V+LA + A+AAF++ W ++R +L
Sbjct: 59 PATGEVIGHVAEGDWADVDLAAKAARAAFRLGSPWRWMDALKRGWLLNHLADLVERDCVY 118
Query: 378 XXTMETINNGKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
++E+++NGK E+ LD+D + Y+AG A G+ I + G F +TR EP+GV
Sbjct: 119 LASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGV 178
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK A ALA GN ++ K + TP S L LA + E G+PPGL N+V
Sbjct: 179 CCQIIPWNFPLVMQSWKLALALAMGNTVVTKVAEQTPFSALYLASLIKEVGLPPGLVNIV 238
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDC 908
G G T G + H D+ K++FTGS G I + + +K VTLELGGKS I+ +D
Sbjct: 239 TGYGPTAGAAIAHHMDIGKVAFTGSTKVGHLIQKAAGNSSLKRVTLELGGKSLSIVLADA 298
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM +AV+ A F G+ CC G+ F+++ I D+F E V++ ++ ++G+P DT+
Sbjct: 299 DMDHAVEQRQEALFFNMGQCCCPGSWTFIEESIYDEFLERTVEKAKQRRVGNPFDLDTQQ 358
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP ++R ERILG++++ +++GAK+LCGG+ + ++ ++++P V +DDM
Sbjct: 359 GPQVDRERFERILGYIQLGQKEGAKLLCGGEHF------RQQCFFIKPTVFGGVQDDMRI 412
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
+EEIFGPV + F EV+ERA +T +GLAA VFT+D+ +A LQ G ++
Sbjct: 413 AREEIFGPVQPLFKFKKIEEVIERADNTRYGLAAAVFTQDLDKAMYFTQALQTGTVWVNT 472
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
YNV P GG+K+ G GRE G
Sbjct: 473 YNVVTCHTPLGGFKEPGNGRELG 495
>ref|NP_001178320.1| aldehyde dehydrogenase 1 family, member L2 [Bos taurus].
Length = 923
Score = 303 bits (776), Expect = 3e-82
Identities = 174/455 (38%), Positives = 259/455 (56%), Gaps = 12/455 (2%)
Frame = +3
Query: 189 TEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI--WSQKSGMERCRILLXXXXXXX 362
T P G I + + +V+ AV AK AF+ W + + +R R++
Sbjct: 459 TYDTINPTDGSTICKVSYASLVDVDKAVAAAKDAFENGEWGRMNARDRGRLMYRLADLME 518
Query: 363 XXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQL----PGGSFG 527
T+E +++G A + + +S Q Y+AG + G I + P +
Sbjct: 519 EKQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNRNLT 578
Query: 528 YTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAG 707
+T++EPLGVC I WNYP + WKSA LA GN ++ KP+ TPL+ L AE+ +AG
Sbjct: 579 FTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSVKAG 638
Query: 708 VPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPVTLELGGK 881
P G+ N++ G G GQ L +H D+ K+ FTGS G +IM+ A +K V+LELGGK
Sbjct: 639 FPKGVINIIPGSGGVVGQHLSEHPDIRKLGFTGSTLIGKQIMKSCAMSNLKKVSLELGGK 698
Query: 882 SPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIG 1061
SPLIIFSDC++ AV+ + A F +GE C R+FV++ I D+F +V++ +++KIG
Sbjct: 699 SPLIIFSDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRMVEEIKKMKIG 758
Query: 1062 DPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVL 1241
DPL T GP ++ HLE++L + + ++GA ++ GG + G++M P V
Sbjct: 759 DPLDRSTDHGPQNHKAHLEKLLQYCEAGVKEGATLVYGG------RQVQRPGFFMEPTVF 812
Query: 1242 TNCRDDMTCVKEEIFGPVMSILSF---DTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVV 1412
T+ D M KEE FGP+M I F D + V++RA +T +GLA+GVFTRDI +A V
Sbjct: 813 TDVEDHMYLAKEESFGPIMVISKFQNGDVDG-VLQRANNTEYGLASGVFTRDINKAMYVS 871
Query: 1413 AELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENG 1517
+L+AG FI YN + V PFGG+K+SGFG++ G
Sbjct: 872 EKLEAGTVFINTYNKTDVAAPFGGFKQSGFGKDLG 906
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 63,324,001
Number of extensions: 1754429
Number of successful extensions: 5027
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4949
Number of HSP's successfully gapped: 29
Length of query: 534
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 427
Effective length of database: 14,140,958
Effective search space: 6038189066
Effective search space used: 6038189066
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007421
(1604 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536148.2| PREDICTED: similar to aldehyde dehydrogenase 9A... 538 e-153
Alignment gi|XP_853628.1| PREDICTED: similar to Aldehyde dehydrogenase, m... 340 2e-93
Alignment gi|XP_538742.2| PREDICTED: similar to aldehyde dehydrogenase 1B... 330 2e-90
Alignment gi|XP_533525.1| PREDICTED: similar to Retinal dehydrogenase 1 (... 325 6e-89
Alignment gi|XP_863924.1| PREDICTED: similar to aldehyde dehydrogenase 1A... 323 2e-88
Alignment gi|XP_533415.2| PREDICTED: similar to aldehyde dehydrogenase 8A... 323 4e-88
Alignment gi|XP_535494.2| PREDICTED: similar to aldehyde dehydrogenase 1A... 320 2e-87
Alignment gi|XP_863947.1| PREDICTED: similar to aldehyde dehydrogenase 1A... 319 5e-87
Alignment gi|XP_863966.1| PREDICTED: similar to aldehyde dehydrogenase 1A... 315 8e-86
Alignment gi|XP_533713.2| PREDICTED: similar to 10-formyltetrahydrofolate... 313 2e-85
>ref|XP_536148.2| PREDICTED: similar to aldehyde dehydrogenase 9A1 [Canis familiaris].
Length = 317
Score = 538 bits (1386), Expect = e-153
Identities = 261/298 (87%), Positives = 282/298 (94%)
Frame = +3
Query: 636 MIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQGGATTGQLLCQHRDVAKISFTGSVPT 815
M+FKPSPFTP SVLLLAEIYTEAG+PPGLFNVVQGGA TGQLLCQH DVAK+SFTGSVPT
Sbjct: 1 MVFKPSPFTPASVLLLAEIYTEAGMPPGLFNVVQGGAATGQLLCQHPDVAKVSFTGSVPT 60
Query: 816 GSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFV 995
G KIMEM+AKGIKPVTLELGGKSPLIIFSDCD+ N VKGA+MANFLTQGEVCCNGTRVFV
Sbjct: 61 GMKIMEMAAKGIKPVTLELGGKSPLIIFSDCDLENVVKGAMMANFLTQGEVCCNGTRVFV 120
Query: 996 QKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCG 1175
Q+EILD+FT EVVK+TQ+IKIGDPLLEDTRMGPLINRPHLER+LGFVK+AKEQGAKVLCG
Sbjct: 121 QREILDEFTREVVKRTQKIKIGDPLLEDTRMGPLINRPHLERVLGFVKLAKEQGAKVLCG 180
Query: 1176 GDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVVERAYDTT 1355
GD++VPEDPKLK+GYYMRPCVLTNCRDDMTCVKEEIFGPVMSIL FDTEAEV+ERA DT+
Sbjct: 181 GDIHVPEDPKLKDGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILPFDTEAEVLERANDTS 240
Query: 1356 FGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENGRVTI 1529
FGLAAGVFTRDIQRAHRVVA+LQAGMCFI +YNVSPVELPFGGYKKSG E+ R +
Sbjct: 241 FGLAAGVFTRDIQRAHRVVAKLQAGMCFINNYNVSPVELPFGGYKKSGEELESVRANL 298
>ref|XP_853628.1| PREDICTED: similar to Aldehyde dehydrogenase, mitochondrial precursor
(ALDH class 2) (ALDH1) (ALDH-E2) [Canis familiaris].
Length = 521
Score = 340 bits (872), Expect = 2e-93
Identities = 185/449 (41%), Positives = 261/449 (58%), Gaps = 6/449 (1%)
Frame = +3
Query: 189 TEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXX 359
T P+TG VI +++V+ AV+ A+AAF++ W + +R R+L
Sbjct: 57 TFPTINPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLI 116
Query: 360 XXXXXXXXTMETINNGKS-IFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTR 536
+ET++NGK + +D+D+ +CL YYAG A G+ I + G F YTR
Sbjct: 117 ERDRTYLAALETLDNGKPYVISYLVDLDMVLRCLRYYAGWADKYHGKTIPIDGDFFSYTR 176
Query: 537 REPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPP 716
EP+GVC I WN+P + WK PALA GN ++ K + TPL+ L +A + EAG PP
Sbjct: 177 HEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVIVMKVAEQTPLTALYVANLIKEAGFPP 236
Query: 717 GLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPL 890
G+ N++ G G T G + H DV K++FTGS G + + +K VTLELGGKSP
Sbjct: 237 GVVNIIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLVQVAAGNSNLKRVTLELGGKSPN 296
Query: 891 IIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPL 1070
II SD DM AV+ A A F QG+ CC G+R FVQ+++ +F E V + + +G+P
Sbjct: 297 IIMSDADMNWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYAEFVERSVARAKSRVVGNPF 356
Query: 1071 LEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNC 1250
T GP ++ ++ILG++K KE+GAK+LCGG GY+++P V +
Sbjct: 357 DSQTEQGPQVDETQFKKILGYIKSGKEEGAKLLCGG------GAAADRGYFIQPTVFGDV 410
Query: 1251 RDDMTCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAG 1430
+D MT KEEIFGPVM IL F T EV+ RA ++ +GLAA VFT+D+ +A+ + LQAG
Sbjct: 411 QDTMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAG 470
Query: 1431 MCFIXHYNVSPVELPFGGYKKSGFGRENG 1517
+I Y+V + PFGGYK SG GRE G
Sbjct: 471 TVWINCYDVFGAQSPFGGYKMSGSGRELG 499
>ref|XP_538742.2| PREDICTED: similar to aldehyde dehydrogenase 1B1 precursor [Canis
familiaris].
Length = 520
Score = 330 bits (846), Expect = 2e-90
Identities = 191/500 (38%), Positives = 285/500 (57%), Gaps = 12/500 (2%)
Frame = +3
Query: 54 LAVLSPLLRTLR--PAPVA-AMSTGTFIVSQPLNYRGGARVDPVDASGTEKAF---EPAT 215
LA L+P L LR AP + A + + I++ + Y + + ++K F P T
Sbjct: 5 LAPLAPRLLCLRGRTAPYSSAAALPSPILNPDIRYNQLFINNEWQDAASKKTFPTVNPTT 64
Query: 216 GRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXXXXT 386
G VI +V+ AV+ A+ AF++ W + ER R+L +
Sbjct: 65 GEVIGHVAEGDRADVDRAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLAS 124
Query: 387 METINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVG 563
+ET++NGK E+ LD+D + Y+AG A G+ I + G F +TR EP+GVC
Sbjct: 125 LETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQ 184
Query: 564 IGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG- 740
I WN+P + WK APALA GN ++ K + TPLS L LA + EAG PPG+ NVV G
Sbjct: 185 IIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNVVTGY 244
Query: 741 GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPVTLELGGKSPLIIFSDCDMG 917
G T G + +H D+ K++FTGS G I + + +K VTLELGGKSP ++ +D DM
Sbjct: 245 GPTAGAAIARHMDIDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSVVLADADME 304
Query: 918 NAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPL 1097
+AV A F G+ CC G+R FVQ+ I D+F E V++ ++ ++G+P DT+ GP
Sbjct: 305 HAVAQCHEALFFNMGQCCCAGSRTFVQESIYDEFLERTVEKAKQRRVGNPFELDTQQGPQ 364
Query: 1098 INRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKE 1277
+++ ERIL ++++ +++GAK+LCGG+ + G++++P V + +DDM +E
Sbjct: 365 VDKEQFERILNYIRLGQKEGAKLLCGGERFG------DRGFFIKPTVFGDVQDDMKIARE 418
Query: 1278 EIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNV 1457
EIFGPV + F EV+ERA +T +GLAA VFT+D+ +A LQAG ++ YN+
Sbjct: 419 EIFGPVQPLFKFKKIEEVIERANNTRYGLAAAVFTQDLDKAMYFTQALQAGTVWVNTYNI 478
Query: 1458 SPVELPFGGYKKSGFGRENG 1517
PFGG+K+SG GRE G
Sbjct: 479 VTCHTPFGGFKESGNGRELG 498
>ref|XP_533525.1| PREDICTED: similar to Retinal dehydrogenase 1 (RalDH1) (RALDH 1)
(Aldehyde dehydrogenase family 1 member A1) (Aldehyde
dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) isoform 1
[Canis familiaris].
Length = 501
Score = 325 bits (834), Expect = 6e-89
Identities = 179/445 (40%), Positives = 260/445 (58%), Gaps = 6/445 (1%)
Frame = +3
Query: 201 FEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXX 371
F PAT I +++++ AV+ A+ AF+I W + ER R++
Sbjct: 41 FNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGSPWRTMNASERGRLIYKLADLIERDR 100
Query: 372 XXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPL 548
TME+IN GK + LD+ L Y AG A + G I + G FGYTR EP+
Sbjct: 101 LLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKIHGRTIPVDGNFFGYTRHEPI 160
Query: 549 GVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFN 728
GVC I WN+P + WK PAL CGN ++ KP+ TPL+ L +A + EAG PPG+ N
Sbjct: 161 GVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPLTALHVASLIQEAGFPPGVVN 220
Query: 729 VVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFS 902
+V G G T G + H D+ K++FTGS G I E + K +K VTLELGGKSP I+F+
Sbjct: 221 IVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGKSNLKRVTLELGGKSPFIVFA 280
Query: 903 DCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDT 1082
D D+ +AV+ A A F QG+ C +R+FV++ I D+F V++ ++ +G+PL
Sbjct: 281 DSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340
Query: 1083 RMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDM 1262
GP I++ E+IL ++ K++GAK+ CGG P +G++++P V +N D+M
Sbjct: 341 SQGPQIDKKQYEKILDLIESGKKEGAKLECGGG------PWGNKGFFIQPTVFSNVTDEM 394
Query: 1263 TCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI 1442
KEEIFGPV I+ F + +V++RA +T +GLAAG+FT+DI +A V + LQAG ++
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVSSALQAGTVWV 454
Query: 1443 XHYNVSPVELPFGGYKKSGFGRENG 1517
Y+V + PFGG+K SG GRE G
Sbjct: 455 NCYSVVSPQCPFGGFKMSGNGRELG 479
>ref|XP_863924.1| PREDICTED: similar to aldehyde dehydrogenase 1A2 isoform 1 isoform 4
[Canis familiaris].
Length = 494
Score = 323 bits (829), Expect = 2e-88
Identities = 188/484 (38%), Positives = 267/484 (55%), Gaps = 8/484 (1%)
Frame = +3
Query: 84 LRPAPVAAMS---TGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATFTCSGEK 254
L P+P + T FI ++ N G RV PV + PATG + + +
Sbjct: 25 LLPSPTPNLEIKYTKIFINNEWQNSESG-RVFPV--------YNPATGEQVCEVQEADKA 75
Query: 255 EVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSIFEA 425
+++ AVQ A+ AF +W + ER R+L TME++N GK +A
Sbjct: 76 DIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQA 135
Query: 426 -RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACW 602
+D+ + L YYAG A + G I + G F +TR EP+GVC I WN+P + W
Sbjct: 136 FYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAW 195
Query: 603 KSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTGQLLCQHRD 779
K APAL CGN ++ KP+ TPLS L + + EAG PPG+ N++ G G T G + H
Sbjct: 196 KIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIG 255
Query: 780 VAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLTQ 959
+ KI+FTGS P +++M + +K VTLELGGKSP IIF+D D+ AV+ A F Q
Sbjct: 256 IDKIAFTGSSPMSGSMLDMESANLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQ 315
Query: 960 GEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFVK 1139
G+ C G+R+FV++ I ++F V++ +R +G P T GP I++ +IL ++
Sbjct: 316 GQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQ 375
Query: 1140 VAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDT 1319
+GAK+ CGG ++G+++ P V +N DDM KEEIFGPV IL F T
Sbjct: 376 SGVAEGAKLECGG------KGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKT 429
Query: 1320 EAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSG 1499
EV+ERA ++ FGL A VFT DI +A V + +QAG +I YN + PFGG+K SG
Sbjct: 430 MDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSG 489
Query: 1500 FGRE 1511
GRE
Sbjct: 490 NGRE 493
>ref|XP_533415.2| PREDICTED: similar to aldehyde dehydrogenase 8A1 isoform 1 isoform 1
[Canis familiaris].
Length = 487
Score = 323 bits (827), Expect = 4e-88
Identities = 171/445 (38%), Positives = 267/445 (60%), Gaps = 4/445 (0%)
Frame = +3
Query: 198 AFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLXXXXXXXXXXXX 377
+++P+TG V SG++E+ AV+ A+AAF WS +S ER ++L
Sbjct: 27 SYDPSTGEVYCRVPNSGKEEIEAAVEAARAAFPGWSARSPQERSKVLYRLADLLEQSLEE 86
Query: 378 XXTMETINNGKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQL-PGGSFGYTRREPLG 551
E+ + GK++ AR +D+ + Q + ++A E Q P G YT R P+G
Sbjct: 87 LAQAESRDQGKTVTLARSMDIPRAVQNVRFFASSVLHHTSECTQADPAGCVHYTVRAPVG 146
Query: 552 VCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNV 731
+ I WN P + WK APA+A GN +I KPS T ++ ++ ++ +AGVPPG+ N+
Sbjct: 147 IAGLISPWNLPLYLLTWKVAPAIAAGNTVIAKPSELTSVTAWMMCKLLEKAGVPPGVVNI 206
Query: 732 VQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDC 908
V G G G+ L H +V ISFTGS PT +I+ +SA K ++LELGGK+P IIF D
Sbjct: 207 VFGTGPRVGEALVAHPEVPLISFTGSQPTAERIIHLSAPHCKKLSLELGGKNPAIIFEDA 266
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
++ + + ++F QGE+C +R+FVQ+ I ++F E+ V+ T+R K+G P M
Sbjct: 267 NLEECIPTTVKSSFANQGEICLCTSRIFVQRSIYEEFLEKFVEATRRWKVGIPSDPLASM 326
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDP-KLKEGYYMRPCVLTNCRDDMT 1265
G LI++ HLE++ ++K A+ +GA++LCG + P K + GY+M P V+T+ +D+
Sbjct: 327 GALISKAHLEKVRSYIKKARSEGAQILCGEGVDTLSLPAKNQGGYFMLPTVITHIKDESC 386
Query: 1266 CVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIX 1445
C+KEEIFGPV ++ FD+E EV++RA +GLAA V++ ++ R HRV +LQ+G+ +
Sbjct: 387 CMKEEIFGPVTCVVPFDSEEEVIQRANSVKYGLAATVWSCNVGRVHRVAKKLQSGLVWTN 446
Query: 1446 HYNVSPVELPFGGYKKSGFGRENGR 1520
+ + + LPFGG K SG GRE G+
Sbjct: 447 CWLIRELNLPFGGMKSSGVGREGGK 471
>ref|XP_535494.2| PREDICTED: similar to aldehyde dehydrogenase 1A2 isoform 1 isoform 1
[Canis familiaris].
Length = 518
Score = 320 bits (821), Expect = 2e-87
Identities = 190/487 (39%), Positives = 267/487 (54%), Gaps = 9/487 (1%)
Frame = +3
Query: 84 LRPAPVAAMS---TGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATFTCSGEK 254
L P+P + T FI ++ N G RV PV + PATG + + +
Sbjct: 25 LLPSPTPNLEIKYTKIFINNEWQNSESG-RVFPV--------YNPATGEQVCEVQEADKA 75
Query: 255 EVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSIFEA 425
+++ AVQ A+ AF +W + ER R+L TME++N GK +A
Sbjct: 76 DIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQA 135
Query: 426 -RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACW 602
+D+ + L YYAG A + G I + G F +TR EP+GVC I WN+P + W
Sbjct: 136 FYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAW 195
Query: 603 KSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTGQLLCQHRD 779
K APAL CGN ++ KP+ TPLS L + + EAG PPG+ N++ G G T G + H
Sbjct: 196 KIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIG 255
Query: 780 VAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLT 956
+ KI+FTGS G I E + + +K VTLELGGKSP IIF+D D+ AV+ A F
Sbjct: 256 IDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFN 315
Query: 957 QGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFV 1136
QG+ C G+R+FV++ I ++F V++ +R +G P T GP I++ +IL +
Sbjct: 316 QGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELI 375
Query: 1137 KVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFD 1316
+ +GAK+ CGG ++G+++ P V +N DDM KEEIFGPV IL F
Sbjct: 376 QSGVAEGAKLECGGKGLG------RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFK 429
Query: 1317 TEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKS 1496
T EV+ERA ++ FGL A VFT DI +A V + +QAG +I YN + PFGG+K S
Sbjct: 430 TMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMS 489
Query: 1497 GFGRENG 1517
G GRE G
Sbjct: 490 GNGREMG 496
>ref|XP_863947.1| PREDICTED: similar to aldehyde dehydrogenase 1A2 isoform 1 isoform 5
[Canis familiaris].
Length = 496
Score = 319 bits (817), Expect = 5e-87
Identities = 189/486 (38%), Positives = 268/486 (55%), Gaps = 10/486 (2%)
Frame = +3
Query: 84 LRPAPVAAMS---TGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATFTCSGEK 254
L P+P + T FI ++ N G RV PV + PATG + + +
Sbjct: 25 LLPSPTPNLEIKYTKIFINNEWQNSESG-RVFPV--------YNPATGEQVCEVQEADKA 75
Query: 255 EVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSIFEA 425
+++ AVQ A+ AF +W + ER R+L TME++N GK +A
Sbjct: 76 DIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQA 135
Query: 426 -RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACW 602
+D+ + L YYAG A + G I + G F +TR EP+GVC I WN+P + W
Sbjct: 136 FYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAW 195
Query: 603 KSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTGQLLCQHRD 779
K APAL CGN ++ KP+ TPLS L + + EAG PPG+ N++ G G T G + H
Sbjct: 196 KIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIG 255
Query: 780 VAKISFTGSVPTGSKIMEMSA--KGIKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFL 953
+ KI+FTGS TG +++ +A +K VTLELGGKSP IIF+D D+ AV+ A F
Sbjct: 256 IDKIAFTGSTETGLHLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFF 315
Query: 954 TQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGF 1133
QG+ C G+R+FV++ I ++F V++ +R +G P T GP I++ +IL
Sbjct: 316 NQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILEL 375
Query: 1134 VKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSF 1313
++ +GAK+ CGG ++G+++ P V +N DDM KEEIFGPV IL F
Sbjct: 376 IQSGVAEGAKLECGGKGLG------RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRF 429
Query: 1314 DTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKK 1493
T EV+ERA ++ FGL A VFT DI +A V + +QAG +I YN + PFGG+K
Sbjct: 430 KTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKM 489
Query: 1494 SGFGRE 1511
SG GRE
Sbjct: 490 SGNGRE 495
>ref|XP_863966.1| PREDICTED: similar to aldehyde dehydrogenase 1A2 isoform 1 isoform 6
[Canis familiaris].
Length = 496
Score = 315 bits (807), Expect = 8e-86
Identities = 187/486 (38%), Positives = 267/486 (54%), Gaps = 10/486 (2%)
Frame = +3
Query: 84 LRPAPVAAMS---TGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATFTCSGEK 254
L P+P + T FI ++ N G RV PV + PATG + + +
Sbjct: 25 LLPSPTPNLEIKYTKIFINNEWQNSESG-RVFPV--------YNPATGEQVCEVQEADKA 75
Query: 255 EVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSIFEA 425
+++ AVQ A+ AF +W + ER R+L TME++N GK +A
Sbjct: 76 DIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQA 135
Query: 426 -RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACW 602
+D+ + L YYAG A + G I + G F +TR EP+GVC I WN+P + W
Sbjct: 136 FYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAW 195
Query: 603 KSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTGQLLCQHRD 779
K APAL CGN ++ KP+ TPLS L + + EAG PPG+ N++ G G T G + H
Sbjct: 196 KIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIG 255
Query: 780 VAKISFTGSVPTGSKIMEMSA--KGIKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFL 953
+ KI+FTGS ++++ +A +K VTLELGGKSP IIF+D D+ AV+ A F
Sbjct: 256 IDKIAFTGSTEVERELIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFF 315
Query: 954 TQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGF 1133
QG+ C G+R+FV++ I ++F V++ +R +G P T GP I++ +IL
Sbjct: 316 NQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILEL 375
Query: 1134 VKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSF 1313
++ +GAK+ CGG ++G+++ P V +N DDM KEEIFGPV IL F
Sbjct: 376 IQSGVAEGAKLECGGKGLG------RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRF 429
Query: 1314 DTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKK 1493
T EV+ERA ++ FGL A VFT DI +A V + +QAG +I YN + PFGG+K
Sbjct: 430 KTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKM 489
Query: 1494 SGFGRE 1511
SG GRE
Sbjct: 490 SGNGRE 495
>ref|XP_533713.2| PREDICTED: similar to 10-formyltetrahydrofolate dehydrogenase
(10-FTHFDH) (Aldehyde dehydrogenase 1 family member L1)
[Canis familiaris].
Length = 902
Score = 313 bits (803), Expect = 2e-85
Identities = 183/465 (39%), Positives = 268/465 (57%), Gaps = 13/465 (2%)
Frame = +3
Query: 174 VDASG--TEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFK--IWSQKSGMERCRILL 341
VDA G T + P G VI + + +V+ AV AK AF+ +W + S +R R+L
Sbjct: 431 VDAEGAKTYETINPTDGNVICQVSLAQVSDVDKAVAAAKDAFENGLWGKISARDRGRLLY 490
Query: 342 XXXXXXXXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQL--- 509
T+E ++ G A + V +S Q Y+AG + G I +
Sbjct: 491 RLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINHA 550
Query: 510 -PGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLA 686
P + T++EP+GVC + WNYP + WK+A LA GN ++ KP+ TPL+ L A
Sbjct: 551 RPNRNLTLTKKEPIGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFA 610
Query: 687 EIYTEAGVPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPV 860
E+ +AG+P G+ N++ G G+ GQ L H DV KI FTGS G IM+ A +K V
Sbjct: 611 ELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKV 670
Query: 861 TLELGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQ 1040
+LELGGKSPLIIF+DCD+ AV+ + + F +GE C R+FV+ I D+F ++VV++
Sbjct: 671 SLELGGKSPLIIFADCDLSKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDQFVQKVVEE 730
Query: 1041 TQRIKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGY 1220
+++KIG+PL DT GP ++ HL++++ + + E+GA ++CGG VP + G+
Sbjct: 731 VKKMKIGNPLDRDTNHGPQNHQAHLQKLVEYCQHGVEEGATLVCGGH-QVP-----RPGF 784
Query: 1221 YMRPCVLTNCRDDMTCVKEEIFGPVMSILSF-DTEAE-VVERAYDTTFGLAAGVFTRDIQ 1394
+ P V T+ D M KEE FGP+M I F D + + V+ RA T FGLA+GVFTRD+
Sbjct: 785 FFEPTVFTDVEDHMFIAKEESFGPIMIISRFADGDVDTVLSRANATEFGLASGVFTRDLN 844
Query: 1395 RAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENGRVTI 1529
RA V L+AG F+ YN + V PFGG+K+SGFG++ G V +
Sbjct: 845 RALYVSDRLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEVAL 889
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 66,148,985
Number of extensions: 1808642
Number of successful extensions: 5116
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 5029
Number of HSP's successfully gapped: 36
Length of query: 534
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 426
Effective length of database: 15,274,216
Effective search space: 6506816016
Effective search space used: 6506816016
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007421
(1604 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000687.3| 4-trimethylaminobutyraldehyde dehydrogenase [Ho... 924 0.0
Alignment gi|NP_000681.2| aldehyde dehydrogenase, mitochondrial isoform 1... 344 2e-94
Alignment gi|NP_000683.3| aldehyde dehydrogenase X, mitochondrial precurs... 333 2e-91
Alignment gi|NP_001191818.1| aldehyde dehydrogenase, mitochondrial isofor... 325 6e-89
Alignment gi|NP_000680.2| retinal dehydrogenase 1 [Homo sapiens]. 321 1e-87
Alignment gi|NP_003879.2| retinal dehydrogenase 2 isoform 1 [Homo sapiens]. 319 4e-87
Alignment gi|NP_001193826.1| retinal dehydrogenase 2 isoform 4 [Homo sapi... 318 1e-86
Alignment gi|NP_072090.1| aldehyde dehydrogenase family 8 member A1 isofo... 310 2e-84
Alignment gi|NP_036322.2| aldehyde dehydrogenase family 1 member L1 [Homo... 308 9e-84
Alignment gi|NP_001029345.2| aldehyde dehydrogenase family 1 member L2, m... 306 4e-83
>ref|NP_000687.3| 4-trimethylaminobutyraldehyde dehydrogenase [Homo sapiens].
Length = 518
Score = 924 bits (2388), Expect = 0.0
Identities = 455/505 (90%), Positives = 473/505 (93%)
Frame = +3
Query: 36 VFLRAGLAVLSPLLRTLRPAPVAAMSTGTFIVSQPLNYRGGARVDPVDASGTEKAFEPAT 215
+FLRAGLA LSPLLR+LRP+PVAAMSTGTF+VSQPLNYRGGARV+P DASGTEKAFEPAT
Sbjct: 1 MFLRAGLAALSPLLRSLRPSPVAAMSTGTFVVSQPLNYRGGARVEPADASGTEKAFEPAT 60
Query: 216 GRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLXXXXXXXXXXXXXXTMET 395
GRVIATFTCSGEKEVNLAVQ+AKAAFKIWSQKSGMERCRILL TME
Sbjct: 61 GRVIATFTCSGEKEVNLAVQNAKAAFKIWSQKSGMERCRILLEAARIIREREDEIATMEC 120
Query: 396 INNGKSIFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAW 575
INNGKSIFEARLD+DISWQCLEYYAGLA SMAGEHIQLPGGSFGYTRREPLGVCVGIGAW
Sbjct: 121 INNGKSIFEARLDIDISWQCLEYYAGLAASMAGEHIQLPGGSFGYTRREPLGVCVGIGAW 180
Query: 576 NYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQGGATTG 755
NYPFQIA WKSAPALACGNAM+FKPSPFTP+S LLLAEIY+EAGVPPGLFNVVQGGA TG
Sbjct: 181 NYPFQIASWKSAPALACGNAMVFKPSPFTPVSALLLAEIYSEAGVPPGLFNVVQGGAATG 240
Query: 756 QLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMGNAVKGA 935
Q LCQH DVAK+SFTGSVPTG KIMEMSAKGIKPVTLELGGKSPLIIFSDCDM NAVKGA
Sbjct: 241 QFLCQHPDVAKVSFTGSVPTGMKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMNNAVKGA 300
Query: 936 LMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHL 1115
LMANFLTQG+VCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHL
Sbjct: 301 LMANFLTQGQVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHL 360
Query: 1116 ERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPV 1295
ER+LGFVKVAKEQGAKVLCGGD+YVPEDPKLK+GYYMRPCVLTNCRDDMTCVKEEIFGPV
Sbjct: 361 ERVLGFVKVAKEQGAKVLCGGDIYVPEDPKLKDGYYMRPCVLTNCRDDMTCVKEEIFGPV 420
Query: 1296 MSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELP 1475
MSILSFDTEAEV+ERA DTTFGLAAGVFTRDIQRAHRVVAELQAG CFI +YNVSPVELP
Sbjct: 421 MSILSFDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGTCFINNYNVSPVELP 480
Query: 1476 FGGYKKSGFGRENGRVTI*YXITLR 1550
FGGYKKSGFGRENGRVTI Y L+
Sbjct: 481 FGGYKKSGFGRENGRVTIEYYSQLK 505
>ref|NP_000681.2| aldehyde dehydrogenase, mitochondrial isoform 1 precursor [Homo
sapiens].
Length = 517
Score = 344 bits (882), Expect = 2e-94
Identities = 187/443 (42%), Positives = 262/443 (59%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
P+TG VI +++V+ AV+ A+AAF++ W + R R+L
Sbjct: 59 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 118
Query: 378 XXTMETINNGKS-IFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
+ET++NGK + +D+D+ +CL YYAG A G+ I + G F YTR EP+GV
Sbjct: 119 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGV 178
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK PALA GN ++ K + TPL+ L +A + EAG PPG+ N+V
Sbjct: 179 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIV 238
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKI-MEMSAKGIKPVTLELGGKSPLIIFSDC 908
G G T G + H DV K++FTGS G I + + +K VTLELGGKSP II SD
Sbjct: 239 PGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDA 298
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM AV+ A A F QG+ CC G+R FVQ++I D+F E V + + +G+P T
Sbjct: 299 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQ 358
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP ++ ++ILG++ K++GAK+LCGG + GY+++P V + +D MT
Sbjct: 359 GPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTI 412
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
KEEIFGPVM IL F T EVV RA ++T+GLAA VFT+D+ +A+ + LQAG ++
Sbjct: 413 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 472
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
Y+V + PFGGYK SG GRE G
Sbjct: 473 YDVFGAQSPFGGYKMSGSGRELG 495
>ref|NP_000683.3| aldehyde dehydrogenase X, mitochondrial precursor [Homo sapiens].
Length = 517
Score = 333 bits (855), Expect = 2e-91
Identities = 180/443 (40%), Positives = 262/443 (59%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
P TG VI +V+ AV+ A+ AF++ W + ER R+L
Sbjct: 59 PTTGEVIGHVAEGDRADVDRAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVY 118
Query: 378 XXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
++ET++NGK E+ LD+D + Y+AG A G+ I + G F +TR EP+GV
Sbjct: 119 LASLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPVGV 178
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK APALA GN ++ K + TPLS L LA + EAG PPG+ N++
Sbjct: 179 CGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNII 238
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPVTLELGGKSPLIIFSDC 908
G G T G + QH DV K++FTGS G I + + +K VTLELGGKSP I+ +D
Sbjct: 239 TGYGPTAGAAIAQHVDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADA 298
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM +AV+ A F G+ CC G+R FV++ I ++F E V++ ++ K+G+P DT+
Sbjct: 299 DMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQ 358
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP +++ ER+LG++++ +++GAK+LCGG+ + + G++++P V +DDM
Sbjct: 359 GPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFG------ERGFFIKPTVFGGVQDDMRI 412
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
KEEIFGPV + F EVVERA +T +GLAA VFTRD+ +A LQAG ++
Sbjct: 413 AKEEIFGPVQPLFKFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNT 472
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
YN+ PFGG+K+SG GRE G
Sbjct: 473 YNIVTCHTPFGGFKESGNGRELG 495
>ref|NP_001191818.1| aldehyde dehydrogenase, mitochondrial isoform 2 precursor [Homo
sapiens].
Length = 470
Score = 325 bits (834), Expect = 6e-89
Identities = 171/380 (45%), Positives = 235/380 (61%), Gaps = 3/380 (0%)
Frame = +3
Query: 387 METINNGKS-IFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVG 563
+ET++NGK + +D+D+ +CL YYAG A G+ I + G F YTR EP+GVC
Sbjct: 75 LETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQ 134
Query: 564 IGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG- 740
I WN+P + WK PALA GN ++ K + TPL+ L +A + EAG PPG+ N+V G
Sbjct: 135 IIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGF 194
Query: 741 GATTGQLLCQHRDVAKISFTGSVPTGSKI-MEMSAKGIKPVTLELGGKSPLIIFSDCDMG 917
G T G + H DV K++FTGS G I + + +K VTLELGGKSP II SD DM
Sbjct: 195 GPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMD 254
Query: 918 NAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPL 1097
AV+ A A F QG+ CC G+R FVQ++I D+F E V + + +G+P T GP
Sbjct: 255 WAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQ 314
Query: 1098 INRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKE 1277
++ ++ILG++ K++GAK+LCGG + GY+++P V + +D MT KE
Sbjct: 315 VDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKE 368
Query: 1278 EIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNV 1457
EIFGPVM IL F T EVV RA ++T+GLAA VFT+D+ +A+ + LQAG ++ Y+V
Sbjct: 369 EIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV 428
Query: 1458 SPVELPFGGYKKSGFGRENG 1517
+ PFGGYK SG GRE G
Sbjct: 429 FGAQSPFGGYKMSGSGRELG 448
>ref|NP_000680.2| retinal dehydrogenase 1 [Homo sapiens].
Length = 501
Score = 321 bits (822), Expect = 1e-87
Identities = 177/445 (39%), Positives = 257/445 (57%), Gaps = 6/445 (1%)
Frame = +3
Query: 201 FEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXX 371
F PAT + +++V+ AV+ A+ AF+I W ER R+L
Sbjct: 41 FNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDR 100
Query: 372 XXXXTMETINNGKSIFEARL-DVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPL 548
TME++N GK A L D+ + L Y AG A + G I + G F YTR EP+
Sbjct: 101 LLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPI 160
Query: 549 GVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFN 728
GVC I WN+P + WK PAL+CGN ++ KP+ TPL+ L +A + EAG PPG+ N
Sbjct: 161 GVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVN 220
Query: 729 VVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFS 902
+V G G T G + H D+ K++FTGS G I E + K +K VTLELGGKSP I+ +
Sbjct: 221 IVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLA 280
Query: 903 DCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDT 1082
D D+ NAV+ A F QG+ C +R+FV++ I D+F V++ ++ +G+PL
Sbjct: 281 DADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGV 340
Query: 1083 RMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDM 1262
GP I++ ++IL ++ K++GAK+ CGG P +GY+++P V +N D+M
Sbjct: 341 TQGPQIDKEQYDKILDLIESGKKEGAKLECGGG------PWGNKGYFVQPTVFSNVTDEM 394
Query: 1263 TCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI 1442
KEEIFGPV I+ F + +V++RA +T +GL+AGVFT+DI +A + + LQAG ++
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQAGTVWV 454
Query: 1443 XHYNVSPVELPFGGYKKSGFGRENG 1517
Y V + PFGG+K SG GRE G
Sbjct: 455 NCYGVVSAQCPFGGFKMSGNGRELG 479
>ref|NP_003879.2| retinal dehydrogenase 2 isoform 1 [Homo sapiens].
Length = 518
Score = 319 bits (818), Expect = 4e-87
Identities = 189/487 (38%), Positives = 266/487 (54%), Gaps = 9/487 (1%)
Frame = +3
Query: 84 LRPAPVAAMS---TGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATFTCSGEK 254
L P+P + T FI ++ N G RV PV + PATG + + +
Sbjct: 25 LLPSPTPNLEIKYTKIFINNEWQNSESG-RVFPV--------YNPATGEQVCEVQEADKA 75
Query: 255 EVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSIFEA 425
+++ AVQ A+ AF +W + ER R+L TME++N GK +A
Sbjct: 76 DIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQA 135
Query: 426 -RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACW 602
+D+ + YYAG A + G I + G F +TR EP+GVC I WN+P + W
Sbjct: 136 FYVDLQGVIKTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAW 195
Query: 603 KSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTGQLLCQHRD 779
K APAL CGN ++ KP+ TPLS L + + EAG PPG+ N++ G G T G + H
Sbjct: 196 KIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIG 255
Query: 780 VAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLT 956
+ KI+FTGS G I E + + +K VTLELGGKSP IIF+D D+ AV+ A F
Sbjct: 256 IDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFN 315
Query: 957 QGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFV 1136
QG+ C G+R+FV++ I ++F V++ +R +G P T GP I++ +IL +
Sbjct: 316 QGQCCTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELI 375
Query: 1137 KVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFD 1316
+ +GAK+ CGG ++G+++ P V +N DDM KEEIFGPV IL F
Sbjct: 376 QSGVAEGAKLECGGKGLG------RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFK 429
Query: 1317 TEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKS 1496
T EV+ERA ++ FGL A VFT DI +A V + +QAG +I YN + PFGG+K S
Sbjct: 430 TMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMS 489
Query: 1497 GFGRENG 1517
G GRE G
Sbjct: 490 GNGREMG 496
>ref|NP_001193826.1| retinal dehydrogenase 2 isoform 4 [Homo sapiens].
Length = 497
Score = 318 bits (814), Expect = 1e-86
Identities = 177/445 (39%), Positives = 250/445 (56%), Gaps = 6/445 (1%)
Frame = +3
Query: 201 FEPATGRVIATFTCSGEKEVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXX 371
+ PATG + + + +++ AVQ A+ AF +W + ER R+L
Sbjct: 37 YNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDR 96
Query: 372 XXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPL 548
TME++N GK +A +D+ + YYAG A + G I + G F +TR EP+
Sbjct: 97 AVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPI 156
Query: 549 GVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFN 728
GVC I WN+P + WK APAL CGN ++ KP+ TPLS L + + EAG PPG+ N
Sbjct: 157 GVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVIN 216
Query: 729 VVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFS 902
++ G G T G + H + KI+FTGS G I E + + +K VTLELGGKSP IIF+
Sbjct: 217 ILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFA 276
Query: 903 DCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDT 1082
D D+ AV+ A F QG+ C G+R+FV++ I ++F V++ +R +G P T
Sbjct: 277 DADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPFDPTT 336
Query: 1083 RMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDM 1262
GP I++ +IL ++ +GAK+ CGG ++G+++ P V +N DDM
Sbjct: 337 EQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLG------RKGFFIEPTVFSNVTDDM 390
Query: 1263 TCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI 1442
KEEIFGPV IL F T EV+ERA ++ FGL A VFT DI +A V + +QAG +I
Sbjct: 391 RIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWI 450
Query: 1443 XHYNVSPVELPFGGYKKSGFGRENG 1517
YN + PFGG+K SG GRE G
Sbjct: 451 NCYNALNAQSPFGGFKMSGNGREMG 475
>ref|NP_072090.1| aldehyde dehydrogenase family 8 member A1 isoform 1 [Homo sapiens].
Length = 487
Score = 310 bits (795), Expect = 2e-84
Identities = 169/445 (37%), Positives = 260/445 (58%), Gaps = 4/445 (0%)
Frame = +3
Query: 198 AFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLXXXXXXXXXXXX 377
+++P+TG V SG+ E+ AV+ A+ AF WS +S ER R+L
Sbjct: 27 SYDPSTGEVYCRVPNSGKDEIEAAVKAAREAFPSWSSRSPQERSRVLNQVADLLEQSLEE 86
Query: 378 XXTMETINNGKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPG-GSFGYTRREPLG 551
E+ + GK++ AR +D+ S Q ++A + E Q+ G YT R P+G
Sbjct: 87 FAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLGCMHYTVRAPVG 146
Query: 552 VCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNV 731
V I WN P + WK APA+A GN +I KPS T ++ +L ++ +AGVPPG+ N+
Sbjct: 147 VAGLISPWNLPLYLLTWKIAPAMAAGNTVIAKPSELTSVTAWMLCKLLDKAGVPPGVVNI 206
Query: 732 VQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDC 908
V G G G+ L H +V ISFTGS PT +I ++SA K ++LELGGK+P IIF D
Sbjct: 207 VFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSLELGGKNPAIIFEDA 266
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
++ + + ++F QGE+C +R+FVQK I +F + V+ T++ K+G P +
Sbjct: 267 NLDECIPATVRSSFANQGEICLCTSRIFVQKSIYSEFLKRFVEATRKWKVGIPSDPLVSI 326
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDP-KLKEGYYMRPCVLTNCRDDMT 1265
G LI++ HLE++ +VK A +GA++ CG + P + + GY+M P V+T+ +D+
Sbjct: 327 GALISKAHLEKVRSYVKRALAEGAQIWCGEGVDKLSLPARNQAGYFMLPTVITDIKDESC 386
Query: 1266 CVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIX 1445
C+ EEIFGPV ++ FD+E EV+ERA + +GLAA V++ ++ R HRV +LQ+G+ +
Sbjct: 387 CMTEEIFGPVTCVVPFDSEEEVIERANNVKYGLAATVWSSNVGRVHRVAKKLQSGLVWTN 446
Query: 1446 HYNVSPVELPFGGYKKSGFGRENGR 1520
+ + + LPFGG K SG GRE +
Sbjct: 447 CWLIRELNLPFGGMKSSGIGREGAK 471
>ref|NP_036322.2| aldehyde dehydrogenase family 1 member L1 [Homo sapiens].
Length = 902
Score = 308 bits (789), Expect = 9e-84
Identities = 185/466 (39%), Positives = 264/466 (56%), Gaps = 14/466 (3%)
Frame = +3
Query: 174 VDASG--TEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI--WSQKSGMERCRILL 341
VDA G T + P G VI + + +V+ AV AK AF+ W + S +R R++
Sbjct: 431 VDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDRGRLMY 490
Query: 342 XXXXXXXXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQL--- 509
T+E ++ G A + V +S Q Y+AG + G I +
Sbjct: 491 RLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQA 550
Query: 510 -PGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLA 686
P + TR+EP+GVC I WNYP + WK+A LA GN ++ KP+ TPL+ L A
Sbjct: 551 RPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFA 610
Query: 687 EIYTEAGVPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPV 860
E+ +AG+P G+ NV+ G G+ GQ L H DV KI FTGS G IM+ A +K V
Sbjct: 611 ELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKV 670
Query: 861 TLELGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQ 1040
+LELGGKSPLIIF+DCD+ AV+ + + F +GE C R+FV+ I D+F VV++
Sbjct: 671 SLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRRVVEE 730
Query: 1041 TQRIKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGY 1220
+++K+G+PL DT GP + HL +++ + + ++GA ++CGG+ VP + G+
Sbjct: 731 VRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGN-QVP-----RPGF 784
Query: 1221 YMRPCVLTNCRDDMTCVKEEIFGPVMSILSF---DTEAEVVERAYDTTFGLAAGVFTRDI 1391
+ P V T+ D M KEE FGPVM I F D +A V+ RA T FGLA+GVFTRDI
Sbjct: 785 FFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDA-VLSRANATEFGLASGVFTRDI 843
Query: 1392 QRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENGRVTI 1529
+A V +LQAG F+ YN + V PFGG+K+SGFG++ G +
Sbjct: 844 NKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAAL 889
>ref|NP_001029345.2| aldehyde dehydrogenase family 1 member L2, mitochondrial precursor
[Homo sapiens].
Length = 923
Score = 306 bits (784), Expect = 4e-83
Identities = 176/458 (38%), Positives = 257/458 (56%), Gaps = 11/458 (2%)
Frame = +3
Query: 177 DASGTEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI--WSQKSGMERCRILLXXX 350
D T P G I + + +V+ AV AK AF+ W + + ER R++
Sbjct: 455 DDGKTYDTINPTDGSTICKVSYASLADVDKAVAAAKDAFENGEWGRMNARERGRLMYRLA 514
Query: 351 XXXXXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQL----PG 515
T+E +++G A + + +S Q Y+AG + G I + P
Sbjct: 515 DLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPN 574
Query: 516 GSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIY 695
+ +T++EPLGVC I WNYP + WKSA LA GN ++ KP+ TPL+ L AE+
Sbjct: 575 RNLTFTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELS 634
Query: 696 TEAGVPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPVTLE 869
+AG P G+ N++ G G GQ L +H D+ K+ FTGS P G +IM+ A +K V+LE
Sbjct: 635 VKAGFPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLE 694
Query: 870 LGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQR 1049
LGGKSPLIIF+DC++ AV+ + A F +GE C R+FV++ I D+F VV++ ++
Sbjct: 695 LGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKK 754
Query: 1050 IKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMR 1229
+KIGDPL T GP ++ HLE++L + + ++GA ++ GG + G++M
Sbjct: 755 MKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGG------RQVQRPGFFME 808
Query: 1230 PCVLTNCRDDMTCVKEEIFGPVMSILSFDTE--AEVVERAYDTTFGLAAGVFTRDIQRAH 1403
P V T+ D M KEE FGP+M I F V++RA T +GLA+GVFTRDI +A
Sbjct: 809 PTVFTDVEDYMYLAKEESFGPIMVISKFQNGDIDGVLQRANSTEYGLASGVFTRDINKAM 868
Query: 1404 RVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENG 1517
V +L+AG FI YN + V PFGG K+SGFG++ G
Sbjct: 869 YVSEKLEAGTVFINTYNKTDVAAPFGGVKQSGFGKDLG 906
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 65,047,055
Number of extensions: 1792543
Number of successful extensions: 5325
Number of sequences better than 1.0e-05: 36
Number of HSP's gapped: 5207
Number of HSP's successfully gapped: 43
Length of query: 534
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 427
Effective length of database: 14,770,016
Effective search space: 6306796832
Effective search space used: 6306796832
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007421
(1604 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_064377.2| 4-trimethylaminobutyraldehyde dehydrogenase [Mu... 863 0.0
Alignment gi|NP_033786.1| aldehyde dehydrogenase, mitochondrial precursor... 341 1e-93
Alignment gi|NP_036051.1| aldehyde dehydrogenase, cytosolic 1 [Mus muscul... 338 5e-93
Alignment gi|NP_082546.1| aldehyde dehydrogenase X, mitochondrial precurs... 330 2e-90
Alignment gi|NP_038495.2| retinal dehydrogenase 1 [Mus musculus]. 320 2e-87
Alignment gi|NP_033048.2| retinal dehydrogenase 2 [Mus musculus]. 318 8e-87
Alignment gi|NP_081682.1| aldehyde dehydrogenase family 1 member L1 [Mus ... 309 5e-84
Alignment gi|NP_848828.1| aldehyde dehydrogenase family 8 member A1 [Mus ... 307 1e-83
Alignment gi|NP_705771.2| aldehyde dehydrogenase family 1 member L2, mito... 306 4e-83
Alignment gi|NP_444310.3| aldehyde dehydrogenase family 1 member A3 [Mus ... 292 4e-79
>ref|NP_064377.2| 4-trimethylaminobutyraldehyde dehydrogenase [Mus musculus].
Length = 518
Score = 863 bits (2230), Expect = 0.0
Identities = 421/498 (84%), Positives = 452/498 (90%)
Frame = +3
Query: 57 AVLSPLLRTLRPAPVAAMSTGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATF 236
+VL+ LLR R A VAAMSTGTF+VSQPLNYRGGARV+PVDASGTEKAFEPATGRVIATF
Sbjct: 8 SVLTSLLRIHRAAAVAAMSTGTFVVSQPLNYRGGARVEPVDASGTEKAFEPATGRVIATF 67
Query: 237 TCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSI 416
CSGEKEVNLAV++AKAAFK+WS+KSG+ERC++LL T+ETINNGKSI
Sbjct: 68 ACSGEKEVNLAVENAKAAFKLWSKKSGLERCQVLLEAARIIKERKDEIATVETINNGKSI 127
Query: 417 FEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIA 596
FEARLDVD WQCLEYYAGLA SMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIA
Sbjct: 128 FEARLDVDTCWQCLEYYAGLAASMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIA 187
Query: 597 CWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQGGATTGQLLCQHR 776
CWKSAPALACGNAMIFKPSPFTP+S LLLAEIYT+AG PPGLFNVVQGGA TGQ LC HR
Sbjct: 188 CWKSAPALACGNAMIFKPSPFTPVSALLLAEIYTKAGAPPGLFNVVQGGAATGQFLCHHR 247
Query: 777 DVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLT 956
+VAKISFTGSVPTG KIMEMSAKG+KP+TLELGGKSPLIIFSDC+M NAVKGALMANFLT
Sbjct: 248 EVAKISFTGSVPTGVKIMEMSAKGVKPITLELGGKSPLIIFSDCNMENAVKGALMANFLT 307
Query: 957 QGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFV 1136
QG+VCCNGTRVFVQKEI DKF EVVKQTQ+IK+GDPLLEDTRMGPLIN PHLER+LGFV
Sbjct: 308 QGQVCCNGTRVFVQKEIADKFINEVVKQTQKIKLGDPLLEDTRMGPLINAPHLERVLGFV 367
Query: 1137 KVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFD 1316
K+AKEQGA VLCGG++YVPEDPKLK GYYM PC+LTNCRDDMTCVKEEIFGPVMSIL+F
Sbjct: 368 KLAKEQGATVLCGGEVYVPEDPKLKHGYYMTPCILTNCRDDMTCVKEEIFGPVMSILTFG 427
Query: 1317 TEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKS 1496
TEAEV+ERA DTTFGLAAGVFTRDIQRAHRV AELQAG C+I +YNVSPVELPFGGYKKS
Sbjct: 428 TEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVSPVELPFGGYKKS 487
Query: 1497 GFGRENGRVTI*YXITLR 1550
GFGRENGRVTI Y L+
Sbjct: 488 GFGRENGRVTIEYYSQLK 505
>ref|NP_033786.1| aldehyde dehydrogenase, mitochondrial precursor [Mus musculus].
Length = 519
Score = 341 bits (874), Expect = 1e-93
Identities = 186/443 (41%), Positives = 260/443 (58%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
P+TG VI +++V+ AV+ A+AAF++ W + +R R+L
Sbjct: 61 PSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTY 120
Query: 378 XXTMETINNGKS-IFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
+ET++NGK + +D+D+ +CL YYAG A G+ I + G F YTR EP+GV
Sbjct: 121 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGV 180
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK PALA GN ++ K + TPL+ L +A + EAG PPG+ N+V
Sbjct: 181 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIV 240
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKI-MEMSAKGIKPVTLELGGKSPLIIFSDC 908
G G T G + H V K++FTGS G I + + +K VTLELGGKSP II SD
Sbjct: 241 PGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDA 300
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM AV+ A A F QG+ CC G+R FVQ+ + D+F E V + + +G+P T
Sbjct: 301 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQ 360
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP ++ ++ILG++K +++GAK+LCGG GY+++P V + +D MT
Sbjct: 361 GPQVDETQFKKILGYIKSGQQEGAKLLCGG------GAAADRGYFIQPTVFGDVKDGMTI 414
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
KEEIFGPVM IL F T EVV RA D+ +GLAA VFT+D+ +A+ + LQAG +I
Sbjct: 415 AKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINC 474
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
Y+V + PFGGYK SG GRE G
Sbjct: 475 YDVFGAQSPFGGYKMSGSGRELG 497
>ref|NP_036051.1| aldehyde dehydrogenase, cytosolic 1 [Mus musculus].
Length = 501
Score = 338 bits (868), Expect = 5e-93
Identities = 187/443 (42%), Positives = 266/443 (60%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
PAT VI + +V+ AV+ A+ AF+I W ER R+L
Sbjct: 43 PATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLL 102
Query: 378 XXTMETINNGKSIFEARL-DVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
TME++N GK A L DV+IS + L+Y+AG A + G+ I G F YTRREP+GV
Sbjct: 103 LATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQTIPSDGNIFTYTRREPIGV 162
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN P I WK PAL+CGN ++ KP+ TPL+ L +A + EAG PPG+ N+V
Sbjct: 163 CGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIV 222
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAK-GIKPVTLELGGKSPLIIFSDC 908
G G T G + H D+ K+SFTGS G I E + K +K VTLELGGKSP I+F+D
Sbjct: 223 PGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADA 282
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
D+ +AV+ A F QG++C +R+FV++ I D+F V++ ++ +G+PL
Sbjct: 283 DLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYILGNPLNSGINQ 342
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP I++ +ILG ++ K++GAK+ CGG + +G++++P V +N D+M
Sbjct: 343 GPQIDKEQHNKILGLIESGKKEGAKLECGGGRWG------NKGFFVQPTVFSNVTDEMRI 396
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
KEEIFGPV I+ F + +V++RA +TT+GLAAGVFT+D+ +A V + LQAGM ++
Sbjct: 397 AKEEIFGPVQQIMKFKSMDDVIKRANNTTYGLAAGVFTKDLDKAITVSSALQAGMVWVNC 456
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
Y PV+ PFGG+K SG GRE G
Sbjct: 457 YLAVPVQCPFGGFKMSGNGRELG 479
>ref|NP_082546.1| aldehyde dehydrogenase X, mitochondrial precursor [Mus musculus].
Length = 519
Score = 330 bits (846), Expect = 2e-90
Identities = 181/444 (40%), Positives = 263/444 (59%), Gaps = 7/444 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
P TG VI +V+LAV+ A+ AF++ W + ER R+L
Sbjct: 61 PTTGEVIGHVAEGDRADVDLAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVY 120
Query: 378 XXTMETINNGKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
++ET++NGK E+ LD+D + Y+AG A G+ I + G F +TR EP+GV
Sbjct: 121 LASLETLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGV 180
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK APALA GN ++ K + TPLS L LA + EAG PPG+ N++
Sbjct: 181 CGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNII 240
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDC 908
G G T G + QH DV K++FTGS G I + + + +K VTLELGGKSP I+ +D
Sbjct: 241 TGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGESNLKRVTLELGGKSPSIVLADA 300
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM +AV A F G+ CC G+R FV++ I +F E V++ ++ K+G+P DT+
Sbjct: 301 DMEHAVDQCHEALFFNMGQCCCAGSRTFVEESIYREFLERTVEKAKQRKVGNPFELDTQQ 360
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKE-GYYMRPCVLTNCRDDMT 1265
GP +++ ERILG++++ +++GAK+LCGG+ +L E G++++P V + +D M
Sbjct: 361 GPQVDKEQFERILGYIRLGQKEGAKLLCGGE-------RLGERGFFIKPTVFGDVQDGMR 413
Query: 1266 CVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIX 1445
KEEIFGPV + F EV++RA +T +GLAA VFTRD+ +A LQAG ++
Sbjct: 414 IAKEEIFGPVQPLFKFKKIEEVIQRANNTRYGLAAAVFTRDLDKAIYFTQALQAGTVWVN 473
Query: 1446 HYNVSPVELPFGGYKKSGFGRENG 1517
YN+ PFGG+K+SG GRE G
Sbjct: 474 TYNIVTCHTPFGGFKESGNGRELG 497
>ref|NP_038495.2| retinal dehydrogenase 1 [Mus musculus].
Length = 501
Score = 320 bits (821), Expect = 2e-87
Identities = 189/485 (38%), Positives = 276/485 (56%), Gaps = 9/485 (1%)
Frame = +3
Query: 90 PAPVAAMS---TGTFIVSQPLNYRGGARVDPVDASGTEKAFEPATGRVIATFTCSGEKEV 260
PAP+A + T FI ++ N G + PV PAT VI + +V
Sbjct: 10 PAPLADLKIQHTKIFINNEWHNSVSGKKF-PV--------LNPATEEVICHVEEGDKADV 60
Query: 261 NLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKSIFEARL 431
+ AV+ A+ AF+I W ER R+L TME +N GK A L
Sbjct: 61 DKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYL 120
Query: 432 -DVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQIACWKS 608
D+ + L+Y AG A + G+ I G F YTRREP+GVC I WN+P + WK
Sbjct: 121 SDLGGCIKALKYCAGWADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKI 180
Query: 609 APALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTGQLLCQHRDVA 785
PAL+CGN ++ KP+ TPL+ L LA + EAG PPG+ N+V G G T G + H DV
Sbjct: 181 GPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 240
Query: 786 KISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLTQG 962
K++FTGS G I E + K +K VTLELGGKSP I+F+D D+ AV+ A F QG
Sbjct: 241 KVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQG 300
Query: 963 EVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFVKV 1142
+ C +R+FV++ + D+F + V++ ++ +G+PL GP I++ ++IL ++
Sbjct: 301 QCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIES 360
Query: 1143 AKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTE 1322
K++GAK+ CGG + +G++++P V +N D+M KEEIFGPV I+ F +
Sbjct: 361 GKKEGAKLECGGGRWG------NKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSV 414
Query: 1323 AEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGF 1502
+V++RA +TT+GLAAG+FT+D+ +A V + LQAG+ ++ Y + + PFGG+K SG
Sbjct: 415 DDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGN 474
Query: 1503 GRENG 1517
GRE G
Sbjct: 475 GRELG 479
>ref|NP_033048.2| retinal dehydrogenase 2 [Mus musculus].
Length = 518
Score = 318 bits (815), Expect = 8e-87
Identities = 193/501 (38%), Positives = 274/501 (54%), Gaps = 9/501 (1%)
Frame = +3
Query: 42 LRAGLAVLSPLLRTLRPAPVAAMS---TGTFIVSQPLNYRGGARVDPVDASGTEKAFEPA 212
++A A L L+ L P+P + T FI ++ N G RV PV PA
Sbjct: 12 VKADPAALMASLQLL-PSPTPNLEIKYTKIFINNEWQNSESG-RVFPV--------CNPA 61
Query: 213 TGRVIATFTCSGEKEVNLAVQDAKAAFK---IWSQKSGMERCRILLXXXXXXXXXXXXXX 383
TG + + + +++ AVQ A+ AF +W + ER R+L
Sbjct: 62 TGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLA 121
Query: 384 TMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCV 560
TME++N GK +A +D+ + L YYAG A + G I + G F +TR EP+GVC
Sbjct: 122 TMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCG 181
Query: 561 GIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG 740
I WN+P + WK APAL CGN ++ KP+ TPLS L + + EAG PPG+ N++ G
Sbjct: 182 QIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPG 241
Query: 741 -GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDM 914
G T G + H + KI+FTGS G I E + + +K VTLELGGKSP IIF+D D+
Sbjct: 242 YGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADL 301
Query: 915 GNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGP 1094
AV+ A F QG+ C G+R+FV++ I ++F + V++ +R +G P T GP
Sbjct: 302 DYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGP 361
Query: 1095 LINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVK 1274
I++ ++L ++ +GAK+ CGG ++G+++ P V +N DDM K
Sbjct: 362 QIDKKQYNKVLELIQSGVAEGAKLECGGKGLG------RKGFFIEPTVFSNVTDDMRIAK 415
Query: 1275 EEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYN 1454
EEIFGPV IL F T EV+ERA ++ FGL A VFT DI +A V + +QAG +I YN
Sbjct: 416 EEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYN 475
Query: 1455 VSPVELPFGGYKKSGFGRENG 1517
+ PFGG+K SG GRE G
Sbjct: 476 ALNAQSPFGGFKMSGNGREMG 496
>ref|NP_081682.1| aldehyde dehydrogenase family 1 member L1 [Mus musculus].
Length = 902
Score = 309 bits (791), Expect = 5e-84
Identities = 182/466 (39%), Positives = 266/466 (57%), Gaps = 14/466 (3%)
Frame = +3
Query: 174 VDASG--TEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFK--IWSQKSGMERCRILL 341
VDA G T P G VI + + +V+ AV AK AF+ +W + + +R R+L
Sbjct: 431 VDAEGAKTYSTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLY 490
Query: 342 XXXXXXXXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQL--- 509
T+E ++ G A + V +S Q Y+AG + G I +
Sbjct: 491 RLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQA 550
Query: 510 -PGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLA 686
P + T++EP+GVC + WNYP + WK+A LA GN ++ KP+ TPL+ L A
Sbjct: 551 RPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFA 610
Query: 687 EIYTEAGVPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPV 860
E+ +AG+P G+ N++ G G+ GQ L H DV KI FTGS G IM+ A +K V
Sbjct: 611 ELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKV 670
Query: 861 TLELGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQ 1040
+LELGGKSPLIIF+DCD+ AV+ + + F +GE C R+FV+ I D+F ++VV++
Sbjct: 671 SLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDQFVQKVVEE 730
Query: 1041 TQRIKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGY 1220
++KIG+PL DT GP + HL +++ + + ++GA ++CGG+ VP + G+
Sbjct: 731 VGKMKIGNPLDRDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN-QVP-----RPGF 784
Query: 1221 YMRPCVLTNCRDDMTCVKEEIFGPVMSILSF---DTEAEVVERAYDTTFGLAAGVFTRDI 1391
+ +P V T+ D M KEE FGP+M I F D +A V+ RA T FGLA+GVFTRDI
Sbjct: 785 FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDA-VLSRANATEFGLASGVFTRDI 843
Query: 1392 QRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENGRVTI 1529
+A V +LQAG F+ YN + V PFGG+K+SGFG++ G +
Sbjct: 844 NKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAAL 889
>ref|NP_848828.1| aldehyde dehydrogenase family 8 member A1 [Mus musculus].
Length = 487
Score = 307 bits (787), Expect = 1e-83
Identities = 165/445 (37%), Positives = 257/445 (57%), Gaps = 4/445 (0%)
Frame = +3
Query: 198 AFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLXXXXXXXXXXXX 377
+++P+TG V SG++E+ AV+ A+ AF WS +S ER +L
Sbjct: 27 SYDPSTGEVYCKVPNSGKEEIEAAVEAAREAFPAWSSRSPQERSLVLNRLADVLEQSLEE 86
Query: 378 XXTMETINNGKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPG-GSFGYTRREPLG 551
E+ + GK++ AR +D+ S ++A E Q+ G YT R P+G
Sbjct: 87 LAQAESKDQGKTLTLARTMDIPRSVLNFRFFASSNLHHVSECTQMSHLGCMHYTVRTPVG 146
Query: 552 VCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNV 731
+ I WN P + WK APA+A GN +I KPS T ++ + ++ +AGVPPG+ N+
Sbjct: 147 IAGLISPWNLPLYLLTWKIAPAIAAGNTVIAKPSEMTSVTAWMFCKLLDKAGVPPGVINI 206
Query: 732 VQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDC 908
V G G G+ L H +V ISFTGS PT +I ++SA K ++LELGGK+P IIF D
Sbjct: 207 VFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSLELGGKNPAIIFEDA 266
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
++ + + ++F QGE+C +R+FVQ+ I +F + V+ T++ K+G P M
Sbjct: 267 NLEECIPATVRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVEATRKWKVGVPSDPSANM 326
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDP-KLKEGYYMRPCVLTNCRDDMT 1265
G LI++ HLE++ +V A+ +GA++LCG + P + + GY+M P V+T+ +D+
Sbjct: 327 GALISKAHLEKVRSYVLKAQTEGARILCGEGVDQLSLPLRNQAGYFMLPTVITDIKDESR 386
Query: 1266 CVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIX 1445
C+ EEIFGPV ++ FD+E EV+ RA +GLAA V+++D+ R HRV +LQ+G+ +
Sbjct: 387 CMTEEIFGPVTCVVPFDSEEEVITRANSVRYGLAATVWSKDVGRIHRVAKKLQSGLVWTN 446
Query: 1446 HYNVSPVELPFGGYKKSGFGRENGR 1520
+ + + LPFGG K SG GRE +
Sbjct: 447 CWLIRELNLPFGGMKSSGIGREGAK 471
>ref|NP_705771.2| aldehyde dehydrogenase family 1 member L2, mitochondrial [Mus
musculus].
Length = 923
Score = 306 bits (783), Expect = 4e-83
Identities = 180/465 (38%), Positives = 258/465 (55%), Gaps = 11/465 (2%)
Frame = +3
Query: 156 GARVDPVDASGTEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI--WSQKSGMERC 329
G VD D T P G I + + +V+ AV AK AF+ W + + +R
Sbjct: 449 GQFVDAEDGE-TYATVNPTDGTTICRVSYASLADVDRAVAAAKDAFENGEWGRMNARDRG 507
Query: 330 RILLXXXXXXXXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQ 506
R++ T+E +++G A + + +S Q Y+AG + G I
Sbjct: 508 RLMYRLADLMEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIP 567
Query: 507 L----PGGSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSV 674
+ P + +T++EPLG C I WNYP + WKSA LA GN ++ KP+ TPL+
Sbjct: 568 INQARPNYNLTFTKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTA 627
Query: 675 LLLAEIYTEAGVPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KG 848
L AE+ +AG P G+ N++ G G GQ L QH D+ K+ FTGS G +IM+ A
Sbjct: 628 LKFAELTVKAGFPKGVINIIPGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCAVSN 687
Query: 849 IKPVTLELGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEE 1028
+K V+LELGGKSPLIIFSDCD+ AV+ + A F +GE C R+FV++ I D+F
Sbjct: 688 LKKVSLELGGKSPLIIFSDCDLEKAVRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTR 747
Query: 1029 VVKQTQRIKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKL 1208
VV++ +++KIGDPL T GP +R HLE++L + + ++GA ++ GG
Sbjct: 748 VVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLVYGG------RQVQ 801
Query: 1209 KEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSILSFDTE--AEVVERAYDTTFGLAAGVFT 1382
+ G++M P V T D M KEE FGP+M I F V++RA +T +GLA+GVFT
Sbjct: 802 RPGFFMEPTVFTGVEDHMYLAKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFT 861
Query: 1383 RDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENG 1517
RDI +A V +L+AG FI YN + V PFGG K+SGFG++ G
Sbjct: 862 RDINKAMYVSDKLEAGTVFINTYNKTDVAAPFGGMKQSGFGKDLG 906
>ref|NP_444310.3| aldehyde dehydrogenase family 1 member A3 [Mus musculus].
Length = 512
Score = 292 bits (748), Expect = 4e-79
Identities = 168/459 (36%), Positives = 254/459 (55%), Gaps = 17/459 (3%)
Frame = +3
Query: 204 EPATGRVIATFTCS----------GEK-EVNLAVQDAKAAFKI---WSQKSGMERCRILL 341
E +GR AT+ S G+K +V+ AV+ A+AAF+ W + + R ++L
Sbjct: 42 ESKSGRKFATYNPSTLEKICEVEEGDKPDVDKAVEAAQAAFQRGSPWRRLDALSRGQLLH 101
Query: 342 XXXXXXXXXXXXXXTMETINNGKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPGG 518
T+ET++ GK A +D++ + Y+AG A + G I
Sbjct: 102 QLADLVERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRTIPTDDN 161
Query: 519 SFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYT 698
+TR EP+GVC I WN+P + WK APAL CGN ++ KP+ TPL+ L LA +
Sbjct: 162 VVCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIK 221
Query: 699 EAGVPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAK-GIKPVTLEL 872
E G PPG+ N+V G G T G + H + KI+FTGS G + E +++ +K VTLEL
Sbjct: 222 EVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVTLEL 281
Query: 873 GGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRI 1052
GGK+P I+ +D D+ AV+ A F QG+ C +RVFV++++ +F V+ ++
Sbjct: 282 GGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKR 341
Query: 1053 KIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRP 1232
+GDP T GP I++ ++IL ++ K++GAK+ CGG ED G +++P
Sbjct: 342 PVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGS--AMED----RGLFIKP 395
Query: 1233 CVLTNCRDDMTCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVV 1412
V ++ D+M KEEIFGPV IL F EV++RA T +GL A VFT+++ +A ++
Sbjct: 396 TVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLA 455
Query: 1413 AELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENGRVTI 1529
A L++G +I YN + PFGG+K SG GRE G +
Sbjct: 456 AALESGTVWINCYNAFYAQAPFGGFKMSGNGRELGEYAL 494
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 55,210,452
Number of extensions: 1506778
Number of successful extensions: 4244
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 4136
Number of HSP's successfully gapped: 25
Length of query: 534
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 428
Effective length of database: 12,433,743
Effective search space: 5321642004
Effective search space used: 5321642004
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007421
(1604 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001924895.1| PREDICTED: 4-trimethylaminobutyraldehyde deh... 993 0.0
Alignment gi|XP_003132963.2| PREDICTED: aldehyde dehydrogenase, mitochond... 340 1e-93
Alignment gi|NP_001038076.1| aldehyde dehydrogenase, mitochondrial precur... 340 1e-93
Alignment gi|XP_003353634.1| PREDICTED: aldehyde dehydrogenase X, mitocho... 337 1e-92
Alignment gi|XP_003353633.1| PREDICTED: aldehyde dehydrogenase X, mitocho... 337 1e-92
Alignment gi|XP_003359162.1| PREDICTED: aldehyde dehydrogenase, mitochond... 322 3e-88
Alignment gi|XP_001926622.3| PREDICTED: aldehyde dehydrogenase family 1 m... 309 2e-84
Alignment gi|XP_001925921.3| PREDICTED: aldehyde dehydrogenase family 1 m... 287 1e-77
Alignment gi|XP_003121238.2| PREDICTED: aldehyde dehydrogenase family 8 m... 282 4e-76
Alignment gi|XP_001929208.1| PREDICTED: methylmalonate-semialdehyde dehyd... 189 3e-48
>ref|XP_001924895.1| PREDICTED: 4-trimethylaminobutyraldehyde dehydrogenase [Sus scrofa].
Length = 596
Score = 993 bits (2567), Expect = 0.0
Identities = 494/516 (95%), Positives = 496/516 (96%)
Frame = +3
Query: 3 RPLNWCPRLPRVFLRAGLAVLSPLLRTLRPAPVAAMSTGTFIVSQPLNYRGGARVDPVDA 182
RPLNWCPRLPRVFLRAGLAVLSPLLRTLRPAPVAAMSTGTFIVSQPLNYRGGARVDPVDA
Sbjct: 68 RPLNWCPRLPRVFLRAGLAVLSPLLRTLRPAPVAAMSTGTFIVSQPLNYRGGARVDPVDA 127
Query: 183 SGTEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLXXXXXXX 362
SGTEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILL
Sbjct: 128 SGTEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLEAARIIR 187
Query: 363 XXXXXXXTMETINNGKSIFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRRE 542
TMETINNGKSIFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRRE
Sbjct: 188 ERKEEIATMETINNGKSIFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRRE 247
Query: 543 PLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGL 722
PLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGL
Sbjct: 248 PLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGL 307
Query: 723 FNVVQGGATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFS 902
FNVVQGGATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFS
Sbjct: 308 FNVVQGGATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFS 367
Query: 903 DCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDT 1082
DCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDT
Sbjct: 368 DCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDT 427
Query: 1083 RMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDM 1262
RMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDM
Sbjct: 428 RMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDM 487
Query: 1263 TCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI 1442
TCVKEEIFGPVMSILSFDTEAEVVERA DTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI
Sbjct: 488 TCVKEEIFGPVMSILSFDTEAEVVERANDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFI 547
Query: 1443 XHYNVSPVELPFGGYKKSGFGRENGRVTI*YXITLR 1550
+YNVSPVELPFGGYKKSGFGRENGRVTI Y L+
Sbjct: 548 NNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLK 583
>ref|XP_003132963.2| PREDICTED: aldehyde dehydrogenase, mitochondrial-like isoform 1 [Sus
scrofa].
Length = 521
Score = 340 bits (873), Expect = 1e-93
Identities = 188/443 (42%), Positives = 261/443 (58%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
P+TG VI +++V+ AV+ A+AAF++ W + +R R+L
Sbjct: 63 PSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSPWRRLDASDRGRLLNRLADLIERDRTY 122
Query: 378 XXTMETINNGKS-IFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
+ET++NGK + +D+D+ +CL YYAG A G+ + + G F YTR EP+GV
Sbjct: 123 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGV 182
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK PALA GN ++ K S TPL+ L +A + EAG PPG+ N+V
Sbjct: 183 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIV 242
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDC 908
G G T G + H DV K++FTGS G I + K +K VTLELGGKSP II SD
Sbjct: 243 PGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDA 302
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM AV+ A A F QG+ CC G+R FVQ++I +F E V + + +G+P T
Sbjct: 303 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQ 362
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP I+ ++ILG++K KE+GAK+LCGG GY+++P V + +D MT
Sbjct: 363 GPQIDETQFKKILGYIKSGKEEGAKLLCGG------GAAADRGYFIQPTVFGDVQDGMTI 416
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
KEEIFGPVM IL F T EV+ RA ++ +GLAA VFT+D+ +A+ + LQAG ++
Sbjct: 417 AKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 476
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
Y+V + PFGGYK SG GRE G
Sbjct: 477 YDVFGAQSPFGGYKLSGSGRELG 499
>ref|NP_001038076.1| aldehyde dehydrogenase, mitochondrial precursor [Sus scrofa].
Length = 521
Score = 340 bits (873), Expect = 1e-93
Identities = 188/443 (42%), Positives = 261/443 (58%), Gaps = 6/443 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXX 377
P+TG VI +++V+ AV+ A+AAF++ W + +R R+L
Sbjct: 63 PSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSPWRRLDASDRGRLLNRLADLIERDRTY 122
Query: 378 XXTMETINNGKS-IFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGV 554
+ET++NGK + +D+D+ +CL YYAG A G+ + + G F YTR EP+GV
Sbjct: 123 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGV 182
Query: 555 CVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVV 734
C I WN+P + WK PALA GN ++ K S TPL+ L +A + EAG PPG+ N+V
Sbjct: 183 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIV 242
Query: 735 QG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDC 908
G G T G + H DV K++FTGS G I + K +K VTLELGGKSP II SD
Sbjct: 243 PGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDA 302
Query: 909 DMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRM 1088
DM AV+ A A F QG+ CC G+R FVQ++I +F E V + + +G+P T
Sbjct: 303 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQ 362
Query: 1089 GPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTC 1268
GP I+ ++ILG++K KE+GAK+LCGG GY+++P V + +D MT
Sbjct: 363 GPQIDETQFKKILGYIKSGKEEGAKLLCGG------GAAADRGYFIQPTVFGDVQDGMTI 416
Query: 1269 VKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXH 1448
KEEIFGPVM IL F T EV+ RA ++ +GLAA VFT+D+ +A+ + LQAG ++
Sbjct: 417 AKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNC 476
Query: 1449 YNVSPVELPFGGYKKSGFGRENG 1517
Y+V + PFGGYK SG GRE G
Sbjct: 477 YDVFGAQSPFGGYKLSGSGRELG 499
>ref|XP_003353634.1| PREDICTED: aldehyde dehydrogenase X, mitochondrial [Sus scrofa].
Length = 517
Score = 337 bits (864), Expect = 1e-92
Identities = 181/449 (40%), Positives = 263/449 (58%), Gaps = 6/449 (1%)
Frame = +3
Query: 189 TEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXX 359
T + P TG VI + +V+ AV+ A+ AF++ W + ER R+L
Sbjct: 53 TFQTVNPTTGEVIGHVAEGDQADVDRAVKAAREAFRLGSPWRRMDASERGRLLNRLADLV 112
Query: 360 XXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTR 536
++ET++NGK E+ LD+D + Y+AG A G+ I + G F +TR
Sbjct: 113 ERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTR 172
Query: 537 REPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPP 716
EP+GVC I WN+P + WK APALA GN ++ K + TPLS L LA + E G PP
Sbjct: 173 HEPVGVCGQIIPWNFPLVMQAWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEVGFPP 232
Query: 717 GLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPVTLELGGKSPL 890
G+ N++ G G T G + H DV K++FTGS G I + + +K VTLELGGKSP
Sbjct: 233 GVVNILTGYGPTAGTAIAHHMDVNKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPS 292
Query: 891 IIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPL 1070
I+ +D DM +AV+ A F G+ CC G+R FV++ I D+F E V++ +R K+G+P
Sbjct: 293 IVLADADMDHAVEQCHEALFFNMGQCCCAGSRTFVEESIYDEFLERTVEKAKRRKVGNPF 352
Query: 1071 LEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNC 1250
DT+ GP +N+ ERILG++++ +++GAK+LCGG+ + + G++++P V
Sbjct: 353 ELDTQQGPQVNKEQFERILGYIQLGQKEGAKLLCGGERFG------ERGFFIKPTVFGGV 406
Query: 1251 RDDMTCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAG 1430
+DDM KEEIFGPV + F EV+ERA +T +GLAA VFT+D+ +A LQAG
Sbjct: 407 QDDMRIAKEEIFGPVQPLFKFKRIEEVIERANNTRYGLAAAVFTQDLDKAMYFTQALQAG 466
Query: 1431 MCFIXHYNVSPVELPFGGYKKSGFGRENG 1517
++ YN+ PFGG+K+SG GRE G
Sbjct: 467 TVWVNTYNIVTCHTPFGGFKESGNGRELG 495
>ref|XP_003353633.1| PREDICTED: aldehyde dehydrogenase X, mitochondrial-like [Sus scrofa].
Length = 517
Score = 337 bits (864), Expect = 1e-92
Identities = 181/449 (40%), Positives = 263/449 (58%), Gaps = 6/449 (1%)
Frame = +3
Query: 189 TEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXX 359
T + P TG VI + +V+ AV+ A+ AF++ W + ER R+L
Sbjct: 53 TFQTVNPTTGEVIGHVAEGDQADVDRAVKAAREAFRLGSPWRRMDASERGRLLNRLADLV 112
Query: 360 XXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTR 536
++ET++NGK E+ LD+D + Y+AG A G+ I + G F +TR
Sbjct: 113 ERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTR 172
Query: 537 REPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPP 716
EP+GVC I WN+P + WK APALA GN ++ K + TPLS L LA + E G PP
Sbjct: 173 HEPVGVCGQIIPWNFPLVMQAWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEVGFPP 232
Query: 717 GLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPVTLELGGKSPL 890
G+ N++ G G T G + H DV K++FTGS G I + + +K VTLELGGKSP
Sbjct: 233 GVVNILTGYGPTAGTAIAHHMDVNKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPS 292
Query: 891 IIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPL 1070
I+ +D DM +AV+ A F G+ CC G+R FV++ I D+F E V++ +R K+G+P
Sbjct: 293 IVLADADMDHAVEQCHEALFFNMGQCCCAGSRTFVEESIYDEFLERTVEKAKRRKVGNPF 352
Query: 1071 LEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNC 1250
DT+ GP +N+ ERILG++++ +++GAK+LCGG+ + + G++++P V
Sbjct: 353 ELDTQQGPQVNKEQFERILGYIQLGQKEGAKLLCGGERFG------ERGFFIKPTVFGGV 406
Query: 1251 RDDMTCVKEEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAG 1430
+DDM KEEIFGPV + F EV+ERA +T +GLAA VFT+D+ +A LQAG
Sbjct: 407 QDDMRIAKEEIFGPVQPLFKFKRIEEVIERANNTRYGLAAAVFTQDLDKAMYFTQALQAG 466
Query: 1431 MCFIXHYNVSPVELPFGGYKKSGFGRENG 1517
++ YN+ PFGG+K+SG GRE G
Sbjct: 467 TVWVNTYNIVTCHTPFGGFKESGNGRELG 495
>ref|XP_003359162.1| PREDICTED: aldehyde dehydrogenase, mitochondrial-like isoform 2 [Sus
scrofa].
Length = 474
Score = 322 bits (826), Expect = 3e-88
Identities = 172/380 (45%), Positives = 233/380 (61%), Gaps = 3/380 (0%)
Frame = +3
Query: 387 METINNGKS-IFEARLDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVG 563
+ET++NGK + +D+D+ +CL YYAG A G+ + + G F YTR EP+GVC
Sbjct: 79 LETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQ 138
Query: 564 IGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG- 740
I WN+P + WK PALA GN ++ K S TPL+ L +A + EAG PPG+ N+V G
Sbjct: 139 IIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGY 198
Query: 741 GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKG-IKPVTLELGGKSPLIIFSDCDMG 917
G T G + H DV K++FTGS G I + K +K VTLELGGKSP II SD DM
Sbjct: 199 GPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMD 258
Query: 918 NAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPL 1097
AV+ A A F QG+ CC G+R FVQ++I +F E V + + +G+P T GP
Sbjct: 259 WAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQ 318
Query: 1098 INRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKE 1277
I+ ++ILG++K KE+GAK+LCGG GY+++P V + +D MT KE
Sbjct: 319 IDETQFKKILGYIKSGKEEGAKLLCGG------GAAADRGYFIQPTVFGDVQDGMTIAKE 372
Query: 1278 EIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNV 1457
EIFGPVM IL F T EV+ RA ++ +GLAA VFT+D+ +A+ + LQAG ++ Y+V
Sbjct: 373 EIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV 432
Query: 1458 SPVELPFGGYKKSGFGRENG 1517
+ PFGGYK SG GRE G
Sbjct: 433 FGAQSPFGGYKLSGSGRELG 452
>ref|XP_001926622.3| PREDICTED: aldehyde dehydrogenase family 1 member L2, mitochondrial
[Sus scrofa].
Length = 923
Score = 309 bits (792), Expect = 2e-84
Identities = 176/459 (38%), Positives = 262/459 (57%), Gaps = 12/459 (2%)
Frame = +3
Query: 177 DASGTEKAFEPATGRVIATFTCSGEKEVNLAVQDAKAAFKI--WSQKSGMERCRILLXXX 350
D T P G +I + + +V+ AV AK AF+ W + + ER R++
Sbjct: 455 DDGKTYDTINPTDGSIICKVSYASLVDVDKAVAAAKDAFENGEWGRMNARERGRLMYRLA 514
Query: 351 XXXXXXXXXXXTMETINNGKSIFEA-RLDVDISWQCLEYYAGLAGSMAGEHIQL----PG 515
T+E +++G A + + +S Q Y+AG + G I + P
Sbjct: 515 DLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPN 574
Query: 516 GSFGYTRREPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIY 695
+ +T++EP+GVC I WNYP + WKSA LA GN ++ KP+ TPL+ L AE+
Sbjct: 575 RNLTFTKKEPIGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELS 634
Query: 696 TEAGVPPGLFNVVQG-GATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSA-KGIKPVTLE 869
+AG P G+ N++ G G GQ L +H D+ K+ FTGS P G +IM+ A +K V+LE
Sbjct: 635 VKAGFPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLE 694
Query: 870 LGGKSPLIIFSDCDMGNAVKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQR 1049
LGGKSPL+IF+DC++ AV+ + A F +GE C R+FV++ I D+F VV++ ++
Sbjct: 695 LGGKSPLLIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKK 754
Query: 1050 IKIGDPLLEDTRMGPLINRPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMR 1229
+KIGDPL T GP ++ HLE++L + + ++GA ++ GG + G++M
Sbjct: 755 MKIGDPLDRSTDHGPQNHKAHLEKLLQYCEAGVKEGATLVYGG------RQVQRPGFFME 808
Query: 1230 PCVLTNCRDDMTCVKEEIFGPVMSILSF---DTEAEVVERAYDTTFGLAAGVFTRDIQRA 1400
P V T+ D M KEE FGP+M I F D + V+ERA +T +GLA+GVFTRDI +A
Sbjct: 809 PTVFTDVEDHMYLAKEESFGPIMVISKFRNGDIDG-VLERANNTEYGLASGVFTRDINKA 867
Query: 1401 HRVVAELQAGMCFIXHYNVSPVELPFGGYKKSGFGRENG 1517
V +L+AG FI YN + V PFGG+K+SGFG++ G
Sbjct: 868 MYVSEKLEAGTVFINTYNKTDVAAPFGGFKQSGFGKDLG 906
>ref|XP_001925921.3| PREDICTED: aldehyde dehydrogenase family 1 member A3, partial [Sus
scrofa].
Length = 655
Score = 287 bits (734), Expect = 1e-77
Identities = 161/435 (37%), Positives = 244/435 (56%), Gaps = 7/435 (1%)
Frame = +3
Query: 246 GEK-EVNLAVQDAKAAFKI---WSQKSGMERCRILLXXXXXXXXXXXXXXTMETINNGKS 413
G+K +V+ AV+ A+AAF+ W + + R R+L T+ET++ GK
Sbjct: 209 GDKPDVDKAVEAAQAAFQRGSPWRRLDALSRGRLLHQLADLVERDRTILATLETMDTGKP 268
Query: 414 IFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNYPFQ 590
A +D++ + L Y+AG A + G+ I +TR EP+GVC I WN+P
Sbjct: 269 FLHAFFIDLEGCIKTLRYFAGWADKIQGKTIPTDDNVVCFTRHEPIGVCGAITPWNFPLL 328
Query: 591 IACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTGQLLC 767
+ WK APAL CGN ++ KP+ TPL+ L L + E G PPG+ N+V G G T G +
Sbjct: 329 MLVWKLAPALCCGNTVVVKPAEQTPLTALHLGSLIREVGFPPGVVNIVPGFGPTVGAAIS 388
Query: 768 QHRDVAKISFTGSVPTGSKIMEMSAK-GIKPVTLELGGKSPLIIFSDCDMGNAVKGALMA 944
H + KI+FTGS G + E +++ +K VTLELGGK+P I+ +D D+ AV+ A
Sbjct: 389 SHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQG 448
Query: 945 NFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHLERI 1124
F QG+ C +RVFV++++ +F + V+ ++ +GDP T GP I++ +I
Sbjct: 449 VFFNQGQCCTAASRVFVEEQVYSEFVKRSVEYAKKRPVGDPFDVRTEQGPQIDQKQFNKI 508
Query: 1125 LGFVKVAKEQGAKVLCGGDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIFGPVMSI 1304
L ++ K++GAK+ CGG ED G +++P V + D M KEEIFGPV I
Sbjct: 509 LDLIESGKKEGAKLECGGS--AMED----RGLFIKPTVFSEVTDTMRIAKEEIFGPVQPI 562
Query: 1305 LSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPVELPFGG 1484
L F EV++RA +GL A VFT+++ +A ++ + L++G +I YN + PFGG
Sbjct: 563 LKFKNIEEVIKRANSLEYGLTAAVFTKNLDKALKLASALESGTVWINCYNAIYAQAPFGG 622
Query: 1485 YKKSGFGRENGRVTI 1529
+K SG GRE G +
Sbjct: 623 FKMSGNGRELGEYAL 637
>ref|XP_003121238.2| PREDICTED: aldehyde dehydrogenase family 8 member A1-like [Sus
scrofa].
Length = 483
Score = 282 bits (721), Expect = 4e-76
Identities = 151/378 (39%), Positives = 229/378 (60%), Gaps = 6/378 (1%)
Frame = +3
Query: 405 GKSIFEAR-LDVDISWQCLEYYAGLAGSMAGEHIQLPG-GSFGYTRREPLGVCVGIGAWN 578
GK+I AR +D+ S Q ++A E Q+ G YT R P+G+ I WN
Sbjct: 92 GKTITLARTMDIPRSVQNFRFFASSILHHTSECTQMDHLGCLHYTVRTPVGIAGLISPWN 151
Query: 579 YPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQG-GATTG 755
P + WK APA+A GN +I KPS T ++ ++ ++ +AGVPPG+ N+V G G G
Sbjct: 152 LPLYLLTWKIAPAIAAGNTVIAKPSELTSVTAWMMCKLLEKAGVPPGVVNIVFGTGPRAG 211
Query: 756 QLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMGNAVKGA 935
+ L H +V ISFTGS PT +I ++SA K ++LELGGK+P IIF D ++ V
Sbjct: 212 EALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSLELGGKNPAIIFEDANLEECVPTT 271
Query: 936 LMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLINRPHL 1115
+ ++F QGE+C +R+FVQ+ I +F + V T+ K+G P MG LI++ HL
Sbjct: 272 VRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVDATRMWKVGIPSDPSASMGALISKAHL 331
Query: 1116 ERILGFVKVAKEQGAKVLCG---GDLYVPEDPKLKEGYYMRPCVLTNCRDDMTCVKEEIF 1286
E++ ++K A+ +GA++LCG L +P P+ + GY+M P V+T+ +D+ C+KEEIF
Sbjct: 332 EKVRSYIKKARLEGAQILCGEGVDKLNLP--PRNQGGYFMLPTVITDIKDESCCMKEEIF 389
Query: 1287 GPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYNVSPV 1466
GPV ++ FD+E EV++RA +GLAA V++ ++ R HRV +LQ+G+ + + + +
Sbjct: 390 GPVTCVVPFDSEEEVIQRANSVKYGLAATVWSGNVGRVHRVAKKLQSGLVWTNCWLIREL 449
Query: 1467 ELPFGGYKKSGFGRENGR 1520
LPFGG K SG GRE +
Sbjct: 450 NLPFGGMKSSGVGREGAK 467
>ref|XP_001929208.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial [Sus scrofa].
Length = 533
Score = 189 bits (481), Expect = 3e-48
Identities = 128/444 (28%), Positives = 208/444 (46%), Gaps = 8/444 (1%)
Frame = +3
Query: 207 PATGRVIATFTCSGEKEVNLAVQDAKAAFKIWSQKSGMERCRILLXXXXXXXXXXXXXXT 386
PAT +I + + E++ AV K AF W+ S + R ++LL
Sbjct: 60 PATNELIGRVPQATKAEMDAAVSSCKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIAK 119
Query: 387 METINNGKSIFEARLDVDISWQCLEYYAGLAGSMAGEHI-QLPGGSFGYTRREPLGVCVG 563
+ T+ GK++ +A DV Q +E+ + M GE + + Y+ R PLGVC G
Sbjct: 120 LITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAG 179
Query: 564 IGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPLSVLLLAEIYTEAGVPPGLFNVVQGG 743
I +N+P I W A+ CGN + KPS P + +LLA++ ++G P G NV+ G
Sbjct: 180 IAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNVIHGQ 239
Query: 744 ATTGQLLCQHRDVAKISFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMGNA 923
+C H D+ ISF GS G I E ++ K V +G K+ ++ D + N
Sbjct: 240 HEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENT 299
Query: 924 VKGALMANFLTQGEVCCNGTRVFVQKEILDKFTEEVVKQTQRIKIGDPLLEDTRMGPLIN 1103
+ + A F G+ C + + E K+ E+V++ + +++ +GPLI+
Sbjct: 300 LNQLVGAAFGAAGQRCMALSTAILVGE-AKKWLPELVERAKNLRVNAGDQPGADLGPLIS 358
Query: 1104 RPHLERILGFVKVAKEQGAKVLCGGDLYVPEDPKLK---EGYYMRPCVLTNCRDDMTCVK 1274
ER+ + ++GA +L G + K+K G ++ P +++N + +MTC K
Sbjct: 359 PQAKERVCNLIDSGTKEGASILLDG-----RNIKVKGYENGNFVGPTIISNVKPNMTCYK 413
Query: 1275 EEIFGPVMSILSFDTEAEVVERAYDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFIXHYN 1454
EEIFGPV+ +L DT E ++ D +G +FT + A + + G + N
Sbjct: 414 EEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVGV---N 470
Query: 1455 VS-PVELP---FGGYKKSGFGREN 1514
V PV LP F G + S G N
Sbjct: 471 VPIPVPLPMFSFTGSRSSFRGDTN 494
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 40,780,802
Number of extensions: 1128745
Number of successful extensions: 3246
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 3192
Number of HSP's successfully gapped: 24
Length of query: 534
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 430
Effective length of database: 8,754,644
Effective search space: 3764496920
Effective search space used: 3764496920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007421
(1604 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr04 424 e-116
>Sscrofa_Chr04
|| Length = 143465943
Score = 424 bits (214), Expect = e-116
Identities = 217/218 (99%)
Strand = Plus / Plus
Query: 1 ctcggccccttaactggtgcccgcgcctccctcgcgtgtttctccgagctggcctagccg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 92686123 ctcggccccttaactggtgcccacgcctccctcgcgtgtttctccgagctggcctagccg 92686182
Query: 61 ttctctctccgcttctccgcactctccggcctgctccggtcgctgcgatgagcactggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92686183 ttctctctccgcttctccgcactctccggcctgctccggtcgctgcgatgagcactggca 92686242
Query: 121 ccttcatcgtgtcacagccacttaattaccgcggcggggcccgcgtggatccggtggacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92686243 ccttcatcgtgtcacagccacttaattaccgcggcggggcccgcgtggatccggtggacg 92686302
Query: 181 cctccggcaccgagaaggcgttcgagccggcaaccggt 218
||||||||||||||||||||||||||||||||||||||
Sbjct: 92686303 cctccggcaccgagaaggcgttcgagccggcaaccggt 92686340
Score = 392 bits (198), Expect = e-106
Identities = 198/198 (100%)
Strand = Plus / Plus
Query: 627 ggtaatgccatgatctttaaaccttctcccttcacgcctctgtctgtcttgctgctggcc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92697418 ggtaatgccatgatctttaaaccttctcccttcacgcctctgtctgtcttgctgctggcc 92697477
Query: 687 gaaatctatactgaggctggcgttcctcctgggcttttcaacgtggtgcagggaggggcc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92697478 gaaatctatactgaggctggcgttcctcctgggcttttcaacgtggtgcagggaggggcc 92697537
Query: 747 accacaggccagcttctgtgtcagcatcgtgatgtggccaaaatctccttcactggaagt 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92697538 accacaggccagcttctgtgtcagcatcgtgatgtggccaaaatctccttcactggaagt 92697597
Query: 807 gtgcccaccggctcaaag 824
||||||||||||||||||
Sbjct: 92697598 gtgcccaccggctcaaag 92697615
Score = 381 bits (192), Expect = e-103
Identities = 192/192 (100%)
Strand = Plus / Plus
Query: 964 aggtttgttgtaatggtacaagggtatttgtgcaaaaggaaattcttgataaatttacag 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92705518 aggtttgttgtaatggtacaagggtatttgtgcaaaaggaaattcttgataaatttacag 92705577
Query: 1024 aggaagtagtgaaacagacccaaaggataaaaattggagatccccttctggaagatacaa 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92705578 aggaagtagtgaaacagacccaaaggataaaaattggagatccccttctggaagatacaa 92705637
Query: 1084 ggatgggtcccctgatcaaccgaccacatctggagcgaatccttgggtttgttaaagtgg 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92705638 ggatgggtcccctgatcaaccgaccacatctggagcgaatccttgggtttgttaaagtgg 92705697
Query: 1144 cgaaggaacagg 1155
||||||||||||
Sbjct: 92705698 cgaaggaacagg 92705709
Score = 293 bits (148), Expect = 2e-76
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 216 ggtcgagtgatagctactttcacatgttcaggagaaaaggaagtaaatttggctgttcaa 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92688331 ggtcgagtgatagctactttcacatgttcaggagaaaaggaagtaaatttggctgttcaa 92688390
Query: 276 gatgcaaaggctgcctttaaaatatggagccagaaatctggcatggagcgttgccgaatt 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92688391 gatgcaaaggctgcctttaaaatatggagccagaaatctggcatggagcgttgccgaatt 92688450
Query: 336 cttttggaggctgccaggataataaggg 363
||||||||||||||||||||||||||||
Sbjct: 92688451 cttttggaggctgccaggataataaggg 92688478
Score = 289 bits (146), Expect = 2e-75
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 822 aagatcatggagatgtcagctaaaggaatcaaacctgtgaccttggaacttggaggcaaa 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92698282 aagatcatggagatgtcagctaaaggaatcaaacctgtgaccttggaacttggaggcaaa 92698341
Query: 882 tctccactgatcatcttctcagattgtgacatggggaatgcggtgaagggggcgctgatg 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92698342 tctccactgatcatcttctcagattgtgacatggggaatgcggtgaagggggcgctgatg 92698401
Query: 942 gccaacttcctcacgcaaggcgaggt 967
||||||||||||||||||||||||||
Sbjct: 92698402 gccaacttcctcacgcaaggcgaggt 92698427
Score = 278 bits (140), Expect = 9e-72
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 492 ggagagcacattcagctccctggcggttcctttggttacaccagaagagagccactgggg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92695831 ggagagcacattcagctccctggcggttcctttggttacaccagaagagagccactgggg 92695890
Query: 552 gtgtgtgtgggaattggagcgtggaactacccctttcagattgcctgctggaagtcggct 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92695891 gtgtgtgtgggaattggagcgtggaactacccctttcagattgcctgctggaagtcggct 92695950
Query: 612 ccagcgctggcctgtggtaa 631
||||||||||||||||||||
Sbjct: 92695951 ccagcgctggcctgtggtaa 92695970
Score = 276 bits (139), Expect = 4e-71
Identities = 142/143 (99%)
Strand = Plus / Plus
Query: 1243 ccaactgcagagatgacatgacctgtgtgaaagaagagatctttgggccagttatgtcca 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92709016 ccaactgcagagatgacatgacctgtgtgaaagaagagatctttgggccagttatgtcca 92709075
Query: 1303 ttttatcatttgacactgaagctgaggttgtggaaagagcctatgataccactttcggac 1362
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 92709076 ttttatcatttgacactgaagctgaggttgtggaaagagccaatgataccactttcggac 92709135
Query: 1363 tagctgccggtgtcttcaccagg 1385
|||||||||||||||||||||||
Sbjct: 92709136 tagctgccggtgtcttcaccagg 92709158
Score = 254 bits (128), Expect = 1e-64
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 362 ggaacggaaggaggagatcgccaccatggagaccatcaacaatggcaagtccatctttga 421
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 92694988 ggaacggaaggaggagatcgccaccatggagaccatcaacaatggcaagtctatctttga 92695047
Query: 422 ggcccgattggacgttgacatttcctggcagtgtctggagtactatgcaggcttggcggg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92695048 ggcccgattggacgttgacatttcctggcagtgtctggagtactatgcaggcttggcggg 92695107
Query: 482 atccatggctgg 493
||||||||||||
Sbjct: 92695108 atccatggctgg 92695119
Score = 208 bits (105), Expect = 7e-51
Identities = 113/116 (97%)
Strand = Plus / Plus
Query: 1383 agggacatccagcgtgcccacagagtggtggctgagcttcaggctggaatgtgcttcatt 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92711351 agggacatccagcgtgcccacagagtggtggctgagcttcaggctggaatgtgcttcatt 92711410
Query: 1443 naacactataatgtcagccctgtggagttgccctttggaggatataagaagtcagg 1498
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92711411 aacaactataatgtcagccctgtggagttgccctttggaggatataagaagtcagg 92711466
Score = 180 bits (91), Expect = 2e-42
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1152 cagggtgctaaagtgttatgtggtggagacctatatgtacctgaagatcccaaattaaag 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92705934 cagggtgctaaagtgttatgtggtggagacctatatgtacctgaagatcccaaattaaag 92705993
Query: 1212 gaggggtattacatgagaccttgtgtgttaa 1242
|||||||||||||||||||||||||||||||
Sbjct: 92705994 gaggggtattacatgagaccttgtgtgttaa 92706024
Score = 113 bits (57), Expect = 3e-22
Identities = 104/114 (91%), Gaps = 6/114 (5%)
Strand = Plus / Plus
Query: 1494 tcagggtttggcagagagaatggccgtgtgaccatttgatattnnatcaca-ctga-gac 1551
|||||||||||||||||||||||||||||||||||| ||||| ||||| |||| |||
Sbjct: 92712791 tcagggtttggcagagagaatggccgtgtgaccattgaatattat-tcacaactgaagac 92712849
Query: 1552 tgtgtgcgtggaa-tgggtgatgtggagtctgttttttaaaa--cttcagtgaa 1602
||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 92712850 tgtgtgcgtggaaatgggtgatgtggagtctgttttttaaaaaccttcagtgaa 92712903
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 47,344,586
Number of extensions: 261
Number of successful extensions: 261
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 261
Number of HSP's successfully gapped: 12
Length of query: 1604
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1582
Effective length of database: 2,808,408,574
Effective search space: 4442902364068
Effective search space used: 4442902364068
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)