Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007429
(1577 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776565.1| pigment epithelium-derived factor precursor [Bo... 537 e-164
Alignment gi|XP_002695762.1| PREDICTED: pigment epithelium-derived factor... 217 6e-68
Alignment gi|NP_777095.1| alpha-2-antiplasmin precursor [Bos taurus]. 115 7e-26
Alignment gi|NP_001070985.1| serpin A12 [Bos taurus]. 97 4e-20
Alignment gi|NP_001098516.1| heparin cofactor 2 [Bos taurus]. 96 7e-20
Alignment gi|NP_001139774.1| serpin A3-6 [Bos taurus]. 95 2e-19
Alignment gi|NP_001075181.1| SERPINA3-8 [Bos taurus]. 95 2e-19
Alignment gi|NP_777193.2| serpin A3-1 precursor [Bos taurus]. 94 4e-19
Alignment gi|NP_001139773.1| serpin A3-2 [Bos taurus]. 93 8e-19
Alignment gi|NP_001033293.1| serpin A3-3 [Bos taurus]. 92 1e-18
>ref|NP_776565.1| pigment epithelium-derived factor precursor [Bos taurus].
Length = 416
Score = 537 bits (1383), Expect(2) = e-164
Identities = 271/325 (83%), Positives = 291/325 (89%)
Frame = +1
Query: 493 CQNAGPEEGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXX 672
CQNAG E GS P++ GAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRS ESPTANV
Sbjct: 19 CQNAGQEAGSLTPESTGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSGESPTANVLL 78
Query: 673 XXXXXXXXXXXXXXXXEQRTESSLHRALYYDLISNPDLHGTYKELLAAVTAPQKNLKSAS 852
EQRTES++HRALYYDLISNPD+HGTYK+LLA+VTAPQKNLKSAS
Sbjct: 79 SPLSVATALSALSLGAEQRTESNIHRALYYDLISNPDIHGTYKDLLASVTAPQKNLKSAS 138
Query: 853 RIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRELP 1032
RIIFE+KLRIKASF+ PLEKSYGTRPRILTGNSR+DLQE+NNWVQAQ KGKVARSTRE+P
Sbjct: 139 RIIFERKLRIKASFIPPLEKSYGTRPRILTGNSRVDLQEINNWVQAQMKGKVARSTREMP 198
Query: 1033 GEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLN 1212
EISI LLGVAYFKGQWVTKFDSRKTSLEDF+LDEERTVKVPMMSDP+AVLRYGLDSDLN
Sbjct: 199 SEISIFLLGVAYFKGQWVTKFDSRKTSLEDFYLDEERTVKVPMMSDPQAVLRYGLDSDLN 258
Query: 1213 CKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLS 1392
CKIAQLPLTGS SIIFFLP KVTQNLT+IEESLTSEFIHDIDRELKTVQAVLT+P+LKLS
Sbjct: 259 CKIAQLPLTGSTSIIFFLPQKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTIPKLKLS 318
Query: 1393 YEGELTKSVQELKLPSLFDSQTLAR 1467
YEGELTKSVQELKL SLFD+ ++
Sbjct: 319 YEGELTKSVQELKLQSLFDAPDFSK 343
Score = 60.8 bits (146), Expect(2) = e-164
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +3
Query: 1452 PDFSKIPGKPIKLTQVEHPIGFEWNENGGSATSAQG 1559
PDFSKI GKPIKLTQVEH +GFEWNE+G S+ G
Sbjct: 339 PDFSKITGKPIKLTQVEHRVGFEWNEDGAGTNSSPG 374
>ref|XP_002695762.1| PREDICTED: pigment epithelium-derived factor-like [Bos taurus].
Length = 210
Score = 217 bits (552), Expect(2) = 6e-68
Identities = 113/129 (87%), Positives = 121/129 (93%), Gaps = 1/129 (0%)
Frame = +1
Query: 1084 VTKFDSRKTSLEDF-HLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIF 1260
VTKFDSRKTSLE F +LDEERTVKVPMMSDP+AVLRYGLDSDLNCKIAQLPLTGS SIIF
Sbjct: 6 VTKFDSRKTSLERFKYLDEERTVKVPMMSDPQAVLRYGLDSDLNCKIAQLPLTGSTSIIF 65
Query: 1261 FLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPS 1440
FLP KVTQNLT+IEESLTSEFIHDIDRELKTVQAVLT+P+LKLSYEGELTKSVQELKL S
Sbjct: 66 FLPQKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTIPKLKLSYEGELTKSVQELKLQS 125
Query: 1441 LFDSQTLAR 1467
LFD+ ++
Sbjct: 126 LFDAPDFSK 134
Score = 60.8 bits (146), Expect(2) = 6e-68
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +3
Query: 1452 PDFSKIPGKPIKLTQVEHPIGFEWNENGGSATSAQG 1559
PDFSKI GKPIKLTQVEH +GFEWNE+G S+ G
Sbjct: 130 PDFSKITGKPIKLTQVEHRVGFEWNEDGAGTNSSPG 165
>ref|NP_777095.1| alpha-2-antiplasmin precursor [Bos taurus].
Length = 492
Score = 115 bits (287), Expect(2) = 7e-26
Identities = 81/291 (27%), Positives = 130/291 (44%)
Frame = +1
Query: 589 KLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDL 768
+LA A+ F DL+ + + S N+ + +T L L+ D
Sbjct: 82 RLARAMMTFTTDLFSLVAQSSTRPNLILSPLSVALALSHLALGAQNQTLQRLKEVLHAD- 140
Query: 769 ISNPDLHGTYKELLAAVTAPQKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRILTGN 948
S P L L + L A+R+ +K IK F+ E+ +G +P LTG
Sbjct: 141 -SGPCLPHLLSRLCQDLGPGAFRL--AARMYLQKGFPIKEDFLEQSEQLFGAKPMSLTGM 197
Query: 949 SRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDFH 1128
DL +N WV+ T+GK+ +LP + +LLL +F+G W +KFD T FH
Sbjct: 198 KGEDLANINRWVKEATEGKIEDFLSDLPDDTVLLLLNAIHFQGFWRSKFDPNLTQRGAFH 257
Query: 1129 LDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEES 1308
LDE+ TV V MM L + L ++A P +MS + +P + N + + +
Sbjct: 258 LDEQFTVPVDMMQALTYPLHWFLLEQPEIQVAHFPFKNNMSFVVLMPTRFEWNASQVLAN 317
Query: 1309 LTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLFDSQTL 1461
LT + +H L + +P+L L Y+ +L ++ +L L LF + L
Sbjct: 318 LTWDILH--QPSLSERPTKVQLPKLHLKYQLDLVATLSQLGLQELFQAPDL 366
Score = 21.9 bits (45), Expect(2) = 7e-26
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 1452 PDFSKIPGKPIKLTQVEHPIGFEWNENGGSATSAQGPA 1565
PD I + + ++ V+H E +E G A +A A
Sbjct: 364 PDLRGISDERLVVSSVQHQSALELSEAGVQAAAATSTA 401
>ref|NP_001070985.1| serpin A12 [Bos taurus].
Length = 414
Score = 97.1 bits (240), Expect = 4e-20
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Frame = +1
Query: 574 KVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRA 753
K +LA ++FG L++ S SP N+ + T + +
Sbjct: 42 KGTAQELAKRNADFGLKLFKKLSFSSPDNNILFSPWSISMAFSMLSLGAQDSTLAEIKEG 101
Query: 754 LYYDLISNPDLHGTYKELLAAVTAPQKN--LKSASRIIFEKKLRIKASFVAPLEKSY--G 921
+ I DLH + L+ + ++ L + + ++K++ K F+ + Y
Sbjct: 102 FNFRNIPEKDLHEAFHYLIHRLNQRNQDQRLGLGNALFIDQKVKPKQKFLTEVRNMYKAD 161
Query: 922 TRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDS 1101
T P NS +++NN+V +T+GK+ + + +LL+ +F+ +W +FD
Sbjct: 162 TIPTNFR-NSENAQKQINNYVSQKTQGKINNLVKNIDPGTVMLLINYIFFRARWQHEFDP 220
Query: 1102 RKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVT 1281
++T EDF LD +TVKVPMM + + G D L+C I ++P + + IF LP +
Sbjct: 221 KETKEEDFILDRNKTVKVPMMFH-VGMYKVGHDDQLSCTILEIPYQSNFTAIFVLPEE-- 277
Query: 1282 QNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLFD 1449
+ +E++L + + L A + VP+L ++ +L K + L + +F+
Sbjct: 278 GRMKQVEQALGPDTFARWKKLLVRRVADVFVPRLTITSSYDLKKMLSHLGISKIFE 333
>ref|NP_001098516.1| heparin cofactor 2 [Bos taurus].
Length = 496
Score = 96.3 bits (238), Expect = 7e-20
Identities = 80/322 (24%), Positives = 135/322 (41%), Gaps = 12/322 (3%)
Frame = +1
Query: 529 PDTVGAPVEEEDPFF--KVPVNKLAAAVSNFGYDLYRVRSSESPTA-NVXXXXXXXXXXX 699
P GA P F K V +L + F +DLYR ++ A NV
Sbjct: 100 PTRPGAGAGSVLPLFPGKSRVQRLNLLNAQFAFDLYRALAARVGAADNVFLAPVGVSAAM 159
Query: 700 XXXXXXXEQRTESSLHRALYYDLISNPD-------LHGTYKELLAAVTAPQ--KNLKSAS 852
T +H AL + N +H +++L+ + L+S S
Sbjct: 160 AMLSLGLAGDTHQEVHTALRFAEFVNASAAYELGTVHNLFRKLIHRLFRRNFGYTLRSVS 219
Query: 853 RIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRELP 1032
+ +K+L + F + + Y R + L N V TKG + + +++
Sbjct: 220 DLYVQKQLPVLDDFKTQVREYYFAEVRAADFSDPAFLAHTNRHVARLTKGLIRDALQDVD 279
Query: 1033 GEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLN 1212
+LLL YFKG WV KF T +F L+E VKVPMM A L D +L+
Sbjct: 280 PATQMLLLNCLYFKGSWVNKFPVEMTHNHNFRLNEREVVKVPMMQTKGAFLA-ASDQELD 338
Query: 1213 CKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLS 1392
C + +L G +S++ +P K++ + +E LT + + R + + +P+ KL
Sbjct: 339 CDVLRLEYVGGISMLVVVPHKLS-GMKTLESQLTPQAVERWQRSMTNRTREVLLPKFKLE 397
Query: 1393 YEGELTKSVQELKLPSLFDSQT 1458
+ +L +++ L + +LFD +
Sbjct: 398 KDYDLVGALRALGVTALFDKHS 419
>ref|NP_001139774.1| serpin A3-6 [Bos taurus].
Length = 414
Score = 95.1 bits (235), Expect = 2e-19
Identities = 71/310 (22%), Positives = 138/310 (44%), Gaps = 6/310 (1%)
Frame = +1
Query: 553 EEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRT 732
EE+ V + LA++ ++F + LY+ + + P NV T
Sbjct: 33 EEQHKVTSVDGHSLASSNTDFAFSLYKQLALKDPNKNVIFSPLSVSIALAFLSLGAHGPT 92
Query: 733 ESSLHRALYYDLISNPD--LHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVA 900
+ + L ++L P+ +H ++ LL P Q L + I +++L++ F+
Sbjct: 93 VTEILEGLKFNLTETPETEIHQGFQHLLQTFNQPSNQLQLSVGNAIFVQEELKLLDKFIE 152
Query: 901 PLEKSYGTRPRILTGNSRLDLQE-VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKG 1077
Y + + +N++V+ +T+GK+ ++L ++L+ YFK
Sbjct: 153 DARVLYSSEAFPTNFRDPEAAKSLINDYVKNKTQGKIEELFKDLSPRTELVLVNYVYFKA 212
Query: 1078 QWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSII 1257
QW T+FD + T +FH+ + +TV+VPMM+ Y D +L C + +L T + S +
Sbjct: 213 QWKTRFDPKHTEKTEFHVSDNKTVEVPMMT-LDLETPYFRDEELGCTLVELTYTSNDSAL 271
Query: 1258 FFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQA-VLTVPQLKLSYEGELTKSVQELKL 1434
F LP K + +E LT E + L+ + L +P+ + EL ++ ++ +
Sbjct: 272 FILPDK--GKMQDLEAKLTPEMLTRWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGI 329
Query: 1435 PSLFDSQTLA 1464
+F L+
Sbjct: 330 KKIFTDADLS 339
>ref|NP_001075181.1| SERPINA3-8 [Bos taurus].
Length = 418
Score = 95.1 bits (235), Expect = 2e-19
Identities = 73/317 (23%), Positives = 144/317 (45%), Gaps = 16/317 (5%)
Frame = +1
Query: 553 EEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRT 732
EE V + LA++ ++F + LY+ + ++P NV T
Sbjct: 33 EERHKGTSVDGHSLASSNTDFAFSLYKQLALKNPNKNVIFSPLSISIALAFLSLGARGPT 92
Query: 733 ESSLHRALYYDLISNPD--LHGTYKELLAAVTAPQKNLKSA--SRIIFEKKLRIKASFVA 900
+ + L ++L P+ +H ++ LL ++ P L+ + + + +++L++ F
Sbjct: 93 VTEILEGLKFNLTETPEREIHQGFQHLLQMLSRPSNELQLSVGNTMFVQEQLKLLDKFRE 152
Query: 901 PLEKSYGTRPRILTGNSRLDLQE--VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFK 1074
Y T T + + +N++V+ +T+GK+ ++L ++L+ YFK
Sbjct: 153 DALALY-TSEAFSTNFKDPETAKSLINDYVKNKTRGKIVDLFKDLDPLTKVILVNYIYFK 211
Query: 1075 GQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSI 1254
QW T FD ++T FH+ + +TV+VPMMS V Y D +L+C + +L T + S
Sbjct: 212 AQWRTPFDPKQTYKSQFHVSKNKTVEVPMMSIGDLVTPYFRDEELDCTLVELTYTSNDSA 271
Query: 1255 IFFLPLK----------VTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGE 1404
+F LP + + + LT ESL IH+ L +P+ ++ + +
Sbjct: 272 LFILPDEGKMQDLEAKLIPEMLTRWRESLYPRGIHE-----------LNLPRFSIATDYK 320
Query: 1405 LTKSVQELKLPSLFDSQ 1455
L + +L++ +F +
Sbjct: 321 LKDILSQLEIKKVFTQE 337
>ref|NP_777193.2| serpin A3-1 precursor [Bos taurus].
Length = 411
Score = 93.6 bits (231), Expect = 4e-19
Identities = 77/331 (23%), Positives = 146/331 (44%), Gaps = 15/331 (4%)
Frame = +1
Query: 517 GSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXX 696
G P+ + V +D +V + LA++ ++F + LY+ ++P NV
Sbjct: 18 GIPSVHCLPENVVVKDQHRRVDGHTLASSNTDFAFSLYKQLPLKNPNKNVILSPLSVSIA 77
Query: 697 XXXXXXXXEQRTESSLHRALYYDL--ISNPDLHGTYKELLAAVTAP--QKNLKSASRIIF 864
T + + L ++L I ++H +++ LL A+ P Q L + +
Sbjct: 78 LAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGNAMFV 137
Query: 865 EKKLRIKASFVAPLEKSYGTRPRILT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGEI 1041
+++L++ F+ + Y + +S +N++V+ +T+GK+ + L
Sbjct: 138 QEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYLSPRT 197
Query: 1042 SILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKI 1221
++L+ YFK QW T FD + T +FH+ + +TV+VPMM+ Y D +L C +
Sbjct: 198 ELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMT-LDLETPYFRDEELGCTL 256
Query: 1222 AQLPLTGSMSIIFFLP---------LKVT-QNLTMIEESLTSEFIHDIDRELKTVQAVLT 1371
+L T + S +F LP K+T + LT SL IH+ L
Sbjct: 257 VELTYTSNDSALFILPDEGKMRDLEAKLTPETLTRWRNSLQPRRIHE-----------LY 305
Query: 1372 VPQLKLSYEGELTKSVQELKLPSLFDSQTLA 1464
+P+ + EL + +L + +F + L+
Sbjct: 306 LPKFSIKSNYELNDILSQLGIRKIFANADLS 336
>ref|NP_001139773.1| serpin A3-2 [Bos taurus].
Length = 411
Score = 92.8 bits (229), Expect = 8e-19
Identities = 74/317 (23%), Positives = 142/317 (44%), Gaps = 15/317 (4%)
Frame = +1
Query: 559 EDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTES 738
+D +V + LA++ ++F + LY+ + ++P NV T +
Sbjct: 32 KDQHRRVDGHTLASSNTDFAFSLYKQLALKNPNKNVILSPLSVSIALAFLSLGARGSTLT 91
Query: 739 SLHRALYYDL--ISNPDLHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVAPL 906
+ L ++L I ++H +++ LL A+ P Q L + + +++L++ F+
Sbjct: 92 EILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGNAMFVQEELKLLDKFIEDA 151
Query: 907 EKSYGTRPRILT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQW 1083
+ Y + +S +N++V+ +T+GK+ + L ++L+ YFK QW
Sbjct: 152 QVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYLSPRTELVLVNYIYFKAQW 211
Query: 1084 VTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFF 1263
T FD + T +FH+ + +TV+VPMM+ Y D +L C + +L T + S +F
Sbjct: 212 KTPFDPKHTEQAEFHVSDNKTVEVPMMT-LDLETPYFRDEELGCTLVELTYTSNDSALFI 270
Query: 1264 LP---------LKVT-QNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTK 1413
LP K+T + LT SL IH+ L +P+ + EL
Sbjct: 271 LPDEGKMRDLEAKLTPETLTRWRNSLQPRRIHE-----------LYLPKFSIKSNYELND 319
Query: 1414 SVQELKLPSLFDSQTLA 1464
+ +L + +F + L+
Sbjct: 320 ILSQLGIRKIFANADLS 336
>ref|NP_001033293.1| serpin A3-3 [Bos taurus].
Length = 411
Score = 92.4 bits (228), Expect = 1e-18
Identities = 69/308 (22%), Positives = 142/308 (46%), Gaps = 6/308 (1%)
Frame = +1
Query: 559 EDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTES 738
+D +V + LA++ ++F + LY+ + ++P NV T +
Sbjct: 32 KDRHRRVDGHTLASSNTDFAFSLYKQLALKNPNKNVMFSPLSVSMALAFLSLGARGPTLT 91
Query: 739 SLHRALYYDL--ISNPDLHGTYKELLAAVTAPQKNLKSA--SRIIFEKKLRIKASFVAPL 906
+ L ++L I +H ++ LL A+ P+ L+ + + + +++L++ F+
Sbjct: 92 EILEGLKFNLTEIQETQIHQGFQHLLQALNRPRNQLQLSVGNAMFVQEELKLLDKFIEDA 151
Query: 907 EKSYGTRPRILTGNSRLDLQE-VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQW 1083
Y + + +N++V+ +T+GK+ ++L ++L+ YFK QW
Sbjct: 152 RVLYSSEAFPTNFRDPEAAKSLINDYVKNKTQGKIEELFKDLSPRTELVLVNYVYFKAQW 211
Query: 1084 VTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFF 1263
T+FD + T +FH+ + +TV+VPMM+ Y D +L C + +L T + S +F
Sbjct: 212 KTRFDPKHTEQAEFHVSDNKTVEVPMMT-LDLETPYFRDEELGCTLVELTYTSNDSALFI 270
Query: 1264 LPLKVTQNLTMIEESLTSEFIHDIDRELKTVQA-VLTVPQLKLSYEGELTKSVQELKLPS 1440
LP K + +E LT E + L+ + L +P+ + EL ++ ++ +
Sbjct: 271 LPDK--GKMQDLEAKLTPEMLTRWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGIKK 328
Query: 1441 LFDSQTLA 1464
+F L+
Sbjct: 329 IFTDADLS 336
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 60,566,718
Number of extensions: 1778942
Number of successful extensions: 7821
Number of sequences better than 1.0e-05: 78
Number of HSP's gapped: 7711
Number of HSP's successfully gapped: 81
Length of query: 525
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 418
Effective length of database: 14,140,958
Effective search space: 5910920444
Effective search space used: 5910920444
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007429
(1577 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071056.2| pigment epithelium-derived factor [Canis lup... 520 e-158
Alignment gi|XP_854003.1| PREDICTED: similar to Alpha-2-antiplasmin precu... 119 4e-28
Alignment gi|XP_547962.2| PREDICTED: similar to serine (or cysteine) prot... 99 1e-20
Alignment gi|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1... 97 4e-20
Alignment gi|XP_851985.1| PREDICTED: similar to Plasminogen activator inh... 94 4e-19
Alignment gi|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin ... 90 7e-18
Alignment gi|XP_541074.2| PREDICTED: similar to Squamous cell carcinoma a... 89 1e-17
Alignment gi|XP_538128.1| PREDICTED: similar to Thyroxine-binding globuli... 88 2e-17
Alignment gi|XP_855210.1| PREDICTED: similar to serine (or cysteine) prot... 87 6e-17
Alignment gi|XP_545313.2| PREDICTED: similar to serine (or cysteine) prot... 86 1e-16
>ref|NP_001071056.2| pigment epithelium-derived factor [Canis lupus familiaris].
Length = 396
Score = 520 bits (1340), Expect(2) = e-158
Identities = 262/322 (81%), Positives = 286/322 (88%)
Frame = +1
Query: 502 AGPEEGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXX 681
A P++ SPAPD G PVEEEDPFF+VPVNKLAAA+SNFGYDLYRVRSS SP ANV
Sbjct: 3 AAPKD-SPAPDATGVPVEEEDPFFRVPVNKLAAAISNFGYDLYRVRSSFSPAANVLLSPL 61
Query: 682 XXXXXXXXXXXXXEQRTESSLHRALYYDLISNPDLHGTYKELLAAVTAPQKNLKSASRII 861
EQRTES++HRALYYDLISNPD+H TYKELLA+VTAP+KN KSASRI+
Sbjct: 62 SVATALSALSLGAEQRTESTIHRALYYDLISNPDIHSTYKELLASVTAPEKNFKSASRIV 121
Query: 862 FEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRELPGEI 1041
FE+KLRIK+SFVAPLEKSY TRPRILTGN RLDLQEVNNWVQAQ KGK+ARSTRE+P I
Sbjct: 122 FERKLRIKSSFVAPLEKSYSTRPRILTGNPRLDLQEVNNWVQAQMKGKIARSTREIPSGI 181
Query: 1042 SILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKI 1221
SILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKA+LRYGLDSDL+CKI
Sbjct: 182 SILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAILRYGLDSDLSCKI 241
Query: 1222 AQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEG 1401
AQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKT+QAVLT+P+LKLSYEG
Sbjct: 242 AQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTIQAVLTIPKLKLSYEG 301
Query: 1402 ELTKSVQELKLPSLFDSQTLAR 1467
E+TKS+QE+KL SLFDS ++
Sbjct: 302 EVTKSLQEMKLQSLFDSPDFSK 323
Score = 59.3 bits (142), Expect(2) = e-158
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3
Query: 1452 PDFSKIPGKPIKLTQVEHPIGFEWNENGGSATSAQG 1559
PDFSKI GKPIKLTQVEH GFEWNE+G T + G
Sbjct: 319 PDFSKITGKPIKLTQVEHRAGFEWNEDGAGTTPSPG 354
>ref|XP_854003.1| PREDICTED: similar to Alpha-2-antiplasmin precursor (Alpha-2-plasmin
inhibitor) (Alpha-2-PI) (Alpha-2-AP) [Canis familiaris].
Length = 491
Score = 119 bits (297), Expect(2) = 4e-28
Identities = 86/310 (27%), Positives = 141/310 (45%)
Frame = +1
Query: 532 DTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXX 711
D GAP E+ +LA A+ F DL+ + + S + N+
Sbjct: 69 DCRGAPTPEQ-------TRRLAQAMMAFTTDLFSLVAQRSTSPNLILSPLSVALALSHLA 121
Query: 712 XXXEQRTESSLHRALYYDLISNPDLHGTYKELLAAVTAPQKNLKSASRIIFEKKLRIKAS 891
+ +T L + L+ D S P L L + L A+R+ +K IK
Sbjct: 122 LGAQNQTLRRLEQVLHAD--SGPCLPHLLSRLCQDLGPGAFRL--AARMYLQKGFPIKED 177
Query: 892 FVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYF 1071
F+ E+ +G +P LTG DL +N WV+ T+GK+ ELP + +LLL +F
Sbjct: 178 FLKQSEQLFGAKPMSLTGRKGDDLLNINQWVKEATEGKIEDFLSELPDDTVLLLLNAIHF 237
Query: 1072 KGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMS 1251
+G W +KFD T + FHL+E+ TV V MM LR+ L ++A P +MS
Sbjct: 238 QGFWRSKFDPSLTQRDSFHLNEQFTVPVDMMHARTYPLRWFLLEQPEIQVAHFPFKNNMS 297
Query: 1252 IIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELK 1431
+ +P N++ + +L+ + +H L+ + +P+L L+Y+ +L ++ L
Sbjct: 298 FVVIMPTHFEWNVSQVLANLSWDILH--QPLLREKPTKVRLPKLHLNYQLDLVATLSRLG 355
Query: 1432 LPSLFDSQTL 1461
L LF + L
Sbjct: 356 LQELFQAPDL 365
Score = 25.8 bits (55), Expect(2) = 4e-28
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 1452 PDFSKIPGKPIKLTQVEHPIGFEWNENGGSATSAQGPA 1565
PD I + + +T V+H E +E G A +A G A
Sbjct: 363 PDLRGISDQRLVVTSVQHQSALELSEAGVEAAAATGTA 400
>ref|XP_547962.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 4
[Canis familiaris].
Length = 417
Score = 98.6 bits (244), Expect = 1e-20
Identities = 71/297 (23%), Positives = 135/297 (45%), Gaps = 5/297 (1%)
Frame = +1
Query: 580 PVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALY 759
P K+A + F Y + +S+SP +N+ +++ + L
Sbjct: 41 PSLKIAPGNTAFALHFYHLMASQSPGSNIFFSPLSISASYAMLSLGARSHSKTQILEGLG 100
Query: 760 YDL--ISNPDLHGTYKELLAAVTAPQKNLKS--ASRIIFEKKLRIKASFVAPLEKSYGTR 927
++L +S D+H ++ LL + P L+ S + + L I F+ Y ++
Sbjct: 101 FNLTEVSESDIHRGFQHLLHTLHLPDDRLEMHMGSTLFLSQDLLILPEFLNDSVAFYDSK 160
Query: 928 PRILTGNSRLDL-QEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSR 1104
+ + + Q +N+ ++ +T+GK+ +L +I+++L+ YFK W F
Sbjct: 161 LFLTNFHDPVGTTQLINDHIKEETQGKIVDLVSKLNTDIAMVLVNYIYFKALWEKPFQPS 220
Query: 1105 KTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQ 1284
T+ +DFH+DE V+VPMM A Y D L C + ++ G+M+ F LP +
Sbjct: 221 MTTTQDFHVDENTVVQVPMMLQDTAHHWYLNDRYLPCSVLRMDYKGNMTAFFILPNR--G 278
Query: 1285 NLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLFDSQ 1455
+ +EE+LT E + +R L+ + L P+ +S +L + + ++ LF Q
Sbjct: 279 KMKQVEEALTPEMLTRWNRLLQKRKLELHFPKFSISGSYQLNEILPKMGFVDLFSRQ 335
>ref|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1 antiproteinase,
antitrypsin), member 1 [Canis lupus familiaris].
Length = 415
Score = 97.1 bits (240), Expect = 4e-20
Identities = 71/311 (22%), Positives = 141/311 (45%), Gaps = 10/311 (3%)
Frame = +1
Query: 553 EEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRT 732
E +DP + +K+A +++F + LYR + ES T N+ + T
Sbjct: 34 ETDDPEHQPACHKIAPNLADFAFSLYRQVAQESNTTNIFFSPVSIATAFAMLSLGTKGDT 93
Query: 733 ESSLHRALYYDLISNPD--LHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVA 900
+ + + L ++L + +H + +LL+ + P Q L + S + +++ F+
Sbjct: 94 HTQIMQGLGFNLTERAEREVHQGFHQLLSILNQPDNQLQLTTGSGLFINDTIKLLNKFLE 153
Query: 901 PLEKSYGTRPRILTGNSRLDLQ-EVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKG 1077
+ Y + + + + ++NN+V+ T+GK+ ++L + L+ +FKG
Sbjct: 154 DVRNLYHSEAFTINFRHTEEAKKQINNYVEKGTQGKIVDLVKDLDEDTVFALVNYIFFKG 213
Query: 1078 QWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCK-----IAQLPLTG 1242
+W F+ T+ EDFH+DE TVKVPMMS R G+ +C + + G
Sbjct: 214 KWEKPFEVEHTTEEDFHVDEHTTVKVPMMS------RLGMFDIQHCATLSSWVLLMEYVG 267
Query: 1243 SMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQ 1422
+ + F LP + + +E LT E + + A L +P+L +S +L +
Sbjct: 268 NATAFFILPDE--GKMQHLESKLTKEVLAKFLEKRYARSASLRLPKLSISGTYDLKSVLS 325
Query: 1423 ELKLPSLFDSQ 1455
++ + +F ++
Sbjct: 326 KMGITKVFSAE 336
>ref|XP_851985.1| PREDICTED: similar to Plasminogen activator inhibitor-2 precursor
(PAI-2) (Placental plasminogen activator inhibitor)
(Monocyte Arg-serpin) (Urokinase inhibitor) [Canis
familiaris].
Length = 537
Score = 94.0 bits (232), Expect = 4e-19
Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 11/251 (4%)
Frame = +1
Query: 784 LHGTYKELLAAVTAPQKN--LKSASRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRL 957
LH + L AAV+A L+S +++ EK R K ++ +K Y T P+ +
Sbjct: 223 LHSAFSSLSAAVSAASGEYLLESVNQLFGEKTARFKEEYMRLSKKYYSTEPQAVDFLECA 282
Query: 958 D--LQEVNNWVQAQTKGKVARSTRE--LPGEISILLLGVAYFKGQWVTKFDSRKTSLEDF 1125
+ +++N+WV+ QTKGK+ + + G+ ++L+ YFKG+W T F+ + L F
Sbjct: 283 EETRKKINSWVKTQTKGKIPDLLPKGSVDGDTKMVLVNAVYFKGKWKTPFEKKLNGLYPF 342
Query: 1126 HLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQ---NLTM 1296
++ + V V MM A L G DL +I +LP G++S+ LP ++T L +
Sbjct: 343 RVNTTQRVPVQMMY-LHADLNIGYIGDLKTQILELPYAGNISMFLLLPDEITDVSTGLEL 401
Query: 1297 IEESLT-SEFIHDIDRELKTVQAV-LTVPQLKLSYEGELTKSVQELKLPSLFDSQTLARS 1470
+E +T +FI ++ V + +PQ KL EL ++ + + F ++S
Sbjct: 402 LESEITYDKFIKWTSKDTMAEDNVEVYLPQFKLEERYELRSILRNMGMEEAF-----SQS 456
Query: 1471 RANLSNLLRWN 1503
+AN S + N
Sbjct: 457 QANFSGMSNTN 467
>ref|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin precursor (ACT) [Canis
familiaris].
Length = 421
Score = 89.7 bits (221), Expect = 7e-18
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Frame = +1
Query: 589 KLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDL 768
+LA++ ++F LY+ +S+SP NV + T++ + L ++L
Sbjct: 46 RLASSNTDFTLSLYKELASKSPDKNVIFSPMSISIALAFLSLGAQGTTQTEILEGLKFNL 105
Query: 769 ISNPD--LHGTYKELLAAVTAPQKNLKSA--SRIIFEKKLRIKASFVAPLEKSYGTRPRI 936
PD +H ++ LL A+ P L+ + + + ++L++ +FV Y +
Sbjct: 106 TEIPDREIHRGFQHLLRALHQPSSELQLSVGNAMFVGEQLKLLETFVEDARALYASEAFS 165
Query: 937 LT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTS 1113
NS + +N++V+ +T+GK+ ++L +++L+ + K +W T FD R T
Sbjct: 166 TNFQNSAAAEKLINDYVKNRTQGKIVDLVKDLDLHTAVVLVNYIFLKAKWKTPFDPRDTF 225
Query: 1114 LEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLP 1269
F + + R+VKVPMM+ + Y D L+C + +L T + S +F LP
Sbjct: 226 KSKFQVSKSRSVKVPMMNLEDVWVPYFRDDALSCTVVELQYTSNDSALFVLP 277
>ref|XP_541074.2| PREDICTED: similar to Squamous cell carcinoma antigen 2 (SCCA-2)
(Leupin) isoform 1 [Canis familiaris].
Length = 389
Score = 89.0 bits (219), Expect = 1e-17
Identities = 74/325 (22%), Positives = 150/325 (46%), Gaps = 22/325 (6%)
Frame = +1
Query: 583 VNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYY 762
+N L+AA + F +DL++ + N+ ++ T + + L++
Sbjct: 1 MNSLSAANTRFAFDLFQQFKTSKKGDNIFFSPLSISSALAMTYLGAKENTALEIGKVLHF 60
Query: 763 DLISNP--------------DLHGTYKELLAAVTAPQK--NLKSASRIIFEKKLRIKASF 894
+ + ++H +++LL + P L A++ EKK + +
Sbjct: 61 NEATESTTGRTTTDHVEKMENVHHQFQKLLTELKKPTDAYELNMANKFYGEKKYQFLQEY 120
Query: 895 VAPLEKSYGTRPRILTGNSRLD--LQEVNNWVQAQTKGKVARS-TRELPGEISILLLGVA 1065
+ ++K Y + N+ + +++N+WV++QT K+ ++ ++L+
Sbjct: 121 MDNIKKFYLASVESVDFNNAAEESRKKINSWVESQTNEKIKDMFPKDSLNHTILVLVNAV 180
Query: 1066 YFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTG- 1242
YFKGQW TKFD++ T ++F LD++ + V MM V + DL KI ++P G
Sbjct: 181 YFKGQWDTKFDTKNTVEKEFWLDKDTSKPVQMMRQSN-VFNFTSLEDLQAKILEIPYKGK 239
Query: 1243 SMSIIFFLPLKVTQNLTMIEESLTSEFIHD--IDRELKTVQAVLTVPQLKLSYEGELTKS 1416
+S++ LP +V L +E+ LT+E + + + + Q L +P+ K+ EL +
Sbjct: 240 DLSMMLLLPHEV-DGLQKLEDQLTAENLIEWTSSQNMSNGQVDLYLPRFKVEESYELKAT 298
Query: 1417 VQELKLPSLFDSQTLARSRANLSNL 1491
++ L + F+++ RAN S +
Sbjct: 299 LKALGMVDAFNTK-----RANFSGM 318
>ref|XP_538128.1| PREDICTED: similar to Thyroxine-binding globulin precursor
(T4-binding globulin) [Canis familiaris].
Length = 414
Score = 88.2 bits (217), Expect = 2e-17
Identities = 68/292 (23%), Positives = 138/292 (47%), Gaps = 6/292 (2%)
Frame = +1
Query: 589 KLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDL 768
K+++ ++F ++LYR + E+P N+ T+ + +L ++L
Sbjct: 40 KMSSINADFAFNLYRRFTVETPDRNIFFSPVSISAALAMLSFGACYSTQIQILESLGFNL 99
Query: 769 ISNP--DLHGTYKELLAAVTAPQKNLK--SASRIIFEKKLRIKASFVAPLEKSYGTRPRI 936
P ++ ++ L+ ++ P+K L+ + + K+L+ A F+ ++ Y T
Sbjct: 100 TDTPMAEIQQGFQHLICSLNIPKKELELQMGNTLFIGKQLKPLAQFLDDVKSLYATEVFS 159
Query: 937 LT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTS 1113
N Q +N+ V+ QTKG+V ++L ++L+ +FK QW FD KT
Sbjct: 160 TDFSNVSAAQQLINSHVEKQTKGEVVGLIQDLKPNTIMVLVNYIHFKAQWANPFDPSKTE 219
Query: 1114 LE-DFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNL 1290
F +D+ TVKVPMM + +D++LNC + Q+ + + +F LP + +
Sbjct: 220 EGFSFSVDKTTTVKVPMMHQMEQYYHL-VDTELNCTVLQMDYSKNALALFVLPKE--GQI 276
Query: 1291 TMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLF 1446
+E +++S+ + +R L+ L VP+ +S +L ++ ++ + F
Sbjct: 277 EWVEGAMSSKTLKKWNRLLQKGWIDLFVPKFSISATHDLGATILKMGIQDAF 328
>ref|XP_855210.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 12
[Canis familiaris].
Length = 414
Score = 86.7 bits (213), Expect = 6e-17
Identities = 68/288 (23%), Positives = 139/288 (48%), Gaps = 7/288 (2%)
Frame = +1
Query: 607 SNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLISNPDL 786
++FG LYR +S SP N+ + T + + + + D+
Sbjct: 53 TDFGCKLYRKLASNSPRKNIFFSPLSISAAFSMLSLGAQDSTLDEIKQGFNFRNMPERDI 112
Query: 787 HGTYKELLAAVTAPQKNLKSASR--IIFEKKLRIKASFVAPLEKSYG--TRPRILT--GN 948
H + L+ + ++L+ R + ++KL+ + F+ ++ Y T P G+
Sbjct: 113 HEGFHYLIYRMNQGSQDLELHLRNTLFIDQKLQPEKKFLTNVKNLYSADTVPTNFQNLGD 172
Query: 949 SRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDFH 1128
+R +++N++V +T+GK+ + + +LL +F+ +W +FD + T EDF
Sbjct: 173 TR---KQINDYVSQKTQGKINNLIKNIDPGTVMLLTNCIFFRARWQHEFDPKITKEEDFF 229
Query: 1129 LDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEES 1308
LD + VKVPMM + G D L+C I ++P G++S F LP + + +EE+
Sbjct: 230 LDGNQRVKVPMMF-RGGMYETGYDEQLSCTILEMPYQGTISATFILPDE--GKMKTVEEA 286
Query: 1309 LTSEFIHDIDRELKTVQAV-LTVPQLKLSYEGELTKSVQELKLPSLFD 1449
L ++ D ++L T + V +++P+ ++ +L +++ L + +F+
Sbjct: 287 LKAD-TFDRWKKLITRRVVDVSLPRFSITGNYDLKRTLSYLGITKIFE 333
>ref|XP_545313.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade B (ovalbumin), member 1 [Canis familiaris].
Length = 382
Score = 85.5 bits (210), Expect = 1e-16
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Frame = +1
Query: 766 LISNPDLHGTYKELLAAVTAPQKN--LKSASRIIFEKKLRIKASFVAPLEKSYGTRPRIL 939
L ++ ++H ++ L A + + LK A+R+ EK F+A +K YG +
Sbjct: 64 LYADGEIHSRFQSLNADINKRGASYILKLANRLYGEKTYNFLPEFLASTQKMYGAELASV 123
Query: 940 TGNSRLD--LQEVNNWVQAQTKGKVAR--STRELPGEISILLLGVAYFKGQWVTKFDSRK 1107
+ + +N WV+ QT+GK+ + + ++L+ YFKG W +F +
Sbjct: 124 DFQQASEEARKAINKWVKGQTEGKIPELLAAGTVDSMTKLVLVNAIYFKGSWEDEFSKKD 183
Query: 1108 TSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTG-SMSIIFFLPLKV-- 1278
T+ F L+++ V MM K +G DL C++ +LP G +S++ LP +
Sbjct: 184 TADAPFRLNKKDKKTVKMMYKKKK-FPFGYIEDLKCRVLELPYRGRELSMLILLPDDIED 242
Query: 1279 -TQNLTMIEESLTSEFIHDIDR--ELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLFD 1449
+ L IEE LT E +H+ + L V+ + +P+ KL EL + L + LF
Sbjct: 243 ESTGLKKIEEHLTLEKLHEWTKAENLDRVEVNVYLPKFKLEESYELNSHLAHLGVQDLF- 301
Query: 1450 SQTLARSRANLSNL 1491
RA+LS +
Sbjct: 302 -----TGRADLSGM 310
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 63,366,320
Number of extensions: 1841249
Number of successful extensions: 7784
Number of sequences better than 1.0e-05: 42
Number of HSP's gapped: 7733
Number of HSP's successfully gapped: 45
Length of query: 525
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 418
Effective length of database: 15,307,552
Effective search space: 6398556736
Effective search space used: 6398556736
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007429
(1577 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002606.3| pigment epithelium-derived factor precursor [Ho... 528 e-160
Alignment gi|NP_001027466.1| plasma protease C1 inhibitor precursor [Homo... 113 4e-25
Alignment gi|NP_000053.2| plasma protease C1 inhibitor precursor [Homo sa... 113 4e-25
Alignment gi|NP_001159392.1| alpha-2-antiplasmin isoform a precursor [Hom... 107 2e-23
Alignment gi|NP_000925.2| alpha-2-antiplasmin isoform a precursor [Homo s... 107 2e-23
Alignment gi|NP_001159393.1| alpha-2-antiplasmin isoform b precursor [Hom... 107 3e-23
Alignment gi|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens]. 100 4e-21
Alignment gi|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens]. 100 4e-21
Alignment gi|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens]. 100 4e-21
Alignment gi|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens]. 100 4e-21
>ref|NP_002606.3| pigment epithelium-derived factor precursor [Homo sapiens].
Length = 418
Score = 528 bits (1359), Expect(2) = e-160
Identities = 269/328 (82%), Positives = 291/328 (88%), Gaps = 2/328 (0%)
Frame = +1
Query: 490 SCQNAG--PEEGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTAN 663
SCQN PEEGSP PD+ GA VEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSS SPT N
Sbjct: 18 SCQNPASPPEEGSPDPDSTGALVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSTSPTTN 77
Query: 664 VXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLISNPDLHGTYKELLAAVTAPQKNLK 843
V EQRTES +HRALYYDLIS+PD+HGTYKELL VTAPQKNLK
Sbjct: 78 VLLSPLSVATALSALSLGAEQRTESIIHRALYYDLISSPDIHGTYKELLDTVTAPQKNLK 137
Query: 844 SASRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTR 1023
SASRI+FEKKLRIK+SFVAPLEKSYGTRPR+LTGN RLDLQE+NNWVQAQ KGK+ARST+
Sbjct: 138 SASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLTGNPRLDLQEINNWVQAQMKGKLARSTK 197
Query: 1024 ELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDS 1203
E+P EISILLLGVA+FKGQWVTKFDSRKTSLEDF+LDEERTV+VPMMSDPKAVLRYGLDS
Sbjct: 198 EIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLDS 257
Query: 1204 DLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQL 1383
DL+CKIAQLPLTGSMSIIFFLPLKVTQNLT+IEESLTSEFIHDIDRELKTVQAVLTVP+L
Sbjct: 258 DLSCKIAQLPLTGSMSIIFFLPLKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTVPKL 317
Query: 1384 KLSYEGELTKSVQELKLPSLFDSQTLAR 1467
KLSYEGE+TKS+QE+KL SLFDS ++
Sbjct: 318 KLSYEGEVTKSLQEMKLQSLFDSPDFSK 345
Score = 59.3 bits (142), Expect(2) = e-160
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3
Query: 1452 PDFSKIPGKPIKLTQVEHPIGFEWNENGGSATSAQG 1559
PDFSKI GKPIKLTQVEH GFEWNE+G T + G
Sbjct: 341 PDFSKITGKPIKLTQVEHRAGFEWNEDGAGTTPSPG 376
>ref|NP_001027466.1| plasma protease C1 inhibitor precursor [Homo sapiens].
Length = 500
Score = 113 bits (283), Expect = 4e-25
Identities = 60/203 (29%), Positives = 109/203 (53%), Gaps = 3/203 (1%)
Frame = +1
Query: 832 KNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVA 1011
K + S S+I L I+ +FV Y + PR+L+ NS +L+ +N WV T K++
Sbjct: 216 KGVTSVSQIFHSPDLAIRDTFVNASRTLYSSSPRVLSNNSDANLELINTWVAKNTNNKIS 275
Query: 1012 RSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRY 1191
R LP + ++LL Y +W T FD +KT +E FH + +KVPMM+ K + +
Sbjct: 276 RLLDSLPSDTRLVLLNAIYLSAKWKTTFDPKKTRMEPFHF-KNSVIKVPMMNSKKYPVAH 334
Query: 1192 GLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDREL---KTVQA 1362
+D L K+ QL L+ ++S++ +P + L +E++L+ I +L K
Sbjct: 335 FIDQTLKAKVGQLQLSHNLSLVILVPQNLKHRLEDMEQALSPSVFKAIMEKLEMSKFQPT 394
Query: 1363 VLTVPQLKLSYEGELTKSVQELK 1431
+LT+P++K++ ++ +++L+
Sbjct: 395 LLTLPRIKVTTSQDMLSIMEKLE 417
>ref|NP_000053.2| plasma protease C1 inhibitor precursor [Homo sapiens].
Length = 500
Score = 113 bits (283), Expect = 4e-25
Identities = 60/203 (29%), Positives = 109/203 (53%), Gaps = 3/203 (1%)
Frame = +1
Query: 832 KNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVA 1011
K + S S+I L I+ +FV Y + PR+L+ NS +L+ +N WV T K++
Sbjct: 216 KGVTSVSQIFHSPDLAIRDTFVNASRTLYSSSPRVLSNNSDANLELINTWVAKNTNNKIS 275
Query: 1012 RSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRY 1191
R LP + ++LL Y +W T FD +KT +E FH + +KVPMM+ K + +
Sbjct: 276 RLLDSLPSDTRLVLLNAIYLSAKWKTTFDPKKTRMEPFHF-KNSVIKVPMMNSKKYPVAH 334
Query: 1192 GLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDREL---KTVQA 1362
+D L K+ QL L+ ++S++ +P + L +E++L+ I +L K
Sbjct: 335 FIDQTLKAKVGQLQLSHNLSLVILVPQNLKHRLEDMEQALSPSVFKAIMEKLEMSKFQPT 394
Query: 1363 VLTVPQLKLSYEGELTKSVQELK 1431
+LT+P++K++ ++ +++L+
Sbjct: 395 LLTLPRIKVTTSQDMLSIMEKLE 417
>ref|NP_001159392.1| alpha-2-antiplasmin isoform a precursor [Homo sapiens].
Length = 491
Score = 107 bits (268), Expect = 2e-23
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 3/295 (1%)
Frame = +1
Query: 586 NKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYD 765
++LA A+ F DL+ + + S N+ + T L + L+
Sbjct: 80 HRLARAMMAFTADLFSLVAQTSTCPNLILSPLSVALALSHLALGAQNHTLQRLQQVLHAG 139
Query: 766 LISNPDLHGTYKELLAAVTAPQKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRILTG 945
S P L L + L A+R+ +K IK F+ E+ +G +P LTG
Sbjct: 140 --SGPCLPHLLSRLCQDLGPGAFRL--AARMYLQKGFPIKEDFLEQSEQLFGAKPVSLTG 195
Query: 946 NSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDF 1125
DL +N WV+ T+GK+ LP + +LLL +F+G W KFD T + F
Sbjct: 196 KQEDDLANINQWVKEATEGKIQEFLSGLPEDTVLLLLNAIHFQGFWRNKFDPSLTQRDSF 255
Query: 1126 HLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEE 1305
HLDE+ TV V MM LR+ L ++A P +MS + +P N++ +
Sbjct: 256 HLDEQFTVPVEMMQARTYPLRWFLLEQPEIQVAHFPFKNNMSFVVLVPTHFEWNVSQVLA 315
Query: 1306 SLTSEFIHD---IDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLFDSQTL 1461
+L+ + +H +R K + +P+L L ++ +L ++ +L L LF + L
Sbjct: 316 NLSWDTLHPPLVWERPTK-----VRLPKLYLKHQMDLVATLSQLGLQELFQAPDL 365
>ref|NP_000925.2| alpha-2-antiplasmin isoform a precursor [Homo sapiens].
Length = 491
Score = 107 bits (268), Expect = 2e-23
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 3/295 (1%)
Frame = +1
Query: 586 NKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYD 765
++LA A+ F DL+ + + S N+ + T L + L+
Sbjct: 80 HRLARAMMAFTADLFSLVAQTSTCPNLILSPLSVALALSHLALGAQNHTLQRLQQVLHAG 139
Query: 766 LISNPDLHGTYKELLAAVTAPQKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRILTG 945
S P L L + L A+R+ +K IK F+ E+ +G +P LTG
Sbjct: 140 --SGPCLPHLLSRLCQDLGPGAFRL--AARMYLQKGFPIKEDFLEQSEQLFGAKPVSLTG 195
Query: 946 NSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDF 1125
DL +N WV+ T+GK+ LP + +LLL +F+G W KFD T + F
Sbjct: 196 KQEDDLANINQWVKEATEGKIQEFLSGLPEDTVLLLLNAIHFQGFWRNKFDPSLTQRDSF 255
Query: 1126 HLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEE 1305
HLDE+ TV V MM LR+ L ++A P +MS + +P N++ +
Sbjct: 256 HLDEQFTVPVEMMQARTYPLRWFLLEQPEIQVAHFPFKNNMSFVVLVPTHFEWNVSQVLA 315
Query: 1306 SLTSEFIHD---IDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLFDSQTL 1461
+L+ + +H +R K + +P+L L ++ +L ++ +L L LF + L
Sbjct: 316 NLSWDTLHPPLVWERPTK-----VRLPKLYLKHQMDLVATLSQLGLQELFQAPDL 365
>ref|NP_001159393.1| alpha-2-antiplasmin isoform b precursor [Homo sapiens].
Length = 427
Score = 107 bits (267), Expect = 3e-23
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Frame = +1
Query: 847 ASRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRE 1026
A+R+ +K IK F+ E+ +G +P LTG DL +N WV+ T+GK+
Sbjct: 99 AARMYLQKGFPIKEDFLEQSEQLFGAKPVSLTGKQEDDLANINQWVKEATEGKIQEFLSG 158
Query: 1027 LPGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSD 1206
LP + +LLL +F+G W KFD T + FHLDE+ TV V MM LR+ L
Sbjct: 159 LPEDTVLLLLNAIHFQGFWRNKFDPSLTQRDSFHLDEQFTVPVEMMQARTYPLRWFLLEQ 218
Query: 1207 LNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHD---IDRELKTVQAVLTVP 1377
++A P +MS + +P N++ + +L+ + +H +R K + +P
Sbjct: 219 PEIQVAHFPFKNNMSFVVLVPTHFEWNVSQVLANLSWDTLHPPLVWERPTK-----VRLP 273
Query: 1378 QLKLSYEGELTKSVQELKLPSLFDSQTL 1461
+L L ++ +L ++ +L L LF + L
Sbjct: 274 KLYLKHQMDLVATLSQLGLQELFQAPDL 301
>ref|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 100 bits (249), Expect = 4e-21
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 10/323 (3%)
Frame = +1
Query: 514 EGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXX 693
+G A T + +++ P F NK+ ++ F + LYR + +S + N+
Sbjct: 28 QGDAAQKTDTSHHDQDHPTF----NKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIAT 83
Query: 694 XXXXXXXXXEQRTESSLHRALYYDLISNPD--LHGTYKELLAAVTAP--QKNLKSASRII 861
+ T + L ++L P+ +H ++ELL + P Q L + + +
Sbjct: 84 AFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLF 143
Query: 862 FEKKLRIKASFVAPLEKSYGTRPRILT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGE 1038
+ L++ F+ ++K Y + + G++ +++N++V+ T+GK+ +EL +
Sbjct: 144 LSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRD 203
Query: 1039 ISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCK 1218
L+ +FKG+W F+ + T EDFH+D+ TVKVPMM R G+ + +CK
Sbjct: 204 TVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMK------RLGMFNIQHCK 257
Query: 1219 -----IAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQL 1383
+ + G+ + IFFLP + L +E LT + I A L +P+L
Sbjct: 258 KLSSWVLLMKYLGNATAIFFLPDE--GKLQHLENELTHDIITKFLENEDRRSASLHLPKL 315
Query: 1384 KLSYEGELTKSVQELKLPSLFDS 1452
++ +L + +L + +F +
Sbjct: 316 SITGTYDLKSVLGQLGITKVFSN 338
>ref|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 100 bits (249), Expect = 4e-21
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 10/323 (3%)
Frame = +1
Query: 514 EGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXX 693
+G A T + +++ P F NK+ ++ F + LYR + +S + N+
Sbjct: 28 QGDAAQKTDTSHHDQDHPTF----NKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIAT 83
Query: 694 XXXXXXXXXEQRTESSLHRALYYDLISNPD--LHGTYKELLAAVTAP--QKNLKSASRII 861
+ T + L ++L P+ +H ++ELL + P Q L + + +
Sbjct: 84 AFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLF 143
Query: 862 FEKKLRIKASFVAPLEKSYGTRPRILT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGE 1038
+ L++ F+ ++K Y + + G++ +++N++V+ T+GK+ +EL +
Sbjct: 144 LSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRD 203
Query: 1039 ISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCK 1218
L+ +FKG+W F+ + T EDFH+D+ TVKVPMM R G+ + +CK
Sbjct: 204 TVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMK------RLGMFNIQHCK 257
Query: 1219 -----IAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQL 1383
+ + G+ + IFFLP + L +E LT + I A L +P+L
Sbjct: 258 KLSSWVLLMKYLGNATAIFFLPDE--GKLQHLENELTHDIITKFLENEDRRSASLHLPKL 315
Query: 1384 KLSYEGELTKSVQELKLPSLFDS 1452
++ +L + +L + +F +
Sbjct: 316 SITGTYDLKSVLGQLGITKVFSN 338
>ref|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 100 bits (249), Expect = 4e-21
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 10/323 (3%)
Frame = +1
Query: 514 EGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXX 693
+G A T + +++ P F NK+ ++ F + LYR + +S + N+
Sbjct: 28 QGDAAQKTDTSHHDQDHPTF----NKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIAT 83
Query: 694 XXXXXXXXXEQRTESSLHRALYYDLISNPD--LHGTYKELLAAVTAP--QKNLKSASRII 861
+ T + L ++L P+ +H ++ELL + P Q L + + +
Sbjct: 84 AFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLF 143
Query: 862 FEKKLRIKASFVAPLEKSYGTRPRILT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGE 1038
+ L++ F+ ++K Y + + G++ +++N++V+ T+GK+ +EL +
Sbjct: 144 LSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRD 203
Query: 1039 ISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCK 1218
L+ +FKG+W F+ + T EDFH+D+ TVKVPMM R G+ + +CK
Sbjct: 204 TVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMK------RLGMFNIQHCK 257
Query: 1219 -----IAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQL 1383
+ + G+ + IFFLP + L +E LT + I A L +P+L
Sbjct: 258 KLSSWVLLMKYLGNATAIFFLPDE--GKLQHLENELTHDIITKFLENEDRRSASLHLPKL 315
Query: 1384 KLSYEGELTKSVQELKLPSLFDS 1452
++ +L + +L + +F +
Sbjct: 316 SITGTYDLKSVLGQLGITKVFSN 338
>ref|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 100 bits (249), Expect = 4e-21
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 10/323 (3%)
Frame = +1
Query: 514 EGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXX 693
+G A T + +++ P F NK+ ++ F + LYR + +S + N+
Sbjct: 28 QGDAAQKTDTSHHDQDHPTF----NKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIAT 83
Query: 694 XXXXXXXXXEQRTESSLHRALYYDLISNPD--LHGTYKELLAAVTAP--QKNLKSASRII 861
+ T + L ++L P+ +H ++ELL + P Q L + + +
Sbjct: 84 AFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLF 143
Query: 862 FEKKLRIKASFVAPLEKSYGTRPRILT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGE 1038
+ L++ F+ ++K Y + + G++ +++N++V+ T+GK+ +EL +
Sbjct: 144 LSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRD 203
Query: 1039 ISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCK 1218
L+ +FKG+W F+ + T EDFH+D+ TVKVPMM R G+ + +CK
Sbjct: 204 TVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMK------RLGMFNIQHCK 257
Query: 1219 -----IAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQL 1383
+ + G+ + IFFLP + L +E LT + I A L +P+L
Sbjct: 258 KLSSWVLLMKYLGNATAIFFLPDE--GKLQHLENELTHDIITKFLENEDRRSASLHLPKL 315
Query: 1384 KLSYEGELTKSVQELKLPSLFDS 1452
++ +L + +L + +F +
Sbjct: 316 SITGTYDLKSVLGQLGITKVFSN 338
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 61,812,966
Number of extensions: 1782998
Number of successful extensions: 7659
Number of sequences better than 1.0e-05: 58
Number of HSP's gapped: 7573
Number of HSP's successfully gapped: 59
Length of query: 525
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 418
Effective length of database: 14,770,016
Effective search space: 6173866688
Effective search space used: 6173866688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007429
(1577 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_035470.3| pigment epithelium-derived factor precursor [Mu... 514 e-155
Alignment gi|NP_032904.1| alpha-2-antiplasmin precursor [Mus musculus]. 119 7e-27
Alignment gi|NP_001161766.1| serine protease inhibitor A3F [Mus musculus]. 108 9e-24
Alignment gi|NP_001028507.2| serine protease inhibitor A3F [Mus musculus]. 108 9e-24
Alignment gi|NP_001161767.1| serine protease inhibitor A3F [Mus musculus]. 108 9e-24
Alignment gi|NP_033279.2| serine protease inhibitor A3M precursor [Mus mu... 108 9e-24
Alignment gi|NP_001186869.1| serine (or cysteine) peptidase inhibitor, cl... 107 3e-23
Alignment gi|XP_003085882.1| PREDICTED: serine protease inhibitor A3F iso... 107 3e-23
Alignment gi|XP_003085883.1| PREDICTED: serine protease inhibitor A3F iso... 107 3e-23
Alignment gi|NP_079705.2| leukocyte elastase inhibitor A [Mus musculus]. 103 4e-22
>ref|NP_035470.3| pigment epithelium-derived factor precursor [Mus musculus].
Length = 417
Score = 514 bits (1323), Expect(2) = e-155
Identities = 256/327 (78%), Positives = 286/327 (87%), Gaps = 1/327 (0%)
Frame = +1
Query: 490 SCQNA-GPEEGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANV 666
S QN EGSP PD+ G PVEEEDPFFKVPVNKLAAAVSNFGYDLYR+RSS SPT NV
Sbjct: 18 SSQNVPSSSEGSPVPDSTGEPVEEEDPFFKVPVNKLAAAVSNFGYDLYRLRSSASPTGNV 77
Query: 667 XXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLISNPDLHGTYKELLAAVTAPQKNLKS 846
E RTES +HRALYYDLI+NPD+H TYKELLA+VTAP+KNLKS
Sbjct: 78 LLSPLSVATALSALSLGAEHRTESVIHRALYYDLITNPDIHSTYKELLASVTAPEKNLKS 137
Query: 847 ASRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRE 1026
ASRI+FE+KLR+K+SFVAPLEKSYGTRPRILTGN R+DLQE+NNWVQAQ KGK+ARSTRE
Sbjct: 138 ASRIVFERKLRVKSSFVAPLEKSYGTRPRILTGNPRVDLQEINNWVQAQMKGKIARSTRE 197
Query: 1027 LPGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSD 1206
+P +SILLLGVAYFKGQWVTKFDSRKT+L+DFHLDE+RTV+VPMMSDPKA+LRYGLDSD
Sbjct: 198 MPSALSILLLGVAYFKGQWVTKFDSRKTTLQDFHLDEDRTVRVPMMSDPKAILRYGLDSD 257
Query: 1207 LNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLK 1386
LNCKIAQLPLTGSMSIIFFLPL VTQNLTMIEESLTSEFIHDIDRELKT+QAVLTVP+LK
Sbjct: 258 LNCKIAQLPLTGSMSIIFFLPLTVTQNLTMIEESLTSEFIHDIDRELKTIQAVLTVPKLK 317
Query: 1387 LSYEGELTKSVQELKLPSLFDSQTLAR 1467
LS+EGELTKS+Q++KL SLF+S ++
Sbjct: 318 LSFEGELTKSLQDMKLQSLFESPDFSK 344
Score = 55.1 bits (131), Expect(2) = e-155
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 1452 PDFSKIPGKPIKLTQVEHPIGFEWNENGGSATSAQG 1559
PDFSKI GKP+KLTQVEH FEWNE G ++ + G
Sbjct: 340 PDFSKITGKPVKLTQVEHRAAFEWNEEGAGSSPSPG 375
>ref|NP_032904.1| alpha-2-antiplasmin precursor [Mus musculus].
Length = 491
Score = 119 bits (298), Expect = 7e-27
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 1/292 (0%)
Frame = +1
Query: 589 KLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDL 768
+LA A+ F DL+ + + S ++N+ + +T SLHR L+ +
Sbjct: 81 RLAQAMMAFTTDLFSLVAQTSTSSNLVLSPLSVALALSHLALGAQNQTLHSLHRVLHMNT 140
Query: 769 ISN-PDLHGTYKELLAAVTAPQKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRILTG 945
S P L + + L T ++ A+RI +K IK F+ E+ +G +P LTG
Sbjct: 141 GSCLPHLLSHFYQNLGPGT-----IRLAARIYLQKGFPIKDDFLEQSERLFGAKPVKLTG 195
Query: 946 NSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDF 1125
DL +N WV+ T+GK+ ELP +LLL +F G W TKFD T + F
Sbjct: 196 KQEEDLANINQWVKEATEGKIEDFLSELPDSTVLLLLNAIHFHGFWRTKFDPSLTQKDFF 255
Query: 1126 HLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEE 1305
HLDE TV V MM LR+ L ++A P +MS + +P N++ +
Sbjct: 256 HLDERFTVSVDMMHAVSYPLRWFLLEQPEIQVAHFPFKNNMSFVVVMPTYFEWNVSEVLA 315
Query: 1306 SLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLFDSQTL 1461
+LT + ++ + + + L P+L L + +L ++ +L L LF L
Sbjct: 316 NLTWDTLYHPSLQERPTKVWL--PKLHLQQQLDLVATLSQLGLQELFQGPDL 365
>ref|NP_001161766.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 108 bits (271), Expect = 9e-24
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 6/294 (2%)
Frame = +1
Query: 592 LAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLI 771
LA++ ++F + LY+ ++P NV + T + L ++L
Sbjct: 37 LASSNTDFAFSLYKELVLKNPDENVVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 772 SNP--DLHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRIL 939
P D+H ++ LL ++ P Q + + S + EK L+I A F Y
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFIEKHLQILAEFKEKARALYQAEAFTA 156
Query: 940 TGNSRLDLQE-VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSL 1116
L+ + +N++V T+GK+ +L ++L+ YFKG+W FD T
Sbjct: 157 DFQQPLEATKLINDYVSNHTQGKIKELISDLDKRTLMVLVNYIYFKGKWEMPFDPDDTCK 216
Query: 1117 EDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTM 1296
+F+LDE R+VKVPMM Y D +L+C + +L TG+ S +F LP + +
Sbjct: 217 SEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTVVELKYTGNASAMFILPDQ--GKMQQ 274
Query: 1297 IEESLTSEFIHDIDRELK-TVQAVLTVPQLKLSYEGELTKSVQELKLPSLFDSQ 1455
+E SL E + + LK + L +P+ +S + L + EL + LF +Q
Sbjct: 275 VEASLQPETLRNWKDSLKPRLINELCLPKFSISTDYSLEHILPELGIRELFSTQ 328
>ref|NP_001028507.2| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 108 bits (271), Expect = 9e-24
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 6/294 (2%)
Frame = +1
Query: 592 LAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLI 771
LA++ ++F + LY+ ++P NV + T + L ++L
Sbjct: 37 LASSNTDFAFSLYKELVLKNPDENVVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 772 SNP--DLHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRIL 939
P D+H ++ LL ++ P Q + + S + EK L+I A F Y
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFIEKHLQILAEFKEKARALYQAEAFTA 156
Query: 940 TGNSRLDLQE-VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSL 1116
L+ + +N++V T+GK+ +L ++L+ YFKG+W FD T
Sbjct: 157 DFQQPLEATKLINDYVSNHTQGKIKELISDLDKRTLMVLVNYIYFKGKWEMPFDPDDTCK 216
Query: 1117 EDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTM 1296
+F+LDE R+VKVPMM Y D +L+C + +L TG+ S +F LP + +
Sbjct: 217 SEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTVVELKYTGNASAMFILPDQ--GKMQQ 274
Query: 1297 IEESLTSEFIHDIDRELK-TVQAVLTVPQLKLSYEGELTKSVQELKLPSLFDSQ 1455
+E SL E + + LK + L +P+ +S + L + EL + LF +Q
Sbjct: 275 VEASLQPETLRNWKDSLKPRLINELCLPKFSISTDYSLEHILPELGIRELFSTQ 328
>ref|NP_001161767.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 108 bits (271), Expect = 9e-24
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 6/294 (2%)
Frame = +1
Query: 592 LAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLI 771
LA++ ++F + LY+ ++P NV + T + L ++L
Sbjct: 37 LASSNTDFAFSLYKELVLKNPDENVVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 772 SNP--DLHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRIL 939
P D+H ++ LL ++ P Q + + S + EK L+I A F Y
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFIEKHLQILAEFKEKARALYQAEAFTA 156
Query: 940 TGNSRLDLQE-VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSL 1116
L+ + +N++V T+GK+ +L ++L+ YFKG+W FD T
Sbjct: 157 DFQQPLEATKLINDYVSNHTQGKIKELISDLDKRTLMVLVNYIYFKGKWEMPFDPDDTCK 216
Query: 1117 EDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTM 1296
+F+LDE R+VKVPMM Y D +L+C + +L TG+ S +F LP + +
Sbjct: 217 SEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTVVELKYTGNASAMFILPDQ--GKMQQ 274
Query: 1297 IEESLTSEFIHDIDRELK-TVQAVLTVPQLKLSYEGELTKSVQELKLPSLFDSQ 1455
+E SL E + + LK + L +P+ +S + L + EL + LF +Q
Sbjct: 275 VEASLQPETLRNWKDSLKPRLINELCLPKFSISTDYSLEHILPELGIRELFSTQ 328
>ref|NP_033279.2| serine protease inhibitor A3M precursor [Mus musculus].
Length = 418
Score = 108 bits (271), Expect = 9e-24
Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 6/294 (2%)
Frame = +1
Query: 592 LAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLI 771
LA+ ++F + LY+ + ++P N+ + T + L ++L
Sbjct: 47 LASINTDFAFSLYKKMALKNPDKNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLT 106
Query: 772 --SNPDLHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRIL 939
S D+H + LL ++ P Q + + + EK L+I A F Y T
Sbjct: 107 ETSEADIHQGFGHLLQRLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTA 166
Query: 940 TGNSRLDLQE-VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKTSL 1116
+ + +N++V QT+G + + EL ++L+ YFKG+W FD + T
Sbjct: 167 DFQQPTEATKLINDYVSNQTQGMIKKLISELDDRTLMVLVNYIYFKGKWKISFDPQDTFE 226
Query: 1117 EDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNLTM 1296
+F+LDE+R+VKVPMM R+ D +L+C + +L TG+ S +F LP + +
Sbjct: 227 SEFYLDEKRSVKVPMMKMKFLTTRHFRDEELSCSVLELKYTGNASALFILPDQ--GRMQQ 284
Query: 1297 IEESLTSEFIHDIDRELKTVQ-AVLTVPQLKLSYEGELTKSVQELKLPSLFDSQ 1455
+E SL E + + LKT + L +P+ +S + L + EL + +F Q
Sbjct: 285 VEASLQPETLRKWWKSLKTRKIGELYLPKFSISTDYNLKDILPELGIKEIFSKQ 338
>ref|NP_001186869.1| serine (or cysteine) peptidase inhibitor, clade A, member 3I [Mus
musculus].
Length = 408
Score = 107 bits (267), Expect = 3e-23
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 8/296 (2%)
Frame = +1
Query: 592 LAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLI 771
+A++ ++F + LYR ++P NV + T + L ++L
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 772 SNP--DLHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRIL 939
P D+H ++ LL ++ P Q + + S + EK L+I A F Y +
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALY--QAEAF 154
Query: 940 TGNSRLDLQE---VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKT 1110
T + Q +N++V QT+GK+ +L ++L+ YFKG+W FD R T
Sbjct: 155 TADFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDT 214
Query: 1111 SLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNL 1290
F+LDE+R+VKVPMM + Y D +L+C + +L TG+ S +F LP + +
Sbjct: 215 FNSKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQ--GKM 272
Query: 1291 TMIEESLTSEFIHDIDRELKTVQ-AVLTVPQLKLSYEGELTKSVQELKLPSLFDSQ 1455
+E SL E + LK + + L +P+ +S + L + L + +F Q
Sbjct: 273 QQVETSLHPETLRKWKNSLKPSRISELHLPKFSISNDYSLEHVLPVLGIREVFSMQ 328
>ref|XP_003085882.1| PREDICTED: serine protease inhibitor A3F isoform 1 [Mus musculus].
Length = 408
Score = 107 bits (267), Expect = 3e-23
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 8/296 (2%)
Frame = +1
Query: 592 LAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLI 771
+A++ ++F + LYR ++P NV + T + L ++L
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 772 SNP--DLHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRIL 939
P D+H ++ LL ++ P Q + + S + EK L+I A F Y +
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALY--QAEAF 154
Query: 940 TGNSRLDLQE---VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKT 1110
T + Q +N++V QT+GK+ +L ++L+ YFKG+W FD R T
Sbjct: 155 TADFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDT 214
Query: 1111 SLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNL 1290
F+LDE+R+VKVPMM + Y D +L+C + +L TG+ S +F LP + +
Sbjct: 215 FNSKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQ--GKM 272
Query: 1291 TMIEESLTSEFIHDIDRELKTVQ-AVLTVPQLKLSYEGELTKSVQELKLPSLFDSQ 1455
+E SL E + LK + + L +P+ +S + L + L + +F Q
Sbjct: 273 QQVETSLHPETLRKWKNSLKPSRISELHLPKFSISNDYSLEHILPVLGIREVFSMQ 328
>ref|XP_003085883.1| PREDICTED: serine protease inhibitor A3F isoform 2 [Mus musculus].
Length = 408
Score = 107 bits (267), Expect = 3e-23
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 8/296 (2%)
Frame = +1
Query: 592 LAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLI 771
+A++ ++F + LYR ++P NV + T + L ++L
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 772 SNP--DLHGTYKELLAAVTAP--QKNLKSASRIIFEKKLRIKASFVAPLEKSYGTRPRIL 939
P D+H ++ LL ++ P Q + + S + EK L+I A F Y +
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALY--QAEAF 154
Query: 940 TGNSRLDLQE---VNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKT 1110
T + Q +N++V QT+GK+ +L ++L+ YFKG+W FD R T
Sbjct: 155 TADFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDT 214
Query: 1111 SLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNL 1290
F+LDE+R+VKVPMM + Y D +L+C + +L TG+ S +F LP + +
Sbjct: 215 FNSKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQ--GKM 272
Query: 1291 TMIEESLTSEFIHDIDRELKTVQ-AVLTVPQLKLSYEGELTKSVQELKLPSLFDSQ 1455
+E SL E + LK + + L +P+ +S + L + L + +F Q
Sbjct: 273 QQVETSLHPETLRKWKNSLKPSRISELHLPKFSISNDYSLEHILPVLGIREVFSMQ 328
>ref|NP_079705.2| leukocyte elastase inhibitor A [Mus musculus].
Length = 379
Score = 103 bits (257), Expect = 4e-22
Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 12/315 (3%)
Frame = +1
Query: 583 VNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYY 762
+ +L++A + F +L++ + SPT N+ + T + L + ++
Sbjct: 1 MEQLSSANTLFALELFQTLNESSPTGNIFFSPFSISSALAMVILGAKGSTAAQLSKTFHF 60
Query: 763 DLISNPDLHGTYKELLAAVT--APQKNLKSASRIIFEKKLRIKASFVAPLEKSYGT--RP 930
D + D+H ++ L A V+ LK A+R+ EK ++A +K YG P
Sbjct: 61 DSVE--DIHSRFQSLNAEVSKRGASHTLKLANRLYGEKTYNFLPEYLASTQKMYGADLAP 118
Query: 931 RILTGNSRLDLQEVNNWVQAQTKGKVAR--STRELPGEISILLLGVAYFKGQWVTKFDSR 1104
S +E+N WV+ QT+GK+ S + ++L+ YFKG W KF +
Sbjct: 119 VDFLHASEDARKEINQWVKGQTEGKIPELLSVGVVDSMTKLVLVNAIYFKGMWEEKFMTE 178
Query: 1105 KTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLT-GSMSIIFFLPLKV- 1278
T+ F L ++ T V MM K +G SDL CK+ ++P G +S++ LP +
Sbjct: 179 DTTDAPFRLSKKDTKTVKMMYQKKK-FPFGYISDLKCKVLEMPYQGGELSMVILLPKDIE 237
Query: 1279 --TQNLTMIEESLTSEFIHDIDR--ELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLF 1446
+ L IE+ +T E + + + L+ + + +P+ K+ L ++ L + LF
Sbjct: 238 DESTGLKKIEKQITLEKLLEWTKRENLEFIDVHVKLPRFKIEESYTLNSNLGRLGVQDLF 297
Query: 1447 DSQTLARSRANLSNL 1491
S S+A+LS +
Sbjct: 298 SS-----SKADLSGM 307
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 51,821,759
Number of extensions: 1464059
Number of successful extensions: 6033
Number of sequences better than 1.0e-05: 78
Number of HSP's gapped: 5941
Number of HSP's successfully gapped: 79
Length of query: 525
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 419
Effective length of database: 12,433,743
Effective search space: 5209738317
Effective search space used: 5209738317
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007429
(1577 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001072130.1| pigment epithelium-derived factor [Sus scrof... 583 0.0
Alignment gi|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa]. 107 1e-23
Alignment gi|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa]. 103 3e-22
Alignment gi|XP_003128752.2| PREDICTED: serpin A12-like [Sus scrofa]. 102 6e-22
Alignment gi|XP_001928604.1| PREDICTED: plasma serine protease inhibitor-... 100 4e-21
Alignment gi|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa]. 96 6e-20
Alignment gi|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa]. 94 3e-19
Alignment gi|NP_001116666.1| plasma protease C1 inhibitor [Sus scrofa]. 91 1e-18
Alignment gi|XP_001929601.1| PREDICTED: heparin cofactor 2 [Sus scrofa]. 91 2e-18
Alignment gi|XP_003361568.1| PREDICTED: thyroxine-binding globulin-like [... 90 3e-18
>ref|NP_001072130.1| pigment epithelium-derived factor [Sus scrofa].
Length = 413
Score = 583 bits (1504), Expect(2) = 0.0
Identities = 301/326 (92%), Positives = 304/326 (93%)
Frame = +1
Query: 490 SCQNAGPEEGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVX 669
SCQNAGPEEGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANV
Sbjct: 18 SCQNAGPEEGSPAPDTVGAPVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSESPTANVL 77
Query: 670 XXXXXXXXXXXXXXXXXEQRTESSLHRALYYDLISNPDLHGTYKELLAAVTAPQKNLKSA 849
EQRTESSLHRALYYDLISNPDLHGTYKELLAAVTAPQKNLKSA
Sbjct: 78 LSPLSVATALSALSLGAEQRTESSLHRALYYDLISNPDLHGTYKELLAAVTAPQKNLKSA 137
Query: 850 SRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTREL 1029
SRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTREL
Sbjct: 138 SRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTREL 197
Query: 1030 PGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDL 1209
PGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDL
Sbjct: 198 PGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDL 257
Query: 1210 NCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKL 1389
NCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVP+LKL
Sbjct: 258 NCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPKLKL 317
Query: 1390 SYEGELTKSVQELKLPSLFDSQTLAR 1467
SYEGELTKSVQELKL SLFDS ++
Sbjct: 318 SYEGELTKSVQELKLQSLFDSPDFSK 343
Score = 74.7 bits (182), Expect(2) = 0.0
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +3
Query: 1452 PDFSKIPGKPIKLTQVEHPIGFEWNENGGSATSAQGPASPFP 1577
PDFSKI GKPIKLTQVEH IGFEWNE+GGSATS+ GP FP
Sbjct: 339 PDFSKITGKPIKLTQVEHRIGFEWNEDGGSATSSPGPRLTFP 380
>ref|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa].
Length = 423
Score = 107 bits (268), Expect = 1e-23
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Frame = +1
Query: 523 PAPDTVGAPVEEEDPFFKVPVNKLAAAVSN--FGYDLYRVRSSESPTANVXXXXXXXXXX 696
PA D V + K+P + A SN F + LY+ S P NV
Sbjct: 27 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 86
Query: 697 XXXXXXXXEQRTESSLHRALYYDLISNPD--LHGTYKELLAAVTAPQK--NLKSASRIIF 864
T + L L ++L P+ +H ++ LL A++ P L + +
Sbjct: 87 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 146
Query: 865 EKKLRIKASFVAPLEKSYGTRP-RILTGNSRLDLQEVNNWVQAQTKGKVARSTRELPGEI 1041
+++L++ FV + Y + I +S ++ +NN+V+ +TKGK+ ++L +
Sbjct: 147 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 206
Query: 1042 SILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKI 1221
++L+ YFK +W T FD T+ DFH+ + RTV+VPMM L Y D +L C +
Sbjct: 207 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 266
Query: 1222 AQLPLTGSMSIIFFLP 1269
+LP T + S +F LP
Sbjct: 267 VELPYTSNDSALFILP 282
>ref|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa].
Length = 423
Score = 103 bits (257), Expect = 3e-22
Identities = 81/323 (25%), Positives = 145/323 (44%), Gaps = 12/323 (3%)
Frame = +1
Query: 523 PAPDTVGAPVEEEDPFFKVPVNKLAAAVSN--FGYDLYRVRSSESPTANVXXXXXXXXXX 696
PA D V + K+P + A SN F + LY+ S P+ NV
Sbjct: 27 PADDLASKIVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 86
Query: 697 XXXXXXXXEQRTESSLHRALYYDLISNPD--LHGTYKELLAAVTAPQK--NLKSASRIIF 864
+ T + L L ++L P+ +H ++ LL A++ P L + +
Sbjct: 87 LAFLSLGAQGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 146
Query: 865 EKKLRIKASFVAPLEKSYG-----TRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTREL 1029
++ L++ FV + Y T + L RL +N++V+ +T+GK+ ++L
Sbjct: 147 DEHLKLLDKFVQDARELYHSEAFPTNFQDLEAARRL----INDYVKNKTEGKIVELIKKL 202
Query: 1030 PGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDL 1209
+L+ YFK QW+T FD T+ DF++ + +TVKVPMM + Y D +L
Sbjct: 203 FPRTVAVLVNYIYFKAQWMTHFDPNLTTEADFYVSKNKTVKVPMMGIKNLTVPYFRDEEL 262
Query: 1210 NCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQA-VLTVPQLK 1386
C + +LP T + S +F LP + +E +L E + L+ + L +P+
Sbjct: 263 ACTVVELPYTSNDSTLFILP--DDGRMAAVEANLLPEMLRRWRDSLQPRRIDALHLPRFS 320
Query: 1387 LSYEGELTKSVQELKLPSLFDSQ 1455
+S + +L + + L + +F ++
Sbjct: 321 ISSDYKLEEILPRLGIKEIFSAE 343
>ref|XP_003128752.2| PREDICTED: serpin A12-like [Sus scrofa].
Length = 414
Score = 102 bits (254), Expect = 6e-22
Identities = 73/293 (24%), Positives = 141/293 (48%), Gaps = 6/293 (2%)
Frame = +1
Query: 589 KLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYYDL 768
+LA ++FG+ LY+ S + N+ + T + + + +
Sbjct: 47 ELAKRNTDFGFRLYKKLSCNNSNKNIFFSPWSISVAFSMLTLGAQDSTLAEIKQGFNFRN 106
Query: 769 ISNPDLHGTYKELLAAVTAPQKN----LKSASRIIFEKKLRIKASFVAPLEKSY--GTRP 930
+ DLH + L+ + Q+N L + + +KKL+ + F+ ++ Y T P
Sbjct: 107 MPEKDLHEGFHYLINRLN--QRNHGHDLGLGNALFIDKKLKPQKKFLTDVKNLYKADTIP 164
Query: 931 RILTGNSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRKT 1110
I N +++N++V +T+GK++ +++ ILL+ +F+ +W +FD + T
Sbjct: 165 -INFRNLENAQRQINDYVNQKTQGKISNLVKKIDPSTLILLINYVFFQARWKHEFDPQAT 223
Query: 1111 SLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQNL 1290
EDF L+ RTVKVPMM +V G D L+C + ++P G++S +F LP + +
Sbjct: 224 KEEDFILEGNRTVKVPMMIH-SSVYAVGHDEQLSCTVLEMPFKGNLSALFILPDE--GEM 280
Query: 1291 TMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLFD 1449
+EE+L + L ++VP+L +S + +L K++ L + +F+
Sbjct: 281 KNVEEALGMNTFAKWKKLLNRSVTEVSVPRLSISSQYDLKKTLSSLSVTKIFE 333
>ref|XP_001928604.1| PREDICTED: plasma serine protease inhibitor-like [Sus scrofa].
Length = 408
Score = 99.8 bits (247), Expect = 4e-21
Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 13/326 (3%)
Frame = +1
Query: 553 EEEDPFFKVP--VNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQ 726
E + K+P V +A + +F +DLYR ++ SP NV +
Sbjct: 26 ETKKRVLKLPPAVATVAPGIRDFTFDLYRTLAAASPEQNVFFSPLSISMSLAMLSLGAQS 85
Query: 727 RTESSLHRALYYDLISNPD--LHGTYKELLAAVTAPQKNLK-SASRIIFEKK-LRIKASF 894
T++ + L + P+ LH + LL + P+++L+ S +F K L I+ +F
Sbjct: 86 STKAQILEGLGLNPQEGPEEELHSASQRLLRELGQPREDLQLSLGNALFTKPTLSIQEAF 145
Query: 895 VAPLEKSYGTRPRILTGNSRLDLQE-------VNNWVQAQTKGKVARSTRELPGEISILL 1053
+ L R R L D ++ +NN+V QTKGK+ + L G +++
Sbjct: 146 LGTL------RTRYLADVFPTDFEDPEGAQKQINNYVVKQTKGKIVDLVKGLDGTEVMVM 199
Query: 1054 LGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLP 1233
+ +FK +W T F+ + T +DFH+ E V+VPMM + Y LD +L+CK+ +P
Sbjct: 200 VNYIFFKAKWETSFNHKITHEQDFHVTSETVVRVPMMK-REDQFYYLLDRNLSCKVVGVP 258
Query: 1234 LTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTK 1413
G+ + F LP + + +E+ L + + + Q L +P+ + +L
Sbjct: 259 YQGNATAFFVLPQE--GGMEQVEKGLKEKTLRKWLKMSMKRQLELHLPKFSIEGSYQLEN 316
Query: 1414 SVQELKLPSLFDSQTLARSRANLSNL 1491
+ +L + +F S +N SN+
Sbjct: 317 VLPKLGIRDVFTSHADLTGISNTSNI 342
>ref|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa].
Length = 415
Score = 95.9 bits (237), Expect = 6e-20
Identities = 83/335 (24%), Positives = 146/335 (43%), Gaps = 12/335 (3%)
Frame = +1
Query: 523 PAPDTVGAPVEEEDPFFKVPVNKLAAAVSN--FGYDLYRVRSSESPTANVXXXXXXXXXX 696
PA D V +D K+P + A SN F + LY+ + +P NV
Sbjct: 22 PADDPASKIVTLKDQIKKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFSPLSVSMA 81
Query: 697 XXXXXXXXEQRTESSLHRALYYDLISNPD--LHGTYKELLAAVTAPQK--NLKSASRIIF 864
T + L L ++L P+ +H ++ LL+ + L+ + +
Sbjct: 82 LAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLRLGNAMFI 141
Query: 865 EKKLRIKASFVAPLEKSYG-----TRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTREL 1029
+++L + FV + Y T + L RL +N++V+ +T+GK+ ++L
Sbjct: 142 DEQLELLDKFVQDAHELYHSEAFPTNFQDLEAARRL----INDYVKNKTEGKIVDLFKKL 197
Query: 1030 PGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDL 1209
++L+ YFK +W T F+ T+ DFH+ + RTV+VPMM + Y D +L
Sbjct: 198 DPLTKVVLVNYIYFKAKWKTPFNPNLTTEADFHVSKNRTVRVPMMGIRALTVPYFRDEEL 257
Query: 1210 NCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAV-LTVPQLK 1386
C + +LP T + S +F LP + +E L E + L+ V L +P+
Sbjct: 258 ACTVVELPYTSNDSALFILP--DDGRMAAVEAKLLPETLRRWRDFLQPRWIVELYLPKFS 315
Query: 1387 LSYEGELTKSVQELKLPSLFDSQTLARSRANLSNL 1491
+S + L + + +L + +F ANLS +
Sbjct: 316 ISSDYRLHEILPQLGIEEIFG------DNANLSGI 344
>ref|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa].
Length = 393
Score = 93.6 bits (231), Expect = 3e-19
Identities = 79/319 (24%), Positives = 140/319 (43%), Gaps = 12/319 (3%)
Frame = +1
Query: 526 APDTVGAPVEEEDPFFKVPVNKLAAAVSN--FGYDLYRVRSSESPTANVXXXXXXXXXXX 699
A D V +D K+P + A SN F + LY+ + +P NV
Sbjct: 59 ADDPASKIVTLKDQIRKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFSPLSVSMAL 118
Query: 700 XXXXXXXEQRTESSLHRALYYDLISNPD--LHGTYKELLAAVTAPQK--NLKSASRIIFE 867
T + L L ++L P+ +H ++ LL+ + L+ + + +
Sbjct: 119 AFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLRLGNAMFID 178
Query: 868 KKLRIKASFVAPLEKSYG-----TRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRELP 1032
++L + FV + Y T + L RL +N++V+ +T+GK+ ++L
Sbjct: 179 EQLELLDKFVQDAHELYHSEAFPTNFQDLEAARRL----INDYVKNKTEGKIVDLFKKLD 234
Query: 1033 GEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLN 1212
++L+ YFK +W T FD T FH+ + RTVKVPMMS Y D +L
Sbjct: 235 PLTKVVLVNYIYFKAKWKTPFDPEHTIESTFHVSKNRTVKVPMMSLRGLETPYFRDEELA 294
Query: 1213 CKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQA-VLTVPQLKL 1389
C + +LP T + S +F LP + +E L E + L+ + L +P+ +
Sbjct: 295 CTVVELPYTSNDSALFILP--DDGRMAAVEAKLLPETLRRWRDSLQPRRIDALYLPRFSV 352
Query: 1390 SYEGELTKSVQELKLPSLF 1446
S + +L ++++L + +F
Sbjct: 353 SGDYQLKDTLKQLGIQKVF 371
>ref|NP_001116666.1| plasma protease C1 inhibitor [Sus scrofa].
Length = 492
Score = 91.3 bits (225), Expect = 1e-18
Identities = 50/199 (25%), Positives = 106/199 (53%), Gaps = 3/199 (1%)
Frame = +1
Query: 844 SASRIIFEKKLRIKASFVAPLEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTR 1023
S S+I L I+ +F+ + YG+ PR L +S ++L+ +N WV +T ++ +
Sbjct: 212 SVSQIFHSPDLAIRDTFLNASQSLYGSSPRTLGNDSNVNLELINAWVAEKTNHRINQLLN 271
Query: 1024 ELPGEISILLLGVAYFKGQWVTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDS 1203
LP E ++LL Y +W F+ +KTSLE F+ + +KV M++ K + + D
Sbjct: 272 SLPSETRLVLLNAIYLSAKWKVMFNHKKTSLEAFY-SKSSEIKVHMLTSKKYPVAHFTDP 330
Query: 1204 DLNCKIAQLPLTGSMSIIFFLPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLT---V 1374
L K+ +L L+ ++S++ +P + L +E++L++ + +L++ + T +
Sbjct: 331 TLKAKVGRLQLSHNLSLVILVPQTLKHRLEDMEKALSAPVFKAVMNKLESTKFYPTHFMM 390
Query: 1375 PQLKLSYEGELTKSVQELK 1431
P++K+ ++ +++L+
Sbjct: 391 PRIKIKGNQDMLPIMEKLE 409
>ref|XP_001929601.1| PREDICTED: heparin cofactor 2 [Sus scrofa].
Length = 495
Score = 90.9 bits (224), Expect = 2e-18
Identities = 67/302 (22%), Positives = 131/302 (43%), Gaps = 10/302 (3%)
Frame = +1
Query: 574 KVPVNKLAAAVSNFGYDLYR-VRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHR 750
K + +L + F ++LYR ++ S + N+ T +H
Sbjct: 116 KSRIQRLNILNAKFAFNLYRALKEQASASDNIFLAPVGISTAMGMLCLGLRGETHKQVHA 175
Query: 751 ALYYDLISNPD-------LHGTYKELLAAVTAPQ--KNLKSASRIIFEKKLRIKASFVAP 903
AL++ N +H +++L + L++ + + +++ I F
Sbjct: 176 ALHFTDFVNASSKYELGTIHNLFRKLTHRLFRRDFGYTLRAVNDLYVQRQFPILDDFRTK 235
Query: 904 LEKSYGTRPRILTGNSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQW 1083
+ + Y + L E N+ V TKG + + +++ +++L YFKG W
Sbjct: 236 VRQYYFAEVQAADFADPAFLSETNHHVARLTKGLIKDTLQDIDPATQMMILNCIYFKGSW 295
Query: 1084 VTKFDSRKTSLEDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFF 1263
V KF T +F L+E VKVPMM A L D +L+C+I QL G +S++
Sbjct: 296 VNKFPVEMTHNHNFRLNEREVVKVPMMQTKGAFLA-ASDQELDCEILQLDYVGGVSMLVV 354
Query: 1264 LPLKVTQNLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSL 1443
+P K++ + +E LT + + + + + +P+ KL + L ++++ + + +L
Sbjct: 355 VPHKLS-GMKTLEAQLTPQVVEKWQKSMTNRTREVLLPKFKLEKDYNLVEALRSVGVTAL 413
Query: 1444 FD 1449
FD
Sbjct: 414 FD 415
>ref|XP_003361568.1| PREDICTED: thyroxine-binding globulin-like [Sus scrofa].
Length = 420
Score = 90.1 bits (222), Expect = 3e-18
Identities = 70/294 (23%), Positives = 140/294 (47%), Gaps = 6/294 (2%)
Frame = +1
Query: 583 VNKLAAAVSNFGYDLYRVRSSESPTANVXXXXXXXXXXXXXXXXXXEQRTESSLHRALYY 762
++K+++ ++F ++LYR + E+P N+ T++ + +L Y
Sbjct: 46 LHKMSSINADFAFNLYRRFAVETPDQNIFFSPVSISAALAMLSFGACSSTQTQILESLGY 105
Query: 763 DLISNP--DLHGTYKELLAAVTAPQKNLK--SASRIIFEKKLRIKASFVAPLEKSYGTRP 930
+L P ++ ++ L+ ++ P+K L+ + + EK+L+ A F+ ++ Y T
Sbjct: 106 NLTEMPMAEIQQGFQHLICSLNFPKKELELQMGNALFIEKQLKPLAKFLDDVKNLYETEV 165
Query: 931 RILT-GNSRLDLQEVNNWVQAQTKGKVARSTRELPGEISILLLGVAYFKGQWVTKFDSRK 1107
N QE+N+ V+ QTKGK+ +L ++L+ FK QW FD K
Sbjct: 166 FSTDFSNVSAAQQELNSHVERQTKGKIVGLIPDLKPNTIMVLVNYICFKAQWANPFDPSK 225
Query: 1108 TSL-EDFHLDEERTVKVPMMSDPKAVLRYGLDSDLNCKIAQLPLTGSMSIIFFLPLKVTQ 1284
T F +D+ TV+VPMM + +D++LNC + Q+ + + +F LP +
Sbjct: 226 TEEGSSFLVDKTTTVQVPMMHQMEQYYNL-VDTELNCTVLQMDYSKNALALFVLPNE--G 282
Query: 1285 NLTMIEESLTSEFIHDIDRELKTVQAVLTVPQLKLSYEGELTKSVQELKLPSLF 1446
+ +E +++S+ + +R L+ L VP+ +S +L + ++ + F
Sbjct: 283 QMEWVEGAMSSKILKKWNRLLQKGWIDLFVPKFSMSATYDLGDILLKMGIQDAF 336
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 39,192,262
Number of extensions: 1151606
Number of successful extensions: 4912
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 4864
Number of HSP's successfully gapped: 33
Length of query: 525
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 421
Effective length of database: 8,754,644
Effective search space: 3685705124
Effective search space used: 3685705124
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007429
(1577 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|JH118861.1| Sus scrofa unplaced genomic scaffold ChrUScaf2983 603 e-169
>gb|JH118861.1| Sus scrofa unplaced genomic scaffold ChrUScaf2983
Length = 234064
Score = 603 bits (304), Expect = e-169
Identities = 304/304 (100%)
Strand = Plus / Minus
Query: 111 cgctcccaaccaggctggccaggctgcccgctccggtgggaaggccaggccccaaagctc 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227936 cgctcccaaccaggctggccaggctgcccgctccggtgggaaggccaggccccaaagctc 227877
Query: 171 ggtctggtggagcagctgggtgtgtgtggggggctgtctggggagctgtgctggaagggc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227876 ggtctggtggagcagctgggtgtgtgtggggggctgtctggggagctgtgctggaagggc 227817
Query: 231 agtagcgggttaaagttaacatgggaccatgatgcaatcacagactccaaattgagtgca 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227816 agtagcgggttaaagttaacatgggaccatgatgcaatcacagactccaaattgagtgca 227757
Query: 291 ggtcgctttaagaaaggagtagctgtaatctgaagcctgctggacgctggattaggaggc 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227756 ggtcgctttaagaaaggagtagctgtaatctgaagcctgctggacgctggattaggaggc 227697
Query: 351 agcagaaaaagccctggtgctcgcaggagcccctcagtgcacggacctaggctgggcgtg 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227696 agcagaaaaagccctggtgctcgcaggagcccctcagtgcacggacctaggctgggcgtg 227637
Query: 411 gagc 414
||||
Sbjct: 227636 gagc 227633
Score = 414 bits (209), Expect = e-113
Identities = 212/213 (99%)
Strand = Plus / Minus
Query: 1217 agatcgcccagctgcccttgaccggaagcatgagtatcatcttcttcctgcctctgaaag 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218885 agatcgcccagctgcccttgaccggaagcatgagtatcatcttcttcctgcctctgaaag 218826
Query: 1277 tgacccagaacctgaccatgatagaagagagcctcacctctgagttcattcacgacatag 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218825 tgacccagaacctgaccatgatagaagagagcctcacctctgagttcattcacgacatag 218766
Query: 1337 accgagaactgaagacggttcaagcggtcctgaccgtcccccagctgaaactgagttacg 1396
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 218765 accgagaactgaagacggttcaagcggtcctgaccgtccccaagctgaaactgagttacg 218706
Query: 1397 aaggcgaactcacgaagtctgtgcaggaactga 1429
|||||||||||||||||||||||||||||||||
Sbjct: 218705 aaggcgaactcacgaagtctgtgcaggaactga 218673
Score = 406 bits (205), Expect = e-110
Identities = 205/205 (100%)
Strand = Plus / Minus
Query: 872 agctgcggataaaagccagctttgttgcacccctggaaaagtcatacgggaccaggccca 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221777 agctgcggataaaagccagctttgttgcacccctggaaaagtcatacgggaccaggccca 221718
Query: 932 gaattctgaccggcaactcccgcttggaccttcaggaggttaacaactgggtgcaggctc 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221717 gaattctgaccggcaactcccgcttggaccttcaggaggttaacaactgggtgcaggctc 221658
Query: 992 agacgaaagggaaagtcgccaggtccacgcgggaactgcccggcgaaatcagcatcctcc 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221657 agacgaaagggaaagtcgccaggtccacgcgggaactgcccggcgaaatcagcatcctcc 221598
Query: 1052 ttcttggtgtggcttacttcaaggg 1076
|||||||||||||||||||||||||
Sbjct: 221597 ttcttggtgtggcttacttcaaggg 221573
Score = 285 bits (144), Expect = 4e-74
Identities = 144/144 (100%)
Strand = Plus / Minus
Query: 1075 gggcagtgggtaaccaagtttgactccaggaagacgtcgctggaggatttccacttggat 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220376 gggcagtgggtaaccaagtttgactccaggaagacgtcgctggaggatttccacttggat 220317
Query: 1135 gaggagagaaccgtgaaggtgcccatgatgtcagaccctaaggccgttttacgctacggc 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220316 gaggagagaaccgtgaaggtgcccatgatgtcagaccctaaggccgttttacgctacggc 220257
Query: 1195 ttggattctgatctcaactgcaag 1218
||||||||||||||||||||||||
Sbjct: 220256 ttggattctgatctcaactgcaag 220233
Score = 250 bits (126), Expect = 2e-63
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 515 agggctccccggcccctgacacggtgggggcgccagtggaggaggaggatcccttcttca 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222232 agggctccccggcccctgacacggtgggggcgccagtggaggaggaggatcccttcttca 222173
Query: 575 aggtccctgtgaacaagctggcggcggccgtctccaactttggttacgacctgtaccgag 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222172 aggtccctgtgaacaagctggcggcggccgtctccaactttggttacgacctgtaccgag 222113
Query: 635 tgagat 640
||||||
Sbjct: 222112 tgagat 222107
Score = 202 bits (102), Expect = 4e-49
Identities = 140/150 (93%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 1430 agctgccatccttgtttgattc-ccagactttagcaagatcccgggcaaacctatcaaac 1488
|||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 218204 agctgcaatccttgtttgattcaccagactttagcaagatcacgggcaaacctatcaaac 218145
Query: 1489 ttactcaggtggaacatcccattggctttgaatggaacgagaatgggggaagcgcca-ct 1547
||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||| ||
Sbjct: 218144 ttactcaagtggaacatcgcattggctttgagtggaacgaggatgggggaagcgccacct 218085
Query: 1548 tcagcccagggccccgcctcacctttcccc 1577
|||||||||||||||||||||||| ||||
Sbjct: 218084 ccagcccagggccccgcctcaccttccccc 218055
Score = 174 bits (88), Expect = 1e-40
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 1 ggaatggtgccaaggaccgggaaaaactcaagagccccagttctgggccagcctcttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228124 ggaatggtgccaaggaccgggaaaaactcaagagccccagttctgggccagcctcttctc 228065
Query: 61 tgctccagcctcctcctgggcctccccc 88
||||||||||||||||||||||||||||
Sbjct: 228064 tgctccagcctcctcctgggcctccccc 228037
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 41,579,444
Number of extensions: 333
Number of successful extensions: 333
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 331
Number of HSP's successfully gapped: 7
Length of query: 1577
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1555
Effective length of database: 2,808,408,574
Effective search space: 4367075332570
Effective search space used: 4367075332570
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)