Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007454
(1232 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776702.1| clathrin light chain B [Bos taurus]. 353 2e-97
Alignment gi|NP_776447.1| clathrin light chain A [Bos taurus]. 215 6e-56
>ref|NP_776702.1| clathrin light chain B [Bos taurus].
Length = 210
Score = 353 bits (905), Expect = 2e-97
Identities = 178/185 (96%), Positives = 179/185 (96%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFGAPAGSQ LAQPGPASGA EDMG TVNGDVFQ+ANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGSQGGLAQPGPASGAS-EDMGATVNGDVFQEANGPADG 85
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKV EQEWREKAKKDLEEWNQRQSEQ
Sbjct: 86 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQ 145
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ
Sbjct: 146 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 205
Query: 840 TPLSR 854
TPLSR
Sbjct: 206 TPLSR 210
>ref|NP_776447.1| clathrin light chain A [Bos taurus].
Length = 243
Score = 215 bits (548), Expect = 6e-56
Identities = 120/218 (55%), Positives = 142/218 (65%), Gaps = 35/218 (16%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGF-----GAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDAN 464
FLAQQESEIAGIENDE F GAP GSQ PG P+ + NGD +Q++N
Sbjct: 30 FLAQQESEIAGIENDEAFAILDGGAP-GSQPHGEPPGI-----PDAVDGVTNGDYYQESN 83
Query: 465 GPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQ 644
GP D YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+L+EW
Sbjct: 84 GPTDSYAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELDEWYA 143
Query: 645 RQSEQVEKNKINNR------------------------------ASEEAFVKESKEETPG 734
RQ EQ++K K NNR A+EEAFV + +E +PG
Sbjct: 144 RQDEQLQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIEESSPG 203
Query: 735 TEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 848
TEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 204 TEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 241
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 42,537,366
Number of extensions: 1291768
Number of successful extensions: 8680
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 8507
Number of HSP's successfully gapped: 2
Length of query: 410
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 305
Effective length of database: 14,207,134
Effective search space: 4333175870
Effective search space used: 4333175870
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007454
(1232 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_866115.1| PREDICTED: similar to clathrin, light polypepti... 363 e-100
Alignment gi|XP_546220.2| PREDICTED: similar to Clathrin light chain B (L... 352 5e-97
Alignment gi|XP_866083.1| PREDICTED: similar to clathrin, light polypepti... 347 1e-95
Alignment gi|XP_866050.1| PREDICTED: similar to clathrin, light polypepti... 331 1e-90
Alignment gi|XP_866066.1| PREDICTED: similar to clathrin, light polypepti... 325 4e-89
Alignment gi|XP_866787.1| PREDICTED: similar to clathrin, light polypepti... 230 2e-60
Alignment gi|XP_866825.1| PREDICTED: similar to Clathrin light chain A (L... 219 3e-57
Alignment gi|XP_866761.1| PREDICTED: similar to Clathrin light chain A (L... 219 6e-57
Alignment gi|XP_531996.2| PREDICTED: similar to Clathrin light chain A (L... 214 1e-55
Alignment gi|XP_866835.1| PREDICTED: similar to clathrin, light polypepti... 192 6e-49
>ref|XP_866115.1| PREDICTED: similar to clathrin, light polypeptide isoform a isoform
5 [Canis familiaris].
Length = 211
Score = 363 bits (931), Expect = e-100
Identities = 180/185 (97%), Positives = 182/185 (98%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFGAPAGS AALAQPGPA GAG EDMGTT+NGDVFQ+ANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGSHAALAQPGPAGGAGSEDMGTTINGDVFQEANGPADG 86
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 87 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 146
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ
Sbjct: 147 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
Query: 840 TPLSR 854
TPLSR
Sbjct: 207 TPLSR 211
>ref|XP_546220.2| PREDICTED: similar to Clathrin light chain B (Lcb) isoform 1 [Canis
familiaris].
Length = 229
Score = 352 bits (902), Expect = 5e-97
Identities = 180/203 (88%), Positives = 182/203 (89%), Gaps = 18/203 (8%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFGAPAGS AALAQPGPA GAG EDMGTT+NGDVFQ+ANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGSHAALAQPGPAGGAGSEDMGTTINGDVFQEANGPADG 86
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 87 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 146
Query: 660 VEKNKINNR------------------ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 785
VEKNKINNR ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS
Sbjct: 147 VEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 206
Query: 786 KQCKDVSRLRSVLMSLKQTPLSR 854
KQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 207 KQCKDVSRLRSVLMSLKQTPLSR 229
>ref|XP_866083.1| PREDICTED: similar to clathrin, light polypeptide isoform a isoform
4 [Canis familiaris].
Length = 213
Score = 347 bits (890), Expect = 1e-95
Identities = 176/187 (94%), Positives = 178/187 (95%), Gaps = 2/187 (1%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPG--PASGAGPEDMGTTVNGDVFQDANGPA 473
FLAQQESEIAGIENDEGFGAPAGS AALA P S AG EDMGTT+NGDVFQ+ANGPA
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGSHAALAHASACPPSTAGSEDMGTTINGDVFQEANGPA 86
Query: 474 DGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQS 653
DGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQS
Sbjct: 87 DGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQS 146
Query: 654 EQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSL 833
EQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSL
Sbjct: 147 EQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSL 206
Query: 834 KQTPLSR 854
KQTPLSR
Sbjct: 207 KQTPLSR 213
>ref|XP_866050.1| PREDICTED: similar to clathrin, light polypeptide isoform a isoform
2 [Canis familiaris].
Length = 208
Score = 331 bits (848), Expect = 1e-90
Identities = 169/185 (91%), Positives = 173/185 (93%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFGAPAG+ + GP G DMGTT+NGDVFQ+ANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGNSGE--EEGPRYGP-LGDMGTTINGDVFQEANGPADG 83
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 84 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 143
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ
Sbjct: 144 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 203
Query: 840 TPLSR 854
TPLSR
Sbjct: 204 TPLSR 208
>ref|XP_866066.1| PREDICTED: similar to clathrin, light polypeptide isoform a isoform
3 [Canis familiaris].
Length = 207
Score = 325 bits (834), Expect = 4e-89
Identities = 167/185 (90%), Positives = 169/185 (91%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFG G S AG EDMGTT+NGDVFQ+ANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGLSNGYCHVFV----LSLAGSEDMGTTINGDVFQEANGPADG 82
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 83 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 142
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ
Sbjct: 143 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 202
Query: 840 TPLSR 854
TPLSR
Sbjct: 203 TPLSR 207
>ref|XP_866787.1| PREDICTED: similar to clathrin, light polypeptide A isoform a
isoform 3 [Canis familiaris].
Length = 218
Score = 230 bits (586), Expect = 2e-60
Identities = 115/183 (62%), Positives = 137/183 (74%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G G G P+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGV-PDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
++K K NNRA+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ
Sbjct: 154 LQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQ 213
Query: 840 TPL 848
PL
Sbjct: 214 APL 216
>ref|XP_866825.1| PREDICTED: similar to Clathrin light chain A (Lca) isoform 6 [Canis
familiaris].
Length = 230
Score = 219 bits (559), Expect = 3e-57
Identities = 114/195 (58%), Positives = 137/195 (70%), Gaps = 12/195 (6%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G G G P+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGV-PDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINN------------RASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDV 803
++K K NN +A+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDV
Sbjct: 154 LQKTKANNSTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDV 213
Query: 804 SRLRSVLMSLKQTPL 848
SR+RSVL+SLKQ PL
Sbjct: 214 SRMRSVLISLKQAPL 228
>ref|XP_866761.1| PREDICTED: similar to Clathrin light chain A (Lca) isoform 2 [Canis
familiaris].
Length = 236
Score = 219 bits (557), Expect = 6e-57
Identities = 115/201 (57%), Positives = 137/201 (68%), Gaps = 18/201 (8%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G G G P+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGV-PDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNR------------------ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 785
++K K NNR A+EEAFV + E +PGTEWE+VA+LCDFNPKSS
Sbjct: 154 LQKTKANNRVADEAFYKQPFADVIGYVAAEEAFVNDIDESSPGTEWERVARLCDFNPKSS 213
Query: 786 KQCKDVSRLRSVLMSLKQTPL 848
KQ KDVSR+RSVL+SLKQ PL
Sbjct: 214 KQAKDVSRMRSVLISLKQAPL 234
>ref|XP_531996.2| PREDICTED: similar to Clathrin light chain A (Lca) isoform 1 [Canis
familiaris].
Length = 248
Score = 214 bits (545), Expect = 1e-55
Identities = 115/213 (53%), Positives = 137/213 (64%), Gaps = 30/213 (14%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G G G P+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGV-PDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNR------------------------------ASEEAFVKESKEETPGTEWEK 749
++K K NNR A+EEAFV + E +PGTEWE+
Sbjct: 154 LQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWER 213
Query: 750 VAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 848
VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 214 VARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 246
>ref|XP_866835.1| PREDICTED: similar to clathrin, light polypeptide A isoform a
isoform 7 [Canis familiaris].
Length = 139
Score = 192 bits (488), Expect = 6e-49
Identities = 91/132 (68%), Positives = 109/132 (82%)
Frame = +3
Query: 453 QDANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLE 632
+++NGP D YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LE
Sbjct: 6 RESNGPTDSYAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELE 65
Query: 633 EWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRL 812
EW RQ EQ++K K NNRA+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+
Sbjct: 66 EWYARQDEQLQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRM 125
Query: 813 RSVLMSLKQTPL 848
RSVL+SLKQ PL
Sbjct: 126 RSVLISLKQAPL 137
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,140,785
Number of extensions: 1267503
Number of successful extensions: 9662
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 9353
Number of HSP's successfully gapped: 14
Length of query: 410
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 305
Effective length of database: 15,374,224
Effective search space: 4689138320
Effective search space used: 4689138320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007454
(1232 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001825.1| clathrin light chain B isoform a [Homo sapiens]. 360 1e-99
Alignment gi|NP_009028.1| clathrin light chain B isoform b [Homo sapiens]. 349 3e-96
Alignment gi|NP_001824.1| clathrin light chain A isoform a [Homo sapiens]. 233 3e-61
Alignment gi|NP_001171689.1| clathrin light chain A isoform d [Homo sapie... 223 4e-58
Alignment gi|NP_001070145.1| clathrin light chain A isoform c [Homo sapie... 222 6e-58
Alignment gi|NP_009027.1| clathrin light chain A isoform b [Homo sapiens]. 217 2e-56
Alignment gi|NP_001171690.1| clathrin light chain A isoform e [Homo sapie... 147 2e-35
Alignment gi|NP_001171691.1| clathrin light chain A isoform f [Homo sapie... 140 3e-33
>ref|NP_001825.1| clathrin light chain B isoform a [Homo sapiens].
Length = 211
Score = 360 bits (925), Expect = 1e-99
Identities = 180/185 (97%), Positives = 181/185 (97%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFGAPAGS AA AQPGP SGAG EDMGTTVNGDVFQ+ANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQEANGPADG 86
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 87 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 146
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ
Sbjct: 147 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
Query: 840 TPLSR 854
TPLSR
Sbjct: 207 TPLSR 211
>ref|NP_009028.1| clathrin light chain B isoform b [Homo sapiens].
Length = 229
Score = 349 bits (896), Expect = 3e-96
Identities = 180/203 (88%), Positives = 181/203 (89%), Gaps = 18/203 (8%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFGAPAGS AA AQPGP SGAG EDMGTTVNGDVFQ+ANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQEANGPADG 86
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 87 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 146
Query: 660 VEKNKINNR------------------ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 785
VEKNKINNR ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS
Sbjct: 147 VEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 206
Query: 786 KQCKDVSRLRSVLMSLKQTPLSR 854
KQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 207 KQCKDVSRLRSVLMSLKQTPLSR 229
>ref|NP_001824.1| clathrin light chain A isoform a [Homo sapiens].
Length = 218
Score = 233 bits (594), Expect = 3e-61
Identities = 117/183 (63%), Positives = 139/183 (75%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
++K K NNRA+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ
Sbjct: 154 LQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQ 213
Query: 840 TPL 848
PL
Sbjct: 214 APL 216
>ref|NP_001171689.1| clathrin light chain A isoform d [Homo sapiens].
Length = 230
Score = 223 bits (567), Expect = 4e-58
Identities = 116/195 (59%), Positives = 139/195 (71%), Gaps = 12/195 (6%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINN------------RASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDV 803
++K K NN +A+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDV
Sbjct: 154 LQKTKANNSTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDV 213
Query: 804 SRLRSVLMSLKQTPL 848
SR+RSVL+SLKQ PL
Sbjct: 214 SRMRSVLISLKQAPL 228
>ref|NP_001070145.1| clathrin light chain A isoform c [Homo sapiens].
Length = 236
Score = 222 bits (565), Expect = 6e-58
Identities = 117/201 (58%), Positives = 139/201 (69%), Gaps = 18/201 (8%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNR------------------ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 785
++K K NNR A+EEAFV + E +PGTEWE+VA+LCDFNPKSS
Sbjct: 154 LQKTKANNRVADEAFYKQPFADVIGYVAAEEAFVNDIDESSPGTEWERVARLCDFNPKSS 213
Query: 786 KQCKDVSRLRSVLMSLKQTPL 848
KQ KDVSR+RSVL+SLKQ PL
Sbjct: 214 KQAKDVSRMRSVLISLKQAPL 234
>ref|NP_009027.1| clathrin light chain A isoform b [Homo sapiens].
Length = 248
Score = 217 bits (553), Expect = 2e-56
Identities = 117/213 (54%), Positives = 139/213 (65%), Gaps = 30/213 (14%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNR------------------------------ASEEAFVKESKEETPGTEWEK 749
++K K NNR A+EEAFV + E +PGTEWE+
Sbjct: 154 LQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWER 213
Query: 750 VAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 848
VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 214 VARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 246
>ref|NP_001171690.1| clathrin light chain A isoform e [Homo sapiens].
Length = 168
Score = 147 bits (371), Expect = 2e-35
Identities = 75/128 (58%), Positives = 90/128 (70%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINN 683
++K K NN
Sbjct: 154 LQKTKANN 161
>ref|NP_001171691.1| clathrin light chain A isoform f [Homo sapiens].
Length = 166
Score = 140 bits (352), Expect = 3e-33
Identities = 81/166 (48%), Positives = 99/166 (59%)
Frame = +3
Query: 351 FGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADGYAAIAQADRLTQEPESI 530
FGAPAG+ A +GAG ED + G + A A D P
Sbjct: 7 FGAPAGAPGGPALGNGVAGAGEEDPAAAFLAQQESEIAG-IENDEAFAILDGGAPGP--- 62
Query: 531 RKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVK 710
+ + DA S+ E EW+EKA K+LEEW RQ EQ++K K NNRA+EEAFV
Sbjct: 63 ----QPHGEPPGGPDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRAAEEAFVN 118
Query: 711 ESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 848
+ E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 119 DIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 164
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,875,219
Number of extensions: 1218523
Number of successful extensions: 8665
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 8402
Number of HSP's successfully gapped: 8
Length of query: 410
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 305
Effective length of database: 14,835,944
Effective search space: 4524962920
Effective search space used: 4524962920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007454
(1232 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_083146.1| clathrin light chain B [Mus musculus]. 351 8e-97
Alignment gi|NP_001073853.1| clathrin light chain A isoform a [Mus muscul... 232 5e-61
Alignment gi|NP_001073855.1| clathrin light chain A isoform d [Mus muscul... 227 1e-59
Alignment gi|NP_058040.2| clathrin light chain A isoform c [Mus musculus]. 221 1e-57
Alignment gi|NP_001073854.1| clathrin light chain A isoform b [Mus muscul... 216 3e-56
>ref|NP_083146.1| clathrin light chain B [Mus musculus].
Length = 211
Score = 351 bits (900), Expect = 8e-97
Identities = 176/185 (95%), Positives = 178/185 (96%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIEND GFGAPA SQ A AQPG ASGAG EDM TTVNGDVFQ+ANGPADG
Sbjct: 27 FLAQQESEIAGIENDPGFGAPAASQVASAQPGLASGAGSEDMSTTVNGDVFQEANGPADG 86
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQ+KRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 87 YAAIAQADRLTQEPESIRKWREEQKKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 146
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ
Sbjct: 147 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
Query: 840 TPLSR 854
TPLSR
Sbjct: 207 TPLSR 211
>ref|NP_001073853.1| clathrin light chain A isoform a [Mus musculus].
Length = 218
Score = 232 bits (591), Expect = 5e-61
Identities = 116/183 (63%), Positives = 139/183 (75%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI++ DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
++K K NNRA+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ
Sbjct: 154 LQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQ 213
Query: 840 TPL 848
PL
Sbjct: 214 APL 216
>ref|NP_001073855.1| clathrin light chain A isoform d [Mus musculus].
Length = 216
Score = 227 bits (579), Expect = 1e-59
Identities = 115/185 (62%), Positives = 138/185 (74%), Gaps = 2/185 (1%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGP--EDMGTTVNGDVFQDANGPA 473
FLAQQESEIAGIENDE F G PGP P + + +NG+ +Q++NGP
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGA-----PGPQPHGEPPGDAVDGVMNGEYYQESNGPT 89
Query: 474 DGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQS 653
D YAAI++ DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ
Sbjct: 90 DSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQD 149
Query: 654 EQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSL 833
EQ++K K NNRA+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SL
Sbjct: 150 EQLQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISL 209
Query: 834 KQTPL 848
KQ PL
Sbjct: 210 KQAPL 214
>ref|NP_058040.2| clathrin light chain A isoform c [Mus musculus].
Length = 236
Score = 221 bits (562), Expect = 1e-57
Identities = 116/201 (57%), Positives = 139/201 (69%), Gaps = 18/201 (8%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI++ DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNR------------------ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 785
++K K NNR A+EEAFV + E +PGTEWE+VA+LCDFNPKSS
Sbjct: 154 LQKTKANNRVADEAFYKQPFADLIGYVAAEEAFVNDIDESSPGTEWERVARLCDFNPKSS 213
Query: 786 KQCKDVSRLRSVLMSLKQTPL 848
KQ KDVSR+RSVL+SLKQ PL
Sbjct: 214 KQAKDVSRMRSVLISLKQAPL 234
>ref|NP_001073854.1| clathrin light chain A isoform b [Mus musculus].
Length = 248
Score = 216 bits (550), Expect = 3e-56
Identities = 116/213 (54%), Positives = 139/213 (65%), Gaps = 30/213 (14%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 93
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI++ DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 660 VEKNKINNR------------------------------ASEEAFVKESKEETPGTEWEK 749
++K K NNR A+EEAFV + E +PGTEWE+
Sbjct: 154 LQKTKANNRVADEAFYKQPFADLIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWER 213
Query: 750 VAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 848
VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 214 VARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 246
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,799,573
Number of extensions: 996830
Number of successful extensions: 6902
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 6617
Number of HSP's successfully gapped: 5
Length of query: 410
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 306
Effective length of database: 12,493,815
Effective search space: 3823107390
Effective search space used: 3823107390
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007454
(1232 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003354235.1| PREDICTED: clathrin light chain B-like isofo... 371 e-103
Alignment gi|XP_003123718.2| PREDICTED: clathrin light chain B-like isofo... 360 e-100
Alignment gi|XP_003122048.1| PREDICTED: clathrin light chain A isoform 1 ... 234 1e-61
Alignment gi|XP_003122049.1| PREDICTED: clathrin light chain A isoform 2 ... 223 1e-58
Alignment gi|XP_003122050.1| PREDICTED: clathrin light chain A isoform 3 ... 223 2e-58
Alignment gi|XP_003122051.1| PREDICTED: clathrin light chain A isoform 4 ... 218 5e-57
Alignment gi|XP_003353620.1| PREDICTED: clathrin light chain A [Sus scrof... 147 9e-36
Alignment gi|XP_001928095.3| PREDICTED: rho GTPase-activating protein 30 ... 49 4e-06
>ref|XP_003354235.1| PREDICTED: clathrin light chain B-like isoform 2 [Sus scrofa].
Length = 211
Score = 371 bits (953), Expect = e-103
Identities = 185/185 (100%), Positives = 185/185 (100%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 86
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 87 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 146
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ
Sbjct: 147 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
Query: 840 TPLSR 854
TPLSR
Sbjct: 207 TPLSR 211
>ref|XP_003123718.2| PREDICTED: clathrin light chain B-like isoform 1 [Sus scrofa].
Length = 229
Score = 360 bits (924), Expect = e-100
Identities = 185/203 (91%), Positives = 185/203 (91%), Gaps = 18/203 (8%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG
Sbjct: 27 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 86
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ
Sbjct: 87 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 146
Query: 660 VEKNKINNR------------------ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 785
VEKNKINNR ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS
Sbjct: 147 VEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 206
Query: 786 KQCKDVSRLRSVLMSLKQTPLSR 854
KQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 207 KQCKDVSRLRSVLMSLKQTPLSR 229
>ref|XP_003122048.1| PREDICTED: clathrin light chain A isoform 1 [Sus scrofa].
Length = 212
Score = 234 bits (596), Expect = 1e-61
Identities = 117/183 (63%), Positives = 140/183 (76%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 29 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 87
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 88 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 147
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
++K K NNRA+EEAFV + +E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ
Sbjct: 148 LQKTKANNRAAEEAFVNDIEESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQ 207
Query: 840 TPL 848
PL
Sbjct: 208 APL 210
>ref|XP_003122049.1| PREDICTED: clathrin light chain A isoform 2 [Sus scrofa].
Length = 224
Score = 223 bits (569), Expect = 1e-58
Identities = 116/195 (59%), Positives = 140/195 (71%), Gaps = 12/195 (6%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 29 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 87
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 88 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 147
Query: 660 VEKNKINN------------RASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDV 803
++K K NN +A+EEAFV + +E +PGTEWE+VA+LCDFNPKSSKQ KDV
Sbjct: 148 LQKTKANNSTNINHPCYSLEQAAEEAFVNDIEESSPGTEWERVARLCDFNPKSSKQAKDV 207
Query: 804 SRLRSVLMSLKQTPL 848
SR+RSVL+SLKQ PL
Sbjct: 208 SRMRSVLISLKQAPL 222
>ref|XP_003122050.1| PREDICTED: clathrin light chain A isoform 3 [Sus scrofa].
Length = 230
Score = 223 bits (567), Expect = 2e-58
Identities = 117/201 (58%), Positives = 140/201 (69%), Gaps = 18/201 (8%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 29 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 87
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 88 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 147
Query: 660 VEKNKINNR------------------ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 785
++K K NNR A+EEAFV + +E +PGTEWE+VA+LCDFNPKSS
Sbjct: 148 LQKTKANNRVADEAFYKQPFADVIGYVAAEEAFVNDIEESSPGTEWERVARLCDFNPKSS 207
Query: 786 KQCKDVSRLRSVLMSLKQTPL 848
KQ KDVSR+RSVL+SLKQ PL
Sbjct: 208 KQAKDVSRMRSVLISLKQAPL 228
>ref|XP_003122051.1| PREDICTED: clathrin light chain A isoform 4 [Sus scrofa].
Length = 242
Score = 218 bits (555), Expect = 5e-57
Identities = 117/213 (54%), Positives = 140/213 (65%), Gaps = 30/213 (14%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G A QP GP+ + +NG+ +Q++NGP D
Sbjct: 29 FLAQQESEIAGIENDEAFAILDGG-APGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDS 87
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 88 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 147
Query: 660 VEKNKINNR------------------------------ASEEAFVKESKEETPGTEWEK 749
++K K NNR A+EEAFV + +E +PGTEWE+
Sbjct: 148 LQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIEESSPGTEWER 207
Query: 750 VAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 848
VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 208 VARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 240
>ref|XP_003353620.1| PREDICTED: clathrin light chain A [Sus scrofa].
Length = 160
Score = 147 bits (372), Expect = 9e-36
Identities = 88/183 (48%), Positives = 101/183 (55%)
Frame = +3
Query: 300 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 479
FLAQQESEIAGIENDE F G PGP P GP
Sbjct: 29 FLAQQESEIAGIENDEAFAILDGGA-----PGPQPHGEPP--------------GGP--- 66
Query: 480 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 659
DA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 67 -------------------------------DANSRKQEAEWKEKAIKELEEWYARQDEQ 95
Query: 660 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 839
++K K NNRA+EEAFV + +E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ
Sbjct: 96 LQKTKANNRAAEEAFVNDIEESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQ 155
Query: 840 TPL 848
PL
Sbjct: 156 APL 158
>ref|XP_001928095.3| PREDICTED: rho GTPase-activating protein 30 isoform 1 [Sus scrofa].
Length = 1188
Score = 49.3 bits (116), Expect = 4e-06
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Frame = +3
Query: 342 DEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADGYAAIAQADRLTQEP 521
+E F + + L P P + GP + V G Q+A G DG A Q DR +E
Sbjct: 695 EEVFLSAYDDLSPLLGPKPLTWEGPGSLEEKVAGCGRQEAPGQGDGEQAF-QEDREGKEA 753
Query: 522 ESIRKW--REEQRKR----LQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINN 683
E +W REE +R ++ +A+ + E E +K L E ++E E + +
Sbjct: 754 EPGSRWDIREEAERRPKTEVEGEEASEEGVEPEGSQKVIDSLREGGGEETEDTEAKEEES 813
Query: 684 RASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKD 800
+ EE ESKEE G E V Q D + + + +D
Sbjct: 814 KGQEE---DESKEEVKGVEETGVEQGKDKEKERNTERED 849
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,315,037
Number of extensions: 945504
Number of successful extensions: 5649
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 5538
Number of HSP's successfully gapped: 8
Length of query: 410
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 309
Effective length of database: 8,829,335
Effective search space: 2728264515
Effective search space used: 2728264515
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007454
(1232 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 607 e-171
Sscrofa_Chr01 66 5e-08
>Sscrofa_Chr02
|| Length = 162569375
Score = 607 bits (306), Expect = e-171
Identities = 313/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 685 gggcatccgaggaggcttttgtgaaggaatccaaggaggagaccccaggtacagagtggg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83135872 gggcatccgaggaggcttttgtgaaggaatccaaggaggagaccccaggtacagagtggg 83135931
Query: 745 agaaggtggcccagctgtgtgacttcaaccccaagagcagcaagcaatgcaaagacgtgt 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83135932 agaaggtggcccagctgtgtgacttcaaccccaagagcagcaagcaatgcaaagacgtgt 83135991
Query: 805 cccgcctgcgctcggtgctcatgtccctgaagcagacaccactgtcccgctaggagcctg 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83135992 cccgcctgcgctcggtgctcatgtccctgaagcagacaccactgtcccgctaggagcctg 83136051
Query: 865 tcaccagcatggccgccaagcgggggcagggccgggcagagtaggagcagctgcttcggc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83136052 tcaccagcatggccgccaagcgggggcagggccgggcagagtaggagcagctgcttcggc 83136111
Query: 925 cagggtgggggaaaacgcctcctgtggctgctacacagcctatcccgttcctccccatct 984
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83136112 cagggt-ggggaaaacgcctcctgtggctgctacacagcctatcccgttcctccccatct 83136170
Query: 985 cccagggctgggaa 998
||||||||||||||
Sbjct: 83136171 cccagggctgggaa 83136184
Score = 458 bits (231), Expect = e-126
Identities = 231/231 (100%)
Strand = Plus / Plus
Query: 178 agagccaagggccaggcggacgcttcagcagagacgcggggaaaatggctgatgactttg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83066721 agagccaagggccaggcggacgcttcagcagagacgcggggaaaatggctgatgactttg 83066780
Query: 238 gcttcttctcgtcatcggagagcggggcccctgaggttgccgaggaggacccggcggctg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83066781 gcttcttctcgtcatcggagagcggggcccctgaggttgccgaggaggacccggcggctg 83066840
Query: 298 ccttcctggcccagcaggagagtgaaatcgcgggcatagagaatgacgagggcttcgggg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83066841 ccttcctggcccagcaggagagtgaaatcgcgggcatagagaatgacgagggcttcgggg 83066900
Query: 358 cacctgccggcagccaggcggccctcgcgcagccgggaccagcgagtgggg 408
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83066901 cacctgccggcagccaggcggccctcgcgcagccgggaccagcgagtgggg 83066951
Score = 278 bits (140), Expect = 7e-72
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 1 gcattcccgtcccggctcctcccgcttgccgccgcagtgacagggaagccgggcccggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83066544 gcattcccgtcccggctcctcccgcttgccgccgcagtgacagggaagccgggcccggtg 83066603
Query: 61 gcagagaggaagtgcggggccgccgcgccgagcccgtccccgccgaggccggctccccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83066604 gcagagaggaagtgcggggccgccgcgccgagcccgtccccgccgaggccggctccccca 83066663
Query: 121 ggcggctcgggtgacagtgt 140
||||||||||||||||||||
Sbjct: 83066664 ggcggctcgggtgacagtgt 83066683
Score = 238 bits (120), Expect = 6e-60
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 454 aggatgctaacggtccagctgatggctacgctgccattgcccaggcggacagactgactc 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83080258 aggatgctaacggtccagctgatggctacgctgccattgcccaggcggacagactgactc 83080317
Query: 514 aggaacccgagagcatccgcaagtggagagaggagcagcggaaacggctgcaagagctgg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83080318 aggaacccgagagcatccgcaagtggagagaggagcagcggaaacggctgcaagagctgg 83080377
Score = 226 bits (114), Expect = 2e-56
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 573 gatgctgcctccaaagtgacggaacaagagtggcgggagaaggccaagaaggacttggag 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83080579 gatgctgcctccaaagtgacggaacaagagtggcgggagaaggccaagaaggacttggag 83080638
Query: 633 gaatggaaccagcgccagagtgagcaagttgagaagaacaagatcaataaccgg 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83080639 gaatggaaccagcgccagagtgagcaagttgagaagaacaagatcaataaccgg 83080692
Score = 97.6 bits (49), Expect = 1e-17
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 408 gcaggtcctgaggacatggggaccacagtcaatggagatgtgtttcagg 456
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83072854 gcaggtcctgaggacatggggaccacagtcaatggagatgtgtttcagg 83072902
>Sscrofa_Chr01
|| Length = 315321322
Score = 65.9 bits (33), Expect = 5e-08
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 278 cgaggaggacccggcggctgccttcctggcccagcaggagagtgaaatcgcgggcataga 337
||||||||||||||| || |||||| |||| ||||||||||| || || || ||||| ||
Sbjct: 264772978 cgaggaggacccggccgcggccttcttggcgcagcaggagagcgagattgctggcatcga 264773037
Query: 338 gaatgacgagggcttcg 354
||| ||||||| |||||
Sbjct: 264773038 gaacgacgaggccttcg 264773054
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 25,757,717
Number of extensions: 197
Number of successful extensions: 197
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 196
Number of HSP's successfully gapped: 7
Length of query: 1232
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1211
Effective length of database: 2,808,413,156
Effective search space: 3400988331916
Effective search space used: 3400988331916
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)