Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007465
(1492 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029421.1| alcohol dehydrogenase class-3 [Bos taurus]. 691 0.0
Alignment gi|NP_001095529.1| alcohol dehydrogenase 4 [Bos taurus]. 458 e-129
Alignment gi|NP_001193316.1| alcohol dehydrogenase 1C (class I), gamma po... 445 e-125
Alignment gi|NP_001039522.1| alcohol dehydrogenase 6 [Bos taurus]. 408 e-114
Alignment gi|NP_001069311.1| class V alcohol dehydrogenase [Bos taurus]. 389 e-108
Alignment gi|NP_001032397.1| sorbitol dehydrogenase [Bos taurus]. 73 6e-13
Alignment gi|XP_002694150.1| PREDICTED: crystallin, zeta-like [Bos taurus]. 52 1e-06
>ref|NP_001029421.1| alcohol dehydrogenase class-3 [Bos taurus].
Length = 374
Score = 691 bits (1784), Expect = 0.0
Identities = 338/374 (90%), Positives = 349/374 (93%)
Frame = +3
Query: 141 MANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS 320
MANQVIKCKAAVAWEAGKPLSIEE+EVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG+
Sbjct: 1 MANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGN 60
Query: 321 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 500
+PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK
Sbjct: 61 YPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 501 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGY 680
GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG+STGY
Sbjct: 121 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 681 GAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASEC 860
GAA+N AKVEPGSTC IMGCK+AGA+RIIGVDINKDKFARAKEFGASEC
Sbjct: 181 GAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASEC 240
Query: 861 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEE 1040
INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW EE
Sbjct: 241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEE 300
Query: 1041 IATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFE 1220
IATRPFQLVTGRTWKGTAFGGWKSVES+PKLVSEYMSKKIKVDEFVTH+LPFDQINEAF+
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFD 360
Query: 1221 LMHAGKSIRTVIKL 1262
LMHAGKSIRTV+KL
Sbjct: 361 LMHAGKSIRTVVKL 374
>ref|NP_001095529.1| alcohol dehydrogenase 4 [Bos taurus].
Length = 380
Score = 458 bits (1178), Expect = e-129
Identities = 217/373 (58%), Positives = 277/373 (74%), Gaps = 4/373 (1%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
++IKCKAA+AWEA KPLS EE+EVAPPK HEVRI+IIATA+CH+DA+ L G FPV
Sbjct: 6 KIIKCKAAIAWEANKPLSNEEVEVAPPKDHEVRIQIIATALCHSDAHILHPQFEGGVFPV 65
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG---- 497
ILGHE AGIVES+G GVT K D VIPL+ PQCG+CKFCL+P+TN C K++ +
Sbjct: 66 ILGHEAAGIVESIGPGVTNFKPCDKVIPLHAPQCGKCKFCLSPRTNFCGKLKHFKNPMGD 125
Query: 498 KGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTG 677
+ LM DGTSRFTCKGK I H+MGTSTFS+YTVV+D+++AK++ A L++VCLLGC STG
Sbjct: 126 QKLMEDGTSRFTCKGKPIYHFMGTSTFSQYTVVSDVNLAKLEDDANLERVCLLGCAFSTG 185
Query: 678 YGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASE 857
YGA +N AKV PGSTC +MGCK +GASRII VDIN +KF +AK GA++
Sbjct: 186 YGAVINNAKVTPGSTCAIFGLGGVGLSAVMGCKASGASRIIVVDINSEKFTKAKALGATD 245
Query: 858 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXE 1037
C+NP+D KPIQEV++EMT+GGVD++FEC+G K+MRAAL++ GW
Sbjct: 246 CLNPKDLDKPIQEVIVEMTNGGVDFAFECVGGAKIMRAALDSVTVGWGVCTIIGVNVGDN 305
Query: 1038 EIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAF 1217
+ +L+ GRT GT+FGGWK V S+PKL ++Y +KK+ +D VTH LPFD++NEAF
Sbjct: 306 GLNVSAMELLMGRTLTGTSFGGWKGVTSVPKLAADYKNKKLDLDALVTHTLPFDKVNEAF 365
Query: 1218 ELMHAGKSIRTVI 1256
+LM+ GKSIRTV+
Sbjct: 366 DLMYQGKSIRTVL 378
>ref|NP_001193316.1| alcohol dehydrogenase 1C (class I), gamma polypeptide [Bos taurus].
Length = 375
Score = 445 bits (1145), Expect = e-125
Identities = 210/371 (56%), Positives = 276/371 (74%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV WE KP SIEE+EVAPPKAHEVRIK++AT +C +D + ++G+
Sbjct: 4 AGKVIKCKAAVLWELNKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVNGSLVT-RL 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
PV+LGHEGAGIVES+GEGVT ++ GD VIPL+IPQCG+C C +P+ NLC K ++ + +G
Sbjct: 63 PVVLGHEGAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCNVCKHPEANLCLKFQLKEPRG 122
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
+ DGT RFTC+GK I H++GTSTF++YTVV ++SVAKI +PL+KVCL+GCG STGYG
Sbjct: 123 TLNDGTCRFTCRGKPIHHFLGTSTFTQYTVVDEMSVAKIHADSPLEKVCLIGCGFSTGYG 182
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
+AV AKV GSTC IMGCK AGA+RII VDINKDKFARAK+ GA+ECI
Sbjct: 183 SAVKIAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIAVDINKDKFARAKQVGATECI 242
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
NPQD+ KPI+EVL E++ GGVD+SFE IG + M +AL C + + + I
Sbjct: 243 NPQDYEKPIEEVLKEVSGGGVDFSFEVIGRLDTMMSALLCCQEAYGVSVIVGVPPHAQNI 302
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
+ P L+TGRTWKG FGG+KS ES+PKLV+++M+KK +D+ +TH LP ++INE F+L
Sbjct: 303 SMNPMLLLTGRTWKGAIFGGFKSKESVPKLVTDFMAKKFSLDQLITHVLPLEKINEGFDL 362
Query: 1224 MHAGKSIRTVI 1256
+ +G S+RT++
Sbjct: 363 LRSGMSVRTIL 373
>ref|NP_001039522.1| alcohol dehydrogenase 6 [Bos taurus].
Length = 375
Score = 408 bits (1049), Expect = e-114
Identities = 207/372 (55%), Positives = 260/372 (69%), Gaps = 1/372 (0%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS-FP 326
+VI+CKAA+ W+ G SIEE+EVAPPKA EVRIK++ATA+C T+ L + + +P
Sbjct: 6 KVIRCKAAIVWKPGGSFSIEEVEVAPPKAKEVRIKMVATALCGTEMKMLKDKNLQHQHYP 65
Query: 327 VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 506
+I+GHEGAGIVESVGEGV+ +KAGD VI L++PQCGEC CLN N C K++ + L
Sbjct: 66 IIMGHEGAGIVESVGEGVSTVKAGDKVIALFLPQCGECTSCLNSADNFCIKLKQAETH-L 124
Query: 507 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGA 686
M DGTSRFTCKGK + H+ TSTFSEYTV+ +ISVAKID APL+KV L+ CG STGYG
Sbjct: 125 MSDGTSRFTCKGKPVYHFGNTSTFSEYTVMDEISVAKIDAAAPLEKVFLVSCGFSTGYGG 184
Query: 687 AVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN 866
A+NTAKV PGSTC IMGCK AGA+RII VDINKDKF +AKE GA+ECIN
Sbjct: 185 AINTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGATRIIAVDINKDKFEKAKEVGATECIN 244
Query: 867 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIA 1046
PQD+ KPIQEVL ++T GVD+SFE IGN + + AAL +C + ++
Sbjct: 245 PQDYEKPIQEVLFDLTGDGVDFSFEVIGNPETVAAALASCRES-HGVCVIIGLIIGVQLN 303
Query: 1047 TRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELM 1226
TGR+ KG+ +GGWK + KLVS+YM+KKI +D +TH+L D+INEA ELM
Sbjct: 304 ISGHLFFTGRSLKGSVYGGWKGRDGASKLVSDYMAKKINLDALITHSLNLDKINEAVELM 363
Query: 1227 HAGKSIRTVIKL 1262
GK +R V+ L
Sbjct: 364 KTGKCVRCVLLL 375
>ref|NP_001069311.1| class V alcohol dehydrogenase [Bos taurus].
Length = 375
Score = 389 bits (999), Expect = e-108
Identities = 187/373 (50%), Positives = 249/373 (66%)
Frame = +3
Query: 138 DMANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG 317
D + I C AA+AW+ LS+EE++V PPKA EVRIK+I+T +C +D + + G P
Sbjct: 2 DTLGKTITCLAAIAWKTNSSLSLEEVQVEPPKAGEVRIKMISTGICGSDDHAIKGIMPL- 60
Query: 318 SFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 497
+P I GHEGAG+VES+GEGV+ +K GD V+ L +PQC EC CLNPK N C+K +
Sbjct: 61 KYPFIPGHEGAGLVESIGEGVSSVKPGDKVLTLIVPQCRECSACLNPKGNFCEKQDILPS 120
Query: 498 KGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTG 677
GLM DGTSRFTCKG+ I H TSTFSEYTVV +ISV KID AP+DK+C++ C V TG
Sbjct: 121 SGLMLDGTSRFTCKGEKIYHSFRTSTFSEYTVVPEISVVKIDAAAPMDKICVISCEVPTG 180
Query: 678 YGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASE 857
YGAAV++AKV PGSTC +MGCK +GASRIIGVDIN++KF RA+ G ++
Sbjct: 181 YGAAVHSAKVTPGSTCVVFGLGGIGSAIVMGCKASGASRIIGVDINEEKFPRARALGVTD 240
Query: 858 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXE 1037
C+NP + KP+QE + EMT GVD++FE IG + M AA ++CH
Sbjct: 241 CLNPSNLKKPVQEAVKEMTGTGVDFAFEAIGLAETMVAAWDSCHVSHGVCIITGVSPPNS 300
Query: 1038 EIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAF 1217
+ + + TGRT KG G +K+ + P+LV+ Y+ KI +D +TH LPFDQ+++AF
Sbjct: 301 KFSLSAQTVSTGRTLKGVCLGDYKTKDCFPQLVTAYLQNKINIDPLITHQLPFDQLHKAF 360
Query: 1218 ELMHAGKSIRTVI 1256
+L HAGK+IR V+
Sbjct: 361 KLYHAGKTIRCVL 373
>ref|NP_001032397.1| sorbitol dehydrogenase [Bos taurus].
Length = 356
Score = 73.2 bits (178), Expect = 6e-13
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 12/366 (3%)
Frame = +3
Query: 198 LSIEEIEVAPPKAHEVRIKIIATAVCHTDA-YTLSG--ADPEGSFPVILGHEGAGIVESV 368
L +E + P +EV +K+ + +C +D Y G D P++LGHE +G V V
Sbjct: 19 LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKV 78
Query: 369 GEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS--RFTCK 539
G V L+ GD V I P+ + +FC + NL I PD + RF
Sbjct: 79 GSLVRHLQPGDRVAIEPGAPRETD-EFCKIGRYNLSPTIFFC---ATPPDDGNLCRFYKH 134
Query: 540 GKTILHYMGTS-TFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPG 716
+ + + TF E ++ +SV G+ A A V G
Sbjct: 135 NANFCYKLPDNVTFEEGALIEPLSV-----------------GIH-----ACRRAGVTLG 172
Query: 717 STCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI-----NPQDFS 881
+ ++ K GA++++ D++ + ++AKE GA + +PQ+ +
Sbjct: 173 NKVLVCGAGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIA 232
Query: 882 KPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIATRPFQ 1061
K ++ +L + + EC G ++A + A H G E+ + P
Sbjct: 233 KKVEGLL----GSKPEVTIECTGVETSIQAGIYATHSG----GTLVLVGLGSEMTSVP-- 282
Query: 1062 LVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMHAGKS 1241
LV T + G ++ + P +S SK + V VTH P ++ EAFE G
Sbjct: 283 LVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPLEKALEAFETSKKGLG 342
Query: 1242 IRTVIK 1259
++ +IK
Sbjct: 343 LKVMIK 348
>ref|XP_002694150.1| PREDICTED: crystallin, zeta-like [Bos taurus].
Length = 494
Score = 52.4 bits (124), Expect = 1e-06
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Frame = +3
Query: 165 KAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE-GSFPVILGH 341
+AA+ E +PL IEE+ P + HEVR+ + + D G E P G
Sbjct: 172 RAALCAELKRPLVIEEVTPRPVQPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGM 231
Query: 342 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQ---KIRVTQGKGL-M 509
E +G+V G V+ +K GD VI L G + C+ NL Q K+ + + L +
Sbjct: 232 EFSGMVLETGTDVSTVKEGDRVIGL-PGFSGMAEECITDHKNLWQIPEKVSLREAAALPV 290
Query: 510 PDGTSRF-------TCKGKTIL--HYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGC 662
GT+ F T G+T+L G + + V +I AK+ A D+ C L
Sbjct: 291 SYGTAIFALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQL-- 348
Query: 663 GVSTGYGAAVNTAK 704
+ +G ++VN ++
Sbjct: 349 AMQSGAQSSVNYSR 362
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 57,681,701
Number of extensions: 1574039
Number of successful extensions: 6503
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 6468
Number of HSP's successfully gapped: 7
Length of query: 497
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 391
Effective length of database: 14,174,046
Effective search space: 5542051986
Effective search space used: 5542051986
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007465
(1492 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_532181.2| PREDICTED: similar to Alcohol dehydrogenase cla... 689 0.0
Alignment gi|XP_852213.1| PREDICTED: similar to Alcohol dehydrogenase cla... 684 0.0
Alignment gi|XP_866573.1| PREDICTED: similar to Alcohol dehydrogenase cla... 606 e-173
Alignment gi|XP_535665.2| PREDICTED: similar to Alcohol dehydrogenase cla... 470 e-132
Alignment gi|XP_862312.1| PREDICTED: similar to Alcohol dehydrogenase cla... 469 e-132
Alignment gi|XP_862285.1| PREDICTED: similar to Alcohol dehydrogenase cla... 447 e-125
Alignment gi|XP_535667.2| PREDICTED: similar to Alcohol dehydrogenase gam... 445 e-125
Alignment gi|XP_866558.1| PREDICTED: similar to Alcohol dehydrogenase cla... 442 e-124
Alignment gi|XP_535666.2| PREDICTED: similar to Alcohol dehydrogenase 6 [... 388 e-108
Alignment gi|XP_544659.2| PREDICTED: similar to Sorbitol dehydrogenase (L... 67 3e-11
>ref|XP_532181.2| PREDICTED: similar to Alcohol dehydrogenase class III chi chain
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
isoform 1 [Canis familiaris].
Length = 374
Score = 689 bits (1779), Expect = 0.0
Identities = 338/374 (90%), Positives = 348/374 (93%)
Frame = +3
Query: 141 MANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS 320
MANQVIKCKAAVAWEAGKPLSIEE+EVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS
Sbjct: 1 MANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS 60
Query: 321 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 500
FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK
Sbjct: 61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 501 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGY 680
GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG+STGY
Sbjct: 121 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 681 GAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASEC 860
GAA+NTAKVEPGSTC IMGCKVAGASRIIGVDINKDKF+RAKEFGASEC
Sbjct: 181 GAALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASEC 240
Query: 861 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEE 1040
INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW EE
Sbjct: 241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEE 300
Query: 1041 IATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFE 1220
IATRPFQLVTGR WKGTAFGGWKSVES+PKLVSEYMS+KIKVDEFVTH+L FDQINEAF+
Sbjct: 301 IATRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFD 360
Query: 1221 LMHAGKSIRTVIKL 1262
L+HAGKSIRTV+KL
Sbjct: 361 LLHAGKSIRTVVKL 374
>ref|XP_852213.1| PREDICTED: similar to Alcohol dehydrogenase class III chi chain
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
[Canis familiaris].
Length = 488
Score = 684 bits (1764), Expect = 0.0
Identities = 335/371 (90%), Positives = 345/371 (92%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
QVIKCKAAVAWEAGKPLSIEE+EVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV
Sbjct: 118 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 177
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 509
ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM
Sbjct: 178 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 237
Query: 510 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAA 689
PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG+STGYGAA
Sbjct: 238 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 297
Query: 690 VNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECINP 869
+NTAKVEPGSTC IMGCKVAGASRIIGVDINKDKF+RAKEFGASECINP
Sbjct: 298 LNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECINP 357
Query: 870 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIAT 1049
QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW EEIAT
Sbjct: 358 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIAT 417
Query: 1050 RPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMH 1229
RPFQLVTGR WKGTAFGGWKSVES+PKLVSEYMS+KIKVDEFVTH+L FDQINEAF+L+H
Sbjct: 418 RPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFDLLH 477
Query: 1230 AGKSIRTVIKL 1262
AGKSIRTV+KL
Sbjct: 478 AGKSIRTVVKL 488
>ref|XP_866573.1| PREDICTED: similar to Alcohol dehydrogenase class III chi chain
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
isoform 3 [Canis familiaris].
Length = 328
Score = 606 bits (1562), Expect = e-173
Identities = 305/374 (81%), Positives = 314/374 (83%)
Frame = +3
Query: 141 MANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS 320
MANQVIKCKAAVAWEAGKPLSIEE+EVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS
Sbjct: 1 MANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS 60
Query: 321 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 500
FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK
Sbjct: 61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 501 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGY 680
GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG+STGY
Sbjct: 121 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 681 GAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASEC 860
GAA+NTAK FGASEC
Sbjct: 181 GAALNTAK----------------------------------------------FGASEC 194
Query: 861 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEE 1040
INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW EE
Sbjct: 195 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEE 254
Query: 1041 IATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFE 1220
IATRPFQLVTGR WKGTAFGGWKSVES+PKLVSEYMS+KIKVDEFVTH+L FDQINEAF+
Sbjct: 255 IATRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFD 314
Query: 1221 LMHAGKSIRTVIKL 1262
L+HAGKSIRTV+KL
Sbjct: 315 LLHAGKSIRTVVKL 328
>ref|XP_535665.2| PREDICTED: similar to Alcohol dehydrogenase class II pi chain
precursor isoform 2 [Canis familiaris].
Length = 379
Score = 470 bits (1209), Expect = e-132
Identities = 228/373 (61%), Positives = 279/373 (74%), Gaps = 4/373 (1%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
+VIKCKAA+AWE GKPL IEEIEVAPPKAHEVR++IIATA+CHTDA+ +S E FPV
Sbjct: 6 KVIKCKAAIAWETGKPLCIEEIEVAPPKAHEVRVQIIATALCHTDAHPISPKFKEALFPV 65
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG---- 497
ILGHEGAGIVESVG GVT K GD VIPLY+P C +CKFCLNP TNLC+K+ + +
Sbjct: 66 ILGHEGAGIVESVGPGVTNFKPGDKVIPLYMPHCRKCKFCLNPLTNLCKKLSLVKNPIVD 125
Query: 498 KGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTG 677
+ LM D TSRFTCKGK I H+MGTSTF++YTVV+DI++AKID L++ CL GCG STG
Sbjct: 126 QELMEDKTSRFTCKGKPIYHFMGTSTFTQYTVVSDINLAKIDDDVNLERACLFGCGFSTG 185
Query: 678 YGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASE 857
YGAA+NTAKV PGSTC IMGCKVAGASRII +DIN +KF +AK G +E
Sbjct: 186 YGAAINTAKVTPGSTCAVFGLGGVGLSTIMGCKVAGASRIIAIDINNEKFTKAKALGITE 245
Query: 858 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXE 1037
C+NP+DF+KPIQEV+IEMT+GGVD++F+C G + MRAAL+ GW
Sbjct: 246 CLNPRDFNKPIQEVIIEMTNGGVDFAFDCAGGPEAMRAALDCTTVGWGSCTLIGVNSEMS 305
Query: 1038 EIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAF 1217
+ P +L+ GRT GT FGGWKS +SIPKLV++Y +KK +D VTH LPFD+INEAF
Sbjct: 306 RLTISPVELIMGRTINGTCFGGWKS-DSIPKLVTDYKNKKFDLDLLVTHTLPFDKINEAF 364
Query: 1218 ELMHAGKSIRTVI 1256
++M+ GKS+R V+
Sbjct: 365 DIMNQGKSLRIVL 377
>ref|XP_862312.1| PREDICTED: similar to Alcohol dehydrogenase class II pi chain
precursor isoform 4 [Canis familiaris].
Length = 376
Score = 469 bits (1207), Expect = e-132
Identities = 227/370 (61%), Positives = 277/370 (74%), Gaps = 1/370 (0%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
+VIKCKAA+AWE GKPL IEEIEVAPPKAHEVR++IIATA+CHTDA+ +S E FPV
Sbjct: 6 KVIKCKAAIAWETGKPLCIEEIEVAPPKAHEVRVQIIATALCHTDAHPISPKFKEALFPV 65
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 506
ILGHEGAGIVESVG GVT K GD VIPLY+P C +CKFCLNP TNLC+ + + + L
Sbjct: 66 ILGHEGAGIVESVGPGVTNFKPGDKVIPLYMPHCRKCKFCLNPLTNLCENLSIKRDNTQL 125
Query: 507 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGA 686
M D TSRFTCKGK I H+MGTSTF++YTVV+DI++AKID L++ CL GCG STGYGA
Sbjct: 126 MEDKTSRFTCKGKPIYHFMGTSTFTQYTVVSDINLAKIDDDVNLERACLFGCGFSTGYGA 185
Query: 687 AVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN 866
A+NTAKV PGSTC IMGCKVAGASRII +DIN +KF +AK G +EC+N
Sbjct: 186 AINTAKVTPGSTCAVFGLGGVGLSTIMGCKVAGASRIIAIDINNEKFTKAKALGITECLN 245
Query: 867 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIA 1046
P+DF+KPIQEV+IEMT+GGVD++F+C G + MRAAL+ GW +
Sbjct: 246 PRDFNKPIQEVIIEMTNGGVDFAFDCAGGPEAMRAALDCTTVGWGSCTLIGVNSEMSRLT 305
Query: 1047 TRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELM 1226
P +L+ GRT GT FGGWKS +SIPKLV++Y +KK +D VTH LPFD+INEAF++M
Sbjct: 306 ISPVELIMGRTINGTCFGGWKS-DSIPKLVTDYKNKKFDLDLLVTHTLPFDKINEAFDIM 364
Query: 1227 HAGKSIRTVI 1256
+ GKS+R V+
Sbjct: 365 NQGKSLRIVL 374
>ref|XP_862285.1| PREDICTED: similar to Alcohol dehydrogenase class II pi chain
precursor isoform 3 [Canis familiaris].
Length = 379
Score = 447 bits (1149), Expect = e-125
Identities = 221/373 (59%), Positives = 271/373 (72%), Gaps = 4/373 (1%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
+VIKCKAA+AWE GKPL IEEIEVAPPKAHEVR++IIATA+CHTDA+ +S E FPV
Sbjct: 6 KVIKCKAAIAWETGKPLCIEEIEVAPPKAHEVRVQIIATALCHTDAHPISPKFKEALFPV 65
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG---- 497
ILGHEGAGIVESVG GVT K GD VIPLY+P C +CKFCLNP TNLC+K+ + +
Sbjct: 66 ILGHEGAGIVESVGPGVTNFKPGDKVIPLYMPHCRKCKFCLNPLTNLCKKLSLVKNPIVD 125
Query: 498 KGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTG 677
+ LM D TSRFTCKGK I H+MGTSTF++YTVV+DI++AKID L++ CL GCG STG
Sbjct: 126 QELMEDKTSRFTCKGKPIYHFMGTSTFTQYTVVSDINLAKIDDDVNLERACLFGCGFSTG 185
Query: 678 YGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASE 857
YGAA+NTAKV PGSTC IMGCKVAGASRII +DIN +KF +AK G +E
Sbjct: 186 YGAAINTAKVTPGSTCAVFGLGGVGLSTIMGCKVAGASRIIAIDINNEKFTKAKALGITE 245
Query: 858 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXE 1037
C+NP+DF+KPIQEV+IEMT+G + ++RAAL+ GW
Sbjct: 246 CLNPRDFNKPIQEVIIEMTNGAGSLLLPLPLPLALLRAALDCTTVGWGSCTLIGVNSEMS 305
Query: 1038 EIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAF 1217
+ P +L+ GRT GT FGGWKS +SIPKLV++Y +KK +D VTH LPFD+INEAF
Sbjct: 306 RLTISPVELIMGRTINGTCFGGWKS-DSIPKLVTDYKNKKFDLDLLVTHTLPFDKINEAF 364
Query: 1218 ELMHAGKSIRTVI 1256
++M+ GKS+R V+
Sbjct: 365 DIMNQGKSLRIVL 377
>ref|XP_535667.2| PREDICTED: similar to Alcohol dehydrogenase gamma chain [Canis
familiaris].
Length = 375
Score = 445 bits (1145), Expect = e-125
Identities = 212/371 (57%), Positives = 276/371 (74%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV WE KP SIEE+EVAPPKAHEVRIK++A+ +C +D + ++GA
Sbjct: 4 AGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVASGICRSDDHVVTGALVV-PL 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
P+ILGHE AGIVES+GEGVT +K GD VIPL+ PQCG+C C +P+ NLC K +++ +G
Sbjct: 63 PIILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCNVCKHPQGNLCVKNDLSKPRG 122
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
+ DGT RFTC+GK I H++G STFS+YTVV + SVAKID +PL+KVCL+GCG STGYG
Sbjct: 123 TLQDGTIRFTCRGKPIYHFLGISTFSQYTVVDEFSVAKIDAASPLEKVCLIGCGFSTGYG 182
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
+AVN AKV PGSTC IMGCK AGA+RIIGVDINKDKFA+AKE GA+ECI
Sbjct: 183 SAVNVAKVTPGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECI 242
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
+PQD+ +PIQEVL E++ G VD+SFE IG + M AAL C + + + +
Sbjct: 243 SPQDYKEPIQEVLKEISGGSVDFSFEVIGRLDTMVAALSCCQESYGVSVIVGVPPNSQSL 302
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
+ P L+TGR+WKG FGG+KS +S+PKLV+++M+KK ++ +TH LPF++INE F+L
Sbjct: 303 SMNPMLLLTGRSWKGAIFGGFKSKDSVPKLVADFMAKKFPLESLITHVLPFEKINEGFDL 362
Query: 1224 MHAGKSIRTVI 1256
+ +GKSIRTV+
Sbjct: 363 LRSGKSIRTVL 373
>ref|XP_866558.1| PREDICTED: similar to Alcohol dehydrogenase class III chi chain
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
isoform 2 [Canis familiaris].
Length = 252
Score = 442 bits (1138), Expect = e-124
Identities = 217/252 (86%), Positives = 226/252 (89%)
Frame = +3
Query: 507 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGA 686
MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG+STGYGA
Sbjct: 1 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 60
Query: 687 AVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN 866
A+NTAKVEPGSTC IMGCKVAGASRIIGVDINKDKF+RAKEFGASECIN
Sbjct: 61 ALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECIN 120
Query: 867 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIA 1046
PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW EEIA
Sbjct: 121 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIA 180
Query: 1047 TRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELM 1226
TRPFQLVTGR WKGTAFGGWKSVES+PKLVSEYMS+KIKVDEFVTH+L FDQINEAF+L+
Sbjct: 181 TRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFDLL 240
Query: 1227 HAGKSIRTVIKL 1262
HAGKSIRTV+KL
Sbjct: 241 HAGKSIRTVVKL 252
>ref|XP_535666.2| PREDICTED: similar to Alcohol dehydrogenase 6 [Canis familiaris].
Length = 548
Score = 388 bits (997), Expect = e-108
Identities = 196/394 (49%), Positives = 257/394 (65%), Gaps = 8/394 (2%)
Frame = +3
Query: 84 PTLPGPCRMSASRCSQSEDM--------ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAH 239
P L P +S + E + A++ I C+AA+AW A LSIEE++V PPKA
Sbjct: 156 PALKSPRHLSPQAKKELETIQLAINHLQAHKTITCRAAIAWAANSTLSIEEVQVEPPKAG 215
Query: 240 EVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLY 419
EVRIK+ +T +C TD + + G FP I GHEGAGIVES+G+GVT +K GD V+ L
Sbjct: 216 EVRIKLASTGICGTDDHAIKGL-LSAIFPFIPGHEGAGIVESIGKGVTSVKPGDKVLTLI 274
Query: 420 IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 599
IPQC EC CL+PK N C+K V GLM DGTSRFTCKGK I H TSTF+EYTVV
Sbjct: 275 IPQCRECSSCLHPKGNFCEKQDVLPSSGLMLDGTSRFTCKGKKIYHSFRTSTFTEYTVVP 334
Query: 600 DISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKV 779
+I+VAKID AP+DKV L+ C V TGYGAAV++AKV GSTC +MGCK
Sbjct: 335 EIAVAKIDDAAPMDKVSLISCEVPTGYGAAVHSAKVTHGSTCVVFGLGGIGSAIVMGCKA 394
Query: 780 AGASRIIGVDINKDKFARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVK 959
+GASRIIGVDIN++KF RA+ G ++C+NPQ F KP+Q+V++EMT G D++FE IG
Sbjct: 395 SGASRIIGVDINEEKFPRARALGVTDCLNPQKFKKPVQQVVMEMTGVGADFAFEAIGLSD 454
Query: 960 VMRAALEACHKGWXXXXXXXXXXXXEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVS 1139
M AA ++CH+ + +++ +V+GRT KG G +K+ + I LV+
Sbjct: 455 TMLAAWDSCHRSYGVCLIVGVAPLNSKLSLDAPMIVSGRTMKGVCLGDYKTRDCIHHLVT 514
Query: 1140 EYMSKKIKVDEFVTHNLPFDQINEAFELMHAGKS 1241
+Y+ KI +D VTH LPFDQ+++AFEL HAGK+
Sbjct: 515 DYLQNKINIDPLVTHQLPFDQLHKAFELYHAGKT 548
>ref|XP_544659.2| PREDICTED: similar to Sorbitol dehydrogenase (L-iditol
2-dehydrogenase) [Canis familiaris].
Length = 356
Score = 67.4 bits (163), Expect = 3e-11
Identities = 83/361 (22%), Positives = 142/361 (39%), Gaps = 7/361 (1%)
Frame = +3
Query: 198 LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF----PVILGHEGAGIVES 365
L +E + P +EV +K+ + +C +D + G F P++LGHE +G V
Sbjct: 19 LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRI-GDFIVKKPMVLGHEASGTVVK 77
Query: 366 VGEGVTKLKAGDTVI--PLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCK 539
VG V LK+GD V P + + E FC + NL I PD
Sbjct: 78 VGSLVKHLKSGDRVAIEPGALREMDE--FCKIGRYNLSPSIFFC---ATPPDD------- 125
Query: 540 GKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGS 719
G Y + F Y + +++ + + PL S G A A + G+
Sbjct: 126 GNLCQFYKHNADFC-YKLPDNVTYEEGALIEPL----------SVGIHAC-RRAGITLGN 173
Query: 720 TCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN-PQDFSKPIQE 896
++ K GA +++ D++ + ++AKE GA + ++ K I
Sbjct: 174 KVLVCGAGPIGLVTLIVAKAMGAGQVLVTDLSASRLSKAKEVGADIVLQISKESPKEIAS 233
Query: 897 VLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIATRPFQLVTGR 1076
+ +M + + EC G +++ + A G E+ T P L
Sbjct: 234 KVEDMLGCKPEATIECTGVESAIQSGIYATRAG----GTLVLVGLGSEMTTVP--LTHAS 287
Query: 1077 TWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMHAGKSIRTVI 1256
T + G ++ + P +S SK + V VTH P ++ EAFE G ++ ++
Sbjct: 288 TREVDIKGVFRYCNTWPMAISMLASKAVNVKPLVTHRFPLEKALEAFETARKGTGLKVML 347
Query: 1257 K 1259
K
Sbjct: 348 K 348
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 60,143,184
Number of extensions: 1615339
Number of successful extensions: 6376
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 6323
Number of HSP's successfully gapped: 11
Length of query: 497
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 390
Effective length of database: 15,307,552
Effective search space: 5969945280
Effective search space used: 5969945280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007465
(1492 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000662.3| alcohol dehydrogenase class-3 [Homo sapiens]. 687 0.0
Alignment gi|NP_000659.2| alcohol dehydrogenase 1B [Homo sapiens]. 462 e-130
Alignment gi|NP_000658.1| alcohol dehydrogenase 1A [Homo sapiens]. 458 e-129
Alignment gi|NP_000661.2| alcohol dehydrogenase 4 [Homo sapiens]. 456 e-128
Alignment gi|NP_000660.1| alcohol dehydrogenase 1C [Homo sapiens]. 452 e-127
Alignment gi|NP_000664.2| alcohol dehydrogenase class 4 mu/sigma chain is... 427 e-119
Alignment gi|NP_001095940.1| alcohol dehydrogenase 6 isoform 1 [Homo sapi... 426 e-119
Alignment gi|NP_001159976.1| alcohol dehydrogenase class 4 mu/sigma chain... 426 e-119
Alignment gi|NP_000663.1| alcohol dehydrogenase 6 isoform 2 [Homo sapiens]. 421 e-117
>ref|NP_000662.3| alcohol dehydrogenase class-3 [Homo sapiens].
Length = 374
Score = 687 bits (1774), Expect = 0.0
Identities = 337/374 (90%), Positives = 347/374 (92%)
Frame = +3
Query: 141 MANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS 320
MAN+VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG
Sbjct: 1 MANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGC 60
Query: 321 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 500
FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK
Sbjct: 61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 501 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGY 680
GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG+STGY
Sbjct: 121 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 681 GAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASEC 860
GAAVNTAK+EPGS C IMGCKVAGASRIIGVDINKDKFARAKEFGA+EC
Sbjct: 181 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 240
Query: 861 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEE 1040
INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW EE
Sbjct: 241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 300
Query: 1041 IATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFE 1220
IATRPFQLVTGRTWKGTAFGGWKSVES+PKLVSEYMSKKIKVDEFVTHNL FD+IN+AFE
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFE 360
Query: 1221 LMHAGKSIRTVIKL 1262
LMH+GKSIRTV+K+
Sbjct: 361 LMHSGKSIRTVVKI 374
>ref|NP_000659.2| alcohol dehydrogenase 1B [Homo sapiens].
Length = 375
Score = 462 bits (1189), Expect = e-130
Identities = 221/371 (59%), Positives = 277/371 (74%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV WE KP SIE++EVAPPKA+EVRIK++A +CHTD + +SG +
Sbjct: 4 AGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSG-NLVTPL 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
PVILGHE AGIVESVGEGVT +K GD VIPL+ PQCG+C+ C NP++N C K + +G
Sbjct: 63 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRG 122
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
+ DGT RFTC+GK I H++GTSTFS+YTVV + +VAKID +PL+KVCL+GCG STGYG
Sbjct: 123 TLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 182
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
+AVN AKV PGSTC +MGCK AGA+RII VDINKDKFA+AKE GA+ECI
Sbjct: 183 SAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 242
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
NPQD+ KPIQEVL EMTDGGVD+SFE IG + M A+L CH+ + +
Sbjct: 243 NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNL 302
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
+ P L+TGRTWKG +GG+KS E IPKLV+++M+KK +D +TH LPF++INE F+L
Sbjct: 303 SINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDL 362
Query: 1224 MHAGKSIRTVI 1256
+H+GKSIRTV+
Sbjct: 363 LHSGKSIRTVL 373
>ref|NP_000658.1| alcohol dehydrogenase 1A [Homo sapiens].
Length = 375
Score = 458 bits (1178), Expect = e-129
Identities = 222/371 (59%), Positives = 274/371 (73%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV WE KP SIEE+EVAPPKAHEVRIK++A +C TD + +SG
Sbjct: 4 AGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVT-PL 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
PVILGHE AGIVESVGEGVT +K GD VIPL IPQCG+C+ C NP++N C K V+ +G
Sbjct: 63 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQG 122
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
+ DGTSRFTC+ K I H++G STFS+YTVV + +VAKID +PL+KVCL+GCG STGYG
Sbjct: 123 TLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 182
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
+AVN AKV PGSTC IMGCK AGA+RII VDINKDKFA+AKE GA+ECI
Sbjct: 183 SAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI 242
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
NPQD+ KPIQEVL EMTDGGVD+SFE IG + M A+L CH+ + +
Sbjct: 243 NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNL 302
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
+ P L+TGRTWKG GG+KS E +PKLV+++M+KK +D +TH LPF++INE F+L
Sbjct: 303 SMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGFDL 362
Query: 1224 MHAGKSIRTVI 1256
+H+GKSIRT++
Sbjct: 363 LHSGKSIRTIL 373
>ref|NP_000661.2| alcohol dehydrogenase 4 [Homo sapiens].
Length = 380
Score = 456 bits (1174), Expect = e-128
Identities = 220/373 (58%), Positives = 275/373 (73%), Gaps = 4/373 (1%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
+VIKCKAA+AWEAGKPL IEE+EVAPPKAHEVRI+IIAT++CHTDA + +FPV
Sbjct: 6 KVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPV 65
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-- 503
I+GHE AGIVES+G GVT +K GD VIPLY P C +CKFCL+P TNLC KI +
Sbjct: 66 IVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASD 125
Query: 504 --LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTG 677
LM D TSRFTCKGK + H+ GTSTFS+YTVV+DI++AKID A L++VCLLGCG STG
Sbjct: 126 QQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTG 185
Query: 678 YGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASE 857
YGAA+N AKV PGSTC +MGCK AGASRIIG+DIN +KF +AK GA++
Sbjct: 186 YGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATD 245
Query: 858 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXE 1037
C+NP+D KPIQEV+IE+T GGVD++ +C G + M+AAL+ GW +
Sbjct: 246 CLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSK 305
Query: 1038 EIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAF 1217
+ P +L+ GRT GT FGGWKSV+SIPKLV++Y +KK +D VTH LPFD+I+EAF
Sbjct: 306 GLTIFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAF 365
Query: 1218 ELMHAGKSIRTVI 1256
+LM+ GKS+RT++
Sbjct: 366 DLMNQGKSVRTIL 378
>ref|NP_000660.1| alcohol dehydrogenase 1C [Homo sapiens].
Length = 375
Score = 452 bits (1163), Expect = e-127
Identities = 218/371 (58%), Positives = 273/371 (73%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV WE KP SIEE+EVAPPKAHEVRIK++A +C +D + +SG +
Sbjct: 4 AGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSG-NLVTPL 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
PVILGHE AGIVESVGEGVT +K GD VIPL+ PQCG+C+ C NP++N C K + +G
Sbjct: 63 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRG 122
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
+ DGT RFTC GK I H++G STFS+YTVV + +VAKID +PL+KVCL+GCG STGYG
Sbjct: 123 TLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 182
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
+AV AKV PGSTC +MGCK AGA+RII VDINKDKFA+AKE GA+ECI
Sbjct: 183 SAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 242
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
NPQD+ KPIQEVL EMTDGGVD+SFE IG + M A+L CH+ + +
Sbjct: 243 NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNL 302
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
+ P L+TGRTWKG FGG+KS ES+PKLV+++M+KK +D +T+ LPF++INE F+L
Sbjct: 303 SINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNILPFEKINEGFDL 362
Query: 1224 MHAGKSIRTVI 1256
+ +GKSIRTV+
Sbjct: 363 LRSGKSIRTVL 373
>ref|NP_000664.2| alcohol dehydrogenase class 4 mu/sigma chain isoform 2 [Homo
sapiens].
Length = 386
Score = 427 bits (1098), Expect = e-119
Identities = 210/371 (56%), Positives = 265/371 (71%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV WE +P SIEEIEVAPPK EVRIKI+AT +C TD + + G F
Sbjct: 16 AGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKF 74
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
PVI+GHE GIVES+GEGVT +K GD VIPL++PQC EC C NP NLC + +T G+G
Sbjct: 75 PVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDIT-GRG 133
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
++ DGT+RFTCKGK + H+M TSTF+EYTVV + SVAKID AP +KVCL+GCG STGYG
Sbjct: 134 VLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYG 193
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
AAV T KV+PGSTC IMGCK AGASRIIG+D+NKDKF +A GA+ECI
Sbjct: 194 AAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI 253
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
+P+D +KPI EVL EMT V Y+FE IG+++ M AL +CH + + +
Sbjct: 254 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKML 313
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
P L TGRTWKG FGG KS + +PKLV+E+++KK +D+ +TH LPF +I+E FEL
Sbjct: 314 TYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFEL 373
Query: 1224 MHAGKSIRTVI 1256
+++G+SIRTV+
Sbjct: 374 LNSGQSIRTVL 384
>ref|NP_001095940.1| alcohol dehydrogenase 6 isoform 1 [Homo sapiens].
Length = 375
Score = 426 bits (1095), Expect = e-119
Identities = 204/371 (54%), Positives = 267/371 (71%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
QVI+CKAA+ W+ G P SIEE+EVAPPKA EVRIK++AT +C T+ L + +P
Sbjct: 6 QVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPT 65
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 509
ILGHEGAGIVES+GEGV+ +K GD VI L++PQCGEC CLN + N C + + ++ + LM
Sbjct: 66 ILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFCIQFKQSKTQ-LM 124
Query: 510 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAA 689
DGTSRFTCKGK+I H+ TSTF EYTV+ +ISVAKID +APL+KVCL+ CG STG+GAA
Sbjct: 125 SDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAA 184
Query: 690 VNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECINP 869
+NTAKV PGSTC +MGCK AGA+RIIGVD+NK+KF +A+E GA+EC+NP
Sbjct: 185 INTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNP 244
Query: 870 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIAT 1049
QD KPIQEVL +MTD G+D+ FE IGN+ V+ AAL +C++ + ++
Sbjct: 245 QDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPASVQLKI 304
Query: 1050 RPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMH 1229
+GR+ KG+ FGGWKS + IPKLV++YM++K+ +D +TH L D+INEA ELM
Sbjct: 305 SGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMK 364
Query: 1230 AGKSIRTVIKL 1262
GK IR ++ L
Sbjct: 365 TGKCIRCILLL 375
>ref|NP_001159976.1| alcohol dehydrogenase class 4 mu/sigma chain isoform 1 [Homo
sapiens].
Length = 394
Score = 426 bits (1095), Expect = e-119
Identities = 214/392 (54%), Positives = 271/392 (69%), Gaps = 7/392 (1%)
Frame = +3
Query: 102 CRMSASRCSQSEDMANQ-------VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKII 260
C +S ++ DM Q VIKCKAAV WE +P SIEEIEVAPPK EVRIKI+
Sbjct: 3 CLVSRHTVRETLDMVFQRMSVEAGVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKIL 62
Query: 261 ATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGEC 440
AT +C TD + + G FPVI+GHE GIVES+GEGVT +K GD VIPL++PQC EC
Sbjct: 63 ATGICRTDDHVIKGT-MVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCREC 121
Query: 441 KFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI 620
C NP NLC + +T G+G++ DGT+RFTCKGK + H+M TSTF+EYTVV + SVAKI
Sbjct: 122 NACRNPDGNLCIRSDIT-GRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKI 180
Query: 621 DPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRII 800
D AP +KVCL+GCG STGYGAAV T KV+PGSTC IMGCK AGASRII
Sbjct: 181 DDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRII 240
Query: 801 GVDINKDKFARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALE 980
G+D+NKDKF +A GA+ECI+P+D +KPI EVL EMT V Y+FE IG+++ M AL
Sbjct: 241 GIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALA 300
Query: 981 ACHKGWXXXXXXXXXXXXEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKI 1160
+CH + + + P L TGRTWKG FGG KS + +PKLV+E+++KK
Sbjct: 301 SCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKF 360
Query: 1161 KVDEFVTHNLPFDQINEAFELMHAGKSIRTVI 1256
+D+ +TH LPF +I+E FEL+++G+SIRTV+
Sbjct: 361 DLDQLITHVLPFKKISEGFELLNSGQSIRTVL 392
>ref|NP_000663.1| alcohol dehydrogenase 6 isoform 2 [Homo sapiens].
Length = 368
Score = 421 bits (1081), Expect = e-117
Identities = 201/363 (55%), Positives = 262/363 (72%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
QVI+CKAA+ W+ G P SIEE+EVAPPKA EVRIK++AT +C T+ L + +P
Sbjct: 6 QVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPT 65
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 509
ILGHEGAGIVES+GEGV+ +K GD VI L++PQCGEC CLN + N C + + ++ + LM
Sbjct: 66 ILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFCIQFKQSKTQ-LM 124
Query: 510 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAA 689
DGTSRFTCKGK+I H+ TSTF EYTV+ +ISVAKID +APL+KVCL+ CG STG+GAA
Sbjct: 125 SDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAA 184
Query: 690 VNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECINP 869
+NTAKV PGSTC +MGCK AGA+RIIGVD+NK+KF +A+E GA+EC+NP
Sbjct: 185 INTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNP 244
Query: 870 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIAT 1049
QD KPIQEVL +MTD G+D+ FE IGN+ V+ AAL +C++ + ++
Sbjct: 245 QDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPASVQLKI 304
Query: 1050 RPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMH 1229
+GR+ KG+ FGGWKS + IPKLV++YM++K+ +D +TH L D+INEA ELM
Sbjct: 305 SGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMK 364
Query: 1230 AGK 1238
GK
Sbjct: 365 TGK 367
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 59,243,945
Number of extensions: 1609614
Number of successful extensions: 6656
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 6586
Number of HSP's successfully gapped: 9
Length of query: 497
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 390
Effective length of database: 14,770,016
Effective search space: 5760306240
Effective search space used: 5760306240
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007465
(1492 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031436.2| alcohol dehydrogenase class-3 [Mus musculus]. 665 0.0
Alignment gi|NP_031435.1| alcohol dehydrogenase 1 [Mus musculus]. 454 e-128
Alignment gi|NP_033756.2| alcohol dehydrogenase class 4 mu/sigma chain [M... 435 e-122
Alignment gi|NP_036126.2| alcohol dehydrogenase 4 [Mus musculus]. 408 e-114
Alignment gi|XP_003086377.1| PREDICTED: alcohol dehydrogenase 1 [Mus musc... 397 e-110
Alignment gi|NP_081221.1| alcohol dehydrogenase 6A (class V) [Mus musculu... 380 e-105
Alignment gi|NP_666238.1| sorbitol dehydrogenase [Mus musculus]. 67 5e-11
>ref|NP_031436.2| alcohol dehydrogenase class-3 [Mus musculus].
Length = 374
Score = 665 bits (1715), Expect = 0.0
Identities = 324/374 (86%), Positives = 342/374 (91%)
Frame = +3
Query: 141 MANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS 320
MANQVI+CKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKI+ATAVCHTDAYTLSGADPEG
Sbjct: 1 MANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGC 60
Query: 321 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 500
FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK
Sbjct: 61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 501 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGY 680
GLMPDGTSRFTCKGK++ H+MGTSTFSEYTVVADISVAKIDP APLDKVCLLGCG+STGY
Sbjct: 121 GLMPDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGY 180
Query: 681 GAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASEC 860
GAAVNTAKVEPGSTC IMGCKVAGASRIIG+DINKDKFA+AKEFGASEC
Sbjct: 181 GAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASEC 240
Query: 861 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEE 1040
I+PQDFSK IQEVL+EMTDGGVDYSFECIGNVKVMR+ALEA HKGW EE
Sbjct: 241 ISPQDFSKSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEE 300
Query: 1041 IATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFE 1220
I+TRPFQLVTGRTWKGTAFGGWKSVES+PKLVSEYMSKKIKVDEFVT NL FDQIN+AF+
Sbjct: 301 ISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFD 360
Query: 1221 LMHAGKSIRTVIKL 1262
LMH+G SIRTV+K+
Sbjct: 361 LMHSGDSIRTVLKM 374
>ref|NP_031435.1| alcohol dehydrogenase 1 [Mus musculus].
Length = 375
Score = 454 bits (1169), Expect = e-128
Identities = 220/371 (59%), Positives = 277/371 (74%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV WE KP +IE+IEVAPPKAHEVRIK++AT VC +D + +SG
Sbjct: 4 AGKVIKCKAAVLWELHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHVVSGTLVT-PL 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
P +LGHEGAGIVESVGEGVT +K GD VIPL+ PQCGEC+ C +P++N C + + +G
Sbjct: 63 PAVLGHEGAGIVESVGEGVTCVKPGDKVIPLFSPQCGECRICKHPESNFCSRSDLLMPRG 122
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
+ +GTSRF+CKGK I +++ TSTFS+YTVV DI+VAKID +PLDKVCL+GCG STGYG
Sbjct: 123 TLREGTSRFSCKGKQIHNFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTGYG 182
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
+AV AKV PGSTC I+GCK AGA+RII VDINKDKFA+AKE GA+ECI
Sbjct: 183 SAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECI 242
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
NPQD+SKPIQEVL EMTDGGVD+SFE IG + M +AL +CH + +
Sbjct: 243 NPQDYSKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQNL 302
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
+ P L+ GRTWKG FGG+KS +S+PKLV+++M+KK +D +TH LPF++INEAF+L
Sbjct: 303 SMNPMLLLLGRTWKGAIFGGFKSKDSVPKLVADFMAKKFPLDPLITHVLPFEKINEAFDL 362
Query: 1224 MHAGKSIRTVI 1256
+ +GKSIRTV+
Sbjct: 363 LRSGKSIRTVL 373
>ref|NP_033756.2| alcohol dehydrogenase class 4 mu/sigma chain [Mus musculus].
Length = 374
Score = 435 bits (1118), Expect = e-122
Identities = 209/371 (56%), Positives = 266/371 (71%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV W +P SIEEIEVAPPKA EVR+KI+AT +C TD + + G+ F
Sbjct: 4 AGKVIKCKAAVLWGVNQPFSIEEIEVAPPKAKEVRVKILATGICRTDDHIIKGS-MVSKF 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
PVI+GHE G+VESVGEGVT ++ GD VIPL++PQC EC CLNP+ NLC + +T G+G
Sbjct: 63 PVIVGHEAVGVVESVGEGVTTVRPGDKVIPLFLPQCRECNACLNPEGNLCIRSDLT-GRG 121
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
++ DGT+RFTCKGK + H+M TSTF+EYTV+ + SVAK+D AP +K CL+GCG STGYG
Sbjct: 122 VLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGYG 181
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
AAV TAKV PGSTC IMGCK AGASRIIG+DINKDKF +A GA+ECI
Sbjct: 182 AAVKTAKVTPGSTCVVFGLGGVGLSVIMGCKAAGASRIIGIDINKDKFQKALAVGATECI 241
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
+P+D +KPI EVL +MT + Y+FE IG ++ M AL +CH + + +
Sbjct: 242 SPKDSTKPISEVLSDMTGNTIQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKML 301
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
P L TGRTWKG FGGWKS + +PKLV+E++ KK +D+ +TH LPF+ INE FEL
Sbjct: 302 TYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLDQLITHTLPFNNINEGFEL 361
Query: 1224 MHAGKSIRTVI 1256
+++GKSIRTV+
Sbjct: 362 LYSGKSIRTVL 372
>ref|NP_036126.2| alcohol dehydrogenase 4 [Mus musculus].
Length = 377
Score = 408 bits (1049), Expect = e-114
Identities = 201/375 (53%), Positives = 264/375 (70%), Gaps = 6/375 (1%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGS--F 323
+VIKCKAA+AW+ G PL IEEIEV+PPKA EVRI++IAT VC TD ++ DP+ F
Sbjct: 6 KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTD---INATDPKKKALF 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIR----VT 491
PV+LGHE AGIVESVG GVT K GD VIP + PQC CK CL+P TNLC K+R T
Sbjct: 63 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 122
Query: 492 QGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVS 671
+ LM D TSRFTCKG++I H+MG S+FS+YTVV++ ++A++D A L++VCL+GCG S
Sbjct: 123 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFS 182
Query: 672 TGYGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGA 851
+GYGAA+NTAKV P STC I+GCK+AGASRII +DIN +KF +AK GA
Sbjct: 183 SGYGAAINTAKVTPSSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 242
Query: 852 SECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXX 1031
++C+NP++ KP+Q+V+ E+T GGVDYS +C G + ++AA++ GW
Sbjct: 243 TDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD 302
Query: 1032 XEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINE 1211
I T ++ GR+ GT FGGWKSV+S+P LVS+Y +KK +D VTH LPF+ IN+
Sbjct: 303 KMTIPT--VDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESIND 360
Query: 1212 AFELMHAGKSIRTVI 1256
A +LM GKSIRT++
Sbjct: 361 AIDLMKEGKSIRTIL 375
>ref|XP_003086377.1| PREDICTED: alcohol dehydrogenase 1 [Mus musculus].
Length = 384
Score = 397 bits (1019), Expect = e-110
Identities = 190/381 (49%), Positives = 260/381 (68%)
Frame = +3
Query: 120 RCSQSEDMANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLS 299
+ S + ++ +I+C+AAVAW PLSIEE+EV PPKA EVR+KIIA+ +C TD +TL
Sbjct: 3 QASLATKTSSNIIRCRAAVAWTTNAPLSIEEVEVDPPKAGEVRVKIIASGICGTDNHTLE 62
Query: 300 GADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 479
G + FPVILGHEGAG+VES+G GVT +K GD V+ +P+C EC +CL PK N C+K
Sbjct: 63 GK-MKTPFPVILGHEGAGVVESIGPGVTTVKPGDKVLMFPLPECRECFYCLYPKGNFCEK 121
Query: 480 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 659
+ GLM DGTSRFTC+GK I + MGTSTF+EYTVV +I+VAKI+ AP+D VC++
Sbjct: 122 ENILSPTGLMLDGTSRFTCRGKKIYNIMGTSTFTEYTVVHEIAVAKIEAAAPMDTVCIMS 181
Query: 660 CGVSTGYGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAK 839
C V TG+GA NTA+V PGS+C +M CK +GA RIIGVDIN++KF RA+
Sbjct: 182 CAVPTGFGAVFNTAQVTPGSSCVVFGLGGIGSAIVMACKASGACRIIGVDINEEKFPRAR 241
Query: 840 EFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXX 1019
G ++C+NP KP+QEV+ EMT GVD++FE IG ++ M AAL++C++ +
Sbjct: 242 ALGVTDCLNPNKLKKPVQEVVKEMTGVGVDFAFEAIGLIETMVAALKSCNRSYGVCVIMG 301
Query: 1020 XXXXXEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFD 1199
+++ P L+ GRT K + GG+K+ + IPKLV++Y+ KKI +D +TH LPF
Sbjct: 302 VAPTGSQLSFDPLVLLPGRTLKSSVLGGYKTRDDIPKLVTDYVQKKINIDPLITHRLPFP 361
Query: 1200 QINEAFELMHAGKSIRTVIKL 1262
+INE F L+ GK IR V+ +
Sbjct: 362 KINEGFRLLREGKCIRCVLSM 382
>ref|NP_081221.1| alcohol dehydrogenase 6A (class V) [Mus musculus].
Length = 375
Score = 380 bits (975), Expect = e-105
Identities = 183/369 (49%), Positives = 253/369 (68%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
+ I C+AA+AW PLSIEE++V PPK+ EVRIK+I++ +C +D + L G + +FP+
Sbjct: 6 KTITCRAAIAWAKNSPLSIEEVQVEPPKSGEVRIKMISSGICGSDDHVLKG-ELVVNFPL 64
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 509
I GHEGAGIVESVG+GV +K GD V+ L IPQC EC CL+PK N C K V G+M
Sbjct: 65 IPGHEGAGIVESVGDGVCSMKPGDKVLILIIPQCRECDACLHPKGNFCYKQDVLPCSGVM 124
Query: 510 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAA 689
DGTSRF+C+G+ I H TS+F+EYTVV +I+ KID AP+DKVCL+ CG TGYGAA
Sbjct: 125 LDGTSRFSCRGQKIYHSFRTSSFTEYTVVPEIAAVKIDDAAPMDKVCLISCGFPTGYGAA 184
Query: 690 VNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECINP 869
VN+AKV PGSTC +MGCK +GASRIIGVDIN++KF RA+ G ++C+NP
Sbjct: 185 VNSAKVTPGSTCVVFGLGGVGSAIVMGCKASGASRIIGVDINEEKFPRARALGVTDCLNP 244
Query: 870 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIAT 1049
KP+QEV++EMT GVD++FE IG V M AA +C+ + +++
Sbjct: 245 NKLEKPVQEVVMEMTGVGVDFAFEAIGLVDTMVAAWNSCNNSYGVCLIAGLAPSDAQLSL 304
Query: 1050 RPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMH 1229
++++G+T KG G +K+ + IP++V++Y+ KI +D VT+ LPF+Q++EA EL H
Sbjct: 305 EAPKILSGKTLKGVCLGDYKTRDCIPQIVTDYLQNKINIDPLVTYQLPFNQLHEALELFH 364
Query: 1230 AGKSIRTVI 1256
+GK+IR V+
Sbjct: 365 SGKAIRCVL 373
>ref|NP_666238.1| sorbitol dehydrogenase [Mus musculus].
Length = 357
Score = 66.6 bits (161), Expect = 5e-11
Identities = 82/372 (22%), Positives = 139/372 (37%), Gaps = 18/372 (4%)
Frame = +3
Query: 198 LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF----PVILGHEGAGIVES 365
+ +E + ++V +K+ + +C +D + G F P++LGHE AG V
Sbjct: 20 IRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRI-GDFVVKKPMVLGHEAAGTVTK 78
Query: 366 VGEGVTKLKAGDTV-----IPLYIPQ-CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS- 524
VGE V LK GD V +P + + C ++ L P C PD +
Sbjct: 79 VGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFC---------ATPPDDGNL 129
Query: 525 -RFTCKGKTILHYMGTS-TFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNT 698
RF + + S TF E ++ +SV A
Sbjct: 130 CRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIY----------------------ACRR 167
Query: 699 AKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN---- 866
V G+ ++ K GA++++ D++ + +AKE GA I
Sbjct: 168 GSVSLGNKVLVCGAGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKE 227
Query: 867 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
PQ+ + ++ +L + + EC G ++ + A H G E+
Sbjct: 228 TPQEIASKVESLL----GSKPEVTIECTGAESSVQTGIYATHSG----GTLVIVGMGAEM 279
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
P LV + G ++ + P +S SK + V VTH P ++ EAFE
Sbjct: 280 VNLP--LVHAAIREVDIKGVFRYCNTWPMAISMLASKTLNVKPLVTHRFPLEKAVEAFET 337
Query: 1224 MHAGKSIRTVIK 1259
G ++ +IK
Sbjct: 338 AKKGVGLKVMIK 349
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 50,252,313
Number of extensions: 1353801
Number of successful extensions: 5248
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 5208
Number of HSP's successfully gapped: 7
Length of query: 497
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 392
Effective length of database: 12,463,779
Effective search space: 4885801368
Effective search space used: 4885801368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007465
(1492 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003129360.1| PREDICTED: alcohol dehydrogenase class-3-lik... 725 0.0
Alignment gi|XP_003129359.1| PREDICTED: alcohol dehydrogenase 4 [Sus scro... 461 e-130
Alignment gi|NP_001230868.1| alcohol dehydrogenase 1C (class I), gamma po... 448 e-126
Alignment gi|XP_003357116.1| PREDICTED: alcohol dehydrogenase class 4 mu/... 423 e-118
Alignment gi|XP_001927487.1| PREDICTED: sorbitol dehydrogenase [Sus scrof... 73 4e-13
>ref|XP_003129360.1| PREDICTED: alcohol dehydrogenase class-3-like [Sus scrofa].
Length = 385
Score = 725 bits (1871), Expect = 0.0
Identities = 361/385 (93%), Positives = 361/385 (93%)
Frame = +3
Query: 108 MSASRCSQSEDMANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDA 287
MSASRCSQSEDMANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDA
Sbjct: 1 MSASRCSQSEDMANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDA 60
Query: 288 YTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTN 467
YTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTN
Sbjct: 61 YTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTN 120
Query: 468 LCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKV 647
LCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKV
Sbjct: 121 LCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKV 180
Query: 648 CLLGCGVSTGYGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKF 827
CLLGCGVSTGYGAAVNTAKVEPGSTC IMGCKVAGASRIIGVDINKDKF
Sbjct: 181 CLLGCGVSTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF 240
Query: 828 ARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXX 1007
ARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW
Sbjct: 241 ARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 300
Query: 1008 XXXXXXXXXEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHN 1187
EEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHN
Sbjct: 301 VVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHN 360
Query: 1188 LPFDQINEAFELMHAGKSIRTVIKL 1262
LPFDQINEAFELMHAGKSIRTVIKL
Sbjct: 361 LPFDQINEAFELMHAGKSIRTVIKL 385
>ref|XP_003129359.1| PREDICTED: alcohol dehydrogenase 4 [Sus scrofa].
Length = 380
Score = 461 bits (1187), Expect = e-130
Identities = 219/373 (58%), Positives = 277/373 (74%), Gaps = 4/373 (1%)
Frame = +3
Query: 150 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 329
+VIKCKAA+AWEA KPL+IEE+EVAPPKAHEVRI+IIATA+CHTDA+ + FPV
Sbjct: 6 KVIKCKAAIAWEANKPLNIEEVEVAPPKAHEVRIQIIATALCHTDAHIIHPQYEGAFFPV 65
Query: 330 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG---- 497
ILGHE AGIVESVG GVT +K GD VIPLY+PQCG+CKFCL+P+TN C K++ +
Sbjct: 66 ILGHEAAGIVESVGPGVTNIKPGDKVIPLYLPQCGKCKFCLSPRTNFCGKLKNFRNPIDD 125
Query: 498 KGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTG 677
+ LM D TSRFTCKGK I H+MGTSTFS+YTVV+D+++ KID A L++VCLLGC STG
Sbjct: 126 QKLMEDETSRFTCKGKPIYHFMGTSTFSQYTVVSDVNLVKIDDDANLERVCLLGCAFSTG 185
Query: 678 YGAAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASE 857
YGA VNTAKV PGSTC ++GCK AGASRII +DI +KF +AK GA++
Sbjct: 186 YGAVVNTAKVTPGSTCAIFGLGGIGLSAVIGCKAAGASRIIVIDIKNEKFTKAKALGATD 245
Query: 858 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXE 1037
C+NP++ KPIQEV+IEMT+GGVD++FEC+G +MRAAL++ GW
Sbjct: 246 CLNPRELDKPIQEVIIEMTNGGVDFAFECVGGADIMRAALDSVTAGWGLCTIIGVNVGDS 305
Query: 1038 EIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAF 1217
+ +L+ GRT GT+FGGWK +S+PKL ++Y +KK +D V+H LPFD+INEAF
Sbjct: 306 GLRVSSVELIMGRTLNGTSFGGWKGTDSVPKLAADYKNKKFNLDALVSHTLPFDKINEAF 365
Query: 1218 ELMHAGKSIRTVI 1256
+LM+ GKSIRTV+
Sbjct: 366 DLMYQGKSIRTVL 378
>ref|NP_001230868.1| alcohol dehydrogenase 1C (class I), gamma polypeptide [Sus scrofa].
Length = 375
Score = 448 bits (1152), Expect = e-126
Identities = 213/371 (57%), Positives = 274/371 (73%)
Frame = +3
Query: 144 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 323
A +VIKCKAAV WE KP SIEE+EVAPPKA+EVRIK++AT +C +D + + G+
Sbjct: 4 AGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVHGSLVT-PL 62
Query: 324 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 503
P ILGHE AGIVES+GEGVT +K GD VIPL++PQCG+C C +P+ N C K +T+ +G
Sbjct: 63 PTILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANFCCKNDLTKPRG 122
Query: 504 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYG 683
+ DGTSRFTCKGK IL ++GTSTF++YTVV ++SVAKID +PL+KVCL+GCG STGYG
Sbjct: 123 TLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYG 182
Query: 684 AAVNTAKVEPGSTCXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI 863
+A+ AKV GSTC +MGCK AGA+RIIGVDINKDKFA+AKE GA+ECI
Sbjct: 183 SAIKVAKVTQGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDINKDKFAKAKEVGATECI 242
Query: 864 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEI 1043
NPQD+ KPIQEVL EM+ GGVD+SFE IG + M +AL C K + + I
Sbjct: 243 NPQDYEKPIQEVLQEMSGGGVDFSFEAIGRIDTMISALLCCQKAYGVSVIVGVPPNSQNI 302
Query: 1044 ATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFEL 1223
+ P L+ GRTW+G FGG+KS +S+PKLV+++M+KK + +TH LPF++INE FEL
Sbjct: 303 SINPMLLLNGRTWEGAIFGGFKSKDSVPKLVADFMAKKFSLGSLITHVLPFEKINEGFEL 362
Query: 1224 MHAGKSIRTVI 1256
+ +GKSIRT++
Sbjct: 363 LRSGKSIRTIL 373
>ref|XP_003357116.1| PREDICTED: alcohol dehydrogenase class 4 mu/sigma chain-like [Sus
scrofa].
Length = 549
Score = 423 bits (1087), Expect = e-118
Identities = 206/374 (55%), Positives = 266/374 (71%), Gaps = 4/374 (1%)
Frame = +3
Query: 147 NQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFP 326
++VIKCKAAV WE +P SIEEIEVAPPKA EVRIKI+AT +C TD + + G + FP
Sbjct: 56 SRVIKCKAAVLWEQKQPFSIEEIEVAPPKAKEVRIKILATGICRTDDHVIKG-EMVSKFP 114
Query: 327 VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 506
VI+GHE G+VES+G+GVT +K GD VIPL++PQC EC FC NP NLC + +T G+G+
Sbjct: 115 VIVGHEATGVVESIGDGVTTVKPGDKVIPLFLPQCRECSFCRNPDGNLCVRSDIT-GRGV 173
Query: 507 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGA 686
+ DGT+RFTCKG+ + H+M TST++EYTVV + SVAKID AP +KVCL+GCG STGYGA
Sbjct: 174 LADGTTRFTCKGQPVYHFMNTSTYTEYTVVDETSVAKIDDAAPPEKVCLIGCGFSTGYGA 233
Query: 687 AVNTAKVEPGSTCXXXXXXXXXXXX----IMGCKVAGASRIIGVDINKDKFARAKEFGAS 854
AV T KV PGSTC IMGCK+AGASRIIG+D+NKDKF +A GA+
Sbjct: 234 AVKTGKVTPGSTCVVFGLGRSGLSSGLSVIMGCKLAGASRIIGIDLNKDKFEKAMAVGAT 293
Query: 855 ECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXX 1034
ECI+P+D KPI EVL EMT V YSFE IG ++ M AL +C+ +
Sbjct: 294 ECISPKDSPKPISEVLSEMTGDTVGYSFEVIGRLETMIDALASCNMNYGVSVVVGAPPSA 353
Query: 1035 EEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEA 1214
+ + P L TGRTWKG FGGWKS + +PKLV+++++KK +D+ +TH LPF QINE
Sbjct: 354 KMLTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTDFLAKKFDLDQLITHILPFKQINEG 413
Query: 1215 FELMHAGKSIRTVI 1256
FEL+++G+S+ T++
Sbjct: 414 FELLYSGQSVLTLL 427
>ref|XP_001927487.1| PREDICTED: sorbitol dehydrogenase [Sus scrofa].
Length = 356
Score = 73.2 bits (178), Expect = 4e-13
Identities = 89/364 (24%), Positives = 149/364 (40%), Gaps = 10/364 (2%)
Frame = +3
Query: 198 LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF----PVILGHEGAGIVES 365
L +E + P +EV +K+ + +C +D + G+F P++LGHE +G V
Sbjct: 19 LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRI-GNFVVKKPMVLGHEASGTVVK 77
Query: 366 VGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKG 542
VG VT LK GD V I P+ + +FC + NL I PD G
Sbjct: 78 VGSLVTHLKPGDRVAIEPGAPRESD-EFCKIGRYNLSPTIFFC---ATPPDD-------G 126
Query: 543 KTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGST 722
Y S F Y + +++ + + PL S G A A V G+
Sbjct: 127 NLCRFYKHNSNFC-YKLPDNVTFEEGALIEPL----------SVGIHAC-RRAGVTLGNK 174
Query: 723 CXXXXXXXXXXXXIMGCKVAGASRIIGVDINKDKFARAKEFGASECI-----NPQDFSKP 887
++ K GA++++ D++ + ++AKE GA + +PQ+ +
Sbjct: 175 VFVCGAGPIGLVSLLVAKAMGAAQVVVSDLSAARLSKAKEVGADFILQISNESPQEIANQ 234
Query: 888 IQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWXXXXXXXXXXXXEEIATRPFQLV 1067
++ +L + + EC G ++A + A H G E+ + P LV
Sbjct: 235 VEGLL----GCKPEVTIECTGVEASIQAGIYATHSG----GTLVLVGLGSEMTSVP--LV 284
Query: 1068 TGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMHAGKSIR 1247
T + G ++ + P +S SK + V VTH P ++ EAFE G ++
Sbjct: 285 HAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPLEKALEAFETSKKGLGLK 344
Query: 1248 TVIK 1259
+IK
Sbjct: 345 VMIK 348
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 37,125,684
Number of extensions: 1010962
Number of successful extensions: 4140
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4123
Number of HSP's successfully gapped: 5
Length of query: 497
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 394
Effective length of database: 8,779,541
Effective search space: 3459139154
Effective search space used: 3459139154
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007465
(1492 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 1618 0.0
Sscrofa_Chr08 521 e-145
>Sscrofa_Chr02
|| Length = 162569375
Score = 1618 bits (816), Expect = 0.0
Identities = 1096/1184 (92%), Gaps = 7/1184 (0%)
Strand = Plus / Minus
Query: 128 gcagtcggaggacatggcgaaccaggtcatcaagtgcaaggctgcggttgcctgggaggc 187
|||||| |||||||||| | | |||||||||||||||| |||| || || |||||||||
Sbjct: 10610649 gcagtccgaggacatggtgtatcaggtcatcaagtgcagggctatgggtgtctgggaggc 10610590
Query: 188 tggaaagcctctctccatagaggagatagaggtggcacccccaaaggctcatgaagttcg 247
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10610589 tggaaagcctctctccatagaggagatagaggtggcatccccaaaggctcatgaagttcg 10610530
Query: 248 aattaagattattgccactgcagtttgccacactgatgcctataccctgagtggggctga 307
||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 10610529 aattaagattattgctactgcagtttgccacactgatgcccacaccctgagtggggctga 10610470
Query: 308 tcctgaagggagttttccagtgatcctgggacacgaaggtgctggaattgtggaaagtgt 367
||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||||
Sbjct: 10610469 tcctgaagggagttttccagtgatcttgggacatgaaggtgatagaattgtggaaagtgt 10610410
Query: 368 tggtgaaggagttactaagcttaaggcaggtgatactgtcatcccactttacatcccaca 427
||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 10610409 tggtgaaggagttactaagctaaaggcaggtgattctgtcatcccactttacatctcaca 10610350
Query: 428 gtgtggagaatgcaaattttgtctaaatcctaaaacaaacctttgccagaaaataagagt 487
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 10610349 gtgtggagaatgcaaattttgtctaaatcataaaacaaacctttgccagaaaataagagt 10610290
Query: 488 cactcaagggaaaggcttaatgccagatggcactagcagatttacttgtaaaggaaagac 547
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10610289 cactcaagggaaaggtttaatgccagatggcactagcagatttacttgtaaaggaaagac 10610230
Query: 548 aattttacattacatgggaaccagtaccttttctgaatacacagttgtggctgacatctc 607
|||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| | ||
Sbjct: 10610229 aattttacattacatgggaaccagcaccttttctgaatgcacag-tgtggctgataaatc 10610171
Query: 608 tgttgctaaaattgatcctttggcccctttggataaagtctgccttctgggttgtggcgt 667
||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |
Sbjct: 10610170 tgtgactaaaattgatcctttggcccctgtggataaagtgtgcc-tctgggttgtggcat 10610112
Query: 668 ttcaactggttatggtgcggctgtgaacactgccaaggtggagcctggctctacttgtgc 727
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10610111 ttcaactggttatggtgctgctgtgaacactgccaaggtggagcctggctctacttgtgc 10610052
Query: 728 tgtctttggcctgggaggagttggattggcagttatcatgggctgtaaggtggctggtgc 787
||||| ||||||||||||||||||||||||||||||||||||| ||||||| | |||||
Sbjct: 10610051 tgtctgtggcctgggaggagttggattggcagttatcatgggccgtaaggtagttggtgt 10609992
Query: 788 atcccggatcattggtgtggacatcaataaagataaattcgcaagggccaaggagtttgg 847
|||| ||||||||||||||||||||||||||||||||| || | || ||||||||||||
Sbjct: 10609991 atcctggatcattggtgtggacatcaataaagataaatccgga--ggacaaggagtttgg 10609934
Query: 848 agcttctgaatgtattaacccccaggatttcagtaaacctatccaggaagtgctcattga 907
||||| ||||| |||||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 10609933 agcttttgaatatattaa-ccccagggcttcagtaaacctatccaggaagtgcttgttga 10609875
Query: 908 gatgactgatgggggagtggactattcctttgagtgtattggtaacgtgaaagtcatgag 967
|||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 10609874 gatgactgattcgggagtggactattcctgtgagtgtattggtaaagtgaaagtcatgag 10609815
Query: 968 agcagcgctggaggcctgccacaaaggctggggtgtcagcgtggtggttggagtagctgc 1027
|||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 10609814 agcagcgctggaggtctgccacaaaggctgggacgttagcgtggtggttggagtagctgc 10609755
Query: 1028 ttcgggcgaagaaatcgccactcgtccattccagctggtcacaggccgcacatggaaagg 1087
||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 10609754 ttcaggtgaagaaatcgccactcgtccattccagctggtcacaggctgcacatggaaagg 10609695
Query: 1088 cactgcgtttggaggatggaagagtgtagaaagcatcccaaagttggtgtcagaatacat 1147
|||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 10609694 cactatgtttggaggatggaagagtgtagaaagcatcccaaagctggtgt-agaatacat 10609636
Query: 1148 gtccnnnnnnntaaaggttgatgaatttgtgactcacaatctgccttttgaccaaataaa 1207
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10609635 gtccaaaaaaataaaggttgatgaatttgtgactcacaatctgccttttgaccaaataaa 10609576
Query: 1208 cgaagcctttgaactgatgcatgcagggaaaagcatccgaacagtcataaagctttaaat 1267
|||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||
Sbjct: 10609575 cgaagcctttcaactgatgcatgcaggaaaaagcatctgaacagttgcaaagctttaaat 10609516
Query: 1268 tcaaaaagagaaaaatttgtccctccttgcacccaagtcttgtg 1311
||||||| ||||||||| | | |||||||||| | ||||||||
Sbjct: 10609515 tcaaaaa-agaaaaattcattcatccttgcacctaggtcttgtg 10609473
Score = 220 bits (111), Expect = 2e-54
Identities = 132/139 (94%)
Strand = Plus / Minus
Query: 1346 ctctttcaagttcacagcttccttagaccttcattaacctactctagggaataacgtttt 1405
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 10609470 ctctttcaagttcacagctcccttagaccttcattaacctactctagggaataatgtttt 10609411
Query: 1406 ctggataaatcacaagtctctaatcaaggacaagactcgtactgtcataagtctgttttc 1465
|||||||||||||| |||||||| |||||||||| || |||||||||||| |||||||||
Sbjct: 10609410 ctggataaatcacaggtctctaaccaaggacaaggctagtactgtcataaatctgttttc 10609351
Query: 1466 tggactcttcttcacataa 1484
|||||||||||||||||||
Sbjct: 10609350 tggactcttcttcacataa 10609332
>Sscrofa_Chr08
|| Length = 148491826
Score = 521 bits (263), Expect = e-145
Identities = 263/263 (100%)
Strand = Plus / Plus
Query: 703 aggtggagcctggctctacttgtgctgtctttggcctgggaggagttggattggcagtta 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130462205 aggtggagcctggctctacttgtgctgtctttggcctgggaggagttggattggcagtta 130462264
Query: 763 tcatgggctgtaaggtggctggtgcatcccggatcattggtgtggacatcaataaagata 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130462265 tcatgggctgtaaggtggctggtgcatcccggatcattggtgtggacatcaataaagata 130462324
Query: 823 aattcgcaagggccaaggagtttggagcttctgaatgtattaacccccaggatttcagta 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130462325 aattcgcaagggccaaggagtttggagcttctgaatgtattaacccccaggatttcagta 130462384
Query: 883 aacctatccaggaagtgctcattgagatgactgatgggggagtggactattcctttgagt 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130462385 aacctatccaggaagtgctcattgagatgactgatgggggagtggactattcctttgagt 130462444
Query: 943 gtattggtaacgtgaaagtcatg 965
|||||||||||||||||||||||
Sbjct: 130462445 gtattggtaacgtgaaagtcatg 130462467
Score = 464 bits (234), Expect = e-128
Identities = 250/254 (98%), Gaps = 1/254 (0%)
Strand = Plus / Plus
Query: 1239 agcatccgaacagtcataaagctttaaattcaaaaagagaaaaatttgtccctccttgca 1298
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 130466604 agcatccgaacagtcataaagctttaagttcaaaa-gagaaaaatttgtccctccttgca 130466662
Query: 1299 cccaagtcttgtggtctgattggagcagccagacaagcagggaggagctctttcaagttc 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130466663 cccaagtcttgtggtctgattggagcagccagacaagcagggaggagctctttcaagttc 130466722
Query: 1359 acagcttccttagaccttcattaacctactctagggaataacgttttctggataaatcac 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130466723 acagcttccttagaccttcattaacctactctagggaataacgttttctggataaatcac 130466782
Query: 1419 aagtctctaatcaaggacaagactcgtactgtcataagtctgttttctggactcttcttc 1478
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 130466783 aagtctctaatcaaggacaagactcgtactgtcataaatctgttttctggactcttcttc 130466842
Query: 1479 acataaatcgtgct 1492
|||||| |||||||
Sbjct: 130466843 acataagtcgtgct 130466856
Score = 444 bits (224), Expect = e-122
Identities = 224/224 (100%)
Strand = Plus / Plus
Query: 483 agagtcactcaagggaaaggcttaatgccagatggcactagcagatttacttgtaaagga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130461837 agagtcactcaagggaaaggcttaatgccagatggcactagcagatttacttgtaaagga 130461896
Query: 543 aagacaattttacattacatgggaaccagtaccttttctgaatacacagttgtggctgac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130461897 aagacaattttacattacatgggaaccagtaccttttctgaatacacagttgtggctgac 130461956
Query: 603 atctctgttgctaaaattgatcctttggcccctttggataaagtctgccttctgggttgt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130461957 atctctgttgctaaaattgatcctttggcccctttggataaagtctgccttctgggttgt 130462016
Query: 663 ggcgtttcaactggttatggtgcggctgtgaacactgccaaggt 706
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130462017 ggcgtttcaactggttatggtgcggctgtgaacactgccaaggt 130462060
Score = 305 bits (154), Expect = 4e-80
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 cgtcccccgaaaacctctgctccgcactcgccccggcgccggcggaggtagaagagcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130451281 cgtcccccgaaaacctctgctccgcactcgccccggcgccggcggaggtagaagagcgcc 130451340
Query: 61 acgcgcacgctccgcccacatcgccgaccctccccgggccctgccggatgtccgcttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130451341 acgcgcacgctccgcccacatcgccgaccctccccgggccctgccggatgtccgcttctc 130451400
Query: 121 gctgctcgcagtcggaggacatggcgaaccaggt 154
||||||||||||||||||||||||||||||||||
Sbjct: 130451401 gctgctcgcagtcggaggacatggcgaaccaggt 130451434
Score = 289 bits (146), Expect = 2e-75
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 253 agattattgccactgcagtttgccacactgatgcctataccctgagtggggctgatcctg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130457062 agattattgccactgcagtttgccacactgatgcctataccctgagtggggctgatcctg 130457121
Query: 313 aagggagttttccagtgatcctgggacacgaaggtgctggaattgtggaaagtgttggtg 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130457122 aagggagttttccagtgatcctgggacacgaaggtgctggaattgtggaaagtgttggtg 130457181
Query: 373 aaggagttactaagcttaaggcaggt 398
||||||||||||||||||||||||||
Sbjct: 130457182 aaggagttactaagcttaaggcaggt 130457207
Score = 274 bits (138), Expect = 1e-70
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 965 gagagcagcgctggaggcctgccacaaaggctggggtgtcagcgtggtggttggagtagc 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130463210 gagagcagcgctggaggcctgccacaaaggctggggtgtcagcgtggtggttggagtagc 130463269
Query: 1025 tgcttcgggcgaagaaatcgccactcgtccattccagctggtcacaggccgcacatggaa 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130463270 tgcttcgggcgaagaaatcgccactcgtccattccagctggtcacaggccgcacatggaa 130463329
Query: 1085 aggcactgcgtttggagg 1102
||||||||||||||||||
Sbjct: 130463330 aggcactgcgtttggagg 130463347
Score = 238 bits (120), Expect = 7e-60
Identities = 134/141 (95%)
Strand = Plus / Plus
Query: 1100 aggatggaagagtgtagaaagcatcccaaagttggtgtcagaatacatgtccnnnnnnnt 1159
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 130466332 aggatggaagagtgtagaaagcatcccaaagttggtgtcagaatacatgtccaaaaaaat 130466391
Query: 1160 aaaggttgatgaatttgtgactcacaatctgccttttgaccaaataaacgaagcctttga 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130466392 aaaggttgatgaatttgtgactcacaatctgccttttgaccaaataaacgaagcctttga 130466451
Query: 1220 actgatgcatgcagggaaaag 1240
|||||||||||||||||||||
Sbjct: 130466452 actgatgcatgcagggaaaag 130466472
Score = 208 bits (105), Expect = 6e-51
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 150 caggtcatcaagtgcaaggctgcggttgcctgggaggctggaaagcctctctccatagag 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130454182 caggtcatcaagtgcaaggctgcggttgcctgggaggctggaaagcctctctccatagag 130454241
Query: 210 gagatagaggtggcacccccaaaggctcatgaagttcgaattaag 254
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130454242 gagatagaggtggcacccccaaaggctcatgaagttcgaattaag 130454286
Score = 180 bits (91), Expect = 1e-42
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 394 caggtgatactgtcatcccactttacatcccacagtgtggagaatgcaaattttgtctaa 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130458242 caggtgatactgtcatcccactttacatcccacagtgtggagaatgcaaattttgtctaa 130458301
Query: 454 atcctaaaacaaacctttgccagaaaataag 484
|||||||||||||||||||||||||||||||
Sbjct: 130458302 atcctaaaacaaacctttgccagaaaataag 130458332
Score = 71.9 bits (36), Expect = 1e-09
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 759 gttatcatgggctgtaaggtggctggtgcatcccggatcattgg 802
|||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 130177533 gttatcatgggctgtaagttggctggtgcatccaggatcattgg 130177576
Score = 60.0 bits (30), Expect = 4e-06
Identities = 96/118 (81%)
Strand = Plus / Plus
Query: 714 ggctctacttgtgctgtctttggcctgggaggagttggattggcagttatcatgggctgt 773
||||| || ||||| || || ||||| |||||||| || || | ||| |||||||||||
Sbjct: 130236274 ggctccacctgtgccgtgttcggcctcggaggagtcggcctgtctgttgtcatgggctgt 130236333
Query: 774 aaggtggctggtgcatcccggatcattggtgtggacatcaataaagataaattcgcaa 831
|| | ||||| ||| || |||||||||| ||||||||||| ||||| ||||| ||||
Sbjct: 130236334 aaagcagctggagcagccaggatcattggagtggacatcaacaaagacaaatttgcaa 130236391
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,950,030
Number of extensions: 271
Number of successful extensions: 271
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 264
Number of HSP's successfully gapped: 13
Length of query: 1492
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1471
Effective length of database: 2,808,413,156
Effective search space: 4131175752476
Effective search space used: 4131175752476
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)