Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007536
(1654 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029733.2| palmitoyltransferase ZDHHC9 [Bos taurus]. 652 0.0
Alignment gi|NP_001178108.1| probable palmitoyltransferase ZDHHC14 [Bos t... 410 e-114
Alignment gi|XP_595621.3| PREDICTED: zinc finger, DHHC-type containing 14... 410 e-114
Alignment gi|XP_002685806.1| PREDICTED: zinc finger, DHHC-type containing... 372 e-103
Alignment gi|NP_001179692.1| probable palmitoyltransferase ZDHHC5 [Bos ta... 186 5e-47
Alignment gi|XP_002683803.1| PREDICTED: zinc finger, DHHC domain containi... 186 5e-47
Alignment gi|XP_002690409.1| PREDICTED: hypothetical protein [Bos taurus]. 124 2e-28
Alignment gi|NP_001069139.1| probable palmitoyltransferase ZDHHC19 [Bos t... 105 9e-23
Alignment gi|XP_002684846.1| PREDICTED: zinc finger, DHHC-type containing... 105 9e-23
Alignment gi|XP_001787486.1| PREDICTED: zinc finger, DHHC-type containing... 105 9e-23
>ref|NP_001029733.2| palmitoyltransferase ZDHHC9 [Bos taurus].
Length = 363
Score = 652 bits (1681), Expect = 0.0
Identities = 315/333 (94%), Positives = 317/333 (95%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 240
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIV+NCCEVLCGPLPPSVLDRRG
Sbjct: 241 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVENCCEVLCGPLPPSVLDRRG 300
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLS 1321
ILPLEESGSRPPSTQEASTSLLPQ PAP +HLS
Sbjct: 301 ILPLEESGSRPPSTQEASTSLLPQGPAPIDHLS 333
>ref|NP_001178108.1| probable palmitoyltransferase ZDHHC14 [Bos taurus].
Length = 488
Score = 410 bits (1054), Expect = e-114
Identities = 192/316 (60%), Positives = 234/316 (74%), Gaps = 4/316 (1%)
Frame = +2
Query: 341 RKKVT--RKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQL 514
+KK+ RKWE PGRN F C+GR+MMARQ G+FYLTL LIL T LFFAF+C YLAV++
Sbjct: 31 KKKIAARRKWEVFPGRNKFFCNGRIMMARQTGVFYLTLVLILVTSGLFFAFDCPYLAVKI 90
Query: 515 SPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPP 694
+PAIPV +LF F M TLLRTSFSDPGV+PRA PDEAA +E +I+ NG G RPPP
Sbjct: 91 TPAIPVVGGILFFFVMGTLLRTSFSDPGVLPRATPDEAADLERQIDIANGTSSGGYRPPP 150
Query: 695 RIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXX 874
R K IN Q VKLKYC+TCKIFRPPRASHCS+CDNCVERFDHHCPWVGNCVGKRNYR
Sbjct: 151 RTKEVIINGQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFF 210
Query: 875 XXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTG 1054
++FAF I +V L+S + GFL LK++P +VLE ++CFF++WS+VGL+G
Sbjct: 211 YMFILSLSFLTVFIFAFVITHVILRSQQAGFLNALKDSPASVLEAVVCFFSVWSIVGLSG 270
Query: 1055 FHTFLVALNQTTNEDIKGSWTGKNRVQ--NPYSHGNIVKNCCEVLCGPLPPSVLDRRGIL 1228
FHT+L++ NQTTNEDIKGSW+ K + NPYS+GNI NCC LCGP+ PS++DRRG +
Sbjct: 271 FHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGNIFTNCCVALCGPISPSLIDRRGYI 330
Query: 1229 PLEESGSRPPSTQEAS 1276
+ PS A+
Sbjct: 331 QPDTPQPAAPSNGMAT 346
>ref|XP_595621.3| PREDICTED: zinc finger, DHHC-type containing 14 isoform 2 [Bos
taurus].
Length = 473
Score = 410 bits (1054), Expect = e-114
Identities = 192/316 (60%), Positives = 234/316 (74%), Gaps = 4/316 (1%)
Frame = +2
Query: 341 RKKVT--RKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQL 514
+KK+ RKWE PGRN F C+GR+MMARQ G+FYLTL LIL T LFFAF+C YLAV++
Sbjct: 31 KKKIAARRKWEVFPGRNKFFCNGRIMMARQTGVFYLTLVLILVTSGLFFAFDCPYLAVKI 90
Query: 515 SPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPP 694
+PAIPV +LF F M TLLRTSFSDPGV+PRA PDEAA +E +I+ NG G RPPP
Sbjct: 91 TPAIPVVGGILFFFVMGTLLRTSFSDPGVLPRATPDEAADLERQIDIANGTSSGGYRPPP 150
Query: 695 RIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXX 874
R K IN Q VKLKYC+TCKIFRPPRASHCS+CDNCVERFDHHCPWVGNCVGKRNYR
Sbjct: 151 RTKEVIINGQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFF 210
Query: 875 XXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTG 1054
++FAF I +V L+S + GFL LK++P +VLE ++CFF++WS+VGL+G
Sbjct: 211 YMFILSLSFLTVFIFAFVITHVILRSQQAGFLNALKDSPASVLEAVVCFFSVWSIVGLSG 270
Query: 1055 FHTFLVALNQTTNEDIKGSWTGKNRVQ--NPYSHGNIVKNCCEVLCGPLPPSVLDRRGIL 1228
FHT+L++ NQTTNEDIKGSW+ K + NPYS+GNI NCC LCGP+ PS++DRRG +
Sbjct: 271 FHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGNIFTNCCVALCGPISPSLIDRRGYI 330
Query: 1229 PLEESGSRPPSTQEAS 1276
+ PS A+
Sbjct: 331 QPDTPQPAAPSNGMAT 346
>ref|XP_002685806.1| PREDICTED: zinc finger, DHHC-type containing 18-like [Bos taurus].
Length = 430
Score = 372 bits (955), Expect = e-103
Identities = 174/321 (54%), Positives = 225/321 (70%), Gaps = 3/321 (0%)
Frame = +2
Query: 344 KKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQLSPA 523
++ RKWE PGRN F C GR+M+A G+F LTL LIL T LFF F+C +LA L+ A
Sbjct: 79 RRPRRKWEVFPGRNRFYCGGRLMLAGHGGVFALTLLLILTTTVLFFVFDCPFLARHLTLA 138
Query: 524 IPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIK 703
IP+ AA+LF F M+ LL+TSF+DPG++PRA EAA +E +I+ T + RPPPR +
Sbjct: 139 IPIIAAILFFFVMSCLLQTSFTDPGILPRATVCEAAALEKQIDNTGSST---YRPPPRTR 195
Query: 704 NFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXX 883
IN Q+VKLKYC+TCK+FRPPR SHCS+CDNCVERFDHHCPWVGNCVGKRNYR
Sbjct: 196 EVMINGQVVKLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRFFYAF 255
Query: 884 XXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHT 1063
++FA + ++ L+S FL TLKETP +VLE++ICFF++WS++GL+GFHT
Sbjct: 256 ILSLSFLTAFIFACVVTHLTLRSQGSNFLSTLKETPASVLELVICFFSIWSILGLSGFHT 315
Query: 1064 FLVALNQTTNEDIKGSWTGKNRVQ---NPYSHGNIVKNCCEVLCGPLPPSVLDRRGILPL 1234
+LVA N TTNEDIKGSW+ K + NPYSH +++ NCC VLCGPLPPS++DRRG +
Sbjct: 316 YLVASNLTTNEDIKGSWSNKRGGEASVNPYSHKSVITNCCAVLCGPLPPSLIDRRGFVQS 375
Query: 1235 EESGSRPPSTQEASTSLLPQS 1297
+ P + E + P +
Sbjct: 376 DTVLPSPVRSDEPACRAKPDA 396
>ref|NP_001179692.1| probable palmitoyltransferase ZDHHC5 [Bos taurus].
Length = 714
Score = 186 bits (472), Expect = 5e-47
Identities = 104/256 (40%), Positives = 138/256 (53%), Gaps = 2/256 (0%)
Frame = +2
Query: 455 ILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAF 634
++G TLFFAF C L++ +SPA+PV+ A++FLF +A +F DPGV PRA DE
Sbjct: 24 LVGATTLFFAFTCPGLSLSVSPAVPVYNAVVFLFVLANFSMATFMDPGVFPRAEEDEDK- 82
Query: 635 IEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVER 814
E + A P K +I V++K+C TC+ +RPPR SHCS+CDNCVE
Sbjct: 83 -EDDFRA------------PLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEE 129
Query: 815 FDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPG 994
FDHHCPWV NC+G+RNYR VF F ++YV + +E L
Sbjct: 130 FDHHCPWVNNCIGRRNYRYFFLFLLSLTAHITGVFGFGLLYV------LYHMEELSGVRT 183
Query: 995 TVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKN 1168
V ++C L+ V GLTGFH LVA +TTNE + G + G NP+++G N
Sbjct: 184 AVTMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFRGG---VNPFTNG-CCNN 239
Query: 1169 CCEVLCGPLPPSVLDR 1216
VLC P L R
Sbjct: 240 VSRVLCSSPAPRYLGR 255
>ref|XP_002683803.1| PREDICTED: zinc finger, DHHC domain containing 5-like [Bos taurus].
Length = 714
Score = 186 bits (472), Expect = 5e-47
Identities = 104/256 (40%), Positives = 138/256 (53%), Gaps = 2/256 (0%)
Frame = +2
Query: 455 ILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAF 634
++G TLFFAF C L++ +SPA+PV+ A++FLF +A +F DPGV PRA DE
Sbjct: 24 LVGATTLFFAFTCPGLSLSVSPAVPVYNAVVFLFVLANFSMATFMDPGVFPRAEEDEDK- 82
Query: 635 IEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVER 814
E + A P K +I V++K+C TC+ +RPPR SHCS+CDNCVE
Sbjct: 83 -EDDFRA------------PLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEE 129
Query: 815 FDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPG 994
FDHHCPWV NC+G+RNYR VF F ++YV + +E L
Sbjct: 130 FDHHCPWVNNCIGRRNYRYFFLFLLSLTAHITGVFGFGLLYV------LYHMEELSGVRT 183
Query: 995 TVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKN 1168
V ++C L+ V GLTGFH LVA +TTNE + G + G NP+++G N
Sbjct: 184 AVTMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFRGG---VNPFTNG-CCNN 239
Query: 1169 CCEVLCGPLPPSVLDR 1216
VLC P L R
Sbjct: 240 VSRVLCSSPAPRYLGR 255
>ref|XP_002690409.1| PREDICTED: hypothetical protein [Bos taurus].
Length = 368
Score = 124 bits (311), Expect = 2e-28
Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Frame = +2
Query: 986 TPGTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQ--NPYSHGNI 1159
TP TVLE ++CFF++WS+VGL+GFHT+L++ NQTTNEDIKGSW+ K + NPYS+GNI
Sbjct: 128 TPDTVLEAVVCFFSVWSIVGLSGFHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGNI 187
Query: 1160 VKNCCEVLCGPLPPSVLDRRGILPLEESGSRPPSTQEAS 1276
NCC LCGP+ PS++DRRG + + PS A+
Sbjct: 188 FTNCCVALCGPISPSLIDRRGYIQPDTPQPAAPSNGMAT 226
>ref|NP_001069139.1| probable palmitoyltransferase ZDHHC19 [Bos taurus].
Length = 365
Score = 105 bits (263), Expect = 9e-23
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 4/250 (1%)
Frame = +2
Query: 473 LFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIE 652
LFFAF CR+LA A PV +LF+ + +L+ +FSDPG++ +
Sbjct: 44 LFFAFPCRWLAQNGEWAFPVITGLLFILTFFSLISLNFSDPGILHQ-------------- 89
Query: 653 ATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCP 832
G+ QG P + +N++ +L++C C RPPR HC C+ CVE FDHHC
Sbjct: 90 ---GSNEQG---PLMVHVVWVNHRAFRLQWCQKCCFHRPPRTYHCPWCNICVEDFDHHCK 143
Query: 833 WVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVL 1012
WV NC+G RN+R + ++++ +++ + F + + +L
Sbjct: 144 WVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFL-VRTTHLSF------SMDKAIAIL 196
Query: 1013 ICFFTLWSVVGLTGFHTFLVALNQTTN-EDIKGSWTGKNRV---QNPYSHGNIVKNCCEV 1180
+ +V L FL+ L Q + + S+ GK R NP+ HG N
Sbjct: 197 VAVPAAGFLVPL-----FLLLLIQAMSVSAAERSYEGKCRYLQGYNPFDHG-CASNWYLT 250
Query: 1181 LCGPLPPSVL 1210
+C PL P +
Sbjct: 251 ICAPLGPKYM 260
>ref|XP_002684846.1| PREDICTED: zinc finger, DHHC-type containing 19 [Bos taurus].
Length = 365
Score = 105 bits (263), Expect = 9e-23
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 4/250 (1%)
Frame = +2
Query: 473 LFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIE 652
LFFAF CR+LA A PV +LF+ + +L+ +FSDPG++ +
Sbjct: 44 LFFAFPCRWLAQNGEWAFPVITGLLFILTFFSLISLNFSDPGILHQ-------------- 89
Query: 653 ATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCP 832
G+ QG P + +N++ +L++C C RPPR HC C+ CVE FDHHC
Sbjct: 90 ---GSNEQG---PLMVHVVWVNHRAFRLQWCQKCCFHRPPRTYHCPWCNICVEDFDHHCK 143
Query: 833 WVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVL 1012
WV NC+G RN+R + ++++ +++ + F + + +L
Sbjct: 144 WVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFL-VRTTHLSF------SMDKAIAIL 196
Query: 1013 ICFFTLWSVVGLTGFHTFLVALNQTTN-EDIKGSWTGKNRV---QNPYSHGNIVKNCCEV 1180
+ +V L FL+ L Q + + S+ GK R NP+ HG N
Sbjct: 197 VAVPAAGFLVPL-----FLLLLIQAMSVSAAERSYEGKCRYLQGYNPFDHG-CASNWYLT 250
Query: 1181 LCGPLPPSVL 1210
+C PL P +
Sbjct: 251 ICAPLGPKYM 260
>ref|XP_001787486.1| PREDICTED: zinc finger, DHHC-type containing 19 [Bos taurus].
Length = 365
Score = 105 bits (263), Expect = 9e-23
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 4/250 (1%)
Frame = +2
Query: 473 LFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIE 652
LFFAF CR+LA A PV +LF+ + +L+ +FSDPG++ +
Sbjct: 44 LFFAFPCRWLAQNGEWAFPVITGLLFILTFFSLISLNFSDPGILHQ-------------- 89
Query: 653 ATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCP 832
G+ QG P + +N++ +L++C C RPPR HC C+ CVE FDHHC
Sbjct: 90 ---GSNEQG---PLMVHVVWVNHRAFRLQWCQKCCFHRPPRTYHCPWCNICVEDFDHHCK 143
Query: 833 WVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVL 1012
WV NC+G RN+R + ++++ +++ + F + + +L
Sbjct: 144 WVNNCIGHRNFRFFMLLVLSLCLYSGAMLVTCLIFL-VRTTHLSF------SMDKAIAIL 196
Query: 1013 ICFFTLWSVVGLTGFHTFLVALNQTTN-EDIKGSWTGKNRV---QNPYSHGNIVKNCCEV 1180
+ +V L FL+ L Q + + S+ GK R NP+ HG N
Sbjct: 197 VAVPAAGFLVPL-----FLLLLIQAMSVSAAERSYEGKCRYLQGYNPFDHG-CASNWYLT 250
Query: 1181 LCGPLPPSVL 1210
+C PL P +
Sbjct: 251 ICAPLGPKYM 260
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 64,030,586
Number of extensions: 1858803
Number of successful extensions: 7890
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 7829
Number of HSP's successfully gapped: 37
Length of query: 551
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 444
Effective length of database: 14,140,958
Effective search space: 6278585352
Effective search space used: 6278585352
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007536
(1654 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_852439.1| PREDICTED: similar to Zinc finger DHHC domain c... 655 0.0
Alignment gi|XP_865704.1| PREDICTED: similar to Zinc finger DHHC domain c... 624 e-179
Alignment gi|XP_865688.1| PREDICTED: similar to Zinc finger DHHC domain c... 611 e-175
Alignment gi|XP_865638.1| PREDICTED: similar to Zinc finger DHHC domain c... 611 e-175
Alignment gi|XP_549247.2| PREDICTED: similar to Zinc finger DHHC domain c... 569 e-162
Alignment gi|XP_865624.1| PREDICTED: similar to Zinc finger DHHC domain c... 566 e-161
Alignment gi|XP_865655.1| PREDICTED: similar to Zinc finger DHHC domain c... 526 e-149
Alignment gi|XP_854971.1| PREDICTED: similar to NEW1 domain containing pr... 343 3e-94
Alignment gi|XP_854957.1| PREDICTED: similar to Zinc finger DHHC domain c... 322 7e-88
Alignment gi|NP_001104240.1| probable palmitoyltransferase ZDHHC8 [Canis ... 187 3e-47
>ref|XP_852439.1| PREDICTED: similar to Zinc finger DHHC domain containing protein 9
(Zinc finger protein 379) isoform 2 [Canis familiaris].
Length = 364
Score = 655 bits (1690), Expect = 0.0
Identities = 317/333 (95%), Positives = 318/333 (95%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 240
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 241 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 300
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLS 1321
ILPLEESGSRPPSTQE S+SLLPQSPAPTEHLS
Sbjct: 301 ILPLEESGSRPPSTQETSSSLLPQSPAPTEHLS 333
>ref|XP_865704.1| PREDICTED: similar to Zinc finger DHHC domain containing protein 9
(Zinc finger protein 379) isoform 7 [Canis familiaris].
Length = 361
Score = 624 bits (1610), Expect = e-179
Identities = 306/333 (91%), Positives = 307/333 (92%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEI
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEI---GDEFLSTY 117
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 118 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 177
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 178 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 237
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 238 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 297
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLS 1321
ILPLEESGSRPPSTQE S+SLLPQSPAPTEHLS
Sbjct: 298 ILPLEESGSRPPSTQETSSSLLPQSPAPTEHLS 330
>ref|XP_865688.1| PREDICTED: similar to Zinc finger DHHC domain containing protein 9
(Zinc finger protein 379) isoform 6 [Canis familiaris].
Length = 381
Score = 611 bits (1575), Expect = e-175
Identities = 302/350 (86%), Positives = 307/350 (87%), Gaps = 17/350 (4%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLET-------LKETPG--------- 994
YR YVFAFNIVYVAL S ++ + + P
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALISSRLSLCSSPTISFFRCQRVPNPLPFIYPAS 240
Query: 995 -TVLEVLICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNC 1171
VLEVLICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNC
Sbjct: 241 LDVLEVLICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNC 300
Query: 1172 CEVLCGPLPPSVLDRRGILPLEESGSRPPSTQEASTSLLPQSPAPTEHLS 1321
CEVLCGPLPPSVLDRRGILPLEESGSRPPSTQE S+SLLPQSPAPTEHLS
Sbjct: 301 CEVLCGPLPPSVLDRRGILPLEESGSRPPSTQETSSSLLPQSPAPTEHLS 350
>ref|XP_865638.1| PREDICTED: similar to Zinc finger DHHC domain containing protein 9
(Zinc finger protein 379) isoform 4 [Canis familiaris].
Length = 365
Score = 611 bits (1575), Expect = e-175
Identities = 298/334 (89%), Positives = 303/334 (90%), Gaps = 1/334 (0%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVY-VALKSLKIGFLETLKETPGTVLEVLICFFTLWSV 1039
YR YVFAFNIVY + + + + TVLEVLICFFTLWSV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYLLVMTKQESSTFHISSKFRRTVLEVLICFFTLWSV 240
Query: 1040 VGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRR 1219
VGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRR
Sbjct: 241 VGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRR 300
Query: 1220 GILPLEESGSRPPSTQEASTSLLPQSPAPTEHLS 1321
GILPLEESGSRPPSTQE S+SLLPQSPAPTEHLS
Sbjct: 301 GILPLEESGSRPPSTQETSSSLLPQSPAPTEHLS 334
>ref|XP_549247.2| PREDICTED: similar to Zinc finger DHHC domain containing protein 9
(Zinc finger protein 379) isoform 1 [Canis familiaris].
Length = 335
Score = 569 bits (1467), Expect = e-162
Identities = 283/333 (84%), Positives = 285/333 (85%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGT +
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTYPPLA---------- 230
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
IKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 231 -------------------IKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 271
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLS 1321
ILPLEESGSRPPSTQE S+SLLPQSPAPTEHLS
Sbjct: 272 ILPLEESGSRPPSTQETSSSLLPQSPAPTEHLS 304
>ref|XP_865624.1| PREDICTED: similar to Zinc finger DHHC domain containing protein 9
(Zinc finger protein 379) isoform 3 [Canis familiaris].
Length = 318
Score = 566 bits (1459), Expect = e-161
Identities = 285/333 (85%), Positives = 286/333 (85%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVE
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVE----------------- 163
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
SLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 164 -----------------------------SLKIGFLETLKETPGTVLEVLICFFTLWSVV 194
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 195 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 254
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLS 1321
ILPLEESGSRPPSTQE S+SLLPQSPAPTEHLS
Sbjct: 255 ILPLEESGSRPPSTQETSSSLLPQSPAPTEHLS 287
>ref|XP_865655.1| PREDICTED: similar to Zinc finger DHHC domain containing protein 9
(Zinc finger protein 379) isoform 5 [Canis familiaris].
Length = 311
Score = 526 bits (1355), Expect = e-149
Identities = 264/333 (79%), Positives = 265/333 (79%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYV---------------------------------- 206
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
IKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 207 -------------------IKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 247
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLS 1321
ILPLEESGSRPPSTQE S+SLLPQSPAPTEHLS
Sbjct: 248 ILPLEESGSRPPSTQETSSSLLPQSPAPTEHLS 280
>ref|XP_854971.1| PREDICTED: similar to NEW1 domain containing protein isoform 1 [Canis
familiaris].
Length = 420
Score = 343 bits (880), Expect = 3e-94
Identities = 157/259 (60%), Positives = 192/259 (74%), Gaps = 2/259 (0%)
Frame = +2
Query: 491 CRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAV 670
C YLAV+++PAIPV +LF F M TLLRTSFSDPGV+PRA PDEAA +E +I+ NG
Sbjct: 15 CPYLAVKITPAIPVVGGILFFFVMGTLLRTSFSDPGVLPRATPDEAADLERQIDIANGTS 74
Query: 671 PQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCV 850
G RPPPR K IN Q VKLKYC+TCKIFRPPRASHCS+CDNCVERFDHHCPWVGNCV
Sbjct: 75 SGGYRPPPRTKEVIINGQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCV 134
Query: 851 GKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTL 1030
GKRNYR ++FAF I +V L+S + GFL LK++P +VLE ++CFF++
Sbjct: 135 GKRNYRFFYMFILSLSFLTVFIFAFVITHVILRSQQTGFLNALKDSPASVLEAVVCFFSV 194
Query: 1031 WSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQ--NPYSHGNIVKNCCEVLCGPLPPS 1204
WS+VGL+GFHT+L++ NQTTNEDIKGSW+ K + NPYS+GNI NCC LCGP+ PS
Sbjct: 195 WSIVGLSGFHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGNIFTNCCVALCGPISPS 254
Query: 1205 VLDRRGILPLEESGSRPPS 1261
++DRRG + + PS
Sbjct: 255 LIDRRGYIQPDTPQPATPS 273
>ref|XP_854957.1| PREDICTED: similar to Zinc finger DHHC domain containing protein 18
[Canis familiaris].
Length = 293
Score = 322 bits (825), Expect = 7e-88
Identities = 148/272 (54%), Positives = 192/272 (70%), Gaps = 3/272 (1%)
Frame = +2
Query: 491 CRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAV 670
C +LA QL+ AIP+ AA+LF F M+ LL+TSF+DPG++PRA EAA +E +IE N
Sbjct: 7 CPFLARQLTLAIPIIAAILFFFVMSCLLQTSFTDPGILPRATVCEAAALEKQIEVENNTG 66
Query: 671 PQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCV 850
RPPPR + IN Q+VKLKYC+TCK+FRPPR SHCS+CDNCVERFDHHCPWVGNCV
Sbjct: 67 SSTYRPPPRTREVMINGQMVKLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCV 126
Query: 851 GKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTL 1030
G+RNYR ++FA + ++ L+S FL TLKETP +VLE++ICFF++
Sbjct: 127 GRRNYRFFYAFILSLSFLTAFIFACVVTHLTLRSQGSNFLSTLKETPASVLELVICFFSI 186
Query: 1031 WSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQ---NPYSHGNIVKNCCEVLCGPLPP 1201
WS++GL+GFHT+LVA N TTNEDIKGSW+ K + NPYSH +++ NCC VLCGPLPP
Sbjct: 187 WSILGLSGFHTYLVASNLTTNEDIKGSWSSKRGGEASVNPYSHKSVITNCCAVLCGPLPP 246
Query: 1202 SVLDRRGILPLEESGSRPPSTQEASTSLLPQS 1297
S++DRRG + + P + E + P +
Sbjct: 247 SLIDRRGFVQADTVLPSPIRSDEPACGAKPDA 278
>ref|NP_001104240.1| probable palmitoyltransferase ZDHHC8 [Canis lupus familiaris].
Length = 765
Score = 187 bits (474), Expect = 3e-47
Identities = 106/263 (40%), Positives = 140/263 (53%), Gaps = 2/263 (0%)
Frame = +2
Query: 452 LILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAA 631
L++G+ TLFF F C +L +SPA+PV+ ++FLF +A +F DPGV PRA DE
Sbjct: 23 LLVGSSTLFFVFTCPWLTRAVSPAVPVYNGIIFLFVLANFSMATFMDPGVFPRADEDEDK 82
Query: 632 FIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVE 811
E + A P KN + V++K+C TC +RPPR SHCS+CDNCVE
Sbjct: 83 --EDDFRA------------PLYKNVDVRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVE 128
Query: 812 RFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETP 991
FDHHCPWV NC+G+RNYR V AF +VYV + +G T
Sbjct: 129 DFDHHCPWVNNCIGRRNYRYFFLFLLSLSAHMVGVVAFGLVYVLNHAEGLGAAHT----- 183
Query: 992 GTVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVK 1165
T+ ++C L+ V+GLTGFH LV +TTNE + G + G NP++ G
Sbjct: 184 -TITMAVMCVAGLFFIPVIGLTGFHVVLVTRGRTTNEHVTGKFRGG---VNPFTRG-CYG 238
Query: 1166 NCCEVLCGPLPPSVLDRRGILPL 1234
N VLC PL P + LPL
Sbjct: 239 NVEHVLCSPLAPRYVVEPPRLPL 261
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 66,836,743
Number of extensions: 1923180
Number of successful extensions: 8191
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 8095
Number of HSP's successfully gapped: 41
Length of query: 551
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 443
Effective length of database: 15,274,216
Effective search space: 6766477688
Effective search space used: 6766477688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007536
(1654 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_057116.2| palmitoyltransferase ZDHHC9 [Homo sapiens]. 657 0.0
Alignment gi|NP_001008223.1| palmitoyltransferase ZDHHC9 [Homo sapiens]. 657 0.0
Alignment gi|NP_714968.1| probable palmitoyltransferase ZDHHC14 isoform 2... 410 e-114
Alignment gi|NP_078906.2| probable palmitoyltransferase ZDHHC14 isoform 1... 410 e-114
Alignment gi|NP_115659.1| palmitoyltransferase ZDHHC18 [Homo sapiens]. 369 e-102
Alignment gi|NP_001171953.1| probable palmitoyltransferase ZDHHC8 isoform... 189 7e-48
Alignment gi|NP_037505.1| probable palmitoyltransferase ZDHHC8 isoform 2 ... 189 7e-48
Alignment gi|NP_056272.2| probable palmitoyltransferase ZDHHC5 [Homo sapi... 185 9e-47
Alignment gi|NP_001034706.1| probable palmitoyltransferase ZDHHC19 [Homo ... 101 2e-21
Alignment gi|NP_057437.1| palmitoyltransferase ZDHHC2 [Homo sapiens]. 83 9e-16
>ref|NP_057116.2| palmitoyltransferase ZDHHC9 [Homo sapiens].
Length = 364
Score = 657 bits (1694), Expect = 0.0
Identities = 317/335 (94%), Positives = 320/335 (95%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 240
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 241 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 300
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN 1327
ILPLEESGSRPPSTQE S+SLLPQSPAPTEHL++N
Sbjct: 301 ILPLEESGSRPPSTQETSSSLLPQSPAPTEHLNSN 335
>ref|NP_001008223.1| palmitoyltransferase ZDHHC9 [Homo sapiens].
Length = 364
Score = 657 bits (1694), Expect = 0.0
Identities = 317/335 (94%), Positives = 320/335 (95%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 240
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 241 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 300
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN 1327
ILPLEESGSRPPSTQE S+SLLPQSPAPTEHL++N
Sbjct: 301 ILPLEESGSRPPSTQETSSSLLPQSPAPTEHLNSN 335
>ref|NP_714968.1| probable palmitoyltransferase ZDHHC14 isoform 2 [Homo sapiens].
Length = 473
Score = 410 bits (1054), Expect = e-114
Identities = 197/340 (57%), Positives = 240/340 (70%), Gaps = 17/340 (5%)
Frame = +2
Query: 341 RKKVT--RKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQL 514
+KK+ RKWE PGRN F C+GR+MMARQ G+FYLTL LIL T LFFAF+C YLAV++
Sbjct: 31 KKKIAARRKWEVFPGRNKFFCNGRIMMARQTGVFYLTLVLILVTSGLFFAFDCPYLAVKI 90
Query: 515 SPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPP 694
+PAIP A +LF F M TLLRTSFSDPGV+PRA PDEAA +E +I+ NG G RPPP
Sbjct: 91 TPAIPAVAGILFFFVMGTLLRTSFSDPGVLPRATPDEAADLERQIDIANGTSSGGYRPPP 150
Query: 695 RIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXX 874
R K IN Q VKLKYC+TCKIFRPPRASHCS+CDNCVERFDHHCPWVGNCVGKRNYR
Sbjct: 151 RTKEVIINGQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFF 210
Query: 875 XXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTG 1054
++FAF I +V L+S + GFL LK++P +VLE ++CFF++WS+VGL+G
Sbjct: 211 YMFILSLSFLTVFIFAFVITHVILRSQQTGFLNALKDSPASVLEAVVCFFSVWSIVGLSG 270
Query: 1055 FHTFLVALNQTTNEDIKGSWTGKNRVQ--NPYSHGNIVKNCCEVLCGPLPPSVLDRRGIL 1228
FHT+L++ NQTTNEDIKGSW+ K + NPYS+GNI NCC LCGP+ PS++DRRG +
Sbjct: 271 FHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGNIFTNCCVALCGPISPSLIDRRGYI 330
Query: 1229 PLEESGSRPPST-------------QEASTSLLPQSPAPT 1309
+ PS A+T LL P+ T
Sbjct: 331 QPDTPQPAAPSNGITMYGATQSQSDMAAATPLLQSEPSLT 370
>ref|NP_078906.2| probable palmitoyltransferase ZDHHC14 isoform 1 [Homo sapiens].
Length = 488
Score = 410 bits (1053), Expect = e-114
Identities = 191/311 (61%), Positives = 232/311 (74%), Gaps = 4/311 (1%)
Frame = +2
Query: 341 RKKVT--RKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQL 514
+KK+ RKWE PGRN F C+GR+MMARQ G+FYLTL LIL T LFFAF+C YLAV++
Sbjct: 31 KKKIAARRKWEVFPGRNKFFCNGRIMMARQTGVFYLTLVLILVTSGLFFAFDCPYLAVKI 90
Query: 515 SPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPP 694
+PAIP A +LF F M TLLRTSFSDPGV+PRA PDEAA +E +I+ NG G RPPP
Sbjct: 91 TPAIPAVAGILFFFVMGTLLRTSFSDPGVLPRATPDEAADLERQIDIANGTSSGGYRPPP 150
Query: 695 RIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXX 874
R K IN Q VKLKYC+TCKIFRPPRASHCS+CDNCVERFDHHCPWVGNCVGKRNYR
Sbjct: 151 RTKEVIINGQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFF 210
Query: 875 XXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTG 1054
++FAF I +V L+S + GFL LK++P +VLE ++CFF++WS+VGL+G
Sbjct: 211 YMFILSLSFLTVFIFAFVITHVILRSQQTGFLNALKDSPASVLEAVVCFFSVWSIVGLSG 270
Query: 1055 FHTFLVALNQTTNEDIKGSWTGKNRVQ--NPYSHGNIVKNCCEVLCGPLPPSVLDRRGIL 1228
FHT+L++ NQTTNEDIKGSW+ K + NPYS+GNI NCC LCGP+ PS++DRRG +
Sbjct: 271 FHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGNIFTNCCVALCGPISPSLIDRRGYI 330
Query: 1229 PLEESGSRPPS 1261
+ PS
Sbjct: 331 QPDTPQPAAPS 341
>ref|NP_115659.1| palmitoyltransferase ZDHHC18 [Homo sapiens].
Length = 388
Score = 369 bits (948), Expect = e-102
Identities = 174/321 (54%), Positives = 226/321 (70%), Gaps = 3/321 (0%)
Frame = +2
Query: 344 KKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQLSPA 523
++ RKWE PGRN F C GR+M+A G+F LTL LIL T LFF F+C YLA +L+ A
Sbjct: 64 RRPRRKWEVFPGRNRFYCGGRLMLAGHGGVFALTLLLILTTTGLFFVFDCPYLARKLTLA 123
Query: 524 IPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIK 703
IP+ AA+LF F M+ LL+TSF+DPG++PRA EAA +E +I+ T + RPPPR +
Sbjct: 124 IPIIAAILFFFVMSCLLQTSFTDPGILPRATVCEAAALEKQIDNTGSST---YRPPPRTR 180
Query: 704 NFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXX 883
IN Q+VKLKYC+TCK+FRPPR SHCS+CDNCVERFDHHCPWVGNCVG+RNYR
Sbjct: 181 EVLINGQMVKLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAF 240
Query: 884 XXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHT 1063
++FA + ++ L++ FL TLKETP +VLE++ICFF++WS++GL+GFHT
Sbjct: 241 ILSLSFLTAFIFACVVTHLTLRAQGSNFLSTLKETPASVLELVICFFSIWSILGLSGFHT 300
Query: 1064 FLVALNQTTNEDIKGSWTGKNRVQ---NPYSHGNIVKNCCEVLCGPLPPSVLDRRGILPL 1234
+LVA N TTNEDIKGSW+ K + NPYSH +I+ NCC VLCGPLPPS++DRRG +
Sbjct: 301 YLVASNLTTNEDIKGSWSSKRGGEASVNPYSHKSIITNCCAVLCGPLPPSLIDRRGFVQS 360
Query: 1235 EESGSRPPSTQEASTSLLPQS 1297
+ P + E + P +
Sbjct: 361 DTVLPSPIRSDEPACRAKPDA 381
>ref|NP_001171953.1| probable palmitoyltransferase ZDHHC8 isoform 1 [Homo sapiens].
Length = 778
Score = 189 bits (480), Expect = 7e-48
Identities = 110/275 (40%), Positives = 145/275 (52%), Gaps = 6/275 (2%)
Frame = +2
Query: 452 LILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAA 631
L++G+ TLFF F C +L +SPA+PV+ ++FLF +A +F DPGV PRA DE
Sbjct: 23 LLVGSSTLFFVFTCPWLTRAVSPAVPVYNGIIFLFVLANFSMATFMDPGVFPRADEDEDK 82
Query: 632 FIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVE 811
E + A P KN + V++K+C TC +RPPR SHCS+CDNCVE
Sbjct: 83 --EDDFRA------------PLYKNVDVRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVE 128
Query: 812 RFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETP 991
FDHHCPWV NC+G+RNYR V AF +VYV + +G T
Sbjct: 129 DFDHHCPWVNNCIGRRNYRYFFLFLLSLSAHMVGVVAFGLVYVLNHAEGLGAAHT----- 183
Query: 992 GTVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVK 1165
T+ ++C L+ V+GLTGFH LV +TTNE + G + G NP++ G
Sbjct: 184 -TITMAVMCVAGLFFIPVIGLTGFHVVLVTRGRTTNEQVTGKFRGG---VNPFTRG---- 235
Query: 1166 NCC----EVLCGPLPPSVLDRRGILPLEESGSRPP 1258
CC VLC PL P + LPL S +PP
Sbjct: 236 -CCGNVEHVLCSPLAPRYVVEPPRLPLAVS-LKPP 268
>ref|NP_037505.1| probable palmitoyltransferase ZDHHC8 isoform 2 [Homo sapiens].
Length = 765
Score = 189 bits (480), Expect = 7e-48
Identities = 110/275 (40%), Positives = 145/275 (52%), Gaps = 6/275 (2%)
Frame = +2
Query: 452 LILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAA 631
L++G+ TLFF F C +L +SPA+PV+ ++FLF +A +F DPGV PRA DE
Sbjct: 23 LLVGSSTLFFVFTCPWLTRAVSPAVPVYNGIIFLFVLANFSMATFMDPGVFPRADEDEDK 82
Query: 632 FIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVE 811
E + A P KN + V++K+C TC +RPPR SHCS+CDNCVE
Sbjct: 83 --EDDFRA------------PLYKNVDVRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVE 128
Query: 812 RFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETP 991
FDHHCPWV NC+G+RNYR V AF +VYV + +G T
Sbjct: 129 DFDHHCPWVNNCIGRRNYRYFFLFLLSLSAHMVGVVAFGLVYVLNHAEGLGAAHT----- 183
Query: 992 GTVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVK 1165
T+ ++C L+ V+GLTGFH LV +TTNE + G + G NP++ G
Sbjct: 184 -TITMAVMCVAGLFFIPVIGLTGFHVVLVTRGRTTNEQVTGKFRGG---VNPFTRG---- 235
Query: 1166 NCC----EVLCGPLPPSVLDRRGILPLEESGSRPP 1258
CC VLC PL P + LPL S +PP
Sbjct: 236 -CCGNVEHVLCSPLAPRYVVEPPRLPLAVS-LKPP 268
>ref|NP_056272.2| probable palmitoyltransferase ZDHHC5 [Homo sapiens].
Length = 715
Score = 185 bits (470), Expect = 9e-47
Identities = 102/256 (39%), Positives = 138/256 (53%), Gaps = 2/256 (0%)
Frame = +2
Query: 455 ILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAF 634
++G TLFFAF C L++ +SPA+P++ A++FLF +A +F DPG+ PRA DE
Sbjct: 24 LVGATTLFFAFTCPGLSLYVSPAVPIYNAIMFLFVLANFSMATFMDPGIFPRAEEDEDK- 82
Query: 635 IEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVER 814
E + A P K +I V++K+C TC+ +RPPR SHCS+CDNCVE
Sbjct: 83 -EDDFRA------------PLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEE 129
Query: 815 FDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPG 994
FDHHCPWV NC+G+RNYR VF F ++YV + +E L
Sbjct: 130 FDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYV------LYHIEELSGVRT 183
Query: 995 TVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKN 1168
V ++C L+ V GLTGFH LVA +TTNE + G + G NP+++G N
Sbjct: 184 AVTMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFRGG---VNPFTNG-CCNN 239
Query: 1169 CCEVLCGPLPPSVLDR 1216
VLC P L R
Sbjct: 240 VSRVLCSSPAPRYLGR 255
>ref|NP_001034706.1| probable palmitoyltransferase ZDHHC19 [Homo sapiens].
Length = 309
Score = 101 bits (251), Expect = 2e-21
Identities = 51/132 (38%), Positives = 70/132 (53%)
Frame = +2
Query: 473 LFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIE 652
LFFAF CR+LA A PV LF+ + +L+ +FSDPG++ +
Sbjct: 44 LFFAFPCRWLAQNGEWAFPVITGSLFVLTFFSLVSLNFSDPGILHQ-------------- 89
Query: 653 ATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCP 832
G+ QG P + +N+ +L++C C RPPR HC C+ CVE FDHHC
Sbjct: 90 ---GSAEQG---PLTVHVVWVNHGAFRLQWCPKCCFHRPPRTYHCPWCNICVEDFDHHCK 143
Query: 833 WVGNCVGKRNYR 868
WV NC+G RN+R
Sbjct: 144 WVNNCIGHRNFR 155
>ref|NP_057437.1| palmitoyltransferase ZDHHC2 [Homo sapiens].
Length = 367
Score = 82.8 bits (203), Expect = 9e-16
Identities = 43/140 (30%), Positives = 70/140 (50%)
Frame = +2
Query: 734 LKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXY 913
++YC C++ +P R HCS+CD C+ + DHHCPWV NCVG NY+ +
Sbjct: 126 IRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLF 185
Query: 914 VFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTN 1093
+ A ++ Y +K G +T + L F++ S+ L G+H +LV+ N++T
Sbjct: 186 IAATDLQYF-IKFWTNGLPDTQAKFHIMFLFFAAAMFSV-SLSSLFGYHCWLVSKNKSTL 243
Query: 1094 EDIKGSWTGKNRVQNPYSHG 1153
E + +N +S G
Sbjct: 244 EAFRSPVFRHGTDKNGFSLG 263
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 65,445,624
Number of extensions: 1871404
Number of successful extensions: 7376
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 7301
Number of HSP's successfully gapped: 37
Length of query: 551
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 443
Effective length of database: 14,737,052
Effective search space: 6528514036
Effective search space used: 6528514036
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007536
(1654 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_766053.1| palmitoyltransferase ZDHHC9 [Mus musculus]. 653 0.0
Alignment gi|NP_666185.3| probable palmitoyltransferase ZDHHC14 [Mus musc... 406 e-113
Alignment gi|NP_001017968.2| palmitoyltransferase ZDHHC18 [Mus musculus]. 366 e-101
Alignment gi|NP_742163.4| probable palmitoyltransferase ZDHHC8 [Mus muscu... 189 6e-48
Alignment gi|NP_659136.1| probable palmitoyltransferase ZDHHC5 [Mus muscu... 186 6e-47
Alignment gi|NP_955013.1| probable palmitoyltransferase ZDHHC19 [Mus musc... 101 2e-21
Alignment gi|NP_083768.4| probable palmitoyltransferase ZDHHC20 [Mus musc... 86 7e-17
Alignment gi|NP_001032851.1| probable palmitoyltransferase ZDHHC12 isofor... 84 4e-16
Alignment gi|NP_079704.2| probable palmitoyltransferase ZDHHC12 isoform a... 84 4e-16
Alignment gi|NP_848482.1| palmitoyltransferase ZDHHC2 [Mus musculus]. 82 2e-15
>ref|NP_766053.1| palmitoyltransferase ZDHHC9 [Mus musculus].
Length = 364
Score = 653 bits (1684), Expect = 0.0
Identities = 315/335 (94%), Positives = 319/335 (95%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 240
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 241 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 300
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN 1327
ILPLEESGSRPPSTQE S+SLLPQSPA TEH+++N
Sbjct: 301 ILPLEESGSRPPSTQETSSSLLPQSPASTEHMNSN 335
>ref|NP_666185.3| probable palmitoyltransferase ZDHHC14 [Mus musculus].
Length = 489
Score = 406 bits (1044), Expect = e-113
Identities = 189/311 (60%), Positives = 232/311 (74%), Gaps = 4/311 (1%)
Frame = +2
Query: 341 RKKVT--RKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQL 514
+KK+ RKWE PGRN F C+GR+MMARQ G+FYLTL LIL T LFFAF+CRYLA ++
Sbjct: 31 KKKIAARRKWEVFPGRNKFFCNGRIMMARQTGVFYLTLILILVTSGLFFAFDCRYLAEKI 90
Query: 515 SPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPP 694
+PAIPV +LF F M TLLRTSFSDPGV+PRA PDEAA +E +I+ NG G RPPP
Sbjct: 91 TPAIPVVGGILFFFVMGTLLRTSFSDPGVLPRATPDEAADLERQIDIANGTSSGGYRPPP 150
Query: 695 RIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXX 874
R K IN Q VKLKYC+TCKIFRPPRASHCS+CDNCVE+FDHHCPWVGNCVGKRNYR
Sbjct: 151 RTKEVVINGQTVKLKYCFTCKIFRPPRASHCSLCDNCVEQFDHHCPWVGNCVGKRNYRFF 210
Query: 875 XXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTG 1054
++FAF I +V +S + GFL+ LK++P +VLE +ICFF++WS++GL+G
Sbjct: 211 YMFILSLSFLTVFIFAFVITHVIHRSQQKGFLDALKDSPASVLEAVICFFSVWSIIGLSG 270
Query: 1055 FHTFLVALNQTTNEDIKGSWTGKNRVQ--NPYSHGNIVKNCCEVLCGPLPPSVLDRRGIL 1228
FHT+L++ NQTTNEDIKGSW+ K + NPYS+GNI NCC LCGP+ PS++DRRG +
Sbjct: 271 FHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGNIFTNCCVALCGPISPSLIDRRGYV 330
Query: 1229 PLEESGSRPPS 1261
+ PS
Sbjct: 331 QPDTPQPAAPS 341
>ref|NP_001017968.2| palmitoyltransferase ZDHHC18 [Mus musculus].
Length = 380
Score = 366 bits (939), Expect = e-101
Identities = 172/321 (53%), Positives = 223/321 (69%), Gaps = 3/321 (0%)
Frame = +2
Query: 344 KKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQLSPA 523
++ RKWE PGRN F C GR+M+A G+F LTL LIL T LFF F+C YLA L+ A
Sbjct: 56 RRPRRKWEVFPGRNRFYCGGRLMLAGHGGVFALTLLLILSTTILFFVFDCPYLARTLTLA 115
Query: 524 IPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIK 703
IP+ AA+LF F M+ LL+TSF+DPG++PRA EAA +E +I+ T + RPPPR +
Sbjct: 116 IPIIAAILFFFVMSCLLQTSFTDPGILPRATICEAAALEKQIDNTGSST---YRPPPRTR 172
Query: 704 NFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXX 883
IN Q VKLKYC+TCK+FRPPR SHCS+CDNCVERFDHHCPWVGNCVG+RNYR
Sbjct: 173 EVMINGQTVKLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAF 232
Query: 884 XXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHT 1063
++FA + ++ L S FL LK+TP +VLE++ICFF++WS++GL+GFHT
Sbjct: 233 ILSLSFLTAFIFACVVTHLTLLSQGSNFLSALKKTPASVLELVICFFSIWSILGLSGFHT 292
Query: 1064 FLVALNQTTNEDIKGSWTGKNRVQ---NPYSHGNIVKNCCEVLCGPLPPSVLDRRGILPL 1234
+LVA N TTNEDIKGSW+ K + NPYSH +I+ NCC VLCGPLPPS++DRRG +
Sbjct: 293 YLVASNLTTNEDIKGSWSSKRGGEASVNPYSHKSIITNCCAVLCGPLPPSLIDRRGFVQS 352
Query: 1235 EESGSRPPSTQEASTSLLPQS 1297
+ + P + + + P +
Sbjct: 353 DTALPSPIRSDDPACGAKPDA 373
>ref|NP_742163.4| probable palmitoyltransferase ZDHHC8 [Mus musculus].
Length = 762
Score = 189 bits (480), Expect = 6e-48
Identities = 110/271 (40%), Positives = 144/271 (53%), Gaps = 2/271 (0%)
Frame = +2
Query: 452 LILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAA 631
L++G+ TLFF F C +L +SPAIPV+ +LFLF +A +F DPGV PRA DE
Sbjct: 23 LLVGSSTLFFVFTCPWLTRAVSPAIPVYNGILFLFVLANFSMATFMDPGVFPRADEDEDK 82
Query: 632 FIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVE 811
E + A P KN + V++K+C TC +RPPR SHCS+CDNCVE
Sbjct: 83 --EDDFRA------------PLYKNVDVRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVE 128
Query: 812 RFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETP 991
FDHHCPWV NC+G+RNYR V AF ++YV S +G T
Sbjct: 129 DFDHHCPWVNNCIGRRNYRYFFLFLLSLSAHMVGVVAFGLLYVLNHSEGLGAAHT----- 183
Query: 992 GTVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVK 1165
T+ ++C L+ V+GLTGFH LV +TTNE + G + G NP++ G
Sbjct: 184 -TITMAVMCVAGLFFIPVIGLTGFHVVLVTRGRTTNEQVTGKFRGG---VNPFTRG-CYG 238
Query: 1166 NCCEVLCGPLPPSVLDRRGILPLEESGSRPP 1258
N VLC PL P + +PL S +PP
Sbjct: 239 NVEHVLCSPLAPRYVVEPPRMPLSVS-LKPP 268
>ref|NP_659136.1| probable palmitoyltransferase ZDHHC5 [Mus musculus].
Length = 715
Score = 186 bits (471), Expect = 6e-47
Identities = 102/256 (39%), Positives = 138/256 (53%), Gaps = 2/256 (0%)
Frame = +2
Query: 455 ILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAF 634
++G TLFFAF C L++ +SPA+P++ A++FLF +A +F DPG+ PRA DE
Sbjct: 24 LVGATTLFFAFTCPGLSLNVSPAVPIYNAIMFLFVLANFSMATFMDPGIFPRAEEDEDK- 82
Query: 635 IEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVER 814
E + A P K +I V++K+C TC+ +RPPR SHCS+CDNCVE
Sbjct: 83 -EDDFRA------------PLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEE 129
Query: 815 FDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPG 994
FDHHCPWV NC+G+RNYR VF F ++YV + +E L
Sbjct: 130 FDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYV------LYHIEELSGVRT 183
Query: 995 TVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKN 1168
V ++C L+ V GLTGFH LVA +TTNE + G + G NP+++G N
Sbjct: 184 AVTMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFRGG---VNPFTNG-CCNN 239
Query: 1169 CCEVLCGPLPPSVLDR 1216
VLC P L R
Sbjct: 240 VSRVLCSSPAPRYLGR 255
>ref|NP_955013.1| probable palmitoyltransferase ZDHHC19 [Mus musculus].
Length = 347
Score = 101 bits (251), Expect = 2e-21
Identities = 52/145 (35%), Positives = 71/145 (48%)
Frame = +2
Query: 434 FYLTLFLILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRA 613
F +TL L L LFF F CR+L A P LF+ + +L+ +FSDPG++ R
Sbjct: 33 FNVTLLLFLSG--LFFGFPCRWLVQNGEWAFPAITGPLFILTFFSLVSLNFSDPGILHRG 90
Query: 614 LPDEAAFIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSI 793
E P + ++N + +L++C C RPPR HC
Sbjct: 91 STKE--------------------DPMTVHVVRVNQRAFRLEWCPKCLFHRPPRTYHCPW 130
Query: 794 CDNCVERFDHHCPWVGNCVGKRNYR 868
C+ CVE FDHHC WV NC+G RN+R
Sbjct: 131 CNICVEDFDHHCKWVNNCIGHRNFR 155
>ref|NP_083768.4| probable palmitoyltransferase ZDHHC20 [Mus musculus].
Length = 368
Score = 86.3 bits (212), Expect = 7e-17
Identities = 47/129 (36%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Frame = +2
Query: 734 LKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXY 913
++YC C++ +P RA HCS CD CV + DHHCPWV NCVG NY+ +
Sbjct: 125 IRYCEKCQLIKPDRAHHCSACDRCVLKMDHHCPWVNNCVGFTNYKFFMLFLLYSLLYCLF 184
Query: 914 VFAFNIVYVALKSLKIGFLE-TLKETPGTVLEVLICFFT----LWSVVGLTGFHTFLVAL 1078
V A + Y +K E T+ P VL FF SV+ L +H +LV
Sbjct: 185 VAATVLEYF----IKFWTNEPTVLNFPSAKFHVLFLFFVSAMFFVSVLSLFSYHCWLVGK 240
Query: 1079 NQTTNEDIK 1105
N+TT E +
Sbjct: 241 NRTTIESFR 249
>ref|NP_001032851.1| probable palmitoyltransferase ZDHHC12 isoform b [Mus musculus].
Length = 267
Score = 83.6 bits (205), Expect = 4e-16
Identities = 64/224 (28%), Positives = 92/224 (41%), Gaps = 2/224 (0%)
Frame = +2
Query: 524 IPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIK 703
+P+ +L L S+ L S DPG + T PQG+ P+ +
Sbjct: 46 LPLTFLLLVLSSLLLYLAVSLMDPGYV-----------------TTQPQPQGE---PKEE 85
Query: 704 NFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXX 883
+ Q V L+ C C + +P RA HC C CV R+DHHCPW+ NCVG+RN+
Sbjct: 86 QAAMVPQAVPLRRCRHCLVLQPLRARHCRDCRRCVRRYDHHCPWMENCVGERNH--PLFV 143
Query: 884 XXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHT 1063
++ + + L+ + L L+ T L+ F V L H
Sbjct: 144 AYLALQLVVLLWGLCLAWSGLQFFQPWGL-WLRSTGLLFTTFLLLSFFALVVALLLASHL 202
Query: 1064 FLVALNQTTNEDIKGSWTG--KNRVQNPYSHGNIVKNCCEVLCG 1189
+LVA N TT E I + R NP+ G +N CG
Sbjct: 203 YLVARNTTTWEFISSHRIAYLRQRTSNPFDRGP-TRNLAHFFCG 245
>ref|NP_079704.2| probable palmitoyltransferase ZDHHC12 isoform a [Mus musculus].
Length = 281
Score = 83.6 bits (205), Expect = 4e-16
Identities = 64/224 (28%), Positives = 92/224 (41%), Gaps = 2/224 (0%)
Frame = +2
Query: 524 IPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIK 703
+P+ +L L S+ L S DPG + T PQG+ P+ +
Sbjct: 60 LPLTFLLLVLSSLLLYLAVSLMDPGYV-----------------TTQPQPQGE---PKEE 99
Query: 704 NFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXX 883
+ Q V L+ C C + +P RA HC C CV R+DHHCPW+ NCVG+RN+
Sbjct: 100 QAAMVPQAVPLRRCRHCLVLQPLRARHCRDCRRCVRRYDHHCPWMENCVGERNH--PLFV 157
Query: 884 XXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHT 1063
++ + + L+ + L L+ T L+ F V L H
Sbjct: 158 AYLALQLVVLLWGLCLAWSGLQFFQPWGL-WLRSTGLLFTTFLLLSFFALVVALLLASHL 216
Query: 1064 FLVALNQTTNEDIKGSWTG--KNRVQNPYSHGNIVKNCCEVLCG 1189
+LVA N TT E I + R NP+ G +N CG
Sbjct: 217 YLVARNTTTWEFISSHRIAYLRQRTSNPFDRGP-TRNLAHFFCG 259
>ref|NP_848482.1| palmitoyltransferase ZDHHC2 [Mus musculus].
Length = 366
Score = 81.6 bits (200), Expect = 2e-15
Identities = 42/140 (30%), Positives = 70/140 (50%)
Frame = +2
Query: 734 LKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXY 913
++YC C++ +P R HCS+CD C+ + DHHCPWV NCVG NY+ +
Sbjct: 125 IRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLF 184
Query: 914 VFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTN 1093
+ A ++ Y ++ G +T + L F++ S+ L G+H +LV+ N++T
Sbjct: 185 IAATDLQYF-IRFWTNGLPDTQAKFHIMFLFFAAAMFSV-SLSSLFGYHCWLVSKNKSTL 242
Query: 1094 EDIKGSWTGKNRVQNPYSHG 1153
E + +N +S G
Sbjct: 243 EAFRNPVFRHGTDKNGFSLG 262
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 55,150,274
Number of extensions: 1550075
Number of successful extensions: 6265
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 6208
Number of HSP's successfully gapped: 26
Length of query: 551
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 445
Effective length of database: 12,433,743
Effective search space: 5533015635
Effective search space used: 5533015635
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007536
(1654 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003135413.2| PREDICTED: palmitoyltransferase ZDHHC9 isofo... 662 0.0
Alignment gi|XP_003360487.1| PREDICTED: palmitoyltransferase ZDHHC9 [Sus ... 662 0.0
Alignment gi|XP_003127782.2| PREDICTED: palmitoyltransferase ZDHHC18 [Sus... 372 e-103
Alignment gi|XP_003121171.2| PREDICTED: probable palmitoyltransferase ZDH... 277 1e-74
Alignment gi|XP_001929688.1| PREDICTED: probable palmitoyltransferase ZDH... 188 9e-48
Alignment gi|XP_003122761.1| PREDICTED: probable palmitoyltransferase ZDH... 185 7e-47
Alignment gi|XP_003353898.1| PREDICTED: probable palmitoyltransferase ZDH... 146 4e-35
Alignment gi|XP_003132663.1| PREDICTED: probable palmitoyltransferase ZDH... 103 3e-22
Alignment gi|XP_003134243.2| PREDICTED: palmitoyltransferase ZDHHC2-like ... 83 5e-16
Alignment gi|XP_003122272.2| PREDICTED: probable palmitoyltransferase ZDH... 81 1e-15
>ref|XP_003135413.2| PREDICTED: palmitoyltransferase ZDHHC9 isoform 2 [Sus scrofa].
Length = 364
Score = 662 bits (1708), Expect = 0.0
Identities = 321/335 (95%), Positives = 321/335 (95%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 240
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 241 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 300
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN 1327
ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN
Sbjct: 301 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN 335
>ref|XP_003360487.1| PREDICTED: palmitoyltransferase ZDHHC9 [Sus scrofa].
Length = 364
Score = 662 bits (1708), Expect = 0.0
Identities = 321/335 (95%), Positives = 321/335 (95%)
Frame = +2
Query: 323 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 502
MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL
Sbjct: 1 MSVMVVRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYL 60
Query: 503 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 682
AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ
Sbjct: 61 AVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQ 120
Query: 683 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 862
RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN
Sbjct: 121 RPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRN 180
Query: 863 YRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 1042
YR YVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV
Sbjct: 181 YRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVV 240
Query: 1043 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 1222
GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG
Sbjct: 241 GLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDRRG 300
Query: 1223 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN 1327
ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN
Sbjct: 301 ILPLEESGSRPPSTQEASTSLLPQSPAPTEHLSAN 335
>ref|XP_003127782.2| PREDICTED: palmitoyltransferase ZDHHC18 [Sus scrofa].
Length = 345
Score = 372 bits (954), Expect = e-103
Identities = 173/323 (53%), Positives = 226/323 (69%), Gaps = 3/323 (0%)
Frame = +2
Query: 338 VRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFFAFECRYLAVQLS 517
+ ++ RKWE PGRN F C GR+M+A G+F LTL LIL T LFF F+C +LA QL+
Sbjct: 19 IGRRPRRKWEVFPGRNRFYCGGRLMLAGHGGVFALTLLLILTTTVLFFVFDCPFLARQLT 78
Query: 518 PAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPR 697
AIP+ AA+LF F M+ LL+TSF+DPG++PRA EAA +E +I+ T + RPPPR
Sbjct: 79 LAIPIIAAILFFFVMSCLLQTSFTDPGILPRATVCEAAALEKQIDNTGSST---YRPPPR 135
Query: 698 IKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXX 877
+ IN Q+VKLKYC+TCK+FRPPR SHCS+CDNCVERFDHHCPWVGNCVG+RNYR
Sbjct: 136 TREVMINGQVVKLKYCFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFY 195
Query: 878 XXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGF 1057
++FA + ++ L+S FL TLKETP +VLE++ICFF++WS++GL+GF
Sbjct: 196 AFILSLSFLTAFIFACVVTHLTLRSQGSNFLSTLKETPASVLELVICFFSIWSILGLSGF 255
Query: 1058 HTFLVALNQTTNEDIKGSWTGKNRVQ---NPYSHGNIVKNCCEVLCGPLPPSVLDRRGIL 1228
HT+LV N TTNEDIKGSW+ K + NPYSH +++ NCC VLCGPLPPS++DRRG +
Sbjct: 256 HTYLVTSNLTTNEDIKGSWSNKRGGEASVNPYSHKSVITNCCAVLCGPLPPSLIDRRGFV 315
Query: 1229 PLEESGSRPPSTQEASTSLLPQS 1297
+ P + E + P +
Sbjct: 316 QSDTVLPSPIRSDEPACGTKPDA 338
>ref|XP_003121171.2| PREDICTED: probable palmitoyltransferase ZDHHC14-like [Sus scrofa].
Length = 410
Score = 277 bits (709), Expect = 1e-74
Identities = 125/211 (59%), Positives = 152/211 (72%), Gaps = 2/211 (0%)
Frame = +2
Query: 650 EATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHC 829
+ NG G RPPPR K IN Q VKLKYC+TCKIFRPPRASHCS+CDNCVERFDHHC
Sbjct: 58 DIANGTSSGGYRPPPRTKEVIINGQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHC 117
Query: 830 PWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEV 1009
PWVGNCVGKRNYR ++FAF I +V L+S + GFL LK+TPGTVLE
Sbjct: 118 PWVGNCVGKRNYRFFYMFILSLSFLTVFIFAFVITHVTLRSQQAGFLNALKDTPGTVLEA 177
Query: 1010 LICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQ--NPYSHGNIVKNCCEVL 1183
++CFF++WS+VGL+GFHT+L++ NQTTNEDIKGSW+ K + NPYS+GNI NCC L
Sbjct: 178 VVCFFSVWSIVGLSGFHTYLISSNQTTNEDIKGSWSNKRGKENYNPYSYGNIFTNCCVAL 237
Query: 1184 CGPLPPSVLDRRGILPLEESGSRPPSTQEAS 1276
CGP+ PS++DRRG + + PS A+
Sbjct: 238 CGPISPSLIDRRGYIQPDTPQPAAPSNGMAA 268
>ref|XP_001929688.1| PREDICTED: probable palmitoyltransferase ZDHHC8 [Sus scrofa].
Length = 764
Score = 188 bits (477), Expect = 9e-48
Identities = 107/263 (40%), Positives = 140/263 (53%), Gaps = 2/263 (0%)
Frame = +2
Query: 452 LILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAA 631
L++G+ TLFF F C +L +SPA+PV+ +LFLF +A +F DPGV PRA DE
Sbjct: 23 LLVGSSTLFFVFTCPWLTRAVSPAVPVYNGILFLFVLANFSMATFMDPGVFPRADEDEDK 82
Query: 632 FIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVE 811
E + A P KN + V++K+C TC +RPPR SHCS+CDNCVE
Sbjct: 83 --EDDFRA------------PLYKNVDVRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVE 128
Query: 812 RFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETP 991
FDHHCPWV NC+G+RNYR V AF +VYV + +G T
Sbjct: 129 DFDHHCPWVNNCIGRRNYRYFFLFLLSLSAHMVGVVAFGLVYVLNHAEGLGAAHT----- 183
Query: 992 GTVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVK 1165
T+ ++C L+ V+GLTGFH LV +TTNE + G + G NP++ G
Sbjct: 184 -TITMAVMCVAGLFFIPVIGLTGFHVVLVTRGRTTNEQVTGKFRGG---VNPFTRG-CYG 238
Query: 1166 NCCEVLCGPLPPSVLDRRGILPL 1234
N VLC PL P + LPL
Sbjct: 239 NVEHVLCSPLAPRYVVEPPRLPL 261
>ref|XP_003122761.1| PREDICTED: probable palmitoyltransferase ZDHHC5 isoform 1 [Sus
scrofa].
Length = 715
Score = 185 bits (469), Expect = 7e-47
Identities = 102/256 (39%), Positives = 138/256 (53%), Gaps = 2/256 (0%)
Frame = +2
Query: 455 ILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAF 634
++G TLFFAF C L++ +SPA+P++ A++FLF +A +F DPG+ PRA DE
Sbjct: 24 LVGATTLFFAFTCPGLSLSVSPAVPIYNAIVFLFVLANFSMATFMDPGIFPRAEEDEDK- 82
Query: 635 IEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVER 814
E + A P K +I V++K+C TC+ +RPPR SHCS+CDNCVE
Sbjct: 83 -EDDFRA------------PLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEE 129
Query: 815 FDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPG 994
FDHHCPWV NC+G+RNYR VF F ++YV + +E L
Sbjct: 130 FDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYV------LYHMEELSGVCT 183
Query: 995 TVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSHGNIVKN 1168
V ++C L+ V GLTGFH LVA +TTNE + G + G NP+++G N
Sbjct: 184 AVTMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFRGG---VNPFTNG-CCNN 239
Query: 1169 CCEVLCGPLPPSVLDR 1216
VLC P L R
Sbjct: 240 VSRVLCSSPAPRYLGR 255
>ref|XP_003353898.1| PREDICTED: probable palmitoyltransferase ZDHHC5 isoform 2 [Sus
scrofa].
Length = 652
Score = 146 bits (368), Expect = 4e-35
Identities = 84/214 (39%), Positives = 109/214 (50%), Gaps = 2/214 (0%)
Frame = +2
Query: 581 SFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKI 760
+F DPG+ PRA DE E + A P K +I V++K+C TC+
Sbjct: 3 TFMDPGIFPRAEEDEDK--EDDFRA------------PLYKTVEIKGIQVRMKWCATCRF 48
Query: 761 FRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYV 940
+RPPR SHCS+CDNCVE FDHHCPWV NC+G+RNYR VF F ++YV
Sbjct: 49 YRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYV 108
Query: 941 ALKSLKIGFLETLKETPGTVLEVLICFFTLW--SVVGLTGFHTFLVALNQTTNEDIKGSW 1114
+ +E L V ++C L+ V GLTGFH LVA +TTNE + G +
Sbjct: 109 ------LYHMEELSGVCTAVTMAVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKF 162
Query: 1115 TGKNRVQNPYSHGNIVKNCCEVLCGPLPPSVLDR 1216
G NP+++G N VLC P L R
Sbjct: 163 RGG---VNPFTNG-CCNNVSRVLCSSPAPRYLGR 192
>ref|XP_003132663.1| PREDICTED: probable palmitoyltransferase ZDHHC19-like [Sus scrofa].
Length = 392
Score = 103 bits (257), Expect = 3e-22
Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 9/294 (3%)
Frame = +2
Query: 452 LILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAA 631
L++ LFFAF CR+LA + A P+ +LF+ + +L+ +FSDPG++ R
Sbjct: 37 LLITFSGLFFAFPCRWLAQKGEWAFPIVTGLLFVLTFFSLISLNFSDPGILHR------- 89
Query: 632 FIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVE 811
G+ QG P + +N++ +L++C C PPR HC C+ CVE
Sbjct: 90 ----------GSNEQG---PMVVHVVWVNHRAFRLQWCQKCCFHCPPRTHHCPSCNICVE 136
Query: 812 RFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETP 991
FDHHC WV NC+G RN+R + ++++ +++ + F ++ +
Sbjct: 137 DFDHHCKWVNNCIGHRNFRFFMLLVLSLCLYSGAILVTCLIFL-VRTTHLPF--SMDKAI 193
Query: 992 GTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTN-EDIKGSWTGKNRV---QNPYSHGNI 1159
V+ V F + FL+ L Q + + S+ GK R NP+ +G
Sbjct: 194 AIVVAVPAAGFMV---------PLFLLLLIQAMSVSAAERSYEGKCRYLQGYNPFDYG-C 243
Query: 1160 VKNCCEVLCGPLPP-----SVLDRRGILPLEESGSRPPSTQEASTSLLPQSPAP 1306
N +C PL P +V +R + P + P S LP P P
Sbjct: 244 ASNWYLTICAPLGPKYMAEAVWLQRVVGPDQVPTQNPHFPTSPSALSLPALPGP 297
>ref|XP_003134243.2| PREDICTED: palmitoyltransferase ZDHHC2-like [Sus scrofa].
Length = 457
Score = 82.8 bits (203), Expect = 5e-16
Identities = 43/140 (30%), Positives = 70/140 (50%)
Frame = +2
Query: 734 LKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXXXXXXXXXXXY 913
++YC C++ +P R HCS+CD C+ + DHHCPWV NCVG NY+ +
Sbjct: 216 IRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLF 275
Query: 914 VFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTN 1093
+ A ++ Y +K G +T + L F++ S+ L G+H +LV+ N++T
Sbjct: 276 IAATDLQYF-IKFWTNGLPDTQAKFHIMFLFFAAAMFSV-SLSSLFGYHCWLVSKNKSTL 333
Query: 1094 EDIKGSWTGKNRVQNPYSHG 1153
E + +N +S G
Sbjct: 334 EAFRSPVFRHGTDKNGFSLG 353
>ref|XP_003122272.2| PREDICTED: probable palmitoyltransferase ZDHHC12-like [Sus scrofa].
Length = 263
Score = 81.3 bits (199), Expect = 1e-15
Identities = 66/226 (29%), Positives = 91/226 (40%), Gaps = 4/226 (1%)
Frame = +2
Query: 524 IPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEAAFIEMEIEATNGAVPQGQRPPPRIK 703
+P+ +L L S+ L S DPG + LP E E VPQ
Sbjct: 39 LPLTFLLLVLGSLLLYLAVSLMDPGYV-NVLPQPQ---EEAKEEQTAMVPQA-------- 86
Query: 704 NFQINNQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRXXXXX 883
+ L+ C C + +P RA HC C CV R+DHHCPW+ NCVG+RN+
Sbjct: 87 --------IPLRRCRFCMVLQPLRARHCRECRRCVRRYDHHCPWMENCVGERNH-----P 133
Query: 884 XXXXXXXXXYVFAFNIVYVALKSLKIGFLETLKETPGTVLEVLICFFTLWSVVG--LTGF 1057
V +Y+A L+ L +L +L+S+V L
Sbjct: 134 LFVAYLALQLVVLLWGLYLAWSGLRFFQPWGLWLRSSGLLLATFLLLSLFSLVAGLLLAS 193
Query: 1058 HTFLVALNQTTNEDIKGSWTG--KNRVQNPYSHGNIVKNCCEVLCG 1189
H +LVA N TT E I + R NP+ G + +N CG
Sbjct: 194 HLYLVASNTTTWEFISSHRIAYLRQRPGNPFDRG-LTRNLAHFFCG 238
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 41,336,797
Number of extensions: 1202307
Number of successful extensions: 5118
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 5085
Number of HSP's successfully gapped: 22
Length of query: 551
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 447
Effective length of database: 8,754,644
Effective search space: 3913325868
Effective search space used: 3913325868
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007536
(1654 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_ChrX 609 e-171
Sscrofa_Chr06 68 2e-08
Sscrofa_Chr01 60 4e-06
>Sscrofa_ChrX
|| Length = 144288218
Score = 609 bits (307), Expect = e-171
Identities = 307/307 (100%)
Strand = Plus / Minus
Query: 186 agggctggaaattggacttttgatgatgtttgacccggcggcaacaatagcaggcaacgt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122203244 agggctggaaattggacttttgatgatgtttgacccggcggcaacaatagcaggcaacgt 122203185
Query: 246 gatttcaaagctgggctcaacttctgtttcttcccgcttgtaatcataaagcccattttg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122203184 gatttcaaagctgggctcaacttctgtttcttcccgcttgtaatcataaagcccattttg 122203125
Query: 306 gaccaggaattccaatcatgtctgtgatggtggtgagaaagaaggtgacacggaaatggg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122203124 gaccaggaattccaatcatgtctgtgatggtggtgagaaagaaggtgacacggaaatggg 122203065
Query: 366 agaaactcccaggcaggaacaccttctgctgtgatggccgagtcatgatggcccggcaaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122203064 agaaactcccaggcaggaacaccttctgctgtgatggccgagtcatgatggcccggcaaa 122203005
Query: 426 agggcatcttctacttgaccctcttcctcatcctggggacgtgtacgctcttcttcgctt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122203004 agggcatcttctacttgaccctcttcctcatcctggggacgtgtacgctcttcttcgctt 122202945
Query: 486 tcgagtg 492
|||||||
Sbjct: 122202944 tcgagtg 122202938
Score = 406 bits (205), Expect = e-110
Identities = 316/353 (89%), Gaps = 7/353 (1%)
Strand = Plus / Minus
Query: 1300 ggccccgacagaacatctgagcgcgaacgagatgccggaggataccagcactcctgaaga 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122171762 ggccccgacagaacatctgagcgcgaacgagatgccggaggataccagcactcctgaaga 122171703
Query: 1360 gatgccgnnnnnnnnnnnnnnnnnnnnnnngcaggaggtaaccgaagctgagaagtagcc 1419
||||||| ||||||||| ||||||||||||||||||||
Sbjct: 122171702 gatgccgcccccagagcccccagagcccccgcaggaggtgaccgaagctgagaagtagcc 122171643
Query: 1420 cgtctgtggaagagacttttgttgtgttcaattagggctgtgagagatttaaggggagaa 1479
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122171642 cgcctgtggaagagacttttgttgtgttcaattagggctgtgagagatttaaggggagaa 122171583
Query: 1480 gataaacccgagacaaagagcaagtaagctgtcccctgtactgtttttcctttggtcttt 1539
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 122171582 gataaacccgagacaaagagcaagtaagctgtccctgttactgtttttcctttggtcttt 122171523
Query: 1540 attcacccagttgtaaactggcattttcctgctgcaaactttttt--aattctggact-c 1596
|||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| |
Sbjct: 122171522 attcacccagttgtaaactggcattttcttgctgcaaactttttttaatttctggactcc 122171463
Query: 1597 aagcagtcacag-agatgtcggtca-ctctggt-actggac-aacgggtccct 1645
|||||||||||| |||||||||||| ||||||| ||||||| |||||||||||
Sbjct: 122171462 aagcagtcacagaagatgtcggtcacctctggtaactggacaaacgggtccct 122171410
Score = 373 bits (188), Expect = e-100
Identities = 188/188 (100%)
Strand = Plus / Minus
Query: 1 ccattcggccagcggtgggcggttgccacagctggtttagggcccggaccattggggccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122205025 ccattcggccagcggtgggcggttgccacagctggtttagggcccggaccattggggccc 122204966
Query: 61 cttgtcaggaggaggcagccttcgggctggggagtagtcgctgccacctcgggcggccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122204965 cttgtcaggaggaggcagccttcgggctggggagtagtcgctgccacctcgggcggccga 122204906
Query: 121 cgcggtcccctgggatagtgcacttcctggcctcgtttccccgctgagttcgctctccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122204905 cgcggtcccctgggatagtgcacttcctggcctcgtttccccgctgagttcgctctccgg 122204846
Query: 181 ggttcagg 188
||||||||
Sbjct: 122204845 ggttcagg 122204838
Score = 319 bits (161), Expect = 3e-84
Identities = 161/161 (100%)
Strand = Plus / Minus
Query: 649 agaagctaccaatggtgcggtcccccaaggccagcgaccaccccctcgcatcaagaattt 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122185208 agaagctaccaatggtgcggtcccccaaggccagcgaccaccccctcgcatcaagaattt 122185149
Query: 709 ccagataaacaaccagatcgtgaagctgaagtactgttacacatgcaagatcttccggcc 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122185148 ccagataaacaaccagatcgtgaagctgaagtactgttacacatgcaagatcttccggcc 122185089
Query: 769 tccccgggcctctcactgcagcatctgtgacaactgcgtgg 809
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 122185088 tccccgggcctctcactgcagcatctgtgacaactgcgtgg 122185048
Score = 319 bits (161), Expect = 3e-84
Identities = 161/161 (100%)
Strand = Plus / Minus
Query: 490 gtgccgctacctggctgtccagctgtctcctgccatccctgtgtttgctgccatgctctt 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122192003 gtgccgctacctggctgtccagctgtctcctgccatccctgtgtttgctgccatgctctt 122191944
Query: 550 ccttttctccatggctacactgttgaggaccagcttcagtgaccctggagtgatccctcg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122191943 ccttttctccatggctacactgttgaggaccagcttcagtgaccctggagtgatccctcg 122191884
Query: 610 ggccctaccagatgaagcagctttcatagaaatggagatag 650
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 122191883 ggccctaccagatgaagcagctttcatagaaatggagatag 122191843
Score = 276 bits (139), Expect = 4e-71
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 809 gagcgcttcgaccatcactgcccctgggtgggtaattgtgttggaaagaggaactaccgc 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122177931 gagcgcttcgaccatcactgcccctgggtgggtaattgtgttggaaagaggaactaccgc 122177872
Query: 869 tacttctacctcttcatcctttctctctccctcctcaccatctacgtcttcgccttcaac 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122177871 tacttctacctcttcatcctttctctctccctcctcaccatctacgtcttcgccttcaac 122177812
Query: 929 atcgtctatgtggccctca 947
|||||||||||||||||||
Sbjct: 122177811 atcgtctatgtggccctca 122177793
Score = 208 bits (105), Expect = 7e-51
Identities = 105/105 (100%)
Strand = Plus / Minus
Query: 995 actgttctagaagtactcatttgcttcttcacactctggtccgtcgtgggactgactgga 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122175621 actgttctagaagtactcatttgcttcttcacactctggtccgtcgtgggactgactgga 122175562
Query: 1055 ttccacactttccttgtggctctcaaccagacaaccaatgaagat 1099
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122175561 ttccacactttccttgtggctctcaaccagacaaccaatgaagat 122175517
Score = 200 bits (101), Expect = 2e-48
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 1201 cagcgtgctggatcgaaggggtattttgccactggaggaaagtggaagtcggcctcccag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122173974 cagcgtgctggatcgaaggggtattttgccactggaggaaagtggaagtcggcctcccag 122173915
Query: 1261 tactcaagaggctagcaccagcctcttgcctcagagcccgg 1301
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 122173914 tactcaagaggctagcaccagcctcttgcctcagagcccgg 122173874
Score = 198 bits (100), Expect = 7e-48
Identities = 103/104 (99%)
Strand = Plus / Minus
Query: 1100 atcaaaggctcatggacagggaagaatcgtgttcagaatccctacagccatggcaacatt 1159
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 122174467 atcaaaggctcatggacagggaagaatcgtgttcagaatccctatagccatggcaacatt 122174408
Query: 1160 gtgaagaactgctgtgaagtgttgtgtggccccttgccccccag 1203
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122174407 gtgaagaactgctgtgaagtgttgtgtggccccttgccccccag 122174364
Score = 97.6 bits (49), Expect = 2e-17
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 948 aatccttgaaaattggcttcctggagacattgaaagaaactcctggaac 996
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122176861 aatccttgaaaattggcttcctggagacattgaaagaaactcctggaac 122176813
>Sscrofa_Chr06
|| Length = 157765593
Score = 67.9 bits (34), Expect = 2e-08
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 728 gtgaagctgaagtactgttacacatgcaagatcttccggcctccccgggcctctcactgc 787
||||||||||||||||| | ||| |||||||| || ||||| || ||| |||| ||||||
Sbjct: 77745566 gtgaagctgaagtactgcttcacctgcaagatgtttcggccaccgcggacctcacactgc 77745625
Query: 788 agcatctgtgacaactgcgtgg 809
|| ||||||||||||| ||||
Sbjct: 77745626 agtgtctgtgacaactgtgtgg 77745647
>Sscrofa_Chr01
|| Length = 315321322
Score = 60.0 bits (30), Expect = 4e-06
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 408 tcatgatggcccggcaaaagggcatcttctacttgaccctcttcctcatcctgg 461
|||||||||||||||| | |||| |||||||| |||| ||| ||||||||||||
Sbjct: 11655150 tcatgatggcccggcagacgggcgtcttctacctgactctcatcctcatcctgg 11655097
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 47,969,823
Number of extensions: 438
Number of successful extensions: 438
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 438
Number of HSP's successfully gapped: 13
Length of query: 1654
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1632
Effective length of database: 2,808,408,574
Effective search space: 4583322792768
Effective search space used: 4583322792768
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)