Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007688
(1117 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777084.1| ADP/ATP translocase 2 [Bos taurus]. 573 e-163
Alignment gi|NP_777085.1| ADP/ATP translocase 3 [Bos taurus]. 538 e-153
Alignment gi|NP_777083.1| ADP/ATP translocase 1 [Bos taurus]. 526 e-149
Alignment gi|XP_002689470.1| PREDICTED: ADP/ATP translocase 1-like [Bos t... 422 e-118
Alignment gi|XP_001254615.1| PREDICTED: ADP/ATP translocase 1-like [Bos t... 422 e-118
Alignment gi|NP_001039965.1| ADP/ATP translocase 4 [Bos taurus]. 416 e-116
Alignment gi|NP_001092536.1| calcium-binding mitochondrial carrier protei... 117 1e-26
Alignment gi|NP_001178961.1| solute carrier family 25 member 42 [Bos taur... 106 4e-23
Alignment gi|XP_002688568.1| PREDICTED: solute carrier family 25, member ... 106 4e-23
Alignment gi|XP_001789552.1| PREDICTED: RIKEN cDNA 4930443G12-like isofor... 102 6e-22
>ref|NP_777084.1| ADP/ATP translocase 2 [Bos taurus].
Length = 298
Score = 573 bits (1476), Expect = e-163
Identities = 286/298 (95%), Positives = 286/298 (95%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 298
>ref|NP_777085.1| ADP/ATP translocase 3 [Bos taurus].
Length = 298
Score = 538 bits (1385), Expect = e-153
Identities = 262/296 (88%), Positives = 275/296 (92%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MT+ A+SFAKDFLAGG+AAAISKTAVAPIERVKLLLQVQHASKQI ADKQYKGI+DC+VR
Sbjct: 1 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGK+G+EREFRGLGDCLVKI KSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKSGSEREFRGLGDCLVKITKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHI +SWMIAQ+VTAVAG+ SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKK 986
QSGRKG DIMY GT+DCWRKI +DEG KAFFKGAWSNVLRGMGGAFVLVLYDE+KK
Sbjct: 241 QSGRKGADIMYKGTVDCWRKILKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKK 296
>ref|NP_777083.1| ADP/ATP translocase 1 [Bos taurus].
Length = 298
Score = 526 bits (1354), Expect = e-149
Identities = 256/297 (86%), Positives = 271/297 (91%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
M+D A+SF KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MSDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGK A+REF GLG+C+ KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 989
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKF
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 297
>ref|XP_002689470.1| PREDICTED: ADP/ATP translocase 1-like [Bos taurus].
Length = 401
Score = 422 bits (1086), Expect = e-118
Identities = 204/250 (81%), Positives = 220/250 (88%), Gaps = 2/250 (0%)
Frame = +3
Query: 174 VAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQ 353
V PIERVKLLLQVQHASKQI+A+KQYKGIIDCVVRIPKEQG LSFWRGNLANVIRYFPTQ
Sbjct: 104 VTPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 163
Query: 354 ALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV 533
ALNFAFKDKYKQIFLGGVD+ QFWRYF TSLCFVYPLDFARTRLAADV
Sbjct: 164 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV 223
Query: 534 GKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS--VQGIIIYRAAYFGIYDTAKGMLP 707
GK A+REF GLG+C+ KI+KSDG+RGLYQGFNVS VQGIIIYRAAYFG+YDTAKGMLP
Sbjct: 224 GKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQVQGIIIYRAAYFGVYDTAKGMLP 283
Query: 708 DPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIAR 887
DPKN HI +SWMIAQ+VTAVAGL SYPFDT RRRMMMQSG+KG DIMYTGT+DCWRKIA+
Sbjct: 284 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTARRRMMMQSGQKGADIMYTGTVDCWRKIAK 343
Query: 888 DEGAKAFFKG 917
DEG + +F G
Sbjct: 344 DEGVRLYFFG 353
>ref|XP_001254615.1| PREDICTED: ADP/ATP translocase 1-like [Bos taurus].
Length = 401
Score = 422 bits (1086), Expect = e-118
Identities = 204/250 (81%), Positives = 220/250 (88%), Gaps = 2/250 (0%)
Frame = +3
Query: 174 VAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQ 353
V PIERVKLLLQVQHASKQI+A+KQYKGIIDCVVRIPKEQG LSFWRGNLANVIRYFPTQ
Sbjct: 104 VTPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 163
Query: 354 ALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV 533
ALNFAFKDKYKQIFLGGVD+ QFWRYF TSLCFVYPLDFARTRLAADV
Sbjct: 164 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV 223
Query: 534 GKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS--VQGIIIYRAAYFGIYDTAKGMLP 707
GK A+REF GLG+C+ KI+KSDG+RGLYQGFNVS VQGIIIYRAAYFG+YDTAKGMLP
Sbjct: 224 GKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQVQGIIIYRAAYFGVYDTAKGMLP 283
Query: 708 DPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIAR 887
DPKN HI +SWMIAQ+VTAVAGL SYPFDT RRRMMMQSG+KG DIMYTGT+DCWRKIA+
Sbjct: 284 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTARRRMMMQSGQKGADIMYTGTVDCWRKIAK 343
Query: 888 DEGAKAFFKG 917
DEG + +F G
Sbjct: 344 DEGVRLYFFG 353
>ref|NP_001039965.1| ADP/ATP translocase 4 [Bos taurus].
Length = 323
Score = 416 bits (1069), Expect = e-116
Identities = 204/291 (70%), Positives = 235/291 (80%)
Frame = +3
Query: 111 AVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKE 290
A SF KD LAGGVAAA+SKT VAPIERVKLLLQVQ +SKQI+ + QYKGI+DC+VRIP+E
Sbjct: 21 ATSFGKDLLAGGVAAAVSKTTVAPIERVKLLLQVQASSKQISPEAQYKGIVDCLVRIPRE 80
Query: 291 QGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXX 470
QG LS+WRGNLANVIRYFPTQALNFAFKDKYKQ+F+ GV+K QFWR+F
Sbjct: 81 QGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAG 140
Query: 471 XTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGI 650
TSLC VYPLDFARTRL AD+GK ER+F+GLGDC++KI KSDGI GLYQGF VSVQGI
Sbjct: 141 ATSLCVVYPLDFARTRLGADIGKGPEERQFKGLGDCIMKIAKSDGIVGLYQGFGVSVQGI 200
Query: 651 IIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
I+YRA+YFG YDT KG+LP PK TH +S+ IAQ VT +G+ SYPFDTVRRRMMMQSG
Sbjct: 201 IVYRASYFGAYDTVKGLLPKPKETHFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGE 260
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIK 983
+ Y GTLDC+ KI + EG AFF+GA+SN+LRG GGA VLVLYD+IK
Sbjct: 261 --AERQYKGTLDCFMKIYQQEGIGAFFRGAFSNILRGTGGALVLVLYDKIK 309
>ref|NP_001092536.1| calcium-binding mitochondrial carrier protein SCaMC-1 [Bos taurus].
Length = 477
Score = 117 bits (294), Expect = 1e-26
Identities = 89/294 (30%), Positives = 141/294 (47%), Gaps = 7/294 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ LAGGVA A+S+T+ AP++R+K+++QV H SK + Y G V KE G+ S
Sbjct: 196 RQLLAGGVAGAVSRTSTAPLDRLKVMMQV-HGSKSAKMN-IYGGFQQMV----KEGGIRS 249
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NVI+ P A+ F ++YK++ K F R+ T+
Sbjct: 250 LWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERF-----VSGSMAGATAQT 304
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
F+YP++ +TRLA VGK G ++ G+ DC KI K +G+ Y+G+ ++ GII Y
Sbjct: 305 FIYPMEVLKTRLA--VGKTG---QYSGMFDCAKKILKYEGMGAFYKGYVPNLLGIIPYAG 359
Query: 666 AYFGIYDTAK-----GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSG- 827
+Y+ K D N + + + L SYP VR RM Q+
Sbjct: 360 IDLAVYELLKSHWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRMQAQAMI 419
Query: 828 RKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK 986
K + G +R+I EG ++G N ++ + + V+Y+ +K+
Sbjct: 420 EKSPQLNMVG---LFRRILSKEGLPGLYRGITPNFMKVLPAVGISYVVYENMKQ 470
Score = 52.0 bits (123), Expect = 9e-07
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 1/192 (0%)
Frame = +3
Query: 132 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFW 311
F++G +A A ++T + P+E +K L V QY G+ DC +I K +G+ +F+
Sbjct: 292 FVSGSMAGATAQTFIYPMEVLKTRLAVGKTG-------QYSGMFDCAKKILKYEGMGAFY 344
Query: 312 RGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFV 491
+G + N++ P ++ A + K +L K + L
Sbjct: 345 KGYVPNLLGIIPYAGIDLAVYELLKSHWLDNFAKDSVNPGVMVLLGCGALSSTCGQLAS- 403
Query: 492 YPLDFARTRLAADVG-KAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAA 668
YPL RTR+ A + + GL +I +G+ GLY+G + ++
Sbjct: 404 YPLALVRTRMQAQAMIEKSPQLNMVGL---FRRILSKEGLPGLYRGITPNFMKVLPAVGI 460
Query: 669 YFGIYDTAKGML 704
+ +Y+ K L
Sbjct: 461 SYVVYENMKQTL 472
>ref|NP_001178961.1| solute carrier family 25 member 42 [Bos taurus].
Length = 318
Score = 106 bits (264), Expect = 4e-23
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 12/281 (4%)
Frame = +3
Query: 135 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWR 314
L+G +A A++KTAVAP++R K++ QV +SK+ +A + ++ + + +G LS WR
Sbjct: 38 LSGALAGALAKTAVAPLDRTKIIFQV--SSKRFSAKEAFRLLYFTYLH----EGFLSLWR 91
Query: 315 GNLANVIRYFPTQALNFAFKDKYKQI---FLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
GN A ++R P A+ F+ ++YK++ + G + W T+
Sbjct: 92 GNSATMVRVVPYAAIQFSAHEEYKRLLGSYYGFRGEALPPW----PRLLAGALAGTTAAS 147
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
YPLD R R+A + + + ++I + +G++ LY GF +V G+I Y
Sbjct: 148 LTYPLDLVRARMAVT-----PKEMYSNIFHVFIRISREEGLKTLYHGFVPTVLGVIPYAG 202
Query: 666 AYFGIYDTAKGM------LPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQ-- 821
F Y+T K + P P + F + + SYP D VRRRM
Sbjct: 203 LSFFTYETLKSLHREYSGRPQP---YPFERMIFGACAGLIGQSASYPLDVVRRRMQTAGV 259
Query: 822 SGRKGTDIMYTGTLDCWRKIARDEG-AKAFFKGAWSNVLRG 941
+G + T I+ T R I R+EG + +KG N L+G
Sbjct: 260 TGHQRTSIVRT-----MRTIVREEGVVRGLYKGLSMNWLKG 295
>ref|XP_002688568.1| PREDICTED: solute carrier family 25, member 42-like [Bos taurus].
Length = 318
Score = 106 bits (264), Expect = 4e-23
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 12/281 (4%)
Frame = +3
Query: 135 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWR 314
L+G +A A++KTAVAP++R K++ QV +SK+ +A + ++ + + +G LS WR
Sbjct: 38 LSGALAGALAKTAVAPLDRTKIIFQV--SSKRFSAKEAFRLLYFTYLH----EGFLSLWR 91
Query: 315 GNLANVIRYFPTQALNFAFKDKYKQI---FLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
GN A ++R P A+ F+ ++YK++ + G + W T+
Sbjct: 92 GNSATMVRVVPYAAIQFSAHEEYKRLLGSYYGFRGEALPPW----PRLLAGALAGTTAAS 147
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
YPLD R R+A + + + ++I + +G++ LY GF +V G+I Y
Sbjct: 148 LTYPLDLVRARMAVT-----PKEMYSNIFHVFIRISREEGLKTLYHGFVPTVLGVIPYAG 202
Query: 666 AYFGIYDTAKGM------LPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQ-- 821
F Y+T K + P P + F + + SYP D VRRRM
Sbjct: 203 LSFFTYETLKSLHREYSGRPQP---YPFERMIFGACAGLIGQSASYPLDVVRRRMQTAGV 259
Query: 822 SGRKGTDIMYTGTLDCWRKIARDEG-AKAFFKGAWSNVLRG 941
+G + T I+ T R I R+EG + +KG N L+G
Sbjct: 260 TGHQRTSIVRT-----MRTIVREEGVVRGLYKGLSMNWLKG 295
>ref|XP_001789552.1| PREDICTED: RIKEN cDNA 4930443G12-like isoform 1 [Bos taurus].
Length = 475
Score = 102 bits (254), Expect = 6e-22
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 11/297 (3%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
K +AGG+A +++T AP +R+K+++Q+ + ++D ++ KE G+LS
Sbjct: 195 KRLVAGGIAGGVARTCTAPFDRLKVMMQIH------SLQSGKMRLLDGFKQMVKEGGILS 248
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P AL ++YK+ K R+ T+
Sbjct: 249 LWRGNGVNVLKIAPETALKVGTYEQYKKWLSSDGAKIGIIERFI-----SGSLAGATAQT 303
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TRLA VGK G ++ G+ DC ++ K +G R ++G+ ++ GII Y
Sbjct: 304 CIYPMEVIKTRLA--VGKTG---QYSGIIDCGKQLLKQEGARAFFKGYIPNLLGIIPYAG 358
Query: 666 AYFGIYD---------TAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
+Y+ A+G L DP I I + A + S+P + +R RM
Sbjct: 359 IDLCVYEHLKNHWLEHHARGSL-DP---GIAILLGCSTLSNACGQMASFPLNLIRTRMQA 414
Query: 819 QS-GRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 983
Q+ KGT M D + K EG + FF+G N+++ + + V ++++K
Sbjct: 415 QALEEKGTTSMIQLIQDIYNK----EGKRGFFRGVTPNIIKVLPSVCISCVTFEKVK 467
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,449,016
Number of extensions: 1065071
Number of successful extensions: 3816
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 3614
Number of HSP's successfully gapped: 74
Length of query: 372
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 268
Effective length of database: 14,240,222
Effective search space: 3816379496
Effective search space used: 3816379496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007688
(1117 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_549215.2| PREDICTED: similar to solute carrier family 25,... 567 e-162
Alignment gi|XP_851701.1| PREDICTED: similar to solute carrier family 25,... 567 e-162
Alignment gi|XP_864148.1| PREDICTED: similar to solute carrier family 25,... 555 e-158
Alignment gi|XP_864192.1| PREDICTED: similar to solute carrier family 25,... 548 e-156
Alignment gi|XP_537947.2| PREDICTED: similar to ADP/ATP translocase 3 (Ad... 539 e-153
Alignment gi|XP_864170.1| PREDICTED: similar to solute carrier family 25,... 531 e-151
Alignment gi|XP_532844.2| PREDICTED: similar to solute carrier family 25,... 508 e-144
Alignment gi|XP_864217.1| PREDICTED: similar to solute carrier family 25,... 487 e-138
Alignment gi|XP_864129.1| PREDICTED: similar to ADP/ATP translocase 2 (Ad... 448 e-126
Alignment gi|XP_540952.2| PREDICTED: similar to solute carrier family 25 ... 417 e-117
>ref|XP_549215.2| PREDICTED: similar to solute carrier family 25, member 5 isoform 1
[Canis familiaris].
Length = 298
Score = 567 bits (1461), Expect = e-162
Identities = 282/298 (94%), Positives = 283/298 (94%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDA VSF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
QSGRKGTDIMYTGTLDCWRKIARDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 298
>ref|XP_851701.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 2
[Canis familiaris].
Length = 298
Score = 567 bits (1461), Expect = e-162
Identities = 282/298 (94%), Positives = 283/298 (94%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDA VSF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
QSGRKGTDIMYTGTLDCWRKIARDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 298
>ref|XP_864148.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 4
[Canis familiaris].
Length = 298
Score = 555 bits (1430), Expect = e-158
Identities = 277/298 (92%), Positives = 279/298 (93%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDA VSF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
Q + TDIMYTGTLDCWRKIARDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 241 QLWPQATDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 298
>ref|XP_864192.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 6
[Canis familiaris].
Length = 299
Score = 548 bits (1412), Expect = e-156
Identities = 277/299 (92%), Positives = 279/299 (93%), Gaps = 1/299 (0%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDA VSF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDP-KNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMM 815
VQGIIIYRAAYFGIYDTAKG L +NTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGKLAMCFENTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMM 240
Query: 816 MQSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
MQSGRKGTDIMYTGTLDCWRKIARDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 241 MQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 299
>ref|XP_537947.2| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide
translocator 2) (ANT 3) (ADP,ATP carrier protein 3)
(Solute carrier family 25, member 6) (ADP,ATP carrier
protein, isoform T2) [Canis familiaris].
Length = 470
Score = 539 bits (1388), Expect = e-153
Identities = 268/327 (81%), Positives = 288/327 (88%)
Frame = +3
Query: 6 IGHLLRSAPQPRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPI 185
+G +R A + R+P P+ AR P+ MT+ A+SFAKDFLAGG+AAAISKTAVAPI
Sbjct: 150 LGSPVRPAVRARTP------PSAARP--PAAMTEQAISFAKDFLAGGIAAAISKTAVAPI 201
Query: 186 ERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNF 365
ERVKLLLQVQHASKQI ADKQYKGI+DC+VRIPKEQGVLSFWRGNLANVIRYFPTQALNF
Sbjct: 202 ERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNF 261
Query: 366 AFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAG 545
AFKDKYKQIFLGGVDK TQFWRYF TSLCFVYPLDFARTRLAADVGK+G
Sbjct: 262 AFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSG 321
Query: 546 AEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTH 725
EREF+GLGDCLVKI KSDGIRGLYQGFNVSVQGIIIYRAAYFG+YDTAKGMLPDPKNTH
Sbjct: 322 TEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTH 381
Query: 726 IFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGAKA 905
I +SWMIAQ+VTAVAG+ SYPFDTVRRRMMMQSGRKG DIMY GT+DCWRKI +DEG KA
Sbjct: 382 IVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYKGTVDCWRKIFKDEGGKA 441
Query: 906 FFKGAWSNVLRGMGGAFVLVLYDEIKK 986
FFKGAWSNVLRGMGGAFVLVLYDE+KK
Sbjct: 442 FFKGAWSNVLRGMGGAFVLVLYDELKK 468
>ref|XP_864170.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 5
[Canis familiaris].
Length = 294
Score = 531 bits (1367), Expect = e-151
Identities = 270/298 (90%), Positives = 271/298 (90%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDA VSF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKG L WMIAQSVTAVAGLTSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGKLA----MCFEAVWMIAQSVTAVAGLTSYPFDTVRRRMMM 236
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
QSGRKGTDIMYTGTLDCWRKIARDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 237 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 294
>ref|XP_532844.2| PREDICTED: similar to solute carrier family 25, member 4 [Canis
familiaris].
Length = 298
Score = 508 bits (1308), Expect = e-144
Identities = 250/297 (84%), Positives = 264/297 (88%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
M+D A+SF KDFLAGGVAAA+SKTAVA I QVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MSDHALSFLKDFLAGGVAAAVSKTAVATIPPPLQPPQVQHASKQISAEKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGK A+REF GLGDCL KI+KSDG+RGLYQGF+VS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFSGLGDCLTKIFKSDGLRGLYQGFSVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQSVTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 989
QSGRKG DIMYTGT+DCWRKIA+DEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 297
>ref|XP_864217.1| PREDICTED: similar to solute carrier family 25, member 5 isoform 7
[Canis familiaris].
Length = 256
Score = 487 bits (1254), Expect = e-138
Identities = 252/298 (84%), Positives = 253/298 (84%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDA VSF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFL
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFL-------------------- 100
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
ADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 101 ----------------------ADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 138
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM
Sbjct: 139 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 198
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
QSGRKGTDIMYTGTLDCWRKIARDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 199 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 256
>ref|XP_864129.1| PREDICTED: similar to ADP/ATP translocase 2 (Adenine nucleotide
translocator 2) (ANT 2) (ADP,ATP carrier protein 2)
(Solute carrier family 25, member 5) (ADP,ATP carrier
protein, fibroblast isoform) isoform 3 [Canis
familiaris].
Length = 251
Score = 448 bits (1152), Expect = e-126
Identities = 234/298 (78%), Positives = 235/298 (78%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDA VSF KDFLAGGV+AAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDATVSFTKDFLAGGVSAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAK
Sbjct: 181 VQGIIIYRAAYFGIYDTAK----------------------------------------- 199
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
DIMYTGTLDCWRKIARDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 200 ------ADIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 251
>ref|XP_540952.2| PREDICTED: similar to solute carrier family 25 (mitochondrial
carrier; adenine nucleotide translocator), member 31
[Canis familiaris].
Length = 459
Score = 417 bits (1072), Expect = e-117
Identities = 210/326 (64%), Positives = 248/326 (76%)
Frame = +3
Query: 12 HLLRSAPQPRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIER 191
HL R A Q P + L + +L P+ SF KD LAGGVAAA+SKTAVAPIER
Sbjct: 131 HLQRPAMQREPPKKRLEKKSGKQLFDPA-------SFGKDLLAGGVAAAVSKTAVAPIER 183
Query: 192 VKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAF 371
VKLLLQVQ +SKQI+A+ QYKG++DC+VRIP+EQG S+WRGNLANVIRYFPTQALNFAF
Sbjct: 184 VKLLLQVQASSKQISAETQYKGMMDCLVRIPREQGFFSYWRGNLANVIRYFPTQALNFAF 243
Query: 372 KDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAGAE 551
KDKYKQ+F+ GV+K QFWR+F TSLC VYPLDFARTRL D+GK E
Sbjct: 244 KDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEE 303
Query: 552 REFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIF 731
R+F+GLGDC++KI KSDGI GLYQGF VSVQGI++YRA+YFG YDT KG+LP PK T
Sbjct: 304 RQFKGLGDCIIKIAKSDGIVGLYQGFGVSVQGIVVYRASYFGAYDTVKGLLPKPKETPFL 363
Query: 732 ISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGAKAFF 911
+S+ IAQ VT +G+ SYPFDTVRRRMMMQSG + Y GTLDC+ KI + EG AFF
Sbjct: 364 VSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGE--VERQYKGTLDCFVKIYQHEGVNAFF 421
Query: 912 KGAWSNVLRGMGGAFVLVLYDEIKKF 989
+GA+SN+LRG GGA VLVLYD+IK+F
Sbjct: 422 RGAFSNILRGTGGALVLVLYDKIKEF 447
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 43,134,898
Number of extensions: 1094025
Number of successful extensions: 4015
Number of sequences better than 1.0e-05: 71
Number of HSP's gapped: 3754
Number of HSP's successfully gapped: 102
Length of query: 372
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 268
Effective length of database: 15,407,560
Effective search space: 4129226080
Effective search space used: 4129226080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007688
(1117 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031477.1| ADP/ATP translocase 2 [Mus musculus]. 568 e-162
Alignment gi|NP_031476.3| ADP/ATP translocase 1 [Mus musculus]. 524 e-149
Alignment gi|NP_848473.2| ADP/ATP translocase 4 [Mus musculus]. 411 e-115
Alignment gi|NP_766273.1| calcium-binding mitochondrial carrier protein S... 117 2e-26
Alignment gi|NP_001007571.1| solute carrier family 25 member 42 [Mus musc... 105 5e-23
Alignment gi|NP_080153.2| calcium-binding mitochondrial carrier protein S... 104 1e-22
Alignment gi|NP_001157830.1| calcium-binding mitochondrial carrier protei... 101 9e-22
Alignment gi|NP_001157829.1| calcium-binding mitochondrial carrier protei... 101 9e-22
Alignment gi|NP_666230.2| calcium-binding mitochondrial carrier protein S... 101 9e-22
Alignment gi|NP_780542.1| solute carrier family 25 member 41 [Mus musculu... 100 2e-21
>ref|NP_031477.1| ADP/ATP translocase 2 [Mus musculus].
Length = 298
Score = 568 bits (1464), Expect = e-162
Identities = 282/298 (94%), Positives = 286/298 (95%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREF+GLGDCLVKIYKSDGI+GLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
QSGRKGTDIMYTGTLDCWRKIARDEG+KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+T
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGSKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYT 298
>ref|NP_031476.3| ADP/ATP translocase 1 [Mus musculus].
Length = 298
Score = 524 bits (1349), Expect = e-149
Identities = 254/297 (85%), Positives = 270/297 (90%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
M D A+SF KDFLAGG+AAA+SKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MGDQALSFLKDFLAGGIAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGK ++REF GLGDCL KI+KSDG++GLYQGF+VS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGSSQREFNGLGDCLTKIFKSDGLKGLYQGFSVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQSVTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 989
QSGRKG DIMYTGTLDCWRKIA+DEGA AFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 QSGRKGADIMYTGTLDCWRKIAKDEGANAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 297
>ref|NP_848473.2| ADP/ATP translocase 4 [Mus musculus].
Length = 320
Score = 411 bits (1056), Expect = e-115
Identities = 200/292 (68%), Positives = 238/292 (81%)
Frame = +3
Query: 114 VSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQ 293
VSF+KD LAGGVAAA+SKTAVAPIERVKLLLQVQ +SKQI+ + +YKG++DC+VRIP+EQ
Sbjct: 19 VSFSKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMLDCLVRIPREQ 78
Query: 294 GVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXX 473
G LS+WRGNLANVIRYFPTQALNFAFKDKYK++F+ GV+K QFWR+F
Sbjct: 79 GFLSYWRGNLANVIRYFPTQALNFAFKDKYKELFMSGVNKEKQFWRWFLANLASGGAAGA 138
Query: 474 TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGII 653
TSLC VYPLDFARTRL D+GK +R+F GLGDC++KI KSDG+ GLYQGF VSVQGII
Sbjct: 139 TSLCVVYPLDFARTRLGVDIGKGPEQRQFTGLGDCIMKIAKSDGLIGLYQGFGVSVQGII 198
Query: 654 IYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRK 833
+YRA+YFG YDT KG+LP PK T +S++IAQ VT +G+ SYPFDTVRRRMMMQSG
Sbjct: 199 VYRASYFGAYDTVKGLLPKPKETPFLVSFIIAQIVTTCSGILSYPFDTVRRRMMMQSGE- 257
Query: 834 GTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 989
+D Y GT+DC+ KI R EG AFF+GA+SN+LRG GGA VLVLYD+IK+F
Sbjct: 258 -SDRQYKGTIDCFLKIYRHEGVPAFFRGAFSNILRGTGGALVLVLYDKIKEF 308
>ref|NP_766273.1| calcium-binding mitochondrial carrier protein SCaMC-1 [Mus musculus].
Length = 475
Score = 117 bits (293), Expect = 2e-26
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 6/293 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ LAGGVA A+S+T+ AP++R+K+++QV H SK + ++ ++ KE G+ S
Sbjct: 196 RQLLAGGVAGAVSRTSTAPLDRLKVMMQV-HGSKSMNIFGGFRQMV-------KEGGIRS 247
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NVI+ P A+ F ++YK++ K F R+ T+
Sbjct: 248 LWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGTFERFI-----SGSMAGATAQT 302
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
F+YP++ +TRLA V K G ++ G+ C KI K +G Y+G+ ++ GII Y
Sbjct: 303 FIYPMEVLKTRLA--VAKTG---QYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAG 357
Query: 666 AYFGIYDTAK-----GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+ K D N + + + L SYP VR RM Q+
Sbjct: 358 IDLAVYELLKSYWLDNFAKDSVNPGVMVLLSCGALSSTCGQLASYPLALVRTRMQAQATV 417
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK 986
+G + + +++I EG ++G N ++ + + V+Y+ +K+
Sbjct: 418 EGAPQL--SMVGLFQRIVSKEGVSGLYRGITPNFMKVLPAVGISYVVYENMKQ 468
Score = 57.0 bits (136), Expect = 3e-08
Identities = 45/191 (23%), Positives = 79/191 (41%)
Frame = +3
Query: 132 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFW 311
F++G +A A ++T + P+E +K L V QY GI C +I K +G +F+
Sbjct: 290 FISGSMAGATAQTFIYPMEVLKTRLAVAKTG-------QYSGIYGCAKKILKHEGFGAFY 342
Query: 312 RGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFV 491
+G + N++ P ++ A + K +L K + L
Sbjct: 343 KGYIPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLSCGALSSTCGQLAS- 401
Query: 492 YPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAY 671
YPL RTR+ A GA + + +I +G+ GLY+G + ++
Sbjct: 402 YPLALVRTRMQAQATVEGAPQ--LSMVGLFQRIVSKEGVSGLYRGITPNFMKVLPAVGIS 459
Query: 672 FGIYDTAKGML 704
+ +Y+ K L
Sbjct: 460 YVVYENMKQTL 470
>ref|NP_001007571.1| solute carrier family 25 member 42 [Mus musculus].
Length = 318
Score = 105 bits (263), Expect = 5e-23
Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Frame = +3
Query: 135 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWR 314
L+G +A A++KTAVAP++R K++ QV +SK+ +A + ++ + + +G LS WR
Sbjct: 38 LSGALAGALAKTAVAPLDRTKIIFQV--SSKRFSAKEAFRLLYFTYLN----EGFLSLWR 91
Query: 315 GNLANVIRYFPTQALNFAFKDKYKQI---FLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
GN A ++R P A+ F+ ++YK+I + G + W T+
Sbjct: 92 GNSATMVRVIPYAAIQFSAHEEYKRILGHYYGFRGEALPPW----PRLLAGALAGTTAAS 147
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
YPLD R R+A + + + ++I + +G++ LY GF +V G+I Y
Sbjct: 148 LTYPLDLVRARMAVT-----PKEMYSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAG 202
Query: 666 AYFGIYDTAKGM------LPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSG 827
F Y++ K + P P + F + + SYP D VRRRM
Sbjct: 203 LSFFTYESLKSLHREYSGRPQP---YPFERMVFGACAGLIGQSASYPLDVVRRRMQTAG- 258
Query: 828 RKGTDIMYTGTLDCWRKIARDEGA-KAFFKGAWSNVLRG 941
T + L R I R+EGA + +KG N L+G
Sbjct: 259 --VTGHQHGSILSTLRSIVREEGAVRGLYKGLSMNWLKG 295
>ref|NP_080153.2| calcium-binding mitochondrial carrier protein SCaMC-3 [Mus musculus].
Length = 467
Score = 104 bits (259), Expect = 1e-22
Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 7/294 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
K +AG VA A+S+T AP++R+K+ +QV HASK + I+ + + +E GVLS
Sbjct: 186 KQLVAGAVAGAVSRTGTAPLDRLKVFMQV-HASKSNRLN-----ILGGLRNMIQEGGVLS 239
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F ++ K+ G Q + T+
Sbjct: 240 LWRGNGINVLKIAPESAIKFMAYEQIKRAIRG-----QQETLHVQERFVAGSLAGATAQT 294
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TRL + + G +++GL DC +I + +G R Y+G+ +V GII Y
Sbjct: 295 IIYPMEVLKTRLT--LRRTG---QYKGLLDCAKRILEREGPRAFYRGYLPNVLGIIPYAG 349
Query: 666 AYFGIYDTAKG-----MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSG- 827
+Y+T K + N I + + + SYP VR RM Q+
Sbjct: 350 IDLAVYETLKNRWLQQYSHESANPGILVLLGCGTISSTCGQIASYPLALVRTRMQAQASI 409
Query: 828 RKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK 986
G + G L R I EG ++G N ++ + + V+Y+ +K+
Sbjct: 410 EGGPQVSMVGLL---RHILSQEGVWGLYRGIAPNFMKVIPAVSISYVVYENMKQ 460
Score = 64.7 bits (156), Expect = 1e-10
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
Frame = +3
Query: 36 PRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQ 215
P S +F+ + R + T + + F+AG +A A ++T + P+E +K L ++
Sbjct: 253 PESAIKFMAYEQIKRAIRGQQET---LHVQERFVAGSLAGATAQTIIYPMEVLKTRLTLR 309
Query: 216 HASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 395
QYKG++DC RI + +G +F+RG L NV+ P ++ A + K +
Sbjct: 310 RTG-------QYKGLLDCAKRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNRW 362
Query: 396 LGGVDKRTQFWRYFXXXXXXXXXXXXTSLC---FVYPLDFARTRLAADVG-KAGAEREFR 563
L + +S C YPL RTR+ A + G +
Sbjct: 363 LQQYSHESA----NPGILVLLGCGTISSTCGQIASYPLALVRTRMQAQASIEGGPQVSMV 418
Query: 564 GLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGML 704
GL L I +G+ GLY+G + +I + + +Y+ K L
Sbjct: 419 GL---LRHILSQEGVWGLYRGIAPNFMKVIPAVSISYVVYENMKQAL 462
>ref|NP_001157830.1| calcium-binding mitochondrial carrier protein SCaMC-2 isoform 3 [Mus
musculus].
Length = 501
Score = 101 bits (252), Expect = 9e-22
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ +AGG A A+S+T AP++R+K+L+QV HAS+ I+ ++ +E G S
Sbjct: 220 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV-HASR-----SNNMCIVGGFTQMIREGGAKS 273
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F ++ K+ L G D+ T +S
Sbjct: 274 LWRGNGINVLKIAPESAIKFMAYEQMKR--LVGSDQETLRIHERLVAGSLAGAIAQSS-- 329
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TR+A + K G ++ G+ DC +I +G+ Y+G+ ++ GII Y
Sbjct: 330 -IYPMEVLKTRMA--LRKTG---QYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAG 383
Query: 666 AYFGIYDTAKG-----MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+T K + + +F+ + L SYP VR RM Q+
Sbjct: 384 IDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASI 443
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 983
+G + +L +++I R EGA ++G N ++ + + V+Y+ +K
Sbjct: 444 EGAPEVTMSSL--FKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 493
Score = 62.4 bits (150), Expect = 6e-10
Identities = 50/220 (22%), Positives = 96/220 (43%)
Frame = +3
Query: 36 PRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQ 215
P S +F+ + RL+ T + + +AG +A AI+++++ P+E +K + ++
Sbjct: 287 PESAIKFMAYEQMKRLVGSDQET---LRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALR 343
Query: 216 HASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 395
QY G++DC RI ++GV +F++G + N++ P ++ A + K +
Sbjct: 344 KTG-------QYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTW 396
Query: 396 LGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGD 575
L + F L YPL RTR+ A GA +
Sbjct: 397 LQRYAVNSADPGVFVLLACGTISSTCGQLA-SYPLALVRTRMQAQASIEGAPEV--TMSS 453
Query: 576 CLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 695
+I +++G GLY+G + +I + + +Y+ K
Sbjct: 454 LFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 493
>ref|NP_001157829.1| calcium-binding mitochondrial carrier protein SCaMC-2 isoform 2 [Mus
musculus].
Length = 502
Score = 101 bits (252), Expect = 9e-22
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ +AGG A A+S+T AP++R+K+L+QV HAS+ I+ ++ +E G S
Sbjct: 221 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV-HASR-----SNNMCIVGGFTQMIREGGAKS 274
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F ++ K+ L G D+ T +S
Sbjct: 275 LWRGNGINVLKIAPESAIKFMAYEQMKR--LVGSDQETLRIHERLVAGSLAGAIAQSS-- 330
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TR+A + K G ++ G+ DC +I +G+ Y+G+ ++ GII Y
Sbjct: 331 -IYPMEVLKTRMA--LRKTG---QYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAG 384
Query: 666 AYFGIYDTAKG-----MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+T K + + +F+ + L SYP VR RM Q+
Sbjct: 385 IDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASI 444
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 983
+G + +L +++I R EGA ++G N ++ + + V+Y+ +K
Sbjct: 445 EGAPEVTMSSL--FKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 494
Score = 62.4 bits (150), Expect = 6e-10
Identities = 50/220 (22%), Positives = 96/220 (43%)
Frame = +3
Query: 36 PRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQ 215
P S +F+ + RL+ T + + +AG +A AI+++++ P+E +K + ++
Sbjct: 288 PESAIKFMAYEQMKRLVGSDQET---LRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALR 344
Query: 216 HASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 395
QY G++DC RI ++GV +F++G + N++ P ++ A + K +
Sbjct: 345 KTG-------QYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTW 397
Query: 396 LGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGD 575
L + F L YPL RTR+ A GA +
Sbjct: 398 LQRYAVNSADPGVFVLLACGTISSTCGQLA-SYPLALVRTRMQAQASIEGAPEV--TMSS 454
Query: 576 CLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 695
+I +++G GLY+G + +I + + +Y+ K
Sbjct: 455 LFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 494
>ref|NP_666230.2| calcium-binding mitochondrial carrier protein SCaMC-2 isoform 1 [Mus
musculus].
Length = 514
Score = 101 bits (252), Expect = 9e-22
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ +AGG A A+S+T AP++R+K+L+QV HAS+ I+ ++ +E G S
Sbjct: 233 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV-HASR-----SNNMCIVGGFTQMIREGGAKS 286
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F ++ K+ L G D+ T +S
Sbjct: 287 LWRGNGINVLKIAPESAIKFMAYEQMKR--LVGSDQETLRIHERLVAGSLAGAIAQSS-- 342
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TR+A + K G ++ G+ DC +I +G+ Y+G+ ++ GII Y
Sbjct: 343 -IYPMEVLKTRMA--LRKTG---QYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAG 396
Query: 666 AYFGIYDTAKG-----MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+T K + + +F+ + L SYP VR RM Q+
Sbjct: 397 IDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASI 456
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 983
+G + +L +++I R EGA ++G N ++ + + V+Y+ +K
Sbjct: 457 EGAPEVTMSSL--FKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 506
Score = 62.4 bits (150), Expect = 6e-10
Identities = 50/220 (22%), Positives = 96/220 (43%)
Frame = +3
Query: 36 PRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQ 215
P S +F+ + RL+ T + + +AG +A AI+++++ P+E +K + ++
Sbjct: 300 PESAIKFMAYEQMKRLVGSDQET---LRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALR 356
Query: 216 HASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 395
QY G++DC RI ++GV +F++G + N++ P ++ A + K +
Sbjct: 357 KTG-------QYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTW 409
Query: 396 LGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGD 575
L + F L YPL RTR+ A GA +
Sbjct: 410 LQRYAVNSADPGVFVLLACGTISSTCGQLA-SYPLALVRTRMQAQASIEGAPEV--TMSS 466
Query: 576 CLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 695
+I +++G GLY+G + +I + + +Y+ K
Sbjct: 467 LFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 506
>ref|NP_780542.1| solute carrier family 25 member 41 [Mus musculus].
Length = 312
Score = 100 bits (249), Expect = 2e-21
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 5/292 (1%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
K L+G +A A+S+T AP++R ++ +QV ++SK ++ ++ + + +E GV S
Sbjct: 31 KFLLSGAMAGAVSRTGTAPLDRARVYMQV-YSSKS-----NFRNLLSGLRSLVQEGGVRS 84
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F+ ++ K F G + F S
Sbjct: 85 LWRGNGINVLKIAPEYAIKFSVCEQSKNFFYG-----VHSSQLFQERVVAGSLAVAVSQT 139
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+ P++ +TRL +++GL DC +I + DG R LY+G+ ++ GII Y
Sbjct: 140 LINPMEVLKTRLTLRF-----TGQYKGLLDCARQILERDGTRALYRGYLPNMLGIIPYAC 194
Query: 666 AYFGIYDTAKGMLP----DPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRK 833
+Y+ + + D K+ +S T + SYP VR RM Q +
Sbjct: 195 TDLAVYELLQCLWQKLGRDMKDPSGLVSLSSVTLSTTCGQMASYPLTLVRTRMQAQDTVE 254
Query: 834 GTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGM-GGAFVLVLYDEIKK 986
G++ G +++I +G ++G +L+ + G ++Y+ +KK
Sbjct: 255 GSNPTMQGV---FKRILSQQGWPGLYRGMTPTLLKVLPAGGISYLVYEAMKK 303
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,160,159
Number of extensions: 918951
Number of successful extensions: 3251
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 3060
Number of HSP's successfully gapped: 73
Length of query: 372
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 269
Effective length of database: 12,523,851
Effective search space: 3368915919
Effective search space used: 3368915919
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007688
(1117 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001927475.1| PREDICTED: ADP/ATP translocase 2 [Sus scrofa]. 573 e-164
Alignment gi|NP_999583.1| ADP/ATP translocase 3 [Sus scrofa]. 528 e-150
Alignment gi|XP_003133393.1| PREDICTED: ADP/ATP translocase 1-like isofor... 524 e-149
Alignment gi|XP_003129255.2| PREDICTED: ADP/ATP translocase 4-like [Sus s... 216 2e-56
Alignment gi|NP_001186292.1| calcium-binding mitochondrial carrier protei... 120 2e-27
Alignment gi|NP_001157982.1| calcium-binding mitochondrial carrier protei... 103 2e-22
Alignment gi|XP_003355049.1| PREDICTED: mitochondrial folate transporter/... 99 4e-21
Alignment gi|XP_001927624.1| PREDICTED: solute carrier family 25 member 4... 97 2e-20
Alignment gi|XP_003360489.1| PREDICTED: brain mitochondrial carrier prote... 96 4e-20
Alignment gi|XP_003135426.2| PREDICTED: brain mitochondrial carrier prote... 96 4e-20
>ref|XP_001927475.1| PREDICTED: ADP/ATP translocase 2 [Sus scrofa].
Length = 298
Score = 573 bits (1476), Expect = e-164
Identities = 286/298 (95%), Positives = 286/298 (95%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 298
>ref|NP_999583.1| ADP/ATP translocase 3 [Sus scrofa].
Length = 298
Score = 528 bits (1359), Expect = e-150
Identities = 257/296 (86%), Positives = 271/296 (91%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MT+ A+SFAKDFLAGG+AAAISKTAVAPIERVKLLLQVQHASKQI ADKQYKGI+DC+VR
Sbjct: 1 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDK TQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGK+ EREF+GLGDCLVKI KSDGIRGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKSATEREFKGLGDCLVKITKSDGIRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFG+Y TAKGMLPDP+NTHI +SWMIAQ+VTAVAG+ SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYGTAKGMLPDPRNTHIVVSWMIAQTVTAVAGVFSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKK 986
QSGRKG DIMY GTLDCWRKI +DEG KAFFKGAWSNVLRGMGGAFVLVLYDE+KK
Sbjct: 241 QSGRKGADIMYKGTLDCWRKIFKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKK 296
>ref|XP_003133393.1| PREDICTED: ADP/ATP translocase 1-like isoform 2 [Sus scrofa].
Length = 298
Score = 524 bits (1349), Expect = e-149
Identities = 256/297 (86%), Positives = 270/297 (90%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
M+D A SF KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MSDQAWSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVD+ QFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGK A+REF GLG+CL KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCLAKIFKSDGLRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFG+YDTAKGMLPDPKN HI +SWMIAQ+VTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 989
QSGRKG DIMYTGT+DCWRKIA+DEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 297
>ref|XP_003129255.2| PREDICTED: ADP/ATP translocase 4-like [Sus scrofa].
Length = 173
Score = 216 bits (549), Expect = 2e-56
Identities = 105/143 (73%), Positives = 118/143 (82%)
Frame = +3
Query: 111 AVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKE 290
A SF KD LAGGVAAA+SKTAVAPIERVKLLLQVQ +SKQI+ + QYKGI+DC+VRIP+E
Sbjct: 21 AGSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEAQYKGIVDCLVRIPRE 80
Query: 291 QGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXX 470
QG S+WRGNLANVIRYFPTQALNFAFKDKYKQ+F+ GV+K QFWR+F
Sbjct: 81 QGFFSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLAAGGAAG 140
Query: 471 XTSLCFVYPLDFARTRLAADVGK 539
TSLC VYPLDFARTRL AD+GK
Sbjct: 141 ATSLCVVYPLDFARTRLGADIGK 163
>ref|NP_001186292.1| calcium-binding mitochondrial carrier protein SCaMC-1-like [Sus
scrofa].
Length = 477
Score = 120 bits (300), Expect = 2e-27
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 6/293 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ LAGGVA A+S+T+ AP++R+K+++QV H SK + I ++ KE G+ S
Sbjct: 196 RQLLAGGVAGAVSRTSTAPLDRLKVMMQV-HGSK-----SEKMNIYGGFRQMVKEGGIRS 249
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NVI+ P A+ F ++YK++ K F R+ T+
Sbjct: 250 LWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKVGTFERFI-----SGSMAGATAQT 304
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
F+YP++ +TRLA VGK G ++ G+ DC KI K +G+ Y+G+ ++ GII Y
Sbjct: 305 FIYPMEVLKTRLA--VGKTG---QYSGIFDCAKKILKHEGMGAFYKGYVPNLLGIIPYAG 359
Query: 666 AYFGIYDTAK-----GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+ K D N + + + L SYP VR RM Q+
Sbjct: 360 IDLAVYELLKSHWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRMQAQAMV 419
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK 986
+G + + +R+I EG ++G N ++ + + V+Y+ +K+
Sbjct: 420 EGAPQL--NMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYENMKQ 470
Score = 58.5 bits (140), Expect = 6e-09
Identities = 47/191 (24%), Positives = 81/191 (42%)
Frame = +3
Query: 132 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFW 311
F++G +A A ++T + P+E +K L V QY GI DC +I K +G+ +F+
Sbjct: 292 FISGSMAGATAQTFIYPMEVLKTRLAVGKTG-------QYSGIFDCAKKILKHEGMGAFY 344
Query: 312 RGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFV 491
+G + N++ P ++ A + K +L K + L
Sbjct: 345 KGYVPNLLGIIPYAGIDLAVYELLKSHWLDNFAKDSVNPGVMVLLGCGALSSTCGQLAS- 403
Query: 492 YPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAY 671
YPL RTR+ A GA + + +I +GI GLY+G + ++
Sbjct: 404 YPLALVRTRMQAQAMVEGAPQ--LNMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGIS 461
Query: 672 FGIYDTAKGML 704
+ +Y+ K L
Sbjct: 462 YVVYENMKQTL 472
>ref|NP_001157982.1| calcium-binding mitochondrial carrier protein SCaMC-2 [Sus scrofa].
Length = 501
Score = 103 bits (257), Expect = 2e-22
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ +AGG A A+S+T AP++R+K+L+QV HAS+ I+ ++ +E G S
Sbjct: 220 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV-HASR-----SNNMCIVGGFTQMIREGGARS 273
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F ++ K+ L G D+ T +S
Sbjct: 274 LWRGNGINVLKIAPESAIKFMAYEQIKR--LVGTDQETLRIHERLVAGSLAGAIAQSS-- 329
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TR+A + K G ++ G+ DC KI +G+ Y+G+ ++ GII Y
Sbjct: 330 -IYPMEVLKTRMA--LRKTG---QYSGMLDCARKILAREGVAAFYKGYVPNMLGIIPYAG 383
Query: 666 AYFGIYDTAKG-----MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+T K + + +F+ + L SYP VR RM Q+
Sbjct: 384 IDLAVYETLKNAWLQRYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASV 443
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 983
+G + +L +++I R EGA ++G N ++ + + V+Y+ +K
Sbjct: 444 EGAPEVSMSSL--FKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 493
Score = 62.4 bits (150), Expect = 4e-10
Identities = 49/220 (22%), Positives = 95/220 (43%)
Frame = +3
Query: 36 PRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQ 215
P S +F+ + RL+ T + + +AG +A AI+++++ P+E +K + ++
Sbjct: 287 PESAIKFMAYEQIKRLVGTDQET---LRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALR 343
Query: 216 HASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 395
QY G++DC +I +GV +F++G + N++ P ++ A + K +
Sbjct: 344 KTG-------QYSGMLDCARKILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAW 396
Query: 396 LGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGD 575
L + F L YPL RTR+ A GA +
Sbjct: 397 LQRYAVNSADPGVFVLLACGTMSSTCGQLA-SYPLALVRTRMQAQASVEGAPEV--SMSS 453
Query: 576 CLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 695
+I +++G GLY+G + +I + + +Y+ K
Sbjct: 454 LFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 493
>ref|XP_003355049.1| PREDICTED: mitochondrial folate transporter/carrier [Sus scrofa].
Length = 315
Score = 99.0 bits (245), Expect = 4e-21
Identities = 86/299 (28%), Positives = 135/299 (45%), Gaps = 11/299 (3%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
++ +AG +S A+ P++ VK+ V S + +YKGI+ C+ I K G+
Sbjct: 24 ENLVAGVSGGVLSNLALHPLDLVKIRFAV---SDGLELRPKYKGILHCLTTIWKLDGLRG 80
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
++G NV + L F F + K G +R + Y +LC
Sbjct: 81 LYQGVTPNVWGAGLSWGLYFFFYNAIKSYKTEGRAERLEAAEYLISAAEAGAM----TLC 136
Query: 486 FVYPLDFARTRLAADVGKA--GAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIY 659
PL +TRL ++R+++G+ D LVKIYK +G+RGLY+GF + G +
Sbjct: 137 ITNPLWVTKTRLMLQYEGVVTASQRQYKGMFDALVKIYKYEGVRGLYKGFIPGLFG-TSH 195
Query: 660 RAAYFGIYDTAK-------GMLPDPK-NTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMM 815
A F Y+ K LP+ + NT +IS + AVA +YP+ VR R+
Sbjct: 196 GALQFMTYELLKLKYNQHINRLPEAQLNTVEYISVAALSKIFAVA--ATYPYQVVRARLQ 253
Query: 816 MQSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIKKF 989
Q + Y+G LD K R EG F+KG N++R + V+Y+ + F
Sbjct: 254 DQ------HMFYSGVLDVITKTWRKEGISGFYKGIAPNLIRVTPACCITFVVYENVSHF 306
>ref|XP_001927624.1| PREDICTED: solute carrier family 25 member 43 [Sus scrofa].
Length = 341
Score = 96.7 bits (239), Expect = 2e-20
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 5/283 (1%)
Frame = +3
Query: 105 DAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIP 284
D ++ ++ L G+A A+S + AP+E +L QV + +G +R+
Sbjct: 7 DGRLTGSQRLLCAGLAGALSLSLTAPLELATVLAQVG------VVRGRARGPWAAGLRVW 60
Query: 285 KEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXX 464
+ +G + W+GN +R FP A+ A K+ +F + +Q WR
Sbjct: 61 RAEGPRALWKGNAVACLRLFPCSAVQLAAYRKFVVLFTDDLGHISQ-WR----SVMAGSL 115
Query: 465 XXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQ 644
S YP D +TRL + + E +RG+ IY+ +G+ Y+G +++V
Sbjct: 116 AGMVSTVVTYPTDLIKTRL---IVQNMLEPSYRGIFHAFSTIYQQEGLLAFYRGVSLTVL 172
Query: 645 GIIIYRAAYFGIYDTAKGMLPDPKNTHIFI-SWMIAQSVTAVAGLTSYPFDTVRRRMMMQ 821
G + + +Y + + P++ + ++ AV S+PFDTV+R+M Q
Sbjct: 173 GALPFSVGSLLVYMNLEKIWNGPRDRFSLLQNFANICLAAAVTQTLSFPFDTVKRKMQAQ 232
Query: 822 SGRK----GTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLR 938
S G D+ ++G +DC+R+I + +G + G +N+L+
Sbjct: 233 SPYLPHGGGVDVHFSGAVDCFRQIVKAQGVLGLWNGLAANLLK 275
Score = 55.5 bits (132), Expect = 5e-08
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 4/198 (2%)
Frame = +3
Query: 114 VSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQ 293
+S + +AG +A +S P + +K L VQ+ + Y+GI I +++
Sbjct: 104 ISQWRSVMAGSLAGMVSTVVTYPTDLIKTRLIVQNM-----LEPSYRGIFHAFSTIYQQE 158
Query: 294 GVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXX 473
G+L+F+RG V+ P + ++I+ G D+ + +
Sbjct: 159 GLLAFYRGVSLTVLGALPFSVGSLLVYMNLEKIWNGPRDRFSLLQNF-----ANICLAAA 213
Query: 474 TSLCFVYPLDFARTRLAADVGK----AGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSV 641
+ +P D + ++ A G + F G DC +I K+ G+ GL+ G ++
Sbjct: 214 VTQTLSFPFDTVKRKMQAQSPYLPHGGGVDVHFSGAVDCFRQIVKAQGVLGLWNGLAANL 273
Query: 642 QGIIIYRAAYFGIYDTAK 695
I+ Y FG ++ K
Sbjct: 274 LKIVPYFGVMFGTFEFCK 291
>ref|XP_003360489.1| PREDICTED: brain mitochondrial carrier protein 1-like isoform 2
[Sus scrofa].
Length = 325
Score = 95.9 bits (237), Expect = 4e-20
Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 8/295 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADK-QYKGIIDCVVRIPKEQGVL 302
K F+ GG+A+ +++ P++ K LQVQ S + + +Y+G+ + RI KE+GVL
Sbjct: 42 KPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVL 101
Query: 303 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSL 482
+ + G ++R + K++F+ ++ T S
Sbjct: 102 ALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDET-----LLINMICGVVSGVISS 156
Query: 483 CFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYR 662
P D + R+ A G+ + +G + IY+ +G RGL++G + Q I
Sbjct: 157 TIANPTDVLKIRMQAQ----GSLFQGSMIGS-FIDIYQQEGTRGLWRGVVPTAQRAAIVV 211
Query: 663 AAYFGIYDTAK------GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQS 824
+YD K G+L D TH S+ + L S P D VR RMM Q
Sbjct: 212 GVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLA----GALASNPVDVVRTRMMNQR 267
Query: 825 GRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLR-GMGGAFVLVLYDEIKK 986
G +Y GTLD K+ + EG A +KG W N LR G + Y+++K+
Sbjct: 268 AIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 322
>ref|XP_003135426.2| PREDICTED: brain mitochondrial carrier protein 1-like isoform 1
[Sus scrofa].
Length = 325
Score = 95.9 bits (237), Expect = 4e-20
Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 8/295 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADK-QYKGIIDCVVRIPKEQGVL 302
K F+ GG+A+ +++ P++ K LQVQ S + + +Y+G+ + RI KE+GVL
Sbjct: 42 KPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVL 101
Query: 303 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSL 482
+ + G ++R + K++F+ ++ T S
Sbjct: 102 ALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDET-----LLINMICGVVSGVISS 156
Query: 483 CFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYR 662
P D + R+ A G+ + +G + IY+ +G RGL++G + Q I
Sbjct: 157 TIANPTDVLKIRMQAQ----GSLFQGSMIGS-FIDIYQQEGTRGLWRGVVPTAQRAAIVV 211
Query: 663 AAYFGIYDTAK------GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQS 824
+YD K G+L D TH S+ + L S P D VR RMM Q
Sbjct: 212 GVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLA----GALASNPVDVVRTRMMNQR 267
Query: 825 GRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLR-GMGGAFVLVLYDEIKK 986
G +Y GTLD K+ + EG A +KG W N LR G + Y+++K+
Sbjct: 268 AIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKR 322
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,687,398
Number of extensions: 682201
Number of successful extensions: 2514
Number of sequences better than 1.0e-05: 41
Number of HSP's gapped: 2373
Number of HSP's successfully gapped: 53
Length of query: 372
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 272
Effective length of database: 8,854,232
Effective search space: 2408351104
Effective search space used: 2408351104
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007688
(1117 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001143.2| ADP/ATP translocase 2 [Homo sapiens]. 562 e-160
Alignment gi|NP_001627.2| ADP/ATP translocase 3 [Homo sapiens]. 536 e-152
Alignment gi|NP_001142.2| ADP/ATP translocase 1 [Homo sapiens]. 529 e-150
Alignment gi|NP_112581.1| ADP/ATP translocase 4 [Homo sapiens]. 409 e-114
Alignment gi|NP_998816.1| calcium-binding mitochondrial carrier protein S... 122 6e-28
Alignment gi|NP_037518.3| calcium-binding mitochondrial carrier protein S... 122 6e-28
Alignment gi|NP_848621.2| solute carrier family 25 member 42 [Homo sapien... 104 1e-22
Alignment gi|NP_001006643.1| calcium-binding mitochondrial carrier protei... 104 2e-22
Alignment gi|NP_001006644.1| calcium-binding mitochondrial carrier protei... 104 2e-22
Alignment gi|NP_001006642.1| calcium-binding mitochondrial carrier protei... 104 2e-22
>ref|NP_001143.2| ADP/ATP translocase 2 [Homo sapiens].
Length = 298
Score = 562 bits (1449), Expect = e-160
Identities = 280/298 (93%), Positives = 283/298 (94%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
Sbjct: 1 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFW YF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWLYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGI+GLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFGIYDTAKGMLPDPKNTHI ISWMIAQ+VTAVAGLTSYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFT 992
QSGRKGTDIMYTGTLDCWRKIARDEG KAFFKGAWSNVLRGMGGAFVLVLYDEIKK+T
Sbjct: 241 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYT 298
>ref|NP_001627.2| ADP/ATP translocase 3 [Homo sapiens].
Length = 298
Score = 536 bits (1381), Expect = e-152
Identities = 261/296 (88%), Positives = 274/296 (92%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
MT+ A+SFAKDFLAGG+AAAISKTAVAPIERVKLLLQVQHASKQI ADKQYKGI+DC+VR
Sbjct: 1 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDK TQFWRYF
Sbjct: 61 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGK+G EREFRGLGDCLVKI KSDGIRGLYQGF+VS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFG+YDTAKGMLPDPKNTHI +SWMIAQ+VTAVAG+ SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKK 986
QSGRKG DIMYTGT+DCWRKI RDEG KAFFKGAWSNVLRGMGGAFVLVLYDE+KK
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKK 296
>ref|NP_001142.2| ADP/ATP translocase 1 [Homo sapiens].
Length = 298
Score = 529 bits (1363), Expect = e-150
Identities = 257/297 (86%), Positives = 272/297 (91%)
Frame = +3
Query: 99 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR 278
M D A SF KDFLAGGVAAA+SKTAVAPIERVKLLLQVQHASKQI+A+KQYKGIIDCVVR
Sbjct: 1 MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR 60
Query: 279 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXX 458
IPKEQG LSFWRGNLANVIRYFPTQALNFAFKDKYKQ+FLGGVD+ QFWRYF
Sbjct: 61 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASG 120
Query: 459 XXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVS 638
TSLCFVYPLDFARTRLAADVGK A+REF GLGDC++KI+KSDG+RGLYQGFNVS
Sbjct: 121 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVS 180
Query: 639 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMM 818
VQGIIIYRAAYFG+YDTAKGMLPDPKN HIF+SWMIAQSVTAVAGL SYPFDTVRRRMMM
Sbjct: 181 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMM 240
Query: 819 QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 989
QSGRKG DIMYTGT+DCWRKIA+DEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKK+
Sbjct: 241 QSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKY 297
>ref|NP_112581.1| ADP/ATP translocase 4 [Homo sapiens].
Length = 315
Score = 409 bits (1052), Expect = e-114
Identities = 202/293 (68%), Positives = 234/293 (79%)
Frame = +3
Query: 111 AVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKE 290
A SF KD LAGGVAAA+SKTAVAPIERVKLLLQVQ +SKQI+ + +YKG++DC+VRIP+E
Sbjct: 17 ASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMVDCLVRIPRE 76
Query: 291 QGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXX 470
QG SFWRGNLANVIRYFPTQALNFAFKDKYKQ+F+ GV+K QFWR+F
Sbjct: 77 QGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAG 136
Query: 471 XTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGI 650
TSLC VYPLDFARTRL D+GK ER+F+GLGDC++KI KSDGI GLYQGF VSVQGI
Sbjct: 137 ATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGI 196
Query: 651 IIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
I+YRA+YFG YDT KG+LP PK T +S+ IAQ VT +G+ SYPFDTVRRRMMMQSG
Sbjct: 197 IVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGE 256
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 989
Y GTLDC+ KI + EG +FF+GA+SNVLRG GGA VLVLYD+IK+F
Sbjct: 257 --AKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVLYDKIKEF 307
>ref|NP_998816.1| calcium-binding mitochondrial carrier protein SCaMC-1 isoform 2 [Homo
sapiens].
Length = 458
Score = 122 bits (306), Expect = 6e-28
Identities = 87/293 (29%), Positives = 145/293 (49%), Gaps = 6/293 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ LAGG+A A+S+T+ AP++R+K+++QV H SK +DK I ++ KE G+ S
Sbjct: 177 RQLLAGGIAGAVSRTSTAPLDRLKIMMQV-HGSK---SDKM--NIFGGFRQMVKEGGIRS 230
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NVI+ P A+ F ++YK++ K F R+ T+
Sbjct: 231 LWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFI-----SGSMAGATAQT 285
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
F+YP++ +TRLA VGK G ++ G+ DC KI K +G+ Y+G+ ++ GII Y
Sbjct: 286 FIYPMEVMKTRLA--VGKTG---QYSGIYDCAKKILKHEGLGAFYKGYVPNLLGIIPYAG 340
Query: 666 AYFGIYDTAK-----GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+ K D N + + + L SYP VR RM Q+
Sbjct: 341 IDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRMQAQAML 400
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK 986
+G+ + + +R+I EG ++G N ++ + + V+Y+ +K+
Sbjct: 401 EGSPQL--NMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYENMKQ 451
Score = 57.8 bits (138), Expect = 2e-08
Identities = 46/191 (24%), Positives = 81/191 (42%)
Frame = +3
Query: 132 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFW 311
F++G +A A ++T + P+E +K L V QY GI DC +I K +G+ +F+
Sbjct: 273 FISGSMAGATAQTFIYPMEVMKTRLAVGKTG-------QYSGIYDCAKKILKHEGLGAFY 325
Query: 312 RGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFV 491
+G + N++ P ++ A + K +L K + L
Sbjct: 326 KGYVPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLAS- 384
Query: 492 YPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAY 671
YPL RTR+ A G+ + + +I +GI GLY+G + ++
Sbjct: 385 YPLALVRTRMQAQAMLEGSPQ--LNMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGIS 442
Query: 672 FGIYDTAKGML 704
+ +Y+ K L
Sbjct: 443 YVVYENMKQTL 453
>ref|NP_037518.3| calcium-binding mitochondrial carrier protein SCaMC-1 isoform 1 [Homo
sapiens].
Length = 477
Score = 122 bits (306), Expect = 6e-28
Identities = 87/293 (29%), Positives = 145/293 (49%), Gaps = 6/293 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ LAGG+A A+S+T+ AP++R+K+++QV H SK +DK I ++ KE G+ S
Sbjct: 196 RQLLAGGIAGAVSRTSTAPLDRLKIMMQV-HGSK---SDKM--NIFGGFRQMVKEGGIRS 249
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NVI+ P A+ F ++YK++ K F R+ T+
Sbjct: 250 LWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGTFERFI-----SGSMAGATAQT 304
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
F+YP++ +TRLA VGK G ++ G+ DC KI K +G+ Y+G+ ++ GII Y
Sbjct: 305 FIYPMEVMKTRLA--VGKTG---QYSGIYDCAKKILKHEGLGAFYKGYVPNLLGIIPYAG 359
Query: 666 AYFGIYDTAK-----GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+ K D N + + + L SYP VR RM Q+
Sbjct: 360 IDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRMQAQAML 419
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK 986
+G+ + + +R+I EG ++G N ++ + + V+Y+ +K+
Sbjct: 420 EGSPQL--NMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYENMKQ 470
Score = 57.8 bits (138), Expect = 2e-08
Identities = 46/191 (24%), Positives = 81/191 (42%)
Frame = +3
Query: 132 FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFW 311
F++G +A A ++T + P+E +K L V QY GI DC +I K +G+ +F+
Sbjct: 292 FISGSMAGATAQTFIYPMEVMKTRLAVGKTG-------QYSGIYDCAKKILKHEGLGAFY 344
Query: 312 RGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFV 491
+G + N++ P ++ A + K +L K + L
Sbjct: 345 KGYVPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLAS- 403
Query: 492 YPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAY 671
YPL RTR+ A G+ + + +I +GI GLY+G + ++
Sbjct: 404 YPLALVRTRMQAQAMLEGSPQ--LNMVGLFRRIISKEGIPGLYRGITPNFMKVLPAVGIS 461
Query: 672 FGIYDTAKGML 704
+ +Y+ K L
Sbjct: 462 YVVYENMKQTL 472
>ref|NP_848621.2| solute carrier family 25 member 42 [Homo sapiens].
Length = 318
Score = 104 bits (260), Expect = 1e-22
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 8/277 (2%)
Frame = +3
Query: 135 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWR 314
L+G +A A++KTAVAP++R K++ QV +SK+ +A + ++ + + +G LS WR
Sbjct: 38 LSGALAGALAKTAVAPLDRTKIIFQV--SSKRFSAKEAFRVLYYTYLN----EGFLSLWR 91
Query: 315 GNLANVIRYFPTQALNFAFKDKYKQI---FLGGVDKRTQFW-RYFXXXXXXXXXXXXTSL 482
GN A ++R P A+ F+ ++YK+I + G + W R F T+
Sbjct: 92 GNSATMVRVVPYAAIQFSAHEEYKRILGSYYGFRGEALPPWPRLF-----AGALAGTTAA 146
Query: 483 CFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYR 662
YPLD R R+A + + + ++I + +G++ LY GF +V G+I Y
Sbjct: 147 SLTYPLDLVRARMAVT-----PKEMYSNIFHVFIRISREEGLKTLYHGFMPTVLGVIPYA 201
Query: 663 AAYFGIYDTAKGM---LPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRK 833
F Y+T K + + + F + + SYP D VRRRM
Sbjct: 202 GLSFFTYETLKSLHREYSGRRQPYPFERMIFGACAGLIGQSASYPLDVVRRRMQTAGVTG 261
Query: 834 GTDIMYTGTLDCWRKIARDEGA-KAFFKGAWSNVLRG 941
TL R I R+EGA + +KG N ++G
Sbjct: 262 YPRASIARTL---RTIVREEGAVRGLYKGLSMNWVKG 295
>ref|NP_001006643.1| calcium-binding mitochondrial carrier protein SCaMC-2 isoform c [Homo
sapiens].
Length = 489
Score = 104 bits (259), Expect = 2e-22
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ +AGG A A+S+T AP++R+K+L+QV HAS+ GI+ ++ +E G S
Sbjct: 208 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV-HASR-----SNNMGIVGGFTQMIREGGARS 261
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F ++ K+ L G D+ T +S
Sbjct: 262 LWRGNGINVLKIAPESAIKFMAYEQIKR--LVGSDQETLRIHERLVAGSLAGAIAQSS-- 317
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TR+A + K G ++ G+ DC +I +G+ Y+G+ ++ GII Y
Sbjct: 318 -IYPMEVLKTRMA--LRKTG---QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAG 371
Query: 666 AYFGIYDTAKG-----MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+T K + + +F+ + L SYP VR RM Q+
Sbjct: 372 IDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASI 431
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 983
+G + +L ++ I R EGA ++G N ++ + + V+Y+ +K
Sbjct: 432 EGAPEVTMSSL--FKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 481
Score = 61.6 bits (148), Expect = 1e-09
Identities = 50/220 (22%), Positives = 94/220 (42%)
Frame = +3
Query: 36 PRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQ 215
P S +F+ + RL+ T + + +AG +A AI+++++ P+E +K + ++
Sbjct: 275 PESAIKFMAYEQIKRLVGSDQET---LRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALR 331
Query: 216 HASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 395
QY G++DC RI +GV +F++G + N++ P ++ A + K +
Sbjct: 332 KTG-------QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAW 384
Query: 396 LGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGD 575
L + F L YPL RTR+ A GA +
Sbjct: 385 LQHYAVNSADPGVFVLLACGTMSSTCGQLA-SYPLALVRTRMQAQASIEGAPEV--TMSS 441
Query: 576 CLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 695
I +++G GLY+G + +I + + +Y+ K
Sbjct: 442 LFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 481
>ref|NP_001006644.1| calcium-binding mitochondrial carrier protein SCaMC-2 isoform d
[Homo sapiens].
Length = 366
Score = 104 bits (259), Expect = 2e-22
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ +AGG A A+S+T AP++R+K+L+QV HAS+ GI+ ++ +E G S
Sbjct: 85 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV-HASR-----SNNMGIVGGFTQMIREGGARS 138
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F ++ K+ L G D+ T +S
Sbjct: 139 LWRGNGINVLKIAPESAIKFMAYEQIKR--LVGSDQETLRIHERLVAGSLAGAIAQSS-- 194
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TR+A + K G ++ G+ DC +I +G+ Y+G+ ++ GII Y
Sbjct: 195 -IYPMEVLKTRMA--LRKTG---QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAG 248
Query: 666 AYFGIYDTAKG-----MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+T K + + +F+ + L SYP VR RM Q+
Sbjct: 249 IDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASI 308
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 983
+G + +L ++ I R EGA ++G N ++ + + V+Y+ +K
Sbjct: 309 EGAPEVTMSSL--FKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 358
Score = 61.6 bits (148), Expect = 1e-09
Identities = 50/220 (22%), Positives = 94/220 (42%)
Frame = +3
Query: 36 PRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQ 215
P S +F+ + RL+ T + + +AG +A AI+++++ P+E +K + ++
Sbjct: 152 PESAIKFMAYEQIKRLVGSDQET---LRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALR 208
Query: 216 HASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 395
QY G++DC RI +GV +F++G + N++ P ++ A + K +
Sbjct: 209 KTG-------QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAW 261
Query: 396 LGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGD 575
L + F L YPL RTR+ A GA +
Sbjct: 262 LQHYAVNSADPGVFVLLACGTMSSTCGQLA-SYPLALVRTRMQAQASIEGAPEV--TMSS 318
Query: 576 CLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 695
I +++G GLY+G + +I + + +Y+ K
Sbjct: 319 LFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 358
>ref|NP_001006642.1| calcium-binding mitochondrial carrier protein SCaMC-2 isoform b [Homo
sapiens].
Length = 503
Score = 104 bits (259), Expect = 2e-22
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Frame = +3
Query: 126 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLS 305
+ +AGG A A+S+T AP++R+K+L+QV HAS+ GI+ ++ +E G S
Sbjct: 222 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV-HASR-----SNNMGIVGGFTQMIREGGARS 275
Query: 306 FWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFXXXXXXXXXXXXTSLC 485
WRGN NV++ P A+ F ++ K+ L G D+ T +S
Sbjct: 276 LWRGNGINVLKIAPESAIKFMAYEQIKR--LVGSDQETLRIHERLVAGSLAGAIAQSS-- 331
Query: 486 FVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRA 665
+YP++ +TR+A + K G ++ G+ DC +I +G+ Y+G+ ++ GII Y
Sbjct: 332 -IYPMEVLKTRMA--LRKTG---QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAG 385
Query: 666 AYFGIYDTAKG-----MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGR 830
+Y+T K + + +F+ + L SYP VR RM Q+
Sbjct: 386 IDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASI 445
Query: 831 KGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFV-LVLYDEIK 983
+G + +L ++ I R EGA ++G N ++ + + V+Y+ +K
Sbjct: 446 EGAPEVTMSSL--FKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 495
Score = 61.6 bits (148), Expect = 1e-09
Identities = 50/220 (22%), Positives = 94/220 (42%)
Frame = +3
Query: 36 PRSPSRFLTVPAVARLLFPSNMTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQ 215
P S +F+ + RL+ T + + +AG +A AI+++++ P+E +K + ++
Sbjct: 289 PESAIKFMAYEQIKRLVGSDQET---LRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALR 345
Query: 216 HASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF 395
QY G++DC RI +GV +F++G + N++ P ++ A + K +
Sbjct: 346 KTG-------QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAW 398
Query: 396 LGGVDKRTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKAGAEREFRGLGD 575
L + F L YPL RTR+ A GA +
Sbjct: 399 LQHYAVNSADPGVFVLLACGTMSSTCGQLA-SYPLALVRTRMQAQASIEGAPEV--TMSS 455
Query: 576 CLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK 695
I +++G GLY+G + +I + + +Y+ K
Sbjct: 456 LFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLK 495
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,378,587
Number of extensions: 1083659
Number of successful extensions: 3854
Number of sequences better than 1.0e-05: 58
Number of HSP's gapped: 3619
Number of HSP's successfully gapped: 97
Length of query: 372
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 268
Effective length of database: 14,868,908
Effective search space: 3984867344
Effective search space used: 3984867344
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007688
(1117 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_ChrX 973 0.0
gb|GL896347.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 210 1e-51
Sscrofa_Chr15 155 6e-35
Sscrofa_Chr08 68 1e-08
>Sscrofa_ChrX
|| Length = 144288218
Score = 973 bits (491), Expect = 0.0
Identities = 491/491 (100%)
Strand = Plus / Minus
Query: 207 caggtgcagcatgccagcaagcaaatcactgcagataagcaatacaagggcatcatagac 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744957 caggtgcagcatgccagcaagcaaatcactgcagataagcaatacaagggcatcatagac 113744898
Query: 267 tgcgtggttcgtatccccaaggagcagggagtcctgtccttctggcgtggtaacctggcc 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744897 tgcgtggttcgtatccccaaggagcagggagtcctgtccttctggcgtggtaacctggcc 113744838
Query: 327 aatgtcatcagatacttccccacgcaggctctcaactttgcgttcaaagataaatacaag 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744837 aatgtcatcagatacttccccacgcaggctctcaactttgcgttcaaagataaatacaag 113744778
Query: 387 cagatcttcctgggcggtgtggacaagaggacccagttttggcgctactttgcagggaat 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744777 cagatcttcctgggcggtgtggacaagaggacccagttttggcgctactttgcagggaat 113744718
Query: 447 ctggcctcaggtggtgctgctggggccacatccttgtgttttgtgtaccctctcgacttt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744717 ctggcctcaggtggtgctgctggggccacatccttgtgttttgtgtaccctctcgacttt 113744658
Query: 507 gcccgtactcgtctagccgctgatgtgggcaaagctggagctgaaagggaattcagaggc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744657 gcccgtactcgtctagccgctgatgtgggcaaagctggagctgaaagggaattcagaggc 113744598
Query: 567 ctcggcgactgcctggttaagatctacaaatctgacgggattaggggcctgtaccaaggc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744597 ctcggcgactgcctggttaagatctacaaatctgacgggattaggggcctgtaccaaggc 113744538
Query: 627 tttaacgtgtctgtgcagggtattatcatctaccgagctgcctacttcggtatctatgac 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744537 tttaacgtgtctgtgcagggtattatcatctaccgagctgcctacttcggtatctatgac 113744478
Query: 687 accgcaaaggg 697
|||||||||||
Sbjct: 113744477 accgcaaaggg 113744467
Score = 496 bits (250), Expect = e-137
Identities = 274/278 (98%), Gaps = 3/278 (1%)
Strand = Plus / Minus
Query: 838 ctgatatcatgtacacaggcacgcttgactgctggaggaagattgctcgtgacgaaggag 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113743718 ctgatatcatgtacacaggcacgcttgactgctggaggaagattgctcgtgacgaaggag 113743659
Query: 898 ccaaagcctttttcaagggcgcctggtccaatgtcctcagaggcatgggtggtgcttttg 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113743658 ccaaagcctttttcaagggcgcctggtccaatgtcctcagaggcatgggtggtgcttttg 113743599
Query: 958 tgcttgtcttgtatgatgaaatcaagaagttcacataagttatttcctagtttttctccc 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113743598 tgcttgtcttgtatgatgaaatcaagaagttcacataagttatttcctagtttttctccc 113743539
Query: 1018 tcagtgaacaggcatgttgtattatat-acatatcttgagcattcctggcaaactg-tgg 1075
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||
Sbjct: 113743538 tcagtgaacaggcatgttgtattatataacatatcttgagcattcctggcagactgttgg 113743479
Query: 1076 ctgtctatttatc-atggcaactatgtactggttgaaa 1112
||||||||||||| ||||||||||||||||||||||||
Sbjct: 113743478 ctgtctatttatcaatggcaactatgtactggttgaaa 113743441
Score = 418 bits (211), Expect = e-114
Identities = 211/211 (100%)
Strand = Plus / Minus
Query: 1 tataaatcggccatttgcttcgctccgccccgcagcctcggagtccaagccggttcctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113746205 tataaatcggccatttgcttcgctccgccccgcagcctcggagtccaagccggttcctta 113746146
Query: 61 ccgttcccgcagtcgcccgcctcctctttccttccaacatgacagatgctgccgtgtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113746145 ccgttcccgcagtcgcccgcctcctctttccttccaacatgacagatgctgccgtgtcct 113746086
Query: 121 tcgccaaggacttcctggcaggtggagtagccgcggccatctccaagactgccgtagcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113746085 tcgccaaggacttcctggcaggtggagtagccgcggccatctccaagactgccgtagcgc 113746026
Query: 181 ccatcgagcgggtcaagctgctgctgcaggt 211
|||||||||||||||||||||||||||||||
Sbjct: 113746025 ccatcgagcgggtcaagctgctgctgcaggt 113745995
Score = 281 bits (142), Expect = 4e-73
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 696 ggaatgcttccagatcccaagaatactcatatcttcatcagctggatgatcgctcagtcc 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744215 ggaatgcttccagatcccaagaatactcatatcttcatcagctggatgatcgctcagtcc 113744156
Query: 756 gtcaccgcagttgctgggttgacttcctatccgtttgacactgtacgtcgacgcatgatg 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113744155 gtcaccgcagttgctgggttgacttcctatccgtttgacactgtacgtcgacgcatgatg 113744096
Query: 816 atgcagtcaggacgcaaaggaa 837
||||||||||||||||||||||
Sbjct: 113744095 atgcagtcaggacgcaaaggaa 113744074
>gb|GL896347.1| Sus scrofa unplaced genomic scaffold chrU_scaffold697
Length = 12539
Score = 210 bits (106), Expect = 1e-51
Identities = 379/470 (80%)
Strand = Plus / Plus
Query: 207 caggtgcagcatgccagcaagcaaatcactgcagataagcaatacaagggcatcatagac 266
||||||||||| ||||||||||| ||| | || || ||||| |||||||||||| | |||
Sbjct: 4277 caggtgcagcacgccagcaagcagatcgcggccgacaagcagtacaagggcatcgtggac 4336
Query: 267 tgcgtggttcgtatccccaaggagcagggagtcctgtccttctggcgtggtaacctggcc 326
||| | || || ||||||||||||||||| || |||||||||||| | || |||||||||
Sbjct: 4337 tgcatcgtgcgcatccccaaggagcagggcgtgctgtccttctggaggggcaacctggcc 4396
Query: 327 aatgtcatcagatacttccccacgcaggctctcaactttgcgttcaaagataaatacaag 386
||||||||| | |||||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 4397 aatgtcatccgctacttccccacgcaagccctcaacttcgccttcaaggataagtacaag 4456
Query: 387 cagatcttcctgggcggtgtggacaagaggacccagttttggcgctactttgcagggaat 446
||||| ||||||||||| ||||||||| || ||||| ||| | || || || || ||
Sbjct: 4457 cagattttcctgggcggcgtggacaagcacacgcagttctggaggtatttcgccggcaac 4516
Query: 447 ctggcctcaggtggtgctgctggggccacatccttgtgttttgtgtaccctctcgacttt 506
|||||||| || || || || || ||||| ||| | || || || ||||| || || ||
Sbjct: 4517 ctggcctccggcggcgcggccggcgccacctccctctgcttcgtctaccccctggatttc 4576
Query: 507 gcccgtactcgtctagccgctgatgtgggcaaagctggagctgaaagggaattcagaggc 566
||||| || || || || || || ||||| ||| | | | || |||| |||| ||||
Sbjct: 4577 gcccgaacccgcctggctgccgacgtggggaaatccgccaccgagcgggagttcaaaggc 4636
Query: 567 ctcggcgactgcctggttaagatctacaaatctgacgggattaggggcctgtaccaaggc 626
|| |||||||| ||||| |||||| ||| |||||||| || |||| |||||||| |||
Sbjct: 4637 ctgggcgactgtctggtgaagatcaccaagtctgacggcatccgggggctgtaccagggc 4696
Query: 627 tttaacgtgtctgtgcagggtattatcatctaccgagctgcctacttcgg 676
|| |||||||| |||||||| || ||||||||||| || |||||||||||
Sbjct: 4697 ttcaacgtgtcggtgcagggaatcatcatctaccgggcggcctacttcgg 4746
>Sscrofa_Chr15
|| Length = 157681621
Score = 155 bits (78), Expect = 6e-35
Identities = 246/302 (81%)
Strand = Plus / Plus
Query: 207 caggtgcagcatgccagcaagcaaatcactgcagataagcaatacaagggcatcatagac 266
||||| |||||||||||||| || |||| ||| || ||||| ||||| || ||||| ||
Sbjct: 52923996 caggtccagcatgccagcaaacagatcagtgctgagaagcagtacaaagggatcattgat 52924055
Query: 267 tgcgtggttcgtatccccaaggagcagggagtcctgtccttctggcgtggtaacctggcc 326
|||||||| | ||||||||||||||||| | || ||||||||| | ||||||||||||
Sbjct: 52924056 tgcgtggtgagaatccccaaggagcagggctttctctccttctggaggggtaacctggcc 52924115
Query: 327 aatgtcatcagatacttccccacgcaggctctcaactttgcgttcaaagataaatacaag 386
|| || ||| | ||||| ||||| || ||||||||||| || ||||| || || ||||||
Sbjct: 52924116 aacgtgatccgttactttcccacccaagctctcaacttcgccttcaaggacaagtacaag 52924175
Query: 387 cagatcttcctgggcggtgtggacaagaggacccagttttggcgctactttgcagggaat 446
|||||||||||||| || |||||| | | ||||| |||||||||||||| || ||
Sbjct: 52924176 cagatcttcctggggggcgtggaccggcataagcagttctggcgctactttgctggtaac 52924235
Query: 447 ctggcctcaggtggtgctgctggggccacatccttgtgttttgtgtaccctctcgacttt 506
||||| || ||||| || ||||||||||| ||| | || ||||| ||||| || ||||||
Sbjct: 52924236 ctggcttccggtggggcagctggggccacctccctctgctttgtctacccgctggacttt 52924295
Query: 507 gc 508
||
Sbjct: 52924296 gc 52924297
Score = 77.8 bits (39), Expect = 1e-11
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 126 aaggacttcctggcaggtggagtagccgcggccatctccaagactgccgtagcgcccatc 185
||||||||| |||| || || || ||||| |||||||||||||| || || || ||||||
Sbjct: 52922645 aaggacttcttggctggcggcgtcgccgctgccatctccaagaccgcggtcgcccccatc 52922704
Query: 186 gagcgggtcaagctgctgctgcaggtg 212
||| ||||||| |||||||||||||||
Sbjct: 52922705 gagagggtcaaactgctgctgcaggtg 52922731
>Sscrofa_Chr08
|| Length = 148491826
Score = 67.9 bits (34), Expect = 1e-08
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 126 aaggacttcctggcaggtggagtagccgcggccatctccaagactgccgtagcgcccatc 185
|||||||| || |||||||| || || ||||| | |||||||| || || |||||||||
Sbjct: 103983740 aaggacttgctcgcaggtggggtggcagcggctgtgtccaagacggcggtggcgcccatc 103983681
Query: 186 gagcgggtcaagctgctgctgcaggtgcag 215
|||||||| ||| |||||||||| ||||||
Sbjct: 103983680 gagcgggtgaagttgctgctgcaagtgcag 103983651
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,177,491
Number of extensions: 184
Number of successful extensions: 184
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 182
Number of HSP's successfully gapped: 9
Length of query: 1117
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1096
Effective length of database: 2,808,413,156
Effective search space: 3078020818976
Effective search space used: 3078020818976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)