Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007719
(1482 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001033208.1| GMP reductase 2 [Bos taurus]. 684 0.0
Alignment gi|NP_001069445.1| GMP reductase 1 [Bos taurus]. 574 e-164
Alignment gi|NP_001029588.1| inosine-5'-monophosphate dehydrogenase 2 [Bo... 125 1e-28
Alignment gi|XP_002690582.1| PREDICTED: GMP reductase 1-like [Bos taurus]. 120 2e-27
Alignment gi|NP_001071309.1| inosine-5'-monophosphate dehydrogenase 1 [Bo... 119 7e-27
>ref|NP_001033208.1| GMP reductase 2 [Bos taurus].
Length = 348
Score = 684 bits (1766), Expect = 0.0
Identities = 339/348 (97%), Positives = 345/348 (99%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSF+FRNSKQMYTGIPIIAANMDTVGT
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFAFRNSKQMYTGIPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQIL+AI
Sbjct: 61 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILNAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKY+CLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQVKYVCLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIERNG+KYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKG
Sbjct: 241 LGGMLAGHSESGGELIERNGRKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 1255
VEHTIRDI+GGIRSTCTYVGAAK KELSRRTTFIRVTQQV PIFSDES
Sbjct: 301 VEHTIRDIIGGIRSTCTYVGAAKQKELSRRTTFIRVTQQVKPIFSDES 348
>ref|NP_001069445.1| GMP reductase 1 [Bos taurus].
Length = 345
Score = 574 bits (1479), Expect = e-164
Identities = 277/345 (80%), Positives = 314/345 (91%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MP ID D+KLDFKDVLLRPKRS+LKSR+EVDL R+F+FRNSKQ Y+GIPII ANMDTVGT
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMA V+ + S+FTA+HKHY+L+ WK FA+ +P+CL+H+A SSG+G D E++ IL+A+
Sbjct: 61 FEMAVVMSQHSMFTAIHKHYTLDDWKLFAANHPECLQHVAVSSGSGKDDLEKMSNILEAV 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVK+ICLDVANGYSEHFVEFVK VR RFPEHTIMAGNVVTGEMVEELILSGADIIKVG+
Sbjct: 121 PQVKFICLDVANGYSEHFVEFVKLVRSRFPEHTIMAGNVVTGEMVEELILSGADIIKVGV 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTR KTGVGYPQLSAV+ECAD+AHGLKGHIISDGGC+CPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGM +GH+E GE+IERNG+K KLFYGMSSE AMKK++GGVAEYRA EGKTVEVP+KG
Sbjct: 241 LGGMFSGHTECAGEVIERNGQKLKLFYGMSSETAMKKHSGGVAEYRAPEGKTVEVPYKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS 1246
VE+TI DILGG+RSTCTYVGAAKLKELSRR TFIRVTQQ N +FS
Sbjct: 301 VENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVFS 345
>ref|NP_001029588.1| inosine-5'-monophosphate dehydrogenase 2 [Bos taurus].
Length = 514
Score = 125 bits (313), Expect = 1e-28
Identities = 85/322 (26%), Positives = 156/322 (48%), Gaps = 7/322 (2%)
Frame = +2
Query: 248 KDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKFSL 427
+D+++ P TLK +E+ L RS + +PI+ N + V
Sbjct: 183 EDLVVAPAGITLKEANEI-LQRSKKGK--------LPIVNENDELV-------------- 219
Query: 428 FTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVAN 607
A+ L++ +++ + D + L + G+ + ++ L + V + LD +
Sbjct: 220 --AIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLSQAGVDVVVLDSSQ 277
Query: 608 GYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKT 787
G S + +K +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 278 GNSIFQINMIKYIKEKYPSIQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVL 337
Query: 788 GVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESG 967
G PQ +AV + ++ A +I+DGG G +AKA GA VM+G +LA +E+
Sbjct: 338 ACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAP 397
Query: 968 GELIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTI 1126
GE +G + K + GM S AM K+ Y + +G + V KG++ +
Sbjct: 398 GEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFV 457
Query: 1127 RDILGGIRSTCTYVGAAKLKEL 1192
++ GI+ +C +GA L ++
Sbjct: 458 PYLIAGIQHSCQDIGAKSLTQV 479
>ref|XP_002690582.1| PREDICTED: GMP reductase 1-like [Bos taurus].
Length = 68
Score = 120 bits (302), Expect = 2e-27
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +2
Query: 1070 ATEGKTVEVPFKGAVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSD 1249
A+EGKTVEVPFKG VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSD
Sbjct: 7 ASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSD 66
Query: 1250 ES 1255
ES
Sbjct: 67 ES 68
>ref|NP_001071309.1| inosine-5'-monophosphate dehydrogenase 1 [Bos taurus].
Length = 571
Score = 119 bits (298), Expect = 7e-27
Identities = 74/234 (31%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Frame = +2
Query: 512 ASSGTGSSDFEQLEQILDAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVV 691
A+ GT D +L+ + A V I LD + G S + + V +++++P ++ GNVV
Sbjct: 305 AAVGTREDDKYRLDLLTQAGADV--IVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVV 362
Query: 692 TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDG 871
T + LI +G D ++VG+G GS+C T++ G PQ +AV + A+ A +I+DG
Sbjct: 363 TAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPVIADG 422
Query: 872 GCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAG 1051
G G V KA GA VM+G +LA +E+ GE +G + K + GM S AM+K +
Sbjct: 423 GIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSS 482
Query: 1052 GVAEY-------RATEGKTVEVPFKGAVEHTIRDILGGIRSTCTYVGAAKLKEL 1192
Y + +G + + KG+++ + ++ GI+ C +GA L L
Sbjct: 483 SQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVL 536
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 61,996,844
Number of extensions: 1849048
Number of successful extensions: 7793
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 7609
Number of HSP's successfully gapped: 5
Length of query: 494
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 388
Effective length of database: 14,174,046
Effective search space: 5499529848
Effective search space used: 5499529848
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007719
(1482 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_850127.1| PREDICTED: similar to GMP reductase 2 (Guanosin... 686 0.0
Alignment gi|XP_860697.1| PREDICTED: similar to GMP reductase 2 (Guanosin... 612 e-175
Alignment gi|XP_860663.1| PREDICTED: similar to GMP reductase 2 (Guanosin... 600 e-172
Alignment gi|XP_545353.2| PREDICTED: similar to guanosine monophosphate r... 573 e-163
Alignment gi|XP_858369.1| PREDICTED: similar to guanosine monophosphate r... 565 e-161
Alignment gi|XP_860565.1| PREDICTED: similar to GMP reductase 2 (Guanosin... 556 e-158
Alignment gi|XP_537390.2| PREDICTED: similar to GMP reductase 2 (Guanosin... 432 e-121
Alignment gi|XP_860631.1| PREDICTED: similar to guanosine monophosphate r... 135 8e-32
Alignment gi|XP_862874.1| PREDICTED: similar to Inosine-5-monophosphate d... 124 2e-28
Alignment gi|XP_533835.2| PREDICTED: similar to inosine 5-phosphate dehyd... 124 2e-28
>ref|XP_850127.1| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 3 [Canis familiaris].
Length = 348
Score = 686 bits (1770), Expect = 0.0
Identities = 340/348 (97%), Positives = 347/348 (99%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHID+D+KLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ+YTGIPIIAANMDTVGT
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCKFSLFTAVHKHYSL+QWKEFASQNPDCLEHLAASSGTGSSDFEQLEQIL+AI
Sbjct: 61 FEMAKVLCKFSLFTAVHKHYSLQQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILEAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIER+GKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKG
Sbjct: 241 LGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 1255
VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES
Sbjct: 301 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 348
>ref|XP_860697.1| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 7 [Canis familiaris].
Length = 320
Score = 612 bits (1578), Expect = e-175
Identities = 313/348 (89%), Positives = 319/348 (91%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHID+D+KLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ+YTGIPIIAANMDTVGT
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCK HLAASSGTGSSDFEQLEQIL+AI
Sbjct: 61 FEMAKVLCK----------------------------HLAASSGTGSSDFEQLEQILEAI 92
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 93 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 152
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 153 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 212
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIER+GKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKG
Sbjct: 213 LGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGD 272
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 1255
VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES
Sbjct: 273 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 320
>ref|XP_860663.1| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 6 [Canis familiaris].
Length = 315
Score = 600 bits (1548), Expect = e-172
Identities = 307/348 (88%), Positives = 314/348 (90%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHID+D+KLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ+YTGIPIIAANMDTVGT
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCKFSLFTAVHKHYSL+QWKEFASQNPDCLEHLAASSGTGSSDFEQLEQIL+AI
Sbjct: 61 FEMAKVLCKFSLFTAVHKHYSLQQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILEAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQ AGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQ---------------------------------AGNVVTGEMVEELILSGADIIKVGI 147
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 148 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 207
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIER+GKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKG
Sbjct: 208 LGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGD 267
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 1255
VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES
Sbjct: 268 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 315
>ref|XP_545353.2| PREDICTED: similar to guanosine monophosphate reductase isoform 1
[Canis familiaris].
Length = 345
Score = 573 bits (1477), Expect = e-163
Identities = 277/345 (80%), Positives = 316/345 (91%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MP ID D+KLDFKDVLLRPKRS+L+SR+EVDL R+F+FRNSKQ Y+GIPII ANMDTVGT
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLRSRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMA V+ + S+FTAVHKHY+L+ WK FA+ +P+CL+H+A SSG+G SD E++ IL+A+
Sbjct: 61 FEMAVVMSQHSMFTAVHKHYTLDDWKLFAAHHPECLQHVAVSSGSGKSDLEKMSGILEAV 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVK+ICLDVANGYSEHFVEFVK VR +FPEHTIMAGNVVTGEMVEELILSGADIIKVG+
Sbjct: 121 PQVKFICLDVANGYSEHFVEFVKLVRAKFPEHTIMAGNVVTGEMVEELILSGADIIKVGV 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTR KTGVGYPQLSAV+ECAD+AHGLKGHIISDGGC+CPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGM +GH+E GE+IE+NG+K KLFYGMSSE AMKK+AGGVAEYRA+EGKTVEVP+KG
Sbjct: 241 LGGMFSGHTECAGEVIEKNGQKLKLFYGMSSETAMKKHAGGVAEYRASEGKTVEVPYKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS 1246
VE+TI DILGG+RSTCTYVGAAKLKELSRR TFIRVTQQ N +FS
Sbjct: 301 VENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVFS 345
>ref|XP_858369.1| PREDICTED: similar to guanosine monophosphate reductase isoform 2
[Canis familiaris].
Length = 355
Score = 565 bits (1456), Expect = e-161
Identities = 277/355 (78%), Positives = 316/355 (89%), Gaps = 10/355 (2%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV----------DLTRSFSFRNSKQMYTGIPI 361
MP ID D+KLDFKDVLLRPKRS+L+SR+EV DL R+F+FRNSKQ Y+GIPI
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLRSRAEVGTSESRSAPVDLERTFTFRNSKQTYSGIPI 60
Query: 362 IAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDF 541
I ANMDTVGTFEMA V+ + S+FTAVHKHY+L+ WK FA+ +P+CL+H+A SSG+G SD
Sbjct: 61 IVANMDTVGTFEMAVVMSQHSMFTAVHKHYTLDDWKLFAAHHPECLQHVAVSSGSGKSDL 120
Query: 542 EQLEQILDAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELIL 721
E++ IL+A+PQVK+ICLDVANGYSEHFVEFVK VR +FPEHTIMAGNVVTGEMVEELIL
Sbjct: 121 EKMSGILEAVPQVKFICLDVANGYSEHFVEFVKLVRAKFPEHTIMAGNVVTGEMVEELIL 180
Query: 722 SGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAK 901
SGADIIKVG+GPGSVCTTR KTGVGYPQLSAV+ECAD+AHGLKGHIISDGGC+CPGDVAK
Sbjct: 181 SGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAK 240
Query: 902 AFGAGADFVMLGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEG 1081
AFGAGADFVMLGGM +GH+E GE+IE+NG+K KLFYGMSSE AMKK+AGGVAEYRA+EG
Sbjct: 241 AFGAGADFVMLGGMFSGHTECAGEVIEKNGQKLKLFYGMSSETAMKKHAGGVAEYRASEG 300
Query: 1082 KTVEVPFKGAVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS 1246
KTVEVP+KG VE+TI DILGG+RSTCTYVGAAKLKELSRR TFIRVTQQ N +FS
Sbjct: 301 KTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVFS 355
>ref|XP_860565.1| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 4 [Canis familiaris].
Length = 296
Score = 556 bits (1434), Expect = e-158
Identities = 275/280 (98%), Positives = 279/280 (99%)
Frame = +2
Query: 416 KFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICL 595
KFSLFTAVHKHYSL+QWKEFASQNPDCLEHLAASSGTGSSDFEQLEQIL+AIPQVKYICL
Sbjct: 17 KFSLFTAVHKHYSLQQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICL 76
Query: 596 DVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTT 775
DVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTT
Sbjct: 77 DVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTT 136
Query: 776 RKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGH 955
RKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGH
Sbjct: 137 RKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGH 196
Query: 956 SESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGAVEHTIRDI 1135
SESGGELIER+GKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKG VEHTIRDI
Sbjct: 197 SESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDI 256
Query: 1136 LGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 1255
LGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES
Sbjct: 257 LGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 296
>ref|XP_537390.2| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 1 [Canis familiaris].
Length = 242
Score = 432 bits (1112), Expect = e-121
Identities = 213/218 (97%), Positives = 218/218 (100%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHID+D+KLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ+YTGIPIIAANMDTVGT
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCKFSLFTAVHKHYSL+QWKEFASQNPDCLEHLAASSGTGSSDFEQLEQIL+AI
Sbjct: 61 FEMAKVLCKFSLFTAVHKHYSLQQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILEAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIIS 865
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIIS
Sbjct: 181 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIIS 218
>ref|XP_860631.1| PREDICTED: similar to guanosine monophosphate reductase 2 isoform 5
[Canis familiaris].
Length = 83
Score = 135 bits (341), Expect = 8e-32
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHID+D+KLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ+YTGIPIIAANMDTVGT
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGT 60
Query: 392 FEMAKVLCK 418
FEMAKVLCK
Sbjct: 61 FEMAKVLCK 69
>ref|XP_862874.1| PREDICTED: similar to Inosine-5-monophosphate dehydrogenase 2 (IMP
dehydrogenase 2) (IMPDH-II) (IMPD 2) isoform 8 [Canis
familiaris].
Length = 541
Score = 124 bits (311), Expect = 2e-28
Identities = 73/260 (28%), Positives = 133/260 (51%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L A V + LD + G
Sbjct: 247 AIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLAQAGVDVVVLDSSQGN 306
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + +K +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 307 SIFQINMIKYIKEKYPTLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVLAC 366
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + ++ A +I+DGG G +AKA GA VM+G +LA +E+ GE
Sbjct: 367 GRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGE 426
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM K+ Y + +G + V KG++ +
Sbjct: 427 YFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFVPY 486
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ +C +GA L ++
Sbjct: 487 LIAGIQHSCQDIGAKSLTQV 506
>ref|XP_533835.2| PREDICTED: similar to inosine 5-phosphate dehydrogenase 2 isoform 1
[Canis familiaris].
Length = 526
Score = 124 bits (311), Expect = 2e-28
Identities = 73/260 (28%), Positives = 133/260 (51%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L A V + LD + G
Sbjct: 232 AIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLAQAGVDVVVLDSSQGN 291
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + +K +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 292 SIFQINMIKYIKEKYPTLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVLAC 351
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + ++ A +I+DGG G +AKA GA VM+G +LA +E+ GE
Sbjct: 352 GRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGE 411
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM K+ Y + +G + V KG++ +
Sbjct: 412 YFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFVPY 471
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ +C +GA L ++
Sbjct: 472 LIAGIQHSCQDIGAKSLTQV 491
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 64,578,108
Number of extensions: 1893703
Number of successful extensions: 7796
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 7615
Number of HSP's successfully gapped: 18
Length of query: 494
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 387
Effective length of database: 15,307,552
Effective search space: 5924022624
Effective search space used: 5924022624
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007719
(1482 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_818773.1| GMP reductase 2 [Mus musculus]. 665 0.0
Alignment gi|NP_079784.1| GMP reductase 1 [Mus musculus]. 573 e-163
Alignment gi|NP_035960.2| inosine-5'-monophosphate dehydrogenase 2 [Mus m... 128 1e-29
Alignment gi|XP_001478203.2| PREDICTED: inosine-5'-monophosphate dehydrog... 127 2e-29
Alignment gi|NP_035959.2| inosine-5'-monophosphate dehydrogenase 1 [Mus m... 119 6e-27
>ref|NP_818773.1| GMP reductase 2 [Mus musculus].
Length = 348
Score = 665 bits (1715), Expect = 0.0
Identities = 327/346 (94%), Positives = 342/346 (98%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV+LTRSFSFRNSKQMY+GIP+IAANMDTVGT
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVELTRSFSFRNSKQMYSGIPVIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMA+VLCKFSLFTA+HKHYS+ QW+EFASQNPDCLE LAASSG+GS+DFEQLEQIL+AI
Sbjct: 61 FEMARVLCKFSLFTAIHKHYSIHQWQEFASQNPDCLECLAASSGSGSADFEQLEQILEAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKYICLDVANGYSEHFVEFVKDVRKRFP+HTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGI 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIER+GKKYKLFYGMSSEMAMKKY+GGVAEYRA+EGK VEVPFKG
Sbjct: 241 LGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYSGGVAEYRASEGKIVEVPFKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSD 1249
VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS+
Sbjct: 301 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSN 346
>ref|NP_079784.1| GMP reductase 1 [Mus musculus].
Length = 345
Score = 573 bits (1477), Expect = e-163
Identities = 277/344 (80%), Positives = 315/344 (91%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MP ID D+KLDFKDVLLRPKRS+LKSRSEVDL R+F+FRNSKQ Y+GIPII ANMDTVGT
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRSEVDLERTFTFRNSKQTYSGIPIIVANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMA V+ + ++FTAVHKHYSL+ WK FA +P+CL+H+A SSG+G +D E++ +IL+A+
Sbjct: 61 FEMAVVMSQHAMFTAVHKHYSLDDWKCFAETHPECLQHVAVSSGSGQNDLERMSRILEAV 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVK+ICLDVANGYSEHFVEFVK VR +FPEHTIMAGNVVTGEMVEELILSGADIIKVG+
Sbjct: 121 PQVKFICLDVANGYSEHFVEFVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGV 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTR KTGVGYPQLSAV+ECAD+AHGLKGHIISDGGC+CPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGM +GH+E GE+IERNG+K KLFYGMSS+ AMKK+AGGVAEYRA+EGKTVEVP+KG
Sbjct: 241 LGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAGGVAEYRASEGKTVEVPYKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIF 1243
VE+TI DILGG+RSTCTYVGAAKLKELSRR TFIRVTQQ N +F
Sbjct: 301 VENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVF 344
>ref|NP_035960.2| inosine-5'-monophosphate dehydrogenase 2 [Mus musculus].
Length = 514
Score = 128 bits (321), Expect = 1e-29
Identities = 86/322 (26%), Positives = 157/322 (48%), Gaps = 7/322 (2%)
Frame = +2
Query: 248 KDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKFSL 427
+D+++ P TLK +E+ L RS + +PI+ N + V
Sbjct: 183 EDLVVAPAGVTLKEANEI-LQRSKKGK--------LPIVNENDELV-------------- 219
Query: 428 FTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVAN 607
A+ L++ +++ + D + L + G+ + ++ L A+ V + LD +
Sbjct: 220 --AIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLALAGVDVVVLDSSQ 277
Query: 608 GYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKT 787
G S + +K +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 278 GNSIFQINMIKYIKEKYPSLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVL 337
Query: 788 GVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESG 967
G PQ +AV + ++ A +I+DGG G +AKA GA VM+G +LA +E+
Sbjct: 338 ACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAP 397
Query: 968 GELIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTI 1126
GE +G + K + GM S AM K+ Y + +G + V KG++ +
Sbjct: 398 GEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFV 457
Query: 1127 RDILGGIRSTCTYVGAAKLKEL 1192
++ GI+ +C +GA L ++
Sbjct: 458 PYLIAGIQHSCQDIGAKSLTQV 479
>ref|XP_001478203.2| PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Mus
musculus].
Length = 544
Score = 127 bits (320), Expect = 2e-29
Identities = 86/322 (26%), Positives = 157/322 (48%), Gaps = 7/322 (2%)
Frame = +2
Query: 248 KDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKFSL 427
+D+++ P TLK +E+ L RS + +PI+ N + V
Sbjct: 213 EDLVVAPAGVTLKEANEI-LQRSKKGK--------LPIVNENDELV-------------- 249
Query: 428 FTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVAN 607
A+ L++ +++ + D + L + G+ + ++ L A+ V + LD +
Sbjct: 250 --AIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLALAGVDVVVLDSSQ 307
Query: 608 GYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKT 787
G S + +K +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 308 GNSIFQINMIKYIKEKYPSLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVL 367
Query: 788 GVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESG 967
G PQ +AV + ++ A +I+DGG G +AKA GA VM+G +LA +E+
Sbjct: 368 ACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALAFGASTVMMGSLLAATTEAP 427
Query: 968 GELIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTI 1126
GE +G + K + GM S AM K+ Y + +G + V KG++ +
Sbjct: 428 GEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFV 487
Query: 1127 RDILGGIRSTCTYVGAAKLKEL 1192
++ GI+ +C +GA L ++
Sbjct: 488 PYLIAGIQHSCQDIGAKSLTQV 509
>ref|NP_035959.2| inosine-5'-monophosphate dehydrogenase 1 [Mus musculus].
Length = 514
Score = 119 bits (298), Expect = 6e-27
Identities = 74/234 (31%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Frame = +2
Query: 512 ASSGTGSSDFEQLEQILDAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVV 691
A+ GT D +L+ + A V I LD + G S + + V +++++P ++ GNVV
Sbjct: 248 AAVGTREDDKYRLDLLTQAGADV--IVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVV 305
Query: 692 TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDG 871
T + LI +G D ++VG+G GS+C T++ G PQ +AV + A+ A +I+DG
Sbjct: 306 TAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPVIADG 365
Query: 872 GCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAG 1051
G G V KA GA VM+G +LA +E+ GE +G + K + GM S AM+K +
Sbjct: 366 GIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSS 425
Query: 1052 GVAEY-------RATEGKTVEVPFKGAVEHTIRDILGGIRSTCTYVGAAKLKEL 1192
Y + +G + + KG+++ + ++ GI+ C +GA L L
Sbjct: 426 SQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGAQSLSVL 479
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 53,813,589
Number of extensions: 1576952
Number of successful extensions: 6277
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 6165
Number of HSP's successfully gapped: 5
Length of query: 494
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 389
Effective length of database: 12,463,779
Effective search space: 4848410031
Effective search space used: 4848410031
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007719
(1482 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001928049.1| PREDICTED: hypothetical protein LOC100154068... 697 0.0
Alignment gi|XP_001929155.2| PREDICTED: LOW QUALITY PROTEIN: GMP reductas... 541 e-154
Alignment gi|XP_003358476.1| PREDICTED: inosine-5'-monophosphate dehydrog... 124 1e-28
Alignment gi|XP_003132249.2| PREDICTED: inosine-5'-monophosphate dehydrog... 124 1e-28
Alignment gi|XP_003360194.1| PREDICTED: inosine-5'-monophosphate dehydrog... 119 4e-27
>ref|XP_001928049.1| PREDICTED: hypothetical protein LOC100154068 [Sus scrofa].
Length = 348
Score = 697 bits (1798), Expect = 0.0
Identities = 347/348 (99%), Positives = 348/348 (100%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI
Sbjct: 61 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKGA
Sbjct: 241 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGA 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 1255
VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES
Sbjct: 301 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSDES 348
>ref|XP_001929155.2| PREDICTED: LOW QUALITY PROTEIN: GMP reductase 1 [Sus scrofa].
Length = 343
Score = 541 bits (1395), Expect = e-154
Identities = 266/345 (77%), Positives = 306/345 (88%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MP ID D+KLDFKDVLLRPKRS+LKSR+EVDL R+F+FRNSKQ Y+GIPII ANMDTVGT
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMA V+ + S+FTA+HKHY+L+ WK FA+ +P+CL+H+A SSG+G +D E++ IL+A+
Sbjct: 61 FEMAVVMSQHSMFTAIHKHYTLDDWKLFAANHPECLQHVAVSSGSGKNDLEKMSSILEAV 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVK+ICLDVANGYSEHFVEFVK VR +FPEHTIMAGNVVTGEMVEELILSGADIIKVG+
Sbjct: 121 PQVKFICLDVANGYSEHFVEFVKLVRAKFPEHTIMAGNVVTGEMVEELILSGADIIKVGV 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTR KTGVGYPQLSAV+ECAD+AHGLKGHIISDGGC+CPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGM +GH+E GE+IERNG+K KLFYGMSSE AMKK++GGVAEYRA+EGKTVEVP+KG
Sbjct: 241 LGGMFSGHTECAGEVIERNGQKLKLFYGMSSETAMKKHSGGVAEYRASEGKTVEVPYKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS 1246
VE T LGG+RSTCT G +ELSRR TFIRVTQQ N +FS
Sbjct: 301 VE-TRFXYLGGLRSTCTTXG-PPTQELSRRATFIRVTQQHNTVFS 343
>ref|XP_003358476.1| PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like isoform 2
[Sus scrofa].
Length = 489
Score = 124 bits (312), Expect = 1e-28
Identities = 73/260 (28%), Positives = 133/260 (51%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L A V + LD + G
Sbjct: 195 AIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLAQAGVDVVVLDSSQGN 254
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + +K +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 255 SIFQINMIKYIKEKYPSLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVLAC 314
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + ++ A +I+DGG G +AKA GA VM+G +LA +E+ GE
Sbjct: 315 GRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGE 374
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM K+ Y + +G + V KG++ +
Sbjct: 375 YFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFVPY 434
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ +C +GA L ++
Sbjct: 435 LIAGIQHSCQDIGAKSLTQV 454
>ref|XP_003132249.2| PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like isoform 1
[Sus scrofa].
Length = 514
Score = 124 bits (312), Expect = 1e-28
Identities = 73/260 (28%), Positives = 133/260 (51%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L A V + LD + G
Sbjct: 220 AIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLAQAGVDVVVLDSSQGN 279
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + +K +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 280 SIFQINMIKYIKEKYPSLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVLAC 339
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + ++ A +I+DGG G +AKA GA VM+G +LA +E+ GE
Sbjct: 340 GRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGE 399
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM K+ Y + +G + V KG++ +
Sbjct: 400 YFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFVPY 459
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ +C +GA L ++
Sbjct: 460 LIAGIQHSCQDIGAKSLTQV 479
>ref|XP_003360194.1| PREDICTED: inosine-5'-monophosphate dehydrogenase 1-like [Sus
scrofa].
Length = 584
Score = 119 bits (298), Expect = 4e-27
Identities = 74/234 (31%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Frame = +2
Query: 512 ASSGTGSSDFEQLEQILDAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVV 691
A+ GT D +L+ + A V I LD + G S + + V +++++P ++ GNVV
Sbjct: 318 AAVGTREDDKYRLDLLTQAGADV--IVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVV 375
Query: 692 TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDG 871
T + LI +G D ++VG+G GS+C T++ G PQ +AV + A+ A +I+DG
Sbjct: 376 TAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPVIADG 435
Query: 872 GCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAG 1051
G G V KA GA VM+G +LA +E+ GE +G + K + GM S AM+K +
Sbjct: 436 GIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSS 495
Query: 1052 GVAEY-------RATEGKTVEVPFKGAVEHTIRDILGGIRSTCTYVGAAKLKEL 1192
Y + +G + + KG+++ + ++ GI+ C +GA L L
Sbjct: 496 SQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVL 549
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 39,948,629
Number of extensions: 1186074
Number of successful extensions: 4916
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4812
Number of HSP's successfully gapped: 5
Length of query: 494
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 391
Effective length of database: 8,779,541
Effective search space: 3432800531
Effective search space used: 3432800531
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007719
(1482 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_057660.2| GMP reductase 2 isoform 1 [Homo sapiens]. 679 0.0
Alignment gi|NP_001002002.1| GMP reductase 2 isoform 2 [Homo sapiens]. 675 0.0
Alignment gi|NP_001002001.1| GMP reductase 2 isoform 2 [Homo sapiens]. 675 0.0
Alignment gi|NP_001002000.1| GMP reductase 2 isoform 2 [Homo sapiens]. 675 0.0
Alignment gi|NP_006868.3| GMP reductase 1 [Homo sapiens]. 569 e-162
Alignment gi|NP_000875.2| inosine-5'-monophosphate dehydrogenase 2 [Homo ... 124 3e-28
Alignment gi|NP_001096075.1| inosine-5'-monophosphate dehydrogenase 1 iso... 120 2e-27
Alignment gi|NP_899066.1| inosine-5'-monophosphate dehydrogenase 1 isofor... 120 2e-27
Alignment gi|NP_000874.2| inosine-5'-monophosphate dehydrogenase 1 isofor... 120 2e-27
Alignment gi|NP_001136048.1| inosine-5'-monophosphate dehydrogenase 1 iso... 120 2e-27
>ref|NP_057660.2| GMP reductase 2 isoform 1 [Homo sapiens].
Length = 366
Score = 679 bits (1752), Expect = 0.0
Identities = 336/351 (95%), Positives = 345/351 (98%)
Frame = +2
Query: 197 PEVPAMPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANM 376
P + AMPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ Y+G+PIIAANM
Sbjct: 14 PRLSAMPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANM 73
Query: 377 DTVGTFEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQ 556
DTVGTFEMAKVLCKFSLFTAVHKHYSL QW+EFA QNPDCLEHLAASSGTGSSDFEQLEQ
Sbjct: 74 DTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQ 133
Query: 557 ILDAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADI 736
IL+AIPQVKYICLDVANGYSEHFVEFVKDVRKRFP+HTIMAGNVVTGEMVEELILSGADI
Sbjct: 134 ILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADI 193
Query: 737 IKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAG 916
IKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAG
Sbjct: 194 IKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAG 253
Query: 917 ADFVMLGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEV 1096
ADFVMLGGMLAGHSESGGELIER+GKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEV
Sbjct: 254 ADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEV 313
Query: 1097 PFKGAVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSD 1249
PFKG VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS+
Sbjct: 314 PFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSE 364
>ref|NP_001002002.1| GMP reductase 2 isoform 2 [Homo sapiens].
Length = 348
Score = 675 bits (1741), Expect = 0.0
Identities = 334/346 (96%), Positives = 342/346 (98%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ Y+G+PIIAANMDTVGT
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCKFSLFTAVHKHYSL QW+EFA QNPDCLEHLAASSGTGSSDFEQLEQIL+AI
Sbjct: 61 FEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKYICLDVANGYSEHFVEFVKDVRKRFP+HTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGI 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIER+GKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKG
Sbjct: 241 LGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSD 1249
VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS+
Sbjct: 301 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSE 346
>ref|NP_001002001.1| GMP reductase 2 isoform 2 [Homo sapiens].
Length = 348
Score = 675 bits (1741), Expect = 0.0
Identities = 334/346 (96%), Positives = 342/346 (98%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ Y+G+PIIAANMDTVGT
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCKFSLFTAVHKHYSL QW+EFA QNPDCLEHLAASSGTGSSDFEQLEQIL+AI
Sbjct: 61 FEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKYICLDVANGYSEHFVEFVKDVRKRFP+HTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGI 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIER+GKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKG
Sbjct: 241 LGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSD 1249
VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS+
Sbjct: 301 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSE 346
>ref|NP_001002000.1| GMP reductase 2 isoform 2 [Homo sapiens].
Length = 348
Score = 675 bits (1741), Expect = 0.0
Identities = 334/346 (96%), Positives = 342/346 (98%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQ Y+G+PIIAANMDTVGT
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMAKVLCKFSLFTAVHKHYSL QW+EFA QNPDCLEHLAASSGTGSSDFEQLEQIL+AI
Sbjct: 61 FEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAI 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVKYICLDVANGYSEHFVEFVKDVRKRFP+HTIMAGNVVTGEMVEELILSGADIIKVGI
Sbjct: 121 PQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGI 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGMLAGHSESGGELIER+GKKYKLFYGMSSEMAMKKYAGGVAEYRA+EGKTVEVPFKG
Sbjct: 241 LGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSD 1249
VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS+
Sbjct: 301 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSE 346
>ref|NP_006868.3| GMP reductase 1 [Homo sapiens].
Length = 345
Score = 569 bits (1466), Expect = e-162
Identities = 274/345 (79%), Positives = 314/345 (91%)
Frame = +2
Query: 212 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQMYTGIPIIAANMDTVGT 391
MP ID D+KLDFKDVLLRPKRS+LKSR+EVDL R+F+FRNSKQ Y+GIPII ANMDTVGT
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGT 60
Query: 392 FEMAKVLCKFSLFTAVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAI 571
FEMA V+ + S+FTA+HKHYSL+ WK FA+ +P+CL+++A SSG+G +D E++ IL+A+
Sbjct: 61 FEMAAVMSQHSMFTAIHKHYSLDDWKLFATNHPECLQNVAVSSGSGQNDLEKMTSILEAV 120
Query: 572 PQVKYICLDVANGYSEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGI 751
PQVK+ICLDVANGYSEHFVEFVK VR +FPEHTIMAGNVVTGEMVEELILSGADIIKVG+
Sbjct: 121 PQVKFICLDVANGYSEHFVEFVKLVRAKFPEHTIMAGNVVTGEMVEELILSGADIIKVGV 180
Query: 752 GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVM 931
GPGSVCTTR KTGVGYPQLSAV+ECAD+AHGLKGHIISDGGC+CPGDVAKAFGAGADFVM
Sbjct: 181 GPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGCTCPGDVAKAFGAGADFVM 240
Query: 932 LGGMLAGHSESGGELIERNGKKYKLFYGMSSEMAMKKYAGGVAEYRATEGKTVEVPFKGA 1111
LGGM +GH+E GE+ ERNG+K KLFYGMSS+ AM K+AGGVAEYRA+EGKTVEVP+KG
Sbjct: 241 LGGMFSGHTECAGEVFERNGRKLKLFYGMSSDTAMNKHAGGVAEYRASEGKTVEVPYKGD 300
Query: 1112 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFS 1246
VE+TI DILGG+RSTCTYVGAAKLKELSRR TFIRVTQQ N +FS
Sbjct: 301 VENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVFS 345
>ref|NP_000875.2| inosine-5'-monophosphate dehydrogenase 2 [Homo sapiens].
Length = 514
Score = 124 bits (310), Expect = 3e-28
Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L A V + LD + G
Sbjct: 220 AIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLAQAGVDVVVLDSSQGN 279
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + +K ++ ++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 280 SIFQINMIKYIKDKYPNLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVLAC 339
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + ++ A +I+DGG G +AKA GA VM+G +LA +E+ GE
Sbjct: 340 GRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGE 399
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM K+ Y + +G + V KG++ +
Sbjct: 400 YFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFVPY 459
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ +C +GA L ++
Sbjct: 460 LIAGIQHSCQDIGAKSLTQV 479
>ref|NP_001096075.1| inosine-5'-monophosphate dehydrogenase 1 isoform c [Homo sapiens].
Length = 589
Score = 120 bits (302), Expect = 2e-27
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L V I LD + G
Sbjct: 295 AIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGN 354
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + + V +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 355 SVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMAC 414
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + A+ A II+DGG G V KA GA VM+G +LA +E+ GE
Sbjct: 415 GRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGE 474
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM+K + Y + +G + + KG+++ +
Sbjct: 475 YFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPY 534
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ C +GA L L
Sbjct: 535 LIAGIQHGCQDIGARSLSVL 554
>ref|NP_899066.1| inosine-5'-monophosphate dehydrogenase 1 isoform b [Homo sapiens].
Length = 563
Score = 120 bits (302), Expect = 2e-27
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L V I LD + G
Sbjct: 269 AIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGN 328
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + + V +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 329 SVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMAC 388
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + A+ A II+DGG G V KA GA VM+G +LA +E+ GE
Sbjct: 389 GRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGE 448
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM+K + Y + +G + + KG+++ +
Sbjct: 449 YFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPY 508
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ C +GA L L
Sbjct: 509 LIAGIQHGCQDIGARSLSVL 528
>ref|NP_000874.2| inosine-5'-monophosphate dehydrogenase 1 isoform a [Homo sapiens].
Length = 599
Score = 120 bits (302), Expect = 2e-27
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L V I LD + G
Sbjct: 305 AIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGN 364
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + + V +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 365 SVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMAC 424
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + A+ A II+DGG G V KA GA VM+G +LA +E+ GE
Sbjct: 425 GRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGE 484
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM+K + Y + +G + + KG+++ +
Sbjct: 485 YFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPY 544
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ C +GA L L
Sbjct: 545 LIAGIQHGCQDIGARSLSVL 564
>ref|NP_001136048.1| inosine-5'-monophosphate dehydrogenase 1 isoform d [Homo sapiens].
Length = 566
Score = 120 bits (302), Expect = 2e-27
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Frame = +2
Query: 434 AVHKHYSLEQWKEFASQNPDCLEHLAASSGTGSSDFEQLEQILDAIPQVKYICLDVANGY 613
A+ L++ +++ + D + L + G+ + ++ L V I LD + G
Sbjct: 272 AIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGN 331
Query: 614 SEHFVEFVKDVRKRFPEHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 793
S + + V +++++P ++ GNVVT + LI +G D ++VG+G GS+C T++
Sbjct: 332 SVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMAC 391
Query: 794 GYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 973
G PQ +AV + A+ A II+DGG G V KA GA VM+G +LA +E+ GE
Sbjct: 392 GRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGE 451
Query: 974 LIERNGKKYKLFYGMSSEMAMKKYAGGVAEY-------RATEGKTVEVPFKGAVEHTIRD 1132
+G + K + GM S AM+K + Y + +G + + KG+++ +
Sbjct: 452 YFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPY 511
Query: 1133 ILGGIRSTCTYVGAAKLKEL 1192
++ GI+ C +GA L L
Sbjct: 512 LIAGIQHGCQDIGARSLSVL 531
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 63,488,203
Number of extensions: 1881081
Number of successful extensions: 7881
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 7728
Number of HSP's successfully gapped: 13
Length of query: 494
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 387
Effective length of database: 14,770,016
Effective search space: 5715996192
Effective search space used: 5715996192
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007719
(1482 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 739 0.0
>Sscrofa_Chr07
|| Length = 134764511
Score = 739 bits (373), Expect = 0.0
Identities = 409/418 (97%), Gaps = 4/418 (0%)
Strand = Plus / Minus
Query: 1067 agggccacagagggaaagactgtggaggtgccctttaaaggggctgtagagcacaccatc 1126
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80332213 agggcctcagagggaaagactgtggaggtgccctttaaaggggctgtagagcacaccatc 80332154
Query: 1127 cgggacatccttggagggatccgttctacctgcacctatgtgggagcagctaagctaaag 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80332153 cgggacatccttggagggatccgttctacctgcacctatgtgggagcagctaagctaaag 80332094
Query: 1187 gagctgagtcggagaactaccttcatccgtgtcacccagcaggtgaatcccatcttcagt 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80332093 gagctgagtcggagaactaccttcatccgtgtcacccagcaggtgaatcccatcttcagt 80332034
Query: 1247 gacgagagctagacctgacaattctgccctcccagggcaccagcaccccttctgncattc 1306
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 80332033 gacgagagctagacctgacaattctgccctcccagggcaccagcaccccttctgcaattc 80331974
Query: 1307 ccaactcctaggactcttacttggtcatttcctaccctctctctgctgagggctcctgca 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80331973 ccaactcctaggactcttacttggtcatttcctaccctctctctgctgagggctcctgca 80331914
Query: 1367 gtgattctgcacttatctatctgcacgtgcaaaatgcccagggtactcactggggaagaa 1426
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 80331913 gtgattctgcacttatctatctgcacgtgcaaaatgcccagggtactcactggggaggaa 80331854
Query: 1427 gcaaggaaggcaggctgagaaaatgaaaagta-gata-tcaancaggaatctggggac 1482
||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||
Sbjct: 80331853 gcaaggaaggcaggctgagaaaatgaa--gtaagataatcaaacaggaatctggggac 80331798
Score = 355 bits (179), Expect = 4e-95
Identities = 179/179 (100%)
Strand = Plus / Minus
Query: 1 ttacccagaagtcttctcaggtcctccaccgaagctggaattccttggttaattgttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80340768 ttacccagaagtcttctcaggtcctccaccgaagctggaattccttggttaattgttctc 80340709
Query: 61 tctggctattagcggaacctgttagtgtggcccacgaaggtcagcggagctgcgcgaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80340708 tctggctattagcggaacctgttagtgtggcccacgaaggtcagcggagctgcgcgaggc 80340649
Query: 121 tagttgctaagcaagaggaccttcggtcaactgccacctgggcctcgacgagaggaagt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80340648 tagttgctaagcaagaggaccttcggtcaactgccacctgggcctcgacgagaggaagt 80340590
Score = 351 bits (177), Expect = 7e-94
Identities = 177/177 (100%)
Strand = Plus / Minus
Query: 501 agcatctggccgccagctcgggcacaggctcttctgattttgagcagctggaacagatcc 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80336082 agcatctggccgccagctcgggcacaggctcttctgattttgagcagctggaacagatcc 80336023
Query: 561 tcgatgctattccccaggtgaaatacatatgcctggacgttgccaatggctactctgaac 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80336022 tcgatgctattccccaggtgaaatacatatgcctggacgttgccaatggctactctgaac 80335963
Query: 621 actttgttgaatttgtaaaggatgtgcggaagcgcttccccgaacacaccatcatgg 677
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80335962 actttgttgaatttgtaaaggatgtgcggaagcgcttccccgaacacaccatcatgg 80335906
Score = 321 bits (162), Expect = 6e-85
Identities = 162/162 (100%)
Strand = Plus / Minus
Query: 908 ggggcaggggctgacttcgtgatgctgggtggcatgctggcggggcacagtgagtcaggt 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80332577 ggggcaggggctgacttcgtgatgctgggtggcatgctggcggggcacagtgagtcaggt 80332518
Query: 968 ggtgagctcatcgagaggaatggcaagaagtacaagctcttctatggaatgagttctgaa 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80332517 ggtgagctcatcgagaggaatggcaagaagtacaagctcttctatggaatgagttctgaa 80332458
Query: 1028 atggccatgaagaagtatgcggggggcgtggctgagtacagg 1069
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80332457 atggccatgaagaagtatgcggggggcgtggctgagtacagg 80332416
Score = 246 bits (124), Expect = 3e-62
Identities = 124/124 (100%)
Strand = Plus / Minus
Query: 178 gtctcaaattcgtcactaccccgaagtccctgccatgcctcacatcgacaacgacgtcaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80340254 gtctcaaattcgtcactaccccgaagtccctgccatgcctcacatcgacaacgacgtcaa 80340195
Query: 238 actggacttcaaggatgtcctgctgagacccaaacgcagtacccttaagtctcgaagtga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80340194 actggacttcaaggatgtcctgctgagacccaaacgcagtacccttaagtctcgaagtga 80340135
Query: 298 ggtg 301
||||
Sbjct: 80340134 ggtg 80340131
Score = 242 bits (122), Expect = 5e-61
Identities = 122/122 (100%)
Strand = Plus / Minus
Query: 297 aggtggatctcacaagatccttttcatttcggaactcaaagcagatgtacactgggatcc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80339989 aggtggatctcacaagatccttttcatttcggaactcaaagcagatgtacactgggatcc 80339930
Query: 357 ccattatcgctgccaatatggatactgtgggtacctttgagatggccaaggttctttgta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80339929 ccattatcgctgccaatatggatactgtgggtacctttgagatggccaaggttctttgta 80339870
Query: 417 ag 418
||
Sbjct: 80339869 ag 80339868
Score = 220 bits (111), Expect = 2e-54
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 756 caggctctgtctgtaccacccggaagaaaaccggagtggggtatccacagctgagtgcgg 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80334248 caggctctgtctgtaccacccggaagaaaaccggagtggggtatccacagctgagtgcgg 80334189
Query: 816 tgatggagtgtgcagatgctgcgcacggtctcaaaggccacatcatctcgg 866
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80334188 tgatggagtgtgcagatgctgcgcacggtctcaaaggccacatcatctcgg 80334138
Score = 170 bits (86), Expect = 1e-39
Identities = 86/86 (100%)
Strand = Plus / Minus
Query: 417 agttctccctcttcacggctgtccataaacactacagcctcgagcagtggaaagagtttg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80336315 agttctccctcttcacggctgtccataaacactacagcctcgagcagtggaaagagtttg 80336256
Query: 477 ccagccagaaccctgactgtcttgag 502
||||||||||||||||||||||||||
Sbjct: 80336255 ccagccagaaccctgactgtcttgag 80336230
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 676 ggcagggaatgtagtaacaggagagatggtggaagagctgatcctctctggggctgacat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80334419 ggcagggaatgtagtaacaggagagatggtggaagagctgatcctctctggggctgacat 80334360
Query: 736 catcaaagtgggaattggaccagg 759
||||||||||||||||||||||||
Sbjct: 80334359 catcaaagtgggaattggaccagg 80334336
Score = 89.7 bits (45), Expect = 4e-15
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 865 ggatggaggttgcagctgtcccggcgatgtggccaaggcttttgg 909
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80333953 ggatggaggttgcagctgtcccggcgatgtggccaaggcttttgg 80333909
Score = 71.9 bits (36), Expect = 1e-09
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 676 ggcagggaatgtagtaacaggagagatggtggaagagctgatcctctctggggctgacat 735
|||||||||||| || || |||||||||||||||||||| || || ||||| || || ||
Sbjct: 12872540 ggcagggaatgtggtgacgggagagatggtggaagagcttattctttctggagcagatat 12872599
Query: 736 catcaaagtgggaattggaccagg 759
|||||||||||| | ||||||||
Sbjct: 12872600 aatcaaagtgggagtcggaccagg 12872623
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 39,943,023
Number of extensions: 226
Number of successful extensions: 226
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 226
Number of HSP's successfully gapped: 11
Length of query: 1482
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1461
Effective length of database: 2,808,413,156
Effective search space: 4103091620916
Effective search space used: 4103091620916
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)