Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007726
(1777 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776586.1| proactivator polypeptide [Bos taurus]. 478 e-134
Alignment gi|NP_001096737.1| proactivator polypeptide-like 1 [Bos taurus]. 189 1e-97
Alignment gi|NP_001068779.1| pulmonary surfactant-associated protein B pr... 82 2e-15
>ref|NP_776586.1| proactivator polypeptide [Bos taurus].
Length = 525
Score = 478 bits (1229), Expect = e-134
Identities = 224/266 (84%), Positives = 247/266 (92%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPK+IC L GFC+EVKE+PM+TLVPA+V+SE VI AL LVEPIKKD P KA IYCEVC
Sbjct: 260 MQPKEICVLAGFCDEVKEMPMKTLVPAEVVSENVIPALGLVEPIKKDPAPAKADIYCEVC 319
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
EFVVKEVAKLIDNNRTEEEI+HALDKVCSKLPTS++E+CQE+VDTYGSSILS+LL EASP
Sbjct: 320 EFVVKEVAKLIDNNRTEEEILHALDKVCSKLPTSLAEQCQEVVDTYGSSILSILLDEASP 379
Query: 1178 ELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEK 1357
ELVCSMLHLCS++GLP T RV P KDGGFCEVCK+LV YLDRNLEKNSTK++ILAALEK
Sbjct: 380 ELVCSMLHLCSSRGLPAATVRVMPRKDGGFCEVCKKLVGYLDRNLEKNSTKEQILAALEK 439
Query: 1358 GCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWG 1537
GCSFLPD Y+KQCDQFVTEYEPVL+EILVEVM+PSFVC KIGACP+AHKPLLG EKCVWG
Sbjct: 440 GCSFLPDQYRKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAAHKPLLGAEKCVWG 499
Query: 1538 PSFWCQNMESAALCNAVEHCRRHVWN 1615
PS+WCQNMESAALCNAVEHCRRHVWN
Sbjct: 500 PSYWCQNMESAALCNAVEHCRRHVWN 525
Score = 449 bits (1154), Expect = e-126
Identities = 213/249 (85%), Positives = 235/249 (94%), Gaps = 1/249 (0%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
RECTRGSAVWCQNVKTA+DCGA+QHCLQTVW+KPTVKSLPCDICKDVITAAG++LKDNAT
Sbjct: 23 RECTRGSAVWCQNVKTAADCGAVQHCLQTVWSKPTVKSLPCDICKDVITAAGNLLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
EQEIL+YLERTCDWLPKPNMSA+CKEIVDSY PVILDMIKGQMS PGEVCSALNLCESLQ
Sbjct: 83 EQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDMIKGQMSHPGEVCSALNLCESLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRP-KADGDVCQDC 642
KHLAEL QKQLESNQIPELD+AE VAPFMANIP LLYPQDGS SKP+P KA+G+VCQDC
Sbjct: 143 KHLAELNHQKQLESNQIPELDMAEVVAPFMANIPFLLYPQDGSHSKPQPKKANGNVCQDC 202
Query: 643 IQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHP 822
IQ+VTD+Q A+RTNSTFVEALV+HAKEECDRLGPGM+DMCKNYI+QYSE+AIQM+MHM P
Sbjct: 203 IQLVTDVQEALRTNSTFVEALVDHAKEECDRLGPGMSDMCKNYINQYSEVAIQMVMHMQP 262
Query: 823 TQGHLWAGW 849
+ + AG+
Sbjct: 263 KEICVLAGF 271
Score = 73.9 bits (180), Expect = 4e-13
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 43/218 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLP-TSMSEECQELVDTYGS 1141
P ++ C++C+ V+ L+ +N TE+EI+ L++ C LP +MS C+E+VD+Y
Sbjct: 56 PTVKSLPCDICKDVITAAGNLLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLP 115
Query: 1142 SILSLLL-QEASPELVCSMLHLCST--------------------------------QGL 1222
IL ++ Q + P VCS L+LC + +
Sbjct: 116 VILDMIKGQMSHPGEVCSALNLCESLQKHLAELNHQKQLESNQIPELDMAEVVAPFMANI 175
Query: 1223 PVLT-------ARVTPLK-DGGFCEVCKRLVSYLDRNLEKNSTKQEILA-ALEKGCSFLP 1375
P L ++ P K +G C+ C +LV+ + L NST E L ++ C L
Sbjct: 176 PFLLYPQDGSHSKPQPKKANGNVCQDCIQLVTDVQEALRTNSTFVEALVDHAKEECDRLG 235
Query: 1376 DPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGAC 1489
C ++ +Y V +++++ M+P +C G C
Sbjct: 236 PGMSDMCKNYINQYSEVAIQMVMH-MQPKEICVLAGFC 272
Score = 68.2 bits (165), Expect = 2e-11
Identities = 47/204 (23%), Positives = 91/204 (44%)
Frame = +1
Query: 205 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFP 384
P + C++C+ V+ ++ +N TE+EIL L++ C LP +++ C+E+VD+Y
Sbjct: 309 PAKADIYCEVCEFVVKEVAKLIDNNRTEEEILHALDKVCSKLP-TSLAEQCQEVVDTYGS 367
Query: 385 VILDMIKGQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANI 564
IL ++ + S P VCS L+LC S +
Sbjct: 368 SILSILLDEAS-PELVCSMLHLCSS--------------------------------RGL 394
Query: 565 PLLLYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGP 744
P ++ + P+ DG C+ C ++V L + NST E ++ ++ C L
Sbjct: 395 P-------AATVRVMPRKDGGFCEVCKKLVGYLDRNLEKNST-KEQILAALEKGCSFLPD 446
Query: 745 GMADMCKNYISQYSEIAIQMMMHM 816
C ++++Y + I++++ +
Sbjct: 447 QYRKQCDQFVTEYEPVLIEILVEV 470
Score = 58.9 bits (141), Expect = 1e-08
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 63 CDICKDVITAAGNLLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDMIK 122
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
++ P VCS + C S K L
Sbjct: 123 GQMSHPGEVCSALNLCESLQKHL 145
Score = 51.6 bits (122), Expect = 2e-06
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Frame = +1
Query: 163 CGALQHCLQTVWNKPTVKSLP------CDICKDVITAAGDMLKDNATEQEILVYLERTCD 324
C L C TV+ +P C++CK ++ L+ N+T+++IL LE+ C
Sbjct: 383 CSMLHLCSSRGLPAATVRVMPRKDGGFCEVCKKLVGYLDRNLEKNSTKEQILAALEKGCS 442
Query: 325 WLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQKHL 474
+LP C + V Y PV+++++ ++ P VC + C + K L
Sbjct: 443 FLP-DQYRKQCDQFVTEYEPVLIEILV-EVMDPSFVCLKIGACPAAHKPL 490
>ref|NP_001096737.1| proactivator polypeptide-like 1 [Bos taurus].
Length = 537
Score = 189 bits (481), Expect(2) = 1e-97
Identities = 100/269 (37%), Positives = 155/269 (57%), Gaps = 6/269 (2%)
Frame = +2
Query: 824 PKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVCEF 1003
P +IC GFCEE + P A V + + ALEL P +K V + + C+VC
Sbjct: 245 PSEICRKEGFCEEWQGPPDS----AHVAAVDGVPALELASPWRKGEVQMQGPVACDVCLQ 300
Query: 1004 VVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPEL 1183
VV+ + ++++ ++ I AL++VCS LP + EC +LVDTY +++ +L +PE
Sbjct: 301 VVQRLDHWLESSSSKTIISQALERVCSVLPPPVVRECIKLVDTYVPTVVDVL-SRLTPEK 359
Query: 1184 VCSMLHLCS--TQGLPVLTARVTP----LKDGGFCEVCKRLVSYLDRNLEKNSTKQEILA 1345
+C+++ LC + V P L C C++L NLE+ +T++ +L
Sbjct: 360 MCTVIRLCRGWRRARAVHEGPTNPPPGLLDKDSLCRGCQQLFGVSVHNLEQKTTERRVLR 419
Query: 1346 ALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEK 1525
A + C LP P+ QC +FV+EY+PVL+ L ++M+P +C+K+ AC LLGT++
Sbjct: 420 AFKLACGILPLPFVMQCGRFVSEYQPVLMMTLRDMMDPPTLCTKLRACRDPRNTLLGTDQ 479
Query: 1526 CVWGPSFWCQNMESAALCNAVEHCRRHVW 1612
CV GPSFWCQ+ E+A +CN VEHC+R VW
Sbjct: 480 CVLGPSFWCQSREAAQMCNTVEHCQRRVW 508
Score = 187 bits (475), Expect(2) = 1e-97
Identities = 96/242 (39%), Positives = 145/242 (59%), Gaps = 1/242 (0%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+EC +G AVWC++++ A+ CGA+ HC +W++PT +SLPCD+C DV A + L A
Sbjct: 24 KECAKGPAVWCRDLQAATRCGAVGHCRVAIWSQPTARSLPCDLCLDVAATASNGLNPKAA 83
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQM-SKPGEVCSALNLCESL 462
E ++L + +TC+WLP CK +VD++ IL M+ G + S PG+VC AL LC+ L
Sbjct: 84 ETDVLAAVMKTCEWLPSQESLVKCKGMVDAHGSAILSMLGGDLGSAPGQVCMALTLCQPL 143
Query: 463 QKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDC 642
Q+H A + E D+ + VAPF+AN L SS+ + A G VCQDC
Sbjct: 144 QRHPA--------TPGPLSEEDIYDVVAPFVANGLL--------SSRRQRIAVGTVCQDC 187
Query: 643 IQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHP 822
+Q+VT LQ A+ + + + + +E+C+ LGPG+A +CKNYI Q+ A Q + M P
Sbjct: 188 VQLVTRLQGALGPDLSSLAQVT--TREQCESLGPGLAFLCKNYIHQFFAPAEQTLRFMLP 245
Query: 823 TQ 828
++
Sbjct: 246 SE 247
Score = 52.4 bits (124), Expect = 1e-06
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 32/213 (15%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMS-EECQELVDTYGS 1141
P ++ C++C V + ++ E +++ A+ K C LP+ S +C+ +VD +GS
Sbjct: 57 PTARSLPCDLCLDVAATASNGLNPKAAETDVLAAVMKTCEWLPSQESLVKCKGMVDAHGS 116
Query: 1142 SILSLLLQE--ASPELVCSMLHLC-------STQG----------------LPVLTARVT 1246
+ILS+L + ++P VC L LC +T G +L++R
Sbjct: 117 AILSMLGGDLGSAPGQVCMALTLCQPLQRHPATPGPLSEEDIYDVVAPFVANGLLSSRRQ 176
Query: 1247 PLKDGGFCEVCKRLVSYL------DRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFV 1408
+ G C+ C +LV+ L D + T +E +L G +FL Y QF
Sbjct: 177 RIAVGTVCQDCVQLVTRLQGALGPDLSSLAQVTTREQCESLGPGLAFLCKNY---IHQFF 233
Query: 1409 TEYEPVLVEILVEVMEPSFVCSKIGACPSAHKP 1507
E L M PS +C K G C P
Sbjct: 234 APAEQTL-----RFMLPSEICRKEGFCEEWQGP 261
Score = 50.1 bits (118), Expect = 6e-06
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +1
Query: 184 LQTVWNKPTVKS---LPCDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSAT 354
L + W K V+ + CD+C V+ L+ ++++ I LER C LP P +
Sbjct: 278 LASPWRKGEVQMQGPVACDVCLQVVQRLDHWLESSSSKTIISQALERVCSVLPPP-VVRE 336
Query: 355 CKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQK 468
C ++VD+Y P ++D++ P ++C+ + LC ++
Sbjct: 337 CIKLVDTYVPTVVDVL--SRLTPEKMCTVIRLCRGWRR 372
>ref|NP_001068779.1| pulmonary surfactant-associated protein B precursor [Bos taurus].
Length = 373
Score = 82.0 bits (201), Expect = 2e-15
Identities = 37/115 (32%), Positives = 63/115 (54%)
Frame = +1
Query: 112 CTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATEQ 291
C +G WCQ+++ A C AL HCLQ VW L C C+++ M K+ +
Sbjct: 31 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVEADDL-CQECENISRLLTKMAKEAIFQD 89
Query: 292 EILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCE 456
+ +LE+ CD LP ++ C+ ++D+YFP+I++ + M+ P +C + LC+
Sbjct: 90 SVRKFLEQECDVLPLKLLAPLCRHLLDTYFPLIIEHFQSHMN-PKFICQHVGLCK 143
Score = 68.6 bits (166), Expect = 2e-11
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 19/262 (7%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVE--------PIKKDLVPEK 973
+ PK IC VG C+ P + P L +K+ AL L+ P +DL +
Sbjct: 130 MNPKFICQHVGLCKPRHPEPGKGPEPWGPLLDKL--ALPLLPGVPQAKPGPQTQDLSEQL 187
Query: 974 ATI---YCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSS 1144
I YC +C ++K + +I + + +VC +P + CQ LV+ Y
Sbjct: 188 FPIPIPYCWLCRTLIKRIQAVIPKG----VLAMTVAQVCHVVPLLVGGICQCLVERYSVI 243
Query: 1145 ILSLLLQEASPELVCSMLHLCSTQ-----GLPVL-TARVTPLKDGGFCEVCKRLVSYLDR 1306
+L LL P+LVC ++ CS++ LP L + L C++C + +
Sbjct: 244 LLDTLLGRMLPQLVCGLVLRCSSEDSAGPALPALGSVPGEWLPQDSDCQLCMFVTTQAG- 302
Query: 1307 NLEKNSTKQEILAALEKGC--SFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKI 1480
NS++Q A+ + C ++L +++C++FV E P L ++ + C +
Sbjct: 303 ----NSSEQATPQAMRQACLGTWLD---RQKCERFVEENAPRLQTLVSSGWDAHMACQAL 355
Query: 1481 GACPSAHKPLLGTEKCVWGPSF 1546
G C + PL +CV P F
Sbjct: 356 GTCAAPFSPL----QCVHSPHF 373
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 69,328,049
Number of extensions: 2002900
Number of successful extensions: 9822
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 9713
Number of HSP's successfully gapped: 12
Length of query: 592
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 484
Effective length of database: 14,107,870
Effective search space: 6828209080
Effective search space used: 6828209080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007726
(1777 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_861441.1| PREDICTED: similar to prosaposin isoform 3 [Can... 473 0.0
Alignment gi|XP_536382.2| PREDICTED: similar to prosaposin isoform 1 [Can... 473 0.0
Alignment gi|XP_861590.1| PREDICTED: similar to prosaposin isoform 6 [Can... 472 0.0
Alignment gi|XP_850466.1| PREDICTED: similar to prosaposin isoform 2 [Can... 463 0.0
Alignment gi|XP_861531.1| PREDICTED: similar to prosaposin isoform 5 [Can... 458 0.0
Alignment gi|XP_861469.1| PREDICTED: similar to prosaposin isoform 4 [Can... 293 4e-79
>ref|XP_861441.1| PREDICTED: similar to prosaposin isoform 3 [Canis familiaris].
Length = 524
Score = 473 bits (1216), Expect(2) = 0.0
Identities = 220/266 (82%), Positives = 245/266 (92%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPK+ICGLVGFCE+ KE+PMQTL+PAKV+SE VI ALELVEPIKKD + EK +YCE+C
Sbjct: 259 MQPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPIKKDKIEEKTDVYCEMC 318
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
E+VVKEV KLIDNNRTEEEI++ LDKVC KLP+S+S+ECQE+VDTYGSSILS+LLQEASP
Sbjct: 319 EYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPSSLSKECQEVVDTYGSSILSILLQEASP 378
Query: 1178 ELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEK 1357
ELVC MLHLCS+QGLPVL RV KDGGFCEVCK+LVSYLD NLEKNSTKQEILAALEK
Sbjct: 379 ELVCRMLHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEK 438
Query: 1358 GCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWG 1537
GCSFLPDPYQKQCDQFVTEYEPVL+EILVEVM+PSFVC KIGACP+A KPLLGTEKCVWG
Sbjct: 439 GCSFLPDPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLLGTEKCVWG 498
Query: 1538 PSFWCQNMESAALCNAVEHCRRHVWN 1615
PS+WCQNME+A CNAVEHC+RHVWN
Sbjct: 499 PSYWCQNMEAATQCNAVEHCKRHVWN 524
Score = 447 bits (1150), Expect(2) = 0.0
Identities = 208/241 (86%), Positives = 227/241 (94%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTA+DCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT
Sbjct: 23 KECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
EQEILVYLE+TCDWLP PN+SA+CKE+VDSY PVILDMIKGQMS PGEVCSALNLCESLQ
Sbjct: 83 EQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKGQMSHPGEVCSALNLCESLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAEL QKQLESN+IPELD+AE VAPFMANIPLLLYPQDG S+P+PKA GDVCQDCI
Sbjct: 143 KHLAELNHQKQLESNKIPELDVAEVVAPFMANIPLLLYPQDGPHSEPQPKAGGDVCQDCI 202
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
QM+TD+Q AVRTNSTFVEALV+HAK +CD LGPG+ADMCKNYI+QYS+IA+QMMMHM P
Sbjct: 203 QMITDIQTAVRTNSTFVEALVDHAKAQCDLLGPGIADMCKNYINQYSDIAVQMMMHMQPK 262
Query: 826 Q 828
+
Sbjct: 263 E 263
Score = 77.0 bits (188), Expect = 5e-14
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPT-SMSEECQELVDTYGS 1141
P ++ C++C+ V+ ++ +N TE+EI+ L+K C LP+ ++S C+E+VD+Y
Sbjct: 56 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLP 115
Query: 1142 SILSLLL-QEASPELVCSMLHLCST--------------------------------QGL 1222
IL ++ Q + P VCS L+LC + +
Sbjct: 116 VILDMIKGQMSHPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDVAEVVAPFMANI 175
Query: 1223 PVLT-------ARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG-CSFLPD 1378
P+L + P G C+ C ++++ + + NST E L K C L
Sbjct: 176 PLLLYPQDGPHSEPQPKAGGDVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLGP 235
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSA 1498
C ++ +Y + V++++ M+P +C +G C A
Sbjct: 236 GIADMCKNYINQYSDIAVQMMMH-MQPKEICGLVGFCEQA 274
Score = 62.0 bits (149), Expect = 2e-09
Identities = 49/197 (24%), Positives = 89/197 (45%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++C+ V+ ++ +N TE+EIL L++ C LP ++S C+E+VD+Y IL ++
Sbjct: 315 CEMCEYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPS-SLSKECQEVVDTYGSSILSILL 373
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
Q + P VC L+LC S +P L +
Sbjct: 374 -QEASPELVCRMLHLC----------------SSQGLPVLPVRVI--------------- 401
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
KP+ DG C+ C ++V+ L + + NST E L ++ C L C
Sbjct: 402 -----KPK---DGGFCEVCKKLVSYLDHNLEKNSTKQEILA-ALEKGCSFLPDPYQKQCD 452
Query: 766 NYISQYSEIAIQMMMHM 816
++++Y + I++++ +
Sbjct: 453 QFVTEYEPVLIEILVEV 469
Score = 60.1 bits (144), Expect = 7e-09
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +++ L+ N+T+QEIL LEK C +LP P C + V Y PV+++++
Sbjct: 63 CDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIK 122
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
++ P VCS + C S K L
Sbjct: 123 GQMSHPGEVCSALNLCESLQKHL 145
Score = 56.2 bits (134), Expect = 1e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 409 CEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLIEILV 467
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C + +K L
Sbjct: 468 -EVMDPSFVCLKIGACPAARKPL 489
Score = 50.8 bits (120), Expect = 4e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +2
Query: 1466 VCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
+ S +GA ++ P+LG ++C G + WCQN+++AA C A++HC + VWN
Sbjct: 7 LASLLGAALAS--PVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWN 54
>ref|XP_536382.2| PREDICTED: similar to prosaposin isoform 1 [Canis familiaris].
Length = 517
Score = 473 bits (1216), Expect(2) = 0.0
Identities = 220/266 (82%), Positives = 245/266 (92%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPK+ICGLVGFCE+ KE+PMQTL+PAKV+SE VI ALELVEPIKKD + EK +YCE+C
Sbjct: 252 MQPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPIKKDKIEEKTDVYCEMC 311
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
E+VVKEV KLIDNNRTEEEI++ LDKVC KLP+S+S+ECQE+VDTYGSSILS+LLQEASP
Sbjct: 312 EYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPSSLSKECQEVVDTYGSSILSILLQEASP 371
Query: 1178 ELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEK 1357
ELVC MLHLCS+QGLPVL RV KDGGFCEVCK+LVSYLD NLEKNSTKQEILAALEK
Sbjct: 372 ELVCRMLHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEK 431
Query: 1358 GCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWG 1537
GCSFLPDPYQKQCDQFVTEYEPVL+EILVEVM+PSFVC KIGACP+A KPLLGTEKCVWG
Sbjct: 432 GCSFLPDPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLLGTEKCVWG 491
Query: 1538 PSFWCQNMESAALCNAVEHCRRHVWN 1615
PS+WCQNME+A CNAVEHC+RHVWN
Sbjct: 492 PSYWCQNMEAATQCNAVEHCKRHVWN 517
Score = 447 bits (1150), Expect(2) = 0.0
Identities = 208/241 (86%), Positives = 227/241 (94%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTA+DCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT
Sbjct: 16 KECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 75
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
EQEILVYLE+TCDWLP PN+SA+CKE+VDSY PVILDMIKGQMS PGEVCSALNLCESLQ
Sbjct: 76 EQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKGQMSHPGEVCSALNLCESLQ 135
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAEL QKQLESN+IPELD+AE VAPFMANIPLLLYPQDG S+P+PKA GDVCQDCI
Sbjct: 136 KHLAELNHQKQLESNKIPELDVAEVVAPFMANIPLLLYPQDGPHSEPQPKAGGDVCQDCI 195
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
QM+TD+Q AVRTNSTFVEALV+HAK +CD LGPG+ADMCKNYI+QYS+IA+QMMMHM P
Sbjct: 196 QMITDIQTAVRTNSTFVEALVDHAKAQCDLLGPGIADMCKNYINQYSDIAVQMMMHMQPK 255
Query: 826 Q 828
+
Sbjct: 256 E 256
Score = 77.0 bits (188), Expect = 5e-14
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPT-SMSEECQELVDTYGS 1141
P ++ C++C+ V+ ++ +N TE+EI+ L+K C LP+ ++S C+E+VD+Y
Sbjct: 49 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLP 108
Query: 1142 SILSLLL-QEASPELVCSMLHLCST--------------------------------QGL 1222
IL ++ Q + P VCS L+LC + +
Sbjct: 109 VILDMIKGQMSHPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDVAEVVAPFMANI 168
Query: 1223 PVLT-------ARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG-CSFLPD 1378
P+L + P G C+ C ++++ + + NST E L K C L
Sbjct: 169 PLLLYPQDGPHSEPQPKAGGDVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLGP 228
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSA 1498
C ++ +Y + V++++ M+P +C +G C A
Sbjct: 229 GIADMCKNYINQYSDIAVQMMMH-MQPKEICGLVGFCEQA 267
Score = 62.0 bits (149), Expect = 2e-09
Identities = 49/197 (24%), Positives = 89/197 (45%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++C+ V+ ++ +N TE+EIL L++ C LP ++S C+E+VD+Y IL ++
Sbjct: 308 CEMCEYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPS-SLSKECQEVVDTYGSSILSILL 366
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
Q + P VC L+LC S +P L +
Sbjct: 367 -QEASPELVCRMLHLC----------------SSQGLPVLPVRVI--------------- 394
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
KP+ DG C+ C ++V+ L + + NST E L ++ C L C
Sbjct: 395 -----KPK---DGGFCEVCKKLVSYLDHNLEKNSTKQEILA-ALEKGCSFLPDPYQKQCD 445
Query: 766 NYISQYSEIAIQMMMHM 816
++++Y + I++++ +
Sbjct: 446 QFVTEYEPVLIEILVEV 462
Score = 60.1 bits (144), Expect = 7e-09
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +++ L+ N+T+QEIL LEK C +LP P C + V Y PV+++++
Sbjct: 56 CDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIK 115
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
++ P VCS + C S K L
Sbjct: 116 GQMSHPGEVCSALNLCESLQKHL 138
Score = 56.2 bits (134), Expect = 1e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 402 CEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLIEILV 460
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C + +K L
Sbjct: 461 -EVMDPSFVCLKIGACPAARKPL 482
Score = 50.4 bits (119), Expect = 5e-06
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 1505 PLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
P+LG ++C G + WCQN+++AA C A++HC + VWN
Sbjct: 11 PVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWN 47
>ref|XP_861590.1| PREDICTED: similar to prosaposin isoform 6 [Canis familiaris].
Length = 527
Score = 472 bits (1215), Expect(2) = 0.0
Identities = 220/265 (83%), Positives = 244/265 (92%)
Frame = +2
Query: 821 QPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVCE 1000
QPK+ICGLVGFCE+ KE+PMQTL+PAKV+SE VI ALELVEPIKKD + EK +YCE+CE
Sbjct: 263 QPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPIKKDKIEEKTDVYCEMCE 322
Query: 1001 FVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPE 1180
+VVKEV KLIDNNRTEEEI++ LDKVC KLP+S+S+ECQE+VDTYGSSILS+LLQEASPE
Sbjct: 323 YVVKEVVKLIDNNRTEEEILNTLDKVCLKLPSSLSKECQEVVDTYGSSILSILLQEASPE 382
Query: 1181 LVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG 1360
LVC MLHLCS+QGLPVL RV KDGGFCEVCK+LVSYLD NLEKNSTKQEILAALEKG
Sbjct: 383 LVCRMLHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEKG 442
Query: 1361 CSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWGP 1540
CSFLPDPYQKQCDQFVTEYEPVL+EILVEVM+PSFVC KIGACP+A KPLLGTEKCVWGP
Sbjct: 443 CSFLPDPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLLGTEKCVWGP 502
Query: 1541 SFWCQNMESAALCNAVEHCRRHVWN 1615
S+WCQNME+A CNAVEHC+RHVWN
Sbjct: 503 SYWCQNMEAATQCNAVEHCKRHVWN 527
Score = 445 bits (1145), Expect(2) = 0.0
Identities = 208/241 (86%), Positives = 226/241 (93%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTA+DCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT
Sbjct: 23 KECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
EQEILVYLE+TCDWLP PN+SA+CKE+VDSY PVILDMIKGQMS PGEVCSALNLCESLQ
Sbjct: 83 EQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKGQMSHPGEVCSALNLCESLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAEL QKQLESN+IPELD+AE VAPFMANIPLLLYPQDG S+P+PKA GDVCQDCI
Sbjct: 143 KHLAELNHQKQLESNKIPELDVAEVVAPFMANIPLLLYPQDGPHSEPQPKAGGDVCQDCI 202
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
QM+TD+Q AVRTNSTFVEALV+HAK +CD LGPG+ADMCKNYI+QYS+IA+QMMMHM
Sbjct: 203 QMITDIQTAVRTNSTFVEALVDHAKAQCDLLGPGIADMCKNYINQYSDIAVQMMMHMQDQ 262
Query: 826 Q 828
Q
Sbjct: 263 Q 263
Score = 75.1 bits (183), Expect = 2e-13
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 44/222 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPT-SMSEECQELVDTYGS 1141
P ++ C++C+ V+ ++ +N TE+EI+ L+K C LP+ ++S C+E+VD+Y
Sbjct: 56 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLP 115
Query: 1142 SILSLLL-QEASPELVCSMLHLCST--------------------------------QGL 1222
IL ++ Q + P VCS L+LC + +
Sbjct: 116 VILDMIKGQMSHPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDVAEVVAPFMANI 175
Query: 1223 PVLT-------ARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG-CSFLPD 1378
P+L + P G C+ C ++++ + + NST E L K C L
Sbjct: 176 PLLLYPQDGPHSEPQPKAGGDVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLGP 235
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEV--MEPSFVCSKIGACPSA 1498
C ++ +Y + V++++ + +P +C +G C A
Sbjct: 236 GIADMCKNYINQYSDIAVQMMMHMQDQQPKEICGLVGFCEQA 277
Score = 62.0 bits (149), Expect = 2e-09
Identities = 49/197 (24%), Positives = 89/197 (45%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++C+ V+ ++ +N TE+EIL L++ C LP ++S C+E+VD+Y IL ++
Sbjct: 318 CEMCEYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPS-SLSKECQEVVDTYGSSILSILL 376
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
Q + P VC L+LC S +P L +
Sbjct: 377 -QEASPELVCRMLHLC----------------SSQGLPVLPVRVI--------------- 404
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
KP+ DG C+ C ++V+ L + + NST E L ++ C L C
Sbjct: 405 -----KPK---DGGFCEVCKKLVSYLDHNLEKNSTKQEILA-ALEKGCSFLPDPYQKQCD 455
Query: 766 NYISQYSEIAIQMMMHM 816
++++Y + I++++ +
Sbjct: 456 QFVTEYEPVLIEILVEV 472
Score = 60.1 bits (144), Expect = 7e-09
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +++ L+ N+T+QEIL LEK C +LP P C + V Y PV+++++
Sbjct: 63 CDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIK 122
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
++ P VCS + C S K L
Sbjct: 123 GQMSHPGEVCSALNLCESLQKHL 145
Score = 56.2 bits (134), Expect = 1e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 412 CEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLIEILV 470
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C + +K L
Sbjct: 471 -EVMDPSFVCLKIGACPAARKPL 492
Score = 55.5 bits (132), Expect = 2e-07
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Frame = +1
Query: 229 DICKDVITAAGDM---LKDNATEQEILV-YLERTCDWLPKPNMSATCKEIVDSYFPVILD 396
D+C+D I D+ ++ N+T E LV + + CD L P ++ CK ++ Y + +
Sbjct: 196 DVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLG-PGIADMCKNYINQYSDIAVQ 254
Query: 397 MIKG-QMSKPGEVCSALNLCESLQK-HLAELTQQKQLESNQIPELDLAEAVAPFMANIPL 570
M+ Q +P E+C + CE ++ + L K + N IP L+L E +
Sbjct: 255 MMMHMQDQQPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPI--------- 305
Query: 571 LLYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGM 750
K K D C+ C +V ++ + N T E ++N + C +L +
Sbjct: 306 -------KKDKIEEKTD-VYCEMCEYVVKEVVKLIDNNRT-EEEILNTLDKVCLKLPSSL 356
Query: 751 ADMCKNYISQYSEIAIQMMM 810
+ C+ + Y + +++
Sbjct: 357 SKECQEVVDTYGSSILSILL 376
Score = 50.8 bits (120), Expect = 4e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +2
Query: 1466 VCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
+ S +GA ++ P+LG ++C G + WCQN+++AA C A++HC + VWN
Sbjct: 7 LASLLGAALAS--PVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWN 54
>ref|XP_850466.1| PREDICTED: similar to prosaposin isoform 2 [Canis familiaris].
Length = 517
Score = 463 bits (1192), Expect(2) = 0.0
Identities = 218/265 (82%), Positives = 242/265 (91%)
Frame = +2
Query: 821 QPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVCE 1000
QPK+ICGLVGFCE+ KE+PMQTL+PAKV+SE VI ALELVEPIK + EK +YCE+CE
Sbjct: 256 QPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPIK---IEEKTDVYCEMCE 312
Query: 1001 FVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPE 1180
+VVKEV KLIDNNRTEEEI++ LDKVC KLP+S+S+ECQE+VDTYGSSILS+LLQEASPE
Sbjct: 313 YVVKEVVKLIDNNRTEEEILNTLDKVCLKLPSSLSKECQEVVDTYGSSILSILLQEASPE 372
Query: 1181 LVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG 1360
LVC MLHLCS+QGLPVL RV KDGGFCEVCK+LVSYLD NLEKNSTKQEILAALEKG
Sbjct: 373 LVCRMLHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEKG 432
Query: 1361 CSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWGP 1540
CSFLPDPYQKQCDQFVTEYEPVL+EILVEVM+PSFVC KIGACP+A KPLLGTEKCVWGP
Sbjct: 433 CSFLPDPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLLGTEKCVWGP 492
Query: 1541 SFWCQNMESAALCNAVEHCRRHVWN 1615
S+WCQNME+A CNAVEHC+RHVWN
Sbjct: 493 SYWCQNMEAATQCNAVEHCKRHVWN 517
Score = 445 bits (1145), Expect(2) = 0.0
Identities = 208/241 (86%), Positives = 226/241 (93%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTA+DCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT
Sbjct: 16 KECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 75
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
EQEILVYLE+TCDWLP PN+SA+CKE+VDSY PVILDMIKGQMS PGEVCSALNLCESLQ
Sbjct: 76 EQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKGQMSHPGEVCSALNLCESLQ 135
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAEL QKQLESN+IPELD+AE VAPFMANIPLLLYPQDG S+P+PKA GDVCQDCI
Sbjct: 136 KHLAELNHQKQLESNKIPELDVAEVVAPFMANIPLLLYPQDGPHSEPQPKAGGDVCQDCI 195
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
QM+TD+Q AVRTNSTFVEALV+HAK +CD LGPG+ADMCKNYI+QYS+IA+QMMMHM
Sbjct: 196 QMITDIQTAVRTNSTFVEALVDHAKAQCDLLGPGIADMCKNYINQYSDIAVQMMMHMQDQ 255
Query: 826 Q 828
Q
Sbjct: 256 Q 256
Score = 75.1 bits (183), Expect = 2e-13
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 44/222 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPT-SMSEECQELVDTYGS 1141
P ++ C++C+ V+ ++ +N TE+EI+ L+K C LP+ ++S C+E+VD+Y
Sbjct: 49 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLP 108
Query: 1142 SILSLLL-QEASPELVCSMLHLCST--------------------------------QGL 1222
IL ++ Q + P VCS L+LC + +
Sbjct: 109 VILDMIKGQMSHPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDVAEVVAPFMANI 168
Query: 1223 PVLT-------ARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG-CSFLPD 1378
P+L + P G C+ C ++++ + + NST E L K C L
Sbjct: 169 PLLLYPQDGPHSEPQPKAGGDVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLGP 228
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEV--MEPSFVCSKIGACPSA 1498
C ++ +Y + V++++ + +P +C +G C A
Sbjct: 229 GIADMCKNYINQYSDIAVQMMMHMQDQQPKEICGLVGFCEQA 270
Score = 62.0 bits (149), Expect = 2e-09
Identities = 49/197 (24%), Positives = 89/197 (45%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++C+ V+ ++ +N TE+EIL L++ C LP ++S C+E+VD+Y IL ++
Sbjct: 308 CEMCEYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPS-SLSKECQEVVDTYGSSILSILL 366
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
Q + P VC L+LC S +P L +
Sbjct: 367 -QEASPELVCRMLHLC----------------SSQGLPVLPVRVI--------------- 394
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
KP+ DG C+ C ++V+ L + + NST E L ++ C L C
Sbjct: 395 -----KPK---DGGFCEVCKKLVSYLDHNLEKNSTKQEILA-ALEKGCSFLPDPYQKQCD 445
Query: 766 NYISQYSEIAIQMMMHM 816
++++Y + I++++ +
Sbjct: 446 QFVTEYEPVLIEILVEV 462
Score = 60.1 bits (144), Expect = 7e-09
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +++ L+ N+T+QEIL LEK C +LP P C + V Y PV+++++
Sbjct: 56 CDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIK 115
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
++ P VCS + C S K L
Sbjct: 116 GQMSHPGEVCSALNLCESLQKHL 138
Score = 56.2 bits (134), Expect = 1e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 402 CEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLIEILV 460
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C + +K L
Sbjct: 461 -EVMDPSFVCLKIGACPAARKPL 482
Score = 54.3 bits (129), Expect = 4e-07
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Frame = +1
Query: 229 DICKDVITAAGDM---LKDNATEQEILV-YLERTCDWLPKPNMSATCKEIVDSYFPVILD 396
D+C+D I D+ ++ N+T E LV + + CD L P ++ CK ++ Y + +
Sbjct: 189 DVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLG-PGIADMCKNYINQYSDIAVQ 247
Query: 397 MIKG-QMSKPGEVCSALNLCESLQK-HLAELTQQKQLESNQIPELDLAEAVAPFMANIPL 570
M+ Q +P E+C + CE ++ + L K + N IP L+L E +
Sbjct: 248 MMMHMQDQQPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPI--------- 298
Query: 571 LLYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGM 750
K K D C+ C +V ++ + N T E ++N + C +L +
Sbjct: 299 ----------KIEEKTD-VYCEMCEYVVKEVVKLIDNNRT-EEEILNTLDKVCLKLPSSL 346
Query: 751 ADMCKNYISQYSEIAIQMMM 810
+ C+ + Y + +++
Sbjct: 347 SKECQEVVDTYGSSILSILL 366
Score = 50.4 bits (119), Expect = 5e-06
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 1505 PLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
P+LG ++C G + WCQN+++AA C A++HC + VWN
Sbjct: 11 PVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWN 47
>ref|XP_861531.1| PREDICTED: similar to prosaposin isoform 5 [Canis familiaris].
Length = 513
Score = 458 bits (1178), Expect(2) = 0.0
Identities = 218/266 (81%), Positives = 242/266 (90%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPK+ICGLVGFCE+ KE+PMQTL+PAKV+SE VI ALELVEPIK VP +YCE+C
Sbjct: 252 MQPKEICGLVGFCEQAKEMPMQTLIPAKVVSENVIPALELVEPIK---VPG-TDVYCEMC 307
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
E+VVKEV KLIDNNRTEEEI++ LDKVC KLP+S+S+ECQE+VDTYGSSILS+LLQEASP
Sbjct: 308 EYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPSSLSKECQEVVDTYGSSILSILLQEASP 367
Query: 1178 ELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEK 1357
ELVC MLHLCS+QGLPVL RV KDGGFCEVCK+LVSYLD NLEKNSTKQEILAALEK
Sbjct: 368 ELVCRMLHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEK 427
Query: 1358 GCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWG 1537
GCSFLPDPYQKQCDQFVTEYEPVL+EILVEVM+PSFVC KIGACP+A KPLLGTEKCVWG
Sbjct: 428 GCSFLPDPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLLGTEKCVWG 487
Query: 1538 PSFWCQNMESAALCNAVEHCRRHVWN 1615
PS+WCQNME+A CNAVEHC+RHVWN
Sbjct: 488 PSYWCQNMEAATQCNAVEHCKRHVWN 513
Score = 447 bits (1150), Expect(2) = 0.0
Identities = 208/241 (86%), Positives = 227/241 (94%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTA+DCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT
Sbjct: 16 KECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 75
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
EQEILVYLE+TCDWLP PN+SA+CKE+VDSY PVILDMIKGQMS PGEVCSALNLCESLQ
Sbjct: 76 EQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIKGQMSHPGEVCSALNLCESLQ 135
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAEL QKQLESN+IPELD+AE VAPFMANIPLLLYPQDG S+P+PKA GDVCQDCI
Sbjct: 136 KHLAELNHQKQLESNKIPELDVAEVVAPFMANIPLLLYPQDGPHSEPQPKAGGDVCQDCI 195
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
QM+TD+Q AVRTNSTFVEALV+HAK +CD LGPG+ADMCKNYI+QYS+IA+QMMMHM P
Sbjct: 196 QMITDIQTAVRTNSTFVEALVDHAKAQCDLLGPGIADMCKNYINQYSDIAVQMMMHMQPK 255
Query: 826 Q 828
+
Sbjct: 256 E 256
Score = 77.0 bits (188), Expect = 5e-14
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPT-SMSEECQELVDTYGS 1141
P ++ C++C+ V+ ++ +N TE+EI+ L+K C LP+ ++S C+E+VD+Y
Sbjct: 49 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLP 108
Query: 1142 SILSLLL-QEASPELVCSMLHLCST--------------------------------QGL 1222
IL ++ Q + P VCS L+LC + +
Sbjct: 109 VILDMIKGQMSHPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDVAEVVAPFMANI 168
Query: 1223 PVLT-------ARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG-CSFLPD 1378
P+L + P G C+ C ++++ + + NST E L K C L
Sbjct: 169 PLLLYPQDGPHSEPQPKAGGDVCQDCIQMITDIQTAVRTNSTFVEALVDHAKAQCDLLGP 228
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSA 1498
C ++ +Y + V++++ M+P +C +G C A
Sbjct: 229 GIADMCKNYINQYSDIAVQMMMH-MQPKEICGLVGFCEQA 267
Score = 62.0 bits (149), Expect = 2e-09
Identities = 49/197 (24%), Positives = 89/197 (45%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++C+ V+ ++ +N TE+EIL L++ C LP ++S C+E+VD+Y IL ++
Sbjct: 304 CEMCEYVVKEVVKLIDNNRTEEEILNTLDKVCLKLPS-SLSKECQEVVDTYGSSILSILL 362
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
Q + P VC L+LC S +P L +
Sbjct: 363 -QEASPELVCRMLHLC----------------SSQGLPVLPVRVI--------------- 390
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
KP+ DG C+ C ++V+ L + + NST E L ++ C L C
Sbjct: 391 -----KPK---DGGFCEVCKKLVSYLDHNLEKNSTKQEILA-ALEKGCSFLPDPYQKQCD 441
Query: 766 NYISQYSEIAIQMMMHM 816
++++Y + I++++ +
Sbjct: 442 QFVTEYEPVLIEILVEV 458
Score = 60.1 bits (144), Expect = 7e-09
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +++ L+ N+T+QEIL LEK C +LP P C + V Y PV+++++
Sbjct: 56 CDICKDVITAAGDMLKDNATEQEILVYLEKTCDWLPSPNLSASCKEVVDSYLPVILDMIK 115
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
++ P VCS + C S K L
Sbjct: 116 GQMSHPGEVCSALNLCESLQKHL 138
Score = 56.2 bits (134), Expect = 1e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 398 CEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLIEILV 456
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C + +K L
Sbjct: 457 -EVMDPSFVCLKIGACPAARKPL 478
Score = 50.4 bits (119), Expect = 5e-06
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 1505 PLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
P+LG ++C G + WCQN+++AA C A++HC + VWN
Sbjct: 11 PVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWN 47
>ref|XP_861469.1| PREDICTED: similar to prosaposin isoform 4 [Canis familiaris].
Length = 240
Score = 293 bits (750), Expect = 4e-79
Identities = 141/217 (64%), Positives = 160/217 (73%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSS 1144
P ++ C++C+ V+ ++ +N TE+EI
Sbjct: 56 PTVKSLPCDICKDVITAAGDMLKDNATEQEI----------------------------- 86
Query: 1145 ILSLLLQEASPELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNS 1324
L+ EASPELVC MLHLCS+QGLPVL RV KDGGFCEVCK+LVSYLD NLEKNS
Sbjct: 87 ---LVYLEASPELVCRMLHLCSSQGLPVLPVRVIKPKDGGFCEVCKKLVSYLDHNLEKNS 143
Query: 1325 TKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHK 1504
TKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVL+EILVEVM+PSFVC KIGACP+A K
Sbjct: 144 TKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARK 203
Query: 1505 PLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
PLLGTEKCVWGPS+WCQNME+A CNAVEHC+RHVWN
Sbjct: 204 PLLGTEKCVWGPSYWCQNMEAATQCNAVEHCKRHVWN 240
Score = 151 bits (382), Expect = 2e-36
Identities = 94/237 (39%), Positives = 119/237 (50%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTA+DCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT
Sbjct: 23 KECTRGSAVWCQNVKTAADCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
EQEILVYLE + P VC L+LC
Sbjct: 83 EQEILVYLE----------------------------------ASPELVCRMLHLC---- 104
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
S +P L + KP+ DG C+ C
Sbjct: 105 ------------SSQGLPVLPVRVI--------------------KPK---DGGFCEVCK 129
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHM 816
++V+ L + + NST E L ++ C L C ++++Y + I++++ +
Sbjct: 130 KLVSYLDHNLEKNSTKQEILA-ALEKGCSFLPDPYQKQCDQFVTEYEPVLIEILVEV 185
Score = 60.1 bits (144), Expect = 7e-09
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Frame = +2
Query: 758 CARTI-SASTRKSLSR**CTCIQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALE 934
C +T+ + T KSL C KD+ G + + LV + E V L
Sbjct: 48 CLQTVWNKPTVKSLP-----CDICKDVITAAGDMLKDNATEQEILVYLEASPELVCRMLH 102
Query: 935 L-------VEPIKKDLVPEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLP 1093
L V P++ ++ K +CEVC+ +V + ++ N T++EI+ AL+K CS LP
Sbjct: 103 LCSSQGLPVLPVR--VIKPKDGGFCEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLP 160
Query: 1094 TSMSEECQELVDTYGSSILSLLLQEASPELVCSMLHLCSTQGLPVL 1231
++C + V Y ++ +L++ P VC + C P+L
Sbjct: 161 DPYQKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAARKPLL 206
Score = 56.2 bits (134), Expect = 1e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 125 CEVCKKLVSYLDHNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLIEILV 183
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C + +K L
Sbjct: 184 -EVMDPSFVCLKIGACPAARKPL 205
Score = 50.8 bits (120), Expect = 4e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +2
Query: 1466 VCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
+ S +GA ++ P+LG ++C G + WCQN+++AA C A++HC + VWN
Sbjct: 7 LASLLGAALAS--PVLGLKECTRGSAVWCQNVKTAADCGALQHCLQTVWN 54
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 71,996,766
Number of extensions: 2052421
Number of successful extensions: 9722
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 9570
Number of HSP's successfully gapped: 42
Length of query: 592
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 484
Effective length of database: 15,274,216
Effective search space: 7392720544
Effective search space used: 7392720544
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007726
(1777 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_035309.3| sulfated glycoprotein 1 isoform B preproprotein... 358 0.0
Alignment gi|NP_001139593.1| sulfated glycoprotein 1 isoform C preproprot... 357 0.0
Alignment gi|NP_001139595.1| sulfated glycoprotein 1 isoform E preproprot... 343 0.0
Alignment gi|NP_780458.2| proactivator polypeptide-like 1 [Mus musculus]. 204 e-106
Alignment gi|NP_001139596.1| sulfated glycoprotein 1 isoform F preproprot... 361 1e-99
Alignment gi|NP_001139594.1| sulfated glycoprotein 1 isoform D preproprot... 361 1e-99
Alignment gi|NP_001139592.1| sulfated glycoprotein 1 isoform A preproprot... 361 1e-99
Alignment gi|NP_680088.1| pulmonary surfactant-associated protein B precu... 91 4e-18
>ref|NP_035309.3| sulfated glycoprotein 1 isoform B preproprotein [Mus musculus].
Length = 557
Score = 358 bits (918), Expect(2) = 0.0
Identities = 160/241 (66%), Positives = 208/241 (86%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ C+ GSAV C++VKTA DCGA++HC Q VW+KPT KSLPCDICK V+T AG++LKDNAT
Sbjct: 23 KTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
++EIL YLE+TC+W+ ++SA+CKE+VDSY PVILDMIKG+MS PGEVCSALNLC+SLQ
Sbjct: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
++LAE QKQLESN+IPE+D+A VAPFM+NIPLLLYPQD S+P+PKA+ DVCQDC+
Sbjct: 143 EYLAE-QNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCM 201
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
++V+D+Q AV+TNS+F++ V+H KE+CDRLGPG++D+CKNY+ QYSE+ +QM+MHM
Sbjct: 202 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQ 261
Query: 826 Q 828
Q
Sbjct: 262 Q 262
Score = 339 bits (869), Expect(2) = 0.0
Identities = 162/296 (54%), Positives = 205/296 (69%), Gaps = 31/296 (10%)
Frame = +2
Query: 821 QPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVCE 1000
QPK+IC L GFC EVK VPM+TLVPA + ++ ALE+++P +++LV I C+ C+
Sbjct: 262 QPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQ 321
Query: 1001 FVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPE 1180
FV+ + ++LI NN TEE ++ L C+ LP +CQE+V T+G S+L + + E +P
Sbjct: 322 FVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPS 381
Query: 1181 LVCSMLHLCST---------QGLPV----------------------LTARVTPLKDGGF 1267
+C ++ LC+ Q P L A V P K+GGF
Sbjct: 382 SLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQPAQPKQSALPAHVPPQKNGGF 441
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILVE 1447
CEVCK+LV YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQCD FV EYEP+L+EILVE
Sbjct: 442 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVE 501
Query: 1448 VMEPSFVCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
VM+P FVCSKIG CPSA+K LLGTEKCVWGPS+WCQNME+AA CNAV+HC+RHVWN
Sbjct: 502 VMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVWN 557
Score = 77.8 bits (190), Expect = 3e-14
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 43/218 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKL-PTSMSEECQELVDTYGS 1141
P ++ C++C+ VV E L+ +N T+EEI+H L+K C + +S+S C+E+VD+Y
Sbjct: 56 PTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLP 115
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST-------------------------------QGLP 1225
IL ++ E S P VCS L+LC + +P
Sbjct: 116 VILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIP 175
Query: 1226 VL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPDP 1381
+L ++ P + C+ C +LVS + ++ NS+ Q + +++ C L
Sbjct: 176 LLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG 235
Query: 1382 YQKQCDQFVTEYEPVLVEILVEV--MEPSFVCSKIGAC 1489
C +V +Y V V++L+ + +P +C G C
Sbjct: 236 VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFC 273
Score = 71.6 bits (174), Expect = 2e-12
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEP-------------IKKD 958
+ P +CG++G C E+ PA ++SAL L EP +
Sbjct: 378 VNPSSLCGVIGLCAARPELVEALEQPAPA----IVSAL-LKEPTPPKQPAQPKQSALPAH 432
Query: 959 LVPEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYG 1138
+ P+K +CEVC+ +V + ++ N T+EEI+ AL+K CS LP ++C + V Y
Sbjct: 433 VPPQKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYE 492
Query: 1139 SSILSLLLQEASPELVCSMLHLC 1207
+L +L++ P VCS + +C
Sbjct: 493 PLLLEILVEVMDPGFVCSKIGVC 515
Score = 65.9 bits (159), Expect = 1e-10
Identities = 44/197 (22%), Positives = 93/197 (47%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C C+ V+ +++ +NATE+ ++ L C LP P C+E+V ++ P +LD+
Sbjct: 317 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP-ARTKCQEVVGTFGPSLLDIFI 375
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
+++ P +C + LC + EL + + + I L E P P Q
Sbjct: 376 HEVN-PSSLCGVIGLCAA----RPELVEALEQPAPAIVSALLKEPTPPKQPAQP----KQ 426
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
+ P+ +G C+ C ++V L++ + NST E ++ ++ C L C
Sbjct: 427 SALPAHVPPQKNGGFCEVCKKLVLYLEHNLEKNST-KEEILAALEKGCSFLPDPYQKQCD 485
Query: 766 NYISQYSEIAIQMMMHM 816
+++++Y + +++++ +
Sbjct: 486 DFVAEYEPLLLEILVEV 502
Score = 60.1 bits (144), Expect = 5e-09
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +2
Query: 1058 IHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPELVCSMLHLCSTQGLPVLTA 1237
++AL S L T+++ Q+ G S ++L ++ + C + C TA
Sbjct: 1 MYALALFASLLATALTSPVQDPKTCSGGS--AVLCRDVKTAVDCGAVKHCQQMVWSKPTA 58
Query: 1238 RVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPD-PYQKQCDQFVTE 1414
+ P C++CK +V+ L+ N+T++EIL LEK C ++ D C + V
Sbjct: 59 KSLP------CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDS 112
Query: 1415 YEPVLVEILV-EVMEPSFVCSKIGACPSAHKPL 1510
Y PV+++++ E+ P VCS + C S + L
Sbjct: 113 YLPVILDMIKGEMSNPGEVCSALNLCQSLQEYL 145
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T++EIL LE+ C +LP P C + V Y P++L+++
Sbjct: 442 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDP-YQKQCDDFVAEYEPLLLEILV 500
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ PG VCS + +C S K L
Sbjct: 501 -EVMDPGFVCSKIGVCPSAYKLL 522
>ref|NP_001139593.1| sulfated glycoprotein 1 isoform C preproprotein [Mus musculus].
Length = 556
Score = 357 bits (915), Expect(2) = 0.0
Identities = 159/237 (67%), Positives = 207/237 (87%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ C+ GSAV C++VKTA DCGA++HC Q VW+KPT KSLPCDICK V+T AG++LKDNAT
Sbjct: 23 KTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
++EIL YLE+TC+W+ ++SA+CKE+VDSY PVILDMIKG+MS PGEVCSALNLC+SLQ
Sbjct: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
++LAE QKQLESN+IPE+D+A VAPFM+NIPLLLYPQD S+P+PKA+ DVCQDC+
Sbjct: 143 EYLAE-QNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCM 201
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHM 816
++V+D+Q AV+TNS+F++ V+H KE+CDRLGPG++D+CKNY+ QYSE+ +QM+MHM
Sbjct: 202 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHM 258
Score = 339 bits (869), Expect(2) = 0.0
Identities = 162/296 (54%), Positives = 205/296 (69%), Gaps = 31/296 (10%)
Frame = +2
Query: 821 QPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVCE 1000
QPK+IC L GFC EVK VPM+TLVPA + ++ ALE+++P +++LV I C+ C+
Sbjct: 261 QPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQ 320
Query: 1001 FVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPE 1180
FV+ + ++LI NN TEE ++ L C+ LP +CQE+V T+G S+L + + E +P
Sbjct: 321 FVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPS 380
Query: 1181 LVCSMLHLCST---------QGLPV----------------------LTARVTPLKDGGF 1267
+C ++ LC+ Q P L A V P K+GGF
Sbjct: 381 SLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQPAQPKQSALPAHVPPQKNGGF 440
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILVE 1447
CEVCK+LV YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQCD FV EYEP+L+EILVE
Sbjct: 441 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVE 500
Query: 1448 VMEPSFVCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
VM+P FVCSKIG CPSA+K LLGTEKCVWGPS+WCQNME+AA CNAV+HC+RHVWN
Sbjct: 501 VMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVWN 556
Score = 71.6 bits (174), Expect(2) = 3e-20
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEP-------------IKKD 958
+ P +CG++G C E+ PA ++SAL L EP +
Sbjct: 377 VNPSSLCGVIGLCAARPELVEALEQPAPA----IVSAL-LKEPTPPKQPAQPKQSALPAH 431
Query: 959 LVPEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYG 1138
+ P+K +CEVC+ +V + ++ N T+EEI+ AL+K CS LP ++C + V Y
Sbjct: 432 VPPQKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYE 491
Query: 1139 SSILSLLLQEASPELVCSMLHLC 1207
+L +L++ P VCS + +C
Sbjct: 492 PLLLEILVEVMDPGFVCSKIGVC 514
Score = 46.6 bits (109), Expect(2) = 3e-20
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 5/200 (2%)
Frame = +1
Query: 229 DICKDVITAAGDM---LKDNATE-QEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILD 396
D+C+D + D+ +K N++ Q + +++ CD L P +S CK VD Y V +
Sbjct: 195 DVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLG-PGVSDICKNYVDQYSEVCVQ 253
Query: 397 MIKGQMSKPGEVCSALNLCESLQK-HLAELTQQKQLESNQIPELDLAEAVAPFMANIPLL 573
M+ +P E+C C +++ + L + N +P L++ + P+ N+
Sbjct: 254 MLMHMDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMD---PYEQNLV-- 308
Query: 574 LYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMA 753
+ +CQ C Q V + + + N+ E LV C L
Sbjct: 309 ------------QAHNVILCQTC-QFVMNKFSELIVNNATEELLVKGLSNACALLPDPAR 355
Query: 754 DMCKNYISQYSEIAIQMMMH 813
C+ + + + + +H
Sbjct: 356 TKCQEVVGTFGPSLLDIFIH 375
Score = 78.2 bits (191), Expect = 2e-14
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 42/217 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKL-PTSMSEECQELVDTYGS 1141
P ++ C++C+ VV E L+ +N T+EEI+H L+K C + +S+S C+E+VD+Y
Sbjct: 56 PTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLP 115
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST-------------------------------QGLP 1225
IL ++ E S P VCS L+LC + +P
Sbjct: 116 VILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIP 175
Query: 1226 VL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPDP 1381
+L ++ P + C+ C +LVS + ++ NS+ Q + +++ C L
Sbjct: 176 LLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG 235
Query: 1382 YQKQCDQFVTEYEPVLVEILVEV-MEPSFVCSKIGAC 1489
C +V +Y V V++L+ + +P +C G C
Sbjct: 236 VSDICKNYVDQYSEVCVQMLMHMDQQPKEICVLAGFC 272
Score = 65.9 bits (159), Expect = 1e-10
Identities = 44/197 (22%), Positives = 93/197 (47%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C C+ V+ +++ +NATE+ ++ L C LP P C+E+V ++ P +LD+
Sbjct: 316 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP-ARTKCQEVVGTFGPSLLDIFI 374
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
+++ P +C + LC + EL + + + I L E P P Q
Sbjct: 375 HEVN-PSSLCGVIGLCAA----RPELVEALEQPAPAIVSALLKEPTPPKQPAQP----KQ 425
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
+ P+ +G C+ C ++V L++ + NST E ++ ++ C L C
Sbjct: 426 SALPAHVPPQKNGGFCEVCKKLVLYLEHNLEKNST-KEEILAALEKGCSFLPDPYQKQCD 484
Query: 766 NYISQYSEIAIQMMMHM 816
+++++Y + +++++ +
Sbjct: 485 DFVAEYEPLLLEILVEV 501
Score = 60.1 bits (144), Expect = 5e-09
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +2
Query: 1058 IHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPELVCSMLHLCSTQGLPVLTA 1237
++AL S L T+++ Q+ G S ++L ++ + C + C TA
Sbjct: 1 MYALALFASLLATALTSPVQDPKTCSGGS--AVLCRDVKTAVDCGAVKHCQQMVWSKPTA 58
Query: 1238 RVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPD-PYQKQCDQFVTE 1414
+ P C++CK +V+ L+ N+T++EIL LEK C ++ D C + V
Sbjct: 59 KSLP------CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDS 112
Query: 1415 YEPVLVEILV-EVMEPSFVCSKIGACPSAHKPL 1510
Y PV+++++ E+ P VCS + C S + L
Sbjct: 113 YLPVILDMIKGEMSNPGEVCSALNLCQSLQEYL 145
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T++EIL LE+ C +LP P C + V Y P++L+++
Sbjct: 441 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDP-YQKQCDDFVAEYEPLLLEILV 499
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ PG VCS + +C S K L
Sbjct: 500 -EVMDPGFVCSKIGVCPSAYKLL 521
>ref|NP_001139595.1| sulfated glycoprotein 1 isoform E preproprotein [Mus musculus].
Length = 545
Score = 343 bits (879), Expect(2) = 0.0
Identities = 154/228 (67%), Positives = 199/228 (87%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ C+ GSAV C++VKTA DCGA++HC Q VW+KPT KSLPCDICK V+T AG++LKDNAT
Sbjct: 23 KTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
++EIL YLE+TC+W+ ++SA+CKE+VDSY PVILDMIKG+MS PGEVCSALNLC+SLQ
Sbjct: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
++LAE QKQLESN+IPE+D+A VAPFM+NIPLLLYPQD S+P+PKA+ DVCQDC+
Sbjct: 143 EYLAE-QNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCM 201
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSE 789
++V+D+Q AV+TNS+F++ V+H KE+CDRLGPG++D+CKNY+ QYSE
Sbjct: 202 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSE 249
Score = 339 bits (869), Expect(2) = 0.0
Identities = 162/296 (54%), Positives = 205/296 (69%), Gaps = 31/296 (10%)
Frame = +2
Query: 821 QPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVCE 1000
QPK+IC L GFC EVK VPM+TLVPA + ++ ALE+++P +++LV I C+ C+
Sbjct: 250 QPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQ 309
Query: 1001 FVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPE 1180
FV+ + ++LI NN TEE ++ L C+ LP +CQE+V T+G S+L + + E +P
Sbjct: 310 FVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPS 369
Query: 1181 LVCSMLHLCST---------QGLPV----------------------LTARVTPLKDGGF 1267
+C ++ LC+ Q P L A V P K+GGF
Sbjct: 370 SLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQPAQPKQSALPAHVPPQKNGGF 429
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILVE 1447
CEVCK+LV YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQCD FV EYEP+L+EILVE
Sbjct: 430 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVE 489
Query: 1448 VMEPSFVCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
VM+P FVCSKIG CPSA+K LLGTEKCVWGPS+WCQNME+AA CNAV+HC+RHVWN
Sbjct: 490 VMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVWN 545
Score = 71.6 bits (174), Expect = 2e-12
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEP-------------IKKD 958
+ P +CG++G C E+ PA ++SAL L EP +
Sbjct: 366 VNPSSLCGVIGLCAARPELVEALEQPAPA----IVSAL-LKEPTPPKQPAQPKQSALPAH 420
Query: 959 LVPEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYG 1138
+ P+K +CEVC+ +V + ++ N T+EEI+ AL+K CS LP ++C + V Y
Sbjct: 421 VPPQKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYE 480
Query: 1139 SSILSLLLQEASPELVCSMLHLC 1207
+L +L++ P VCS + +C
Sbjct: 481 PLLLEILVEVMDPGFVCSKIGVC 503
Score = 68.6 bits (166), Expect = 2e-11
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 41/201 (20%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKL-PTSMSEECQELVDTYGS 1141
P ++ C++C+ VV E L+ +N T+EEI+H L+K C + +S+S C+E+VD+Y
Sbjct: 56 PTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLP 115
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST-------------------------------QGLP 1225
IL ++ E S P VCS L+LC + +P
Sbjct: 116 VILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIP 175
Query: 1226 VL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPDP 1381
+L ++ P + C+ C +LVS + ++ NS+ Q + +++ C L
Sbjct: 176 LLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG 235
Query: 1382 YQKQCDQFVTEYEPVLVEILV 1444
C +V +Y EI V
Sbjct: 236 VSDICKNYVDQYSEQPKEICV 256
Score = 65.9 bits (159), Expect = 1e-10
Identities = 44/197 (22%), Positives = 93/197 (47%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C C+ V+ +++ +NATE+ ++ L C LP P C+E+V ++ P +LD+
Sbjct: 305 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP-ARTKCQEVVGTFGPSLLDIFI 363
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
+++ P +C + LC + EL + + + I L E P P Q
Sbjct: 364 HEVN-PSSLCGVIGLCAA----RPELVEALEQPAPAIVSALLKEPTPPKQPAQP----KQ 414
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
+ P+ +G C+ C ++V L++ + NST E ++ ++ C L C
Sbjct: 415 SALPAHVPPQKNGGFCEVCKKLVLYLEHNLEKNST-KEEILAALEKGCSFLPDPYQKQCD 473
Query: 766 NYISQYSEIAIQMMMHM 816
+++++Y + +++++ +
Sbjct: 474 DFVAEYEPLLLEILVEV 490
Score = 60.1 bits (144), Expect = 5e-09
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +2
Query: 1058 IHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPELVCSMLHLCSTQGLPVLTA 1237
++AL S L T+++ Q+ G S ++L ++ + C + C TA
Sbjct: 1 MYALALFASLLATALTSPVQDPKTCSGGS--AVLCRDVKTAVDCGAVKHCQQMVWSKPTA 58
Query: 1238 RVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPD-PYQKQCDQFVTE 1414
+ P C++CK +V+ L+ N+T++EIL LEK C ++ D C + V
Sbjct: 59 KSLP------CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDS 112
Query: 1415 YEPVLVEILV-EVMEPSFVCSKIGACPSAHKPL 1510
Y PV+++++ E+ P VCS + C S + L
Sbjct: 113 YLPVILDMIKGEMSNPGEVCSALNLCQSLQEYL 145
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T++EIL LE+ C +LP P C + V Y P++L+++
Sbjct: 430 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDP-YQKQCDDFVAEYEPLLLEILV 488
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ PG VCS + +C S K L
Sbjct: 489 -EVMDPGFVCSKIGVCPSAYKLL 510
>ref|NP_780458.2| proactivator polypeptide-like 1 [Mus musculus].
Length = 525
Score = 204 bits (518), Expect(2) = e-106
Identities = 108/284 (38%), Positives = 166/284 (58%), Gaps = 9/284 (3%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+ P+++C GFCE + +V + + +LE+ P +L + + C+VC
Sbjct: 248 LPPQEVCRKGGFCERESAHWL-----TRVAAVDGVPSLEMEMPRTNELQMQLG-LTCDVC 301
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
+V+E+ K + N TE I H L++VC+ +P + ++C LVDTY ++ L+ + +P
Sbjct: 302 LNLVQELDKWLVTNSTEALISHTLERVCTVVPEPLVQQCITLVDTYSPELVQLM-SKVTP 360
Query: 1178 ELVCSMLHLCSTQ------GLPVLTARVTPLKD---GGFCEVCKRLVSYLDRNLEKNSTK 1330
E VC + LC ++ V T P+ + G FC+ CKRL+ +NL+ STK
Sbjct: 361 EKVCETIKLCGSKRRARSISRAVATTPSLPVDEENQGSFCQGCKRLLGMSSQNLDHKSTK 420
Query: 1331 QEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPL 1510
++IL A + GC LP PY QC++FV EYEPVL+E L +M P+ +C K+GAC PL
Sbjct: 421 RDILNAFKGGCRILPLPYVMQCNRFVAEYEPVLIESLKFMMNPTDLCKKMGACHGPKTPL 480
Query: 1511 LGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN*KARSILEK 1642
LGT++CV GPSFWC++ E+A +CNA+EHC+R VW I E+
Sbjct: 481 LGTDQCVMGPSFWCKSPEAAEMCNALEHCQRLVWKKPVSKINEQ 524
Score = 200 bits (509), Expect(2) = e-106
Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 1/242 (0%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
REC +GS VWCQ+++ A+ C A++HC VWNKPTVKSLPC +C+DV AAG+ + AT
Sbjct: 27 RECAKGSEVWCQDLQAAAKCRAVRHCQSAVWNKPTVKSLPCSVCQDVAAAAGNGVNPGAT 86
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKG-QMSKPGEVCSALNLCESL 462
E +IL + +TC+WLP SA CK +V+++ +L M+ G Q + VC+AL LCE L
Sbjct: 87 ESDILTSVMKTCEWLPSQESSAKCKWMVNNHSAAVLSMLSGAQETDLASVCTALTLCEPL 146
Query: 463 QKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDC 642
Q+HLAE T ++ L D E +APF++N L +P S P +G VC DC
Sbjct: 147 QRHLAETTSERPLTQE-----DANEVMAPFLSNGALSFHP----SQMP----EGAVCHDC 193
Query: 643 IQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHP 822
+Q+++ LQ+A+ +N T E V + +C +GPG+A +C+NYI + A Q + + P
Sbjct: 194 VQLISLLQDALESNLTLAEVTV---QNQCQSMGPGLAALCENYIHRQFVPAKQTLQGLPP 250
Query: 823 TQ 828
+
Sbjct: 251 QE 252
Score = 59.3 bits (142), Expect = 9e-09
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPT-SMSEECQELVDTYGS 1141
P ++ C VC+ V ++ TE +I+ ++ K C LP+ S +C+ +V+ + +
Sbjct: 60 PTVKSLPCSVCQDVAAAAGNGVNPGATESDILTSVMKTCEWLPSQESSAKCKWMVNNHSA 119
Query: 1142 SILSLL--LQEASPELVCSMLHLC---------STQGLPV-----------------LTA 1237
++LS+L QE VC+ L LC +T P+ L+
Sbjct: 120 AVLSMLSGAQETDLASVCTALTLCEPLQRHLAETTSERPLTQEDANEVMAPFLSNGALSF 179
Query: 1238 RVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEY 1417
+ + +G C C +L+S L LE N T E+ ++ C + C+ ++
Sbjct: 180 HPSQMPEGAVCHDCVQLISLLQDALESNLTLAEV--TVQNQCQSMGPGLAALCENYI-HR 236
Query: 1418 EPVLVEILVEVMEPSFVCSKIGAC--PSAH 1501
+ V + ++ + P VC K G C SAH
Sbjct: 237 QFVPAKQTLQGLPPQEVCRKGGFCERESAH 266
Score = 59.3 bits (142), Expect = 9e-09
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 3/241 (1%)
Frame = +1
Query: 112 CTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATEQ 291
C R SA W V +L+ + L CD+C +++ L N+TE
Sbjct: 260 CERESAHWLTRVAAVDGVPSLEMEMPRTNELQMQLGLTCDVCLNLVQELDKWLVTNSTEA 319
Query: 292 EILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSK--PGEVCSALNLCESLQ 465
I LER C +P+P + C +VD+Y P ++ + MSK P +VC + LC S +
Sbjct: 320 LISHTLERVCTVVPEP-LVQQCITLVDTYSPELVQL----MSKVTPEKVCETIKLCGSKR 374
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
+ A +++ +A P L ++ G CQ C
Sbjct: 375 R---------------------ARSISRAVATTPSLPVDEEN---------QGSFCQGCK 404
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQ-MMMHMHP 822
+++ + ST ++N K C L C ++++Y + I+ + M+P
Sbjct: 405 RLLGMSSQNLDHKST-KRDILNAFKGGCRILPLPYVMQCNRFVAEYEPVLIESLKFMMNP 463
Query: 823 T 825
T
Sbjct: 464 T 464
>ref|NP_001139596.1| sulfated glycoprotein 1 isoform F preproprotein [Mus musculus].
Length = 551
Score = 361 bits (926), Expect = 1e-99
Identities = 162/248 (65%), Positives = 213/248 (85%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ C+ GSAV C++VKTA DCGA++HC Q VW+KPT KSLPCDICK V+T AG++LKDNAT
Sbjct: 20 KTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNAT 79
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
++EIL YLE+TC+W+ ++SA+CKE+VDSY PVILDMIKG+MS PGEVCSALNLC+SLQ
Sbjct: 80 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQ 139
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
++LAE QKQLESN+IPE+D+A VAPFM+NIPLLLYPQD S+P+PKA+ DVCQDC+
Sbjct: 140 EYLAE-QNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCM 198
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
++V+D+Q AV+TNS+F++ V+H KE+CDRLGPG++D+CKNY+ QYSE+ +QM+MHM P
Sbjct: 199 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQPK 258
Query: 826 QGHLWAGW 849
+ + AG+
Sbjct: 259 EICVLAGF 266
Score = 339 bits (870), Expect = 4e-93
Identities = 162/297 (54%), Positives = 206/297 (69%), Gaps = 31/297 (10%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPK+IC L GFC EVK VPM+TLVPA + ++ ALE+++P +++LV I C+ C
Sbjct: 255 MQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTC 314
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
+FV+ + ++LI NN TEE ++ L C+ LP +CQE+V T+G S+L + + E +P
Sbjct: 315 QFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNP 374
Query: 1178 ELVCSMLHLCST---------QGLPV----------------------LTARVTPLKDGG 1264
+C ++ LC+ Q P L A V P K+GG
Sbjct: 375 SSLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQPAQPKQSALPAHVPPQKNGG 434
Query: 1265 FCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILV 1444
FCEVCK+LV YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQCD FV EYEP+L+EILV
Sbjct: 435 FCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILV 494
Query: 1445 EVMEPSFVCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
EVM+P FVCSKIG CPSA+K LLGTEKCVWGPS+WCQNME+AA CNAV+HC+RHVWN
Sbjct: 495 EVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVWN 551
Score = 79.7 bits (195), Expect = 7e-15
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKL-PTSMSEECQELVDTYGS 1141
P ++ C++C+ VV E L+ +N T+EEI+H L+K C + +S+S C+E+VD+Y
Sbjct: 53 PTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLP 112
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST-------------------------------QGLP 1225
IL ++ E S P VCS L+LC + +P
Sbjct: 113 VILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIP 172
Query: 1226 VL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPDP 1381
+L ++ P + C+ C +LVS + ++ NS+ Q + +++ C L
Sbjct: 173 LLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG 232
Query: 1382 YQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGAC 1489
C +V +Y V V++L+ M+P +C G C
Sbjct: 233 VSDICKNYVDQYSEVCVQMLMH-MQPKEICVLAGFC 267
Score = 65.9 bits (159), Expect = 1e-10
Identities = 44/197 (22%), Positives = 93/197 (47%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C C+ V+ +++ +NATE+ ++ L C LP P C+E+V ++ P +LD+
Sbjct: 311 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP-ARTKCQEVVGTFGPSLLDIFI 369
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
+++ P +C + LC + EL + + + I L E P P Q
Sbjct: 370 HEVN-PSSLCGVIGLCAA----RPELVEALEQPAPAIVSALLKEPTPPKQPAQP----KQ 420
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
+ P+ +G C+ C ++V L++ + NST E ++ ++ C L C
Sbjct: 421 SALPAHVPPQKNGGFCEVCKKLVLYLEHNLEKNST-KEEILAALEKGCSFLPDPYQKQCD 479
Query: 766 NYISQYSEIAIQMMMHM 816
+++++Y + +++++ +
Sbjct: 480 DFVAEYEPLLLEILVEV 496
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T++EIL LE+ C +LP P C + V Y P++L+++
Sbjct: 436 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDP-YQKQCDDFVAEYEPLLLEILV 494
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ PG VCS + +C S K L
Sbjct: 495 -EVMDPGFVCSKIGVCPSAYKLL 516
Score = 55.1 bits (131), Expect = 2e-07
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +2
Query: 1151 SLLLQEASPELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTK 1330
++L ++ + C + C TA+ P C++CK +V+ L+ N+T+
Sbjct: 27 AVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLP------CDICKTVVTEAGNLLKDNATQ 80
Query: 1331 QEILAALEKGCSFLPD-PYQKQCDQFVTEYEPVLVEILV-EVMEPSFVCSKIGACPSAHK 1504
+EIL LEK C ++ D C + V Y PV+++++ E+ P VCS + C S +
Sbjct: 81 EEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQE 140
Query: 1505 PL 1510
L
Sbjct: 141 YL 142
>ref|NP_001139594.1| sulfated glycoprotein 1 isoform D preproprotein [Mus musculus].
Length = 553
Score = 361 bits (926), Expect = 1e-99
Identities = 162/248 (65%), Positives = 213/248 (85%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ C+ GSAV C++VKTA DCGA++HC Q VW+KPT KSLPCDICK V+T AG++LKDNAT
Sbjct: 23 KTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
++EIL YLE+TC+W+ ++SA+CKE+VDSY PVILDMIKG+MS PGEVCSALNLC+SLQ
Sbjct: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
++LAE QKQLESN+IPE+D+A VAPFM+NIPLLLYPQD S+P+PKA+ DVCQDC+
Sbjct: 143 EYLAE-QNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCM 201
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
++V+D+Q AV+TNS+F++ V+H KE+CDRLGPG++D+CKNY+ QYSE+ +QM+MHM P
Sbjct: 202 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQPK 261
Query: 826 QGHLWAGW 849
+ + AG+
Sbjct: 262 EICVLAGF 269
Score = 334 bits (857), Expect = 1e-91
Identities = 162/297 (54%), Positives = 205/297 (69%), Gaps = 31/297 (10%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPK+IC L GFC EVK VPM+TLVPA + ++ ALE+++P + +LV I C+ C
Sbjct: 258 MQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYE-NLVQAHNVILCQTC 316
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
+FV+ + ++LI NN TEE ++ L C+ LP +CQE+V T+G S+L + + E +P
Sbjct: 317 QFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNP 376
Query: 1178 ELVCSMLHLCST---------QGLPV----------------------LTARVTPLKDGG 1264
+C ++ LC+ Q P L A V P K+GG
Sbjct: 377 SSLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQPAQPKQSALPAHVPPQKNGG 436
Query: 1265 FCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILV 1444
FCEVCK+LV YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQCD FV EYEP+L+EILV
Sbjct: 437 FCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILV 496
Query: 1445 EVMEPSFVCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
EVM+P FVCSKIG CPSA+K LLGTEKCVWGPS+WCQNME+AA CNAV+HC+RHVWN
Sbjct: 497 EVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVWN 553
Score = 79.7 bits (195), Expect = 7e-15
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKL-PTSMSEECQELVDTYGS 1141
P ++ C++C+ VV E L+ +N T+EEI+H L+K C + +S+S C+E+VD+Y
Sbjct: 56 PTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLP 115
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST-------------------------------QGLP 1225
IL ++ E S P VCS L+LC + +P
Sbjct: 116 VILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIP 175
Query: 1226 VL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPDP 1381
+L ++ P + C+ C +LVS + ++ NS+ Q + +++ C L
Sbjct: 176 LLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG 235
Query: 1382 YQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGAC 1489
C +V +Y V V++L+ M+P +C G C
Sbjct: 236 VSDICKNYVDQYSEVCVQMLMH-MQPKEICVLAGFC 270
Score = 65.9 bits (159), Expect = 1e-10
Identities = 44/197 (22%), Positives = 93/197 (47%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C C+ V+ +++ +NATE+ ++ L C LP P C+E+V ++ P +LD+
Sbjct: 313 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP-ARTKCQEVVGTFGPSLLDIFI 371
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
+++ P +C + LC + EL + + + I L E P P Q
Sbjct: 372 HEVN-PSSLCGVIGLCAA----RPELVEALEQPAPAIVSALLKEPTPPKQPAQP----KQ 422
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
+ P+ +G C+ C ++V L++ + NST E ++ ++ C L C
Sbjct: 423 SALPAHVPPQKNGGFCEVCKKLVLYLEHNLEKNST-KEEILAALEKGCSFLPDPYQKQCD 481
Query: 766 NYISQYSEIAIQMMMHM 816
+++++Y + +++++ +
Sbjct: 482 DFVAEYEPLLLEILVEV 498
Score = 60.1 bits (144), Expect = 5e-09
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +2
Query: 1058 IHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPELVCSMLHLCSTQGLPVLTA 1237
++AL S L T+++ Q+ G S ++L ++ + C + C TA
Sbjct: 1 MYALALFASLLATALTSPVQDPKTCSGGS--AVLCRDVKTAVDCGAVKHCQQMVWSKPTA 58
Query: 1238 RVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPD-PYQKQCDQFVTE 1414
+ P C++CK +V+ L+ N+T++EIL LEK C ++ D C + V
Sbjct: 59 KSLP------CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDS 112
Query: 1415 YEPVLVEILV-EVMEPSFVCSKIGACPSAHKPL 1510
Y PV+++++ E+ P VCS + C S + L
Sbjct: 113 YLPVILDMIKGEMSNPGEVCSALNLCQSLQEYL 145
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T++EIL LE+ C +LP P C + V Y P++L+++
Sbjct: 438 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDP-YQKQCDDFVAEYEPLLLEILV 496
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ PG VCS + +C S K L
Sbjct: 497 -EVMDPGFVCSKIGVCPSAYKLL 518
>ref|NP_001139592.1| sulfated glycoprotein 1 isoform A preproprotein [Mus musculus].
Length = 554
Score = 361 bits (926), Expect = 1e-99
Identities = 162/248 (65%), Positives = 213/248 (85%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ C+ GSAV C++VKTA DCGA++HC Q VW+KPT KSLPCDICK V+T AG++LKDNAT
Sbjct: 23 KTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
++EIL YLE+TC+W+ ++SA+CKE+VDSY PVILDMIKG+MS PGEVCSALNLC+SLQ
Sbjct: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
++LAE QKQLESN+IPE+D+A VAPFM+NIPLLLYPQD S+P+PKA+ DVCQDC+
Sbjct: 143 EYLAE-QNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCM 201
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
++V+D+Q AV+TNS+F++ V+H KE+CDRLGPG++D+CKNY+ QYSE+ +QM+MHM P
Sbjct: 202 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQPK 261
Query: 826 QGHLWAGW 849
+ + AG+
Sbjct: 262 EICVLAGF 269
Score = 339 bits (870), Expect = 4e-93
Identities = 162/297 (54%), Positives = 206/297 (69%), Gaps = 31/297 (10%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPK+IC L GFC EVK VPM+TLVPA + ++ ALE+++P +++LV I C+ C
Sbjct: 258 MQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTC 317
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
+FV+ + ++LI NN TEE ++ L C+ LP +CQE+V T+G S+L + + E +P
Sbjct: 318 QFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNP 377
Query: 1178 ELVCSMLHLCST---------QGLPV----------------------LTARVTPLKDGG 1264
+C ++ LC+ Q P L A V P K+GG
Sbjct: 378 SSLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQPAQPKQSALPAHVPPQKNGG 437
Query: 1265 FCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILV 1444
FCEVCK+LV YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQCD FV EYEP+L+EILV
Sbjct: 438 FCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILV 497
Query: 1445 EVMEPSFVCSKIGACPSAHKPLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
EVM+P FVCSKIG CPSA+K LLGTEKCVWGPS+WCQNME+AA CNAV+HC+RHVWN
Sbjct: 498 EVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVWN 554
Score = 79.7 bits (195), Expect = 7e-15
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKL-PTSMSEECQELVDTYGS 1141
P ++ C++C+ VV E L+ +N T+EEI+H L+K C + +S+S C+E+VD+Y
Sbjct: 56 PTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLP 115
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST-------------------------------QGLP 1225
IL ++ E S P VCS L+LC + +P
Sbjct: 116 VILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIP 175
Query: 1226 VL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPDP 1381
+L ++ P + C+ C +LVS + ++ NS+ Q + +++ C L
Sbjct: 176 LLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG 235
Query: 1382 YQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGAC 1489
C +V +Y V V++L+ M+P +C G C
Sbjct: 236 VSDICKNYVDQYSEVCVQMLMH-MQPKEICVLAGFC 270
Score = 65.9 bits (159), Expect = 1e-10
Identities = 44/197 (22%), Positives = 93/197 (47%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C C+ V+ +++ +NATE+ ++ L C LP P C+E+V ++ P +LD+
Sbjct: 314 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP-ARTKCQEVVGTFGPSLLDIFI 372
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
+++ P +C + LC + EL + + + I L E P P Q
Sbjct: 373 HEVN-PSSLCGVIGLCAA----RPELVEALEQPAPAIVSALLKEPTPPKQPAQP----KQ 423
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
+ P+ +G C+ C ++V L++ + NST E ++ ++ C L C
Sbjct: 424 SALPAHVPPQKNGGFCEVCKKLVLYLEHNLEKNST-KEEILAALEKGCSFLPDPYQKQCD 482
Query: 766 NYISQYSEIAIQMMMHM 816
+++++Y + +++++ +
Sbjct: 483 DFVAEYEPLLLEILVEV 499
Score = 60.1 bits (144), Expect = 5e-09
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +2
Query: 1058 IHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPELVCSMLHLCSTQGLPVLTA 1237
++AL S L T+++ Q+ G S ++L ++ + C + C TA
Sbjct: 1 MYALALFASLLATALTSPVQDPKTCSGGS--AVLCRDVKTAVDCGAVKHCQQMVWSKPTA 58
Query: 1238 RVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPD-PYQKQCDQFVTE 1414
+ P C++CK +V+ L+ N+T++EIL LEK C ++ D C + V
Sbjct: 59 KSLP------CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDS 112
Query: 1415 YEPVLVEILV-EVMEPSFVCSKIGACPSAHKPL 1510
Y PV+++++ E+ P VCS + C S + L
Sbjct: 113 YLPVILDMIKGEMSNPGEVCSALNLCQSLQEYL 145
Score = 58.5 bits (140), Expect = 2e-08
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T++EIL LE+ C +LP P C + V Y P++L+++
Sbjct: 439 CEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDP-YQKQCDDFVAEYEPLLLEILV 497
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ PG VCS + +C S K L
Sbjct: 498 -EVMDPGFVCSKIGVCPSAYKLL 519
>ref|NP_680088.1| pulmonary surfactant-associated protein B precursor [Mus musculus].
Length = 377
Score = 90.5 bits (223), Expect = 4e-18
Identities = 40/115 (34%), Positives = 67/115 (58%)
Frame = +1
Query: 109 ECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATE 288
EC +G WCQ+++ A C AL HCLQ VW L C C+D++ M K++A +
Sbjct: 30 ECAQGPQFWCQSLEHAVQCRALGHCLQEVWGHAGANDL-CQECEDIVHLLTKMTKEDAFQ 88
Query: 289 QEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLC 453
+ I +LE+ CD LP + C++++D Y P+++D + Q++ P +C+ + LC
Sbjct: 89 EAIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYFQSQIN-PKAICNHVGLC 142
Score = 80.1 bits (196), Expect = 5e-15
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQT-----LVPAKVLSEKVI-----SALELVEPIKKDLVP 967
I PK IC VG C + P Q VP +L + V+ + L P +D
Sbjct: 130 INPKAICNHVGLCPRGQAKPEQNPGMPDAVPNPLLDKLVLPVLPGALLARPGPHTQDFSE 189
Query: 968 EKATI---YCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYG 1138
++ I +C +C ++K V +I + A+ +VC +P + CQ L + Y
Sbjct: 190 QQLPIPLPFCWLCRTLIKRVQAVIPKG----VLAVAVSQVCHVVPLVVGGICQCLAERYT 245
Query: 1139 SSILSLLLQEASPELVCSMLHLCSTQ-----GLPVLTARVT--PLKDGGFCEVCKRLVSY 1297
+L LL P+LVC ++ CST+ LP + + PL+D C CK ++
Sbjct: 246 VLLLDALLGRVVPQLVCGLVLRCSTEDAMGPALPAVEPLIEEWPLQDTE-CHFCKSVI-- 302
Query: 1298 LDRNLEKNSTKQEILAALEKGC-SFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCS 1474
N N+++Q + A+ + C F D +++C+QFV ++ P L+ ++ + C
Sbjct: 303 ---NQAWNTSEQAMPQAMHQACLRFWLD--RQKCEQFVEQHMPQLLALVPRSQDAHITCQ 357
Query: 1475 KIGACPSAHKPL 1510
+G C + PL
Sbjct: 358 ALGVCEAPASPL 369
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 59,922,730
Number of extensions: 1681242
Number of successful extensions: 7969
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 7770
Number of HSP's successfully gapped: 46
Length of query: 592
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 485
Effective length of database: 12,403,707
Effective search space: 6015797895
Effective search space used: 6015797895
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007726
(1777 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001185848.1| proactivator polypeptide [Sus scrofa]. 542 0.0
Alignment gi|XP_003356899.1| PREDICTED: proactivator polypeptide-like 1-l... 217 1e-56
Alignment gi|XP_003355745.1| PREDICTED: proactivator polypeptide-like 1-l... 179 7e-46
Alignment gi|NP_001096149.1| pulmonary surfactant-associated protein B [S... 80 3e-15
>ref|NP_001185848.1| proactivator polypeptide [Sus scrofa].
Length = 524
Score = 542 bits (1397), Expect(2) = 0.0
Identities = 263/266 (98%), Positives = 266/266 (100%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVI+ALELVEPIKKDLVPEKATIYCEVC
Sbjct: 259 MQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVITALELVEPIKKDLVPEKATIYCEVC 318
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP
Sbjct: 319 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 378
Query: 1178 ELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEK 1357
ELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEK
Sbjct: 379 ELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEK 438
Query: 1358 GCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWG 1537
GCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWG
Sbjct: 439 GCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWG 498
Query: 1538 PSFWCQNMESAALCNAVEHCRRHVWN 1615
PSFWCQNMESAALCNAVEHC+RHVWN
Sbjct: 499 PSFWCQNMESAALCNAVEHCKRHVWN 524
Score = 493 bits (1270), Expect(2) = 0.0
Identities = 238/239 (99%), Positives = 238/239 (99%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT
Sbjct: 23 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ
Sbjct: 83 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI
Sbjct: 143 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 202
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHP 822
QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHM P
Sbjct: 203 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMQP 261
Score = 79.7 bits (195), Expect = 5e-15
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 42/217 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLP-TSMSEECQELVDTYGS 1141
P ++ C++C+ V+ ++ +N TE+EI+ L++ C LP +MS C+E+VD+Y
Sbjct: 56 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFP 115
Query: 1142 SILSLLL-QEASPELVCSMLHLCST--------------------------------QGL 1222
IL ++ Q + P VCS L+LC + +
Sbjct: 116 VILDMIKGQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANI 175
Query: 1223 PVL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILA-ALEKGCSFLPD 1378
P+L +++ P DG C+ C ++V+ L + NST E L ++ C L
Sbjct: 176 PLLLYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGP 235
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGAC 1489
C ++++Y + +++++ M+P +C +G C
Sbjct: 236 GMADMCKNYISQYSEIAIQMMMH-MQPKDICGLVGFC 271
Score = 70.5 bits (171), Expect = 3e-12
Identities = 48/204 (23%), Positives = 93/204 (45%)
Frame = +1
Query: 205 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFP 384
P ++ C++C+ V+ ++ +N TE+EI+ L++ C LP +MS C+E+VD+Y
Sbjct: 308 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLP-TSMSEECQELVDTYGS 366
Query: 385 VILDMIKGQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANI 564
IL ++ Q + P VCS L+LC + +
Sbjct: 367 SILSLLL-QEASPELVCSMLHLCST--------------------------------QGL 393
Query: 565 PLLLYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGP 744
P+L +++ P DG C+ C ++V+ L + NST E L ++ C L
Sbjct: 394 PVL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILA-ALEKGCSFLPD 445
Query: 745 GMADMCKNYISQYSEIAIQMMMHM 816
C ++++Y + +++++ +
Sbjct: 446 PYQKQCDQFVTEYEPVLVEILVEV 469
Score = 58.9 bits (141), Expect = 9e-09
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 63 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 122
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
++ +P VCS + C S K L
Sbjct: 123 GQMSKPGEVCSALNLCESLQKHL 145
Score = 58.9 bits (141), Expect = 9e-09
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK +++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 409 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 467
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ +P VCS + C S K L
Sbjct: 468 -EVMEPSFVCSKIGACPSAHKPL 489
Score = 56.2 bits (134), Expect = 6e-08
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Frame = +1
Query: 229 DICKDVITAAGDM---LKDNATEQEILV-YLERTCDWLPKPNMSATCKEIVDSYFPVILD 396
D+C+D I D+ ++ N+T E LV + + CD L P M+ CK + Y + +
Sbjct: 196 DVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLG-PGMADMCKNYISQYSEIAIQ 254
Query: 397 MIKGQMSKPGEVCSALNLCESLQK-HLAELTQQKQLESNQIPELDLAEAVAPFMANIPLL 573
M+ +P ++C + CE +++ + L K L I L+L E + +
Sbjct: 255 MM--MHMQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVITALELVEPIKKDLVPEKAT 312
Query: 574 LYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMA 753
+Y C+ C +V ++ + N T E +++ + C +L M+
Sbjct: 313 IY-----------------CEVCEFVVKEVAKLIDNNRT-EEEIIHALDKVCSKLPTSMS 354
Query: 754 DMCKNYISQYSEIAIQM------------MMHMHPTQG 831
+ C+ + Y + + M+H+ TQG
Sbjct: 355 EECQELVDTYGSSILSLLLQEASPELVCSMLHLCSTQG 392
Score = 48.9 bits (115), Expect = 9e-06
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +2
Query: 1505 PLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
P+LG +C G + WCQN+++A+ C A++HC + VWN
Sbjct: 18 PVLGLRECTRGSAVWCQNVKTASDCGALQHCLQTVWN 54
>ref|XP_003356899.1| PREDICTED: proactivator polypeptide-like 1-like [Sus scrofa].
Length = 492
Score = 217 bits (553), Expect = 1e-56
Identities = 109/274 (39%), Positives = 169/274 (61%), Gaps = 9/274 (3%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+ P ++C GFCEE++ A V S + +LEL P ++ + +A + C+VC
Sbjct: 217 VPPHEVCKKGGFCEELEGRGRL----AHVASVDRVPSLELASPRQEKELQMEAGVICDVC 272
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
VV+++ +++N T+ IIHALD++CS LP + EC LVD Y ++L LL + +P
Sbjct: 273 LQVVQKLGHWLESNSTQAIIIHALDRLCSALPAPLVRECVTLVDAYSPTLLELLTR-VTP 331
Query: 1178 ELVCSMLHLCS----TQGLPVLTARVTPL-----KDGGFCEVCKRLVSYLDRNLEKNSTK 1330
+ +C+ + CS + +P A + P + G FC C+RL+ RNLE+ ST+
Sbjct: 332 KKLCTAIWPCSRRRWARDVPEPPATLLPPLLDKERHGAFCNGCRRLLDLSARNLEQRSTR 391
Query: 1331 QEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPL 1510
Q +L + GCS LP Y QC++FVTEY+P+ +E L ++++P +C+K+GAC L
Sbjct: 392 QVLLRTFKGGCSILPLTYMTQCNRFVTEYQPLFIETLRDILDPMTLCTKMGACHRPRTAL 451
Query: 1511 LGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVW 1612
LGT++CV GPSFWC++ E+A +CNAVEHC+RHVW
Sbjct: 452 LGTDQCVMGPSFWCESPETAEMCNAVEHCQRHVW 485
Score = 152 bits (384), Expect = 6e-37
Identities = 75/184 (40%), Positives = 112/184 (60%), Gaps = 1/184 (0%)
Frame = +1
Query: 109 ECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATE 288
EC +GS VWC++++ A+ CGA+ HC TVW++PT K+LPCD+C DV AA + L ATE
Sbjct: 25 ECAKGSVVWCRDLQVATRCGAVGHCRSTVWSQPTAKTLPCDVCLDVTAAASNGLNPEATE 84
Query: 289 QEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQM-SKPGEVCSALNLCESLQ 465
+IL + +TC+WLP+ SA C+ + +++ IL M+ G S P +VC AL LC+ LQ
Sbjct: 85 TDILALVMKTCEWLPRQGSSARCQGMAEAHGSAILSMLHGDPGSAPAQVCVALTLCQPLQ 144
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
++LA + + D ++ APFM N PL +P ++S VCQDC+
Sbjct: 145 RNLA--------APGPLSKEDTSKGEAPFMTNGPLSFHPVRTATSL--------VCQDCV 188
Query: 646 QMVT 657
++VT
Sbjct: 189 RLVT 192
Score = 50.4 bits (119), Expect = 3e-06
Identities = 45/194 (23%), Positives = 81/194 (41%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
CD+C V+ G L+ N+T+ I+ L+R C LP P + C +VD+Y P +L+++
Sbjct: 269 CDVCLQVVQKLGHWLESNSTQAIIIHALDRLCSALPAP-LVRECVTLVDAYSPTLLELL- 326
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
P ++C+A+ C ++ + +PE P +P LL
Sbjct: 327 -TRVTPKKLCTAIWPC------------SRRRWARDVPE--------PPATLLPPLL--- 362
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
K R G C C +++ DL + + L+ K C L C
Sbjct: 363 ----DKER---HGAFCNGCRRLL-DLSARNLEQRSTRQVLLRTFKGGCSILPLTYMTQCN 414
Query: 766 NYISQYSEIAIQMM 807
++++Y + I+ +
Sbjct: 415 RFVTEYQPLFIETL 428
>ref|XP_003355745.1| PREDICTED: proactivator polypeptide-like 1-like [Sus scrofa].
Length = 463
Score = 179 bits (455), Expect(2) = 7e-46
Identities = 89/226 (39%), Positives = 138/226 (61%), Gaps = 1/226 (0%)
Frame = +1
Query: 109 ECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATE 288
EC +GS VWC++++ A+ CGA+ HC TVW++PT K+LPCD+C DV AA + L ATE
Sbjct: 25 ECAKGSVVWCRDLQVATRCGAVGHCRSTVWSQPTAKTLPCDVCLDVTAAASNGLNPEATE 84
Query: 289 QEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQM-SKPGEVCSALNLCESLQ 465
+IL + +TC+WLP+ SA C+ + +++ IL M+ G S P +VC AL LC+ LQ
Sbjct: 85 TDILALVMKTCEWLPRQGSSARCQGMAEAHGSAILSMLHGDPGSAPAQVCVALTLCQPLQ 144
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
++LA + + D ++ APFM N PL +P ++S VCQDC+
Sbjct: 145 RNLA--------APGPLSKEDTSKGEAPFMTNGPLSFHPVRTATSL--------VCQDCV 188
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQY 783
++VT LQ+AV + + + + +E+C+ L P +A +CKNY+ Q+
Sbjct: 189 RLVTQLQDAVGPSLSSLAEVT--TQEQCESLEPSLASLCKNYLRQF 232
Score = 23.9 bits (50), Expect(2) = 7e-46
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEP 946
+ P ++C GFCEE++ A V S + +LEL P
Sbjct: 243 VPPHEVCKKGGFCEELEGRGRL----AHVASVDRVPSLELASP 281
>ref|NP_001096149.1| pulmonary surfactant-associated protein B [Sus scrofa].
Length = 350
Score = 80.5 bits (197), Expect = 3e-15
Identities = 37/115 (32%), Positives = 61/115 (53%)
Frame = +1
Query: 112 CTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATEQ 291
C +G WCQ+++ A C AL HCL VW L C C+D+ + M K+ +
Sbjct: 31 CDQGPEFWCQSLEQALQCQALGHCLHQVWGHAPTDDL-CQECEDIASILTKMAKEAIFQD 89
Query: 292 EILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCE 456
+ +LE+ CD LP + C ++++YFP+++D + QM+ +C L LC+
Sbjct: 90 TMRKFLEKECDVLPVKLLVPQCHHLLETYFPLVVDHFQSQMNLKA-ICKHLGLCK 143
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 44,647,143
Number of extensions: 1285122
Number of successful extensions: 6099
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 6022
Number of HSP's successfully gapped: 14
Length of query: 592
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 487
Effective length of database: 8,729,747
Effective search space: 4251386789
Effective search space used: 4251386789
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007726
(1777 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002769.1| proactivator polypeptide isoform a preproprotei... 463 0.0
Alignment gi|NP_001035930.1| proactivator polypeptide isoform b prepropro... 463 0.0
Alignment gi|NP_001035931.1| proactivator polypeptide isoform c prepropro... 463 0.0
Alignment gi|NP_001078851.1| proactivator polypeptide-like 1 [Homo sapien... 226 e-117
Alignment gi|NP_000533.3| pulmonary surfactant-associated protein B precu... 87 5e-17
Alignment gi|NP_942140.2| pulmonary surfactant-associated protein B precu... 87 5e-17
>ref|NP_002769.1| proactivator polypeptide isoform a preproprotein [Homo sapiens].
Length = 524
Score = 463 bits (1192), Expect(2) = 0.0
Identities = 217/266 (81%), Positives = 240/266 (90%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+QPK+IC LVGFC+EVKE+PMQTLVPAKV S+ VI ALELVEPIKK VP K+ +YCEVC
Sbjct: 259 MQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVYCEVC 318
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
EF+VKEV KLIDNN+TE+EI+ A DK+CSKLP S+SEECQE+VDTYGSSILS+LL+E SP
Sbjct: 319 EFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSP 378
Query: 1178 ELVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEK 1357
ELVCSMLHLCS LP LT VT KDGGFCEVCK+LV YLDRNLEKNSTKQEILAALEK
Sbjct: 379 ELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEK 438
Query: 1358 GCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWG 1537
GCSFLPDPYQKQCDQFV EYEPVL+EILVEVM+PSFVC KIGACPSAHKPLLGTEKC+WG
Sbjct: 439 GCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWG 498
Query: 1538 PSFWCQNMESAALCNAVEHCRRHVWN 1615
PS+WCQN E+AA CNAVEHC+RHVWN
Sbjct: 499 PSYWCQNTETAAQCNAVEHCKRHVWN 524
Score = 451 bits (1160), Expect(2) = 0.0
Identities = 210/241 (87%), Positives = 228/241 (94%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTASDCGA++HCLQTVWNKPTVKSLPCDICKDV+TAAGDMLKDNAT
Sbjct: 23 KECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDMLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
E+EILVYLE+TCDWLPKPNMSA+CKEIVDSY PVILD+IKG+MS+PGEVCSALNLCESLQ
Sbjct: 83 EEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCESLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAEL QKQLESN+IPELD+ E VAPFMANIPLLLYPQDG SKP+PK +GDVCQDCI
Sbjct: 143 KHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDVCQDCI 202
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
QMVTD+Q AVRTNSTFV+ALV H KEECDRLGPGMAD+CKNYISQYSEIAIQMMMHM P
Sbjct: 203 QMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMMHMQPK 262
Query: 826 Q 828
+
Sbjct: 263 E 263
Score = 79.7 bits (195), Expect = 8e-15
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 42/217 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLP-TSMSEECQELVDTYGS 1141
P ++ C++C+ VV ++ +N TEEEI+ L+K C LP +MS C+E+VD+Y
Sbjct: 56 PTVKSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLP 115
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST--------------------------------QGL 1222
IL ++ E S P VCS L+LC + +
Sbjct: 116 VILDIIKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANI 175
Query: 1223 PVL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPD 1378
P+L ++ P +G C+ C ++V+ + + NST Q ++ +++ C L
Sbjct: 176 PLLLYPQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 235
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGAC 1489
C ++++Y + +++++ M+P +C+ +G C
Sbjct: 236 GMADICKNYISQYSEIAIQMMMH-MQPKEICALVGFC 271
Score = 64.7 bits (156), Expect = 3e-10
Identities = 49/204 (24%), Positives = 91/204 (44%)
Frame = +1
Query: 205 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFP 384
P + C++C+ ++ ++ +N TE+EIL ++ C LPK ++S C+E+VD+Y
Sbjct: 308 PAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK-SLSEECQEVVDTYGS 366
Query: 385 VILDMIKGQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANI 564
IL ++ ++S P VCS L+LC ++P L +
Sbjct: 367 SILSILLEEVS-PELVCSMLHLC----------------SGTRLPALTV----------- 398
Query: 565 PLLLYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGP 744
+PK DG C+ C ++V L + NST E L ++ C L
Sbjct: 399 -----------HVTQPK-DGGFCEVCKKLVGYLDRNLEKNSTKQEILA-ALEKGCSFLPD 445
Query: 745 GMADMCKNYISQYSEIAIQMMMHM 816
C ++++Y + I++++ +
Sbjct: 446 PYQKQCDQFVAEYEPVLIEILVEV 469
Score = 61.6 bits (148), Expect = 2e-09
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +V+ L+ N+T++EIL LEK C +LP P C + V Y PV+++I+
Sbjct: 63 CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 122
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
E+ P VCS + C S K L
Sbjct: 123 GEMSRPGEVCSALNLCESLQKHL 145
Score = 55.1 bits (131), Expect = 2e-07
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 409 CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVAEYEPVLIEILV 467
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C S K L
Sbjct: 468 -EVMDPSFVCLKIGACPSAHKPL 489
Score = 50.1 bits (118), Expect = 7e-06
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 1505 PLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
P+LG ++C G + WCQN+++A+ C AV+HC + VWN
Sbjct: 18 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWN 54
>ref|NP_001035930.1| proactivator polypeptide isoform b preproprotein [Homo sapiens].
Length = 527
Score = 463 bits (1191), Expect(2) = 0.0
Identities = 217/265 (81%), Positives = 239/265 (90%)
Frame = +2
Query: 821 QPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVCE 1000
QPK+IC LVGFC+EVKE+PMQTLVPAKV S+ VI ALELVEPIKK VP K+ +YCEVCE
Sbjct: 263 QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVYCEVCE 322
Query: 1001 FVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPE 1180
F+VKEV KLIDNN+TE+EI+ A DK+CSKLP S+SEECQE+VDTYGSSILS+LL+E SPE
Sbjct: 323 FLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPE 382
Query: 1181 LVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG 1360
LVCSMLHLCS LP LT VT KDGGFCEVCK+LV YLDRNLEKNSTKQEILAALEKG
Sbjct: 383 LVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKG 442
Query: 1361 CSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWGP 1540
CSFLPDPYQKQCDQFV EYEPVL+EILVEVM+PSFVC KIGACPSAHKPLLGTEKC+WGP
Sbjct: 443 CSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGP 502
Query: 1541 SFWCQNMESAALCNAVEHCRRHVWN 1615
S+WCQN E+AA CNAVEHC+RHVWN
Sbjct: 503 SYWCQNTETAAQCNAVEHCKRHVWN 527
Score = 449 bits (1155), Expect(2) = 0.0
Identities = 210/241 (87%), Positives = 227/241 (94%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTASDCGA++HCLQTVWNKPTVKSLPCDICKDV+TAAGDMLKDNAT
Sbjct: 23 KECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDMLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
E+EILVYLE+TCDWLPKPNMSA+CKEIVDSY PVILD+IKG+MS+PGEVCSALNLCESLQ
Sbjct: 83 EEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCESLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAEL QKQLESN+IPELD+ E VAPFMANIPLLLYPQDG SKP+PK +GDVCQDCI
Sbjct: 143 KHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDVCQDCI 202
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHPT 825
QMVTD+Q AVRTNSTFV+ALV H KEECDRLGPGMAD+CKNYISQYSEIAIQMMMHM
Sbjct: 203 QMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMMHMQDQ 262
Query: 826 Q 828
Q
Sbjct: 263 Q 263
Score = 77.8 bits (190), Expect = 3e-14
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 44/219 (20%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLP-TSMSEECQELVDTYGS 1141
P ++ C++C+ VV ++ +N TEEEI+ L+K C LP +MS C+E+VD+Y
Sbjct: 56 PTVKSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLP 115
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST--------------------------------QGL 1222
IL ++ E S P VCS L+LC + +
Sbjct: 116 VILDIIKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANI 175
Query: 1223 PVL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPD 1378
P+L ++ P +G C+ C ++V+ + + NST Q ++ +++ C L
Sbjct: 176 PLLLYPQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 235
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEV--MEPSFVCSKIGAC 1489
C ++++Y + +++++ + +P +C+ +G C
Sbjct: 236 GMADICKNYISQYSEIAIQMMMHMQDQQPKEICALVGFC 274
Score = 64.7 bits (156), Expect = 3e-10
Identities = 49/204 (24%), Positives = 91/204 (44%)
Frame = +1
Query: 205 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFP 384
P + C++C+ ++ ++ +N TE+EIL ++ C LPK ++S C+E+VD+Y
Sbjct: 311 PAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK-SLSEECQEVVDTYGS 369
Query: 385 VILDMIKGQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANI 564
IL ++ ++S P VCS L+LC ++P L +
Sbjct: 370 SILSILLEEVS-PELVCSMLHLC----------------SGTRLPALTV----------- 401
Query: 565 PLLLYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGP 744
+PK DG C+ C ++V L + NST E L ++ C L
Sbjct: 402 -----------HVTQPK-DGGFCEVCKKLVGYLDRNLEKNSTKQEILA-ALEKGCSFLPD 448
Query: 745 GMADMCKNYISQYSEIAIQMMMHM 816
C ++++Y + I++++ +
Sbjct: 449 PYQKQCDQFVAEYEPVLIEILVEV 472
Score = 61.6 bits (148), Expect = 2e-09
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +V+ L+ N+T++EIL LEK C +LP P C + V Y PV+++I+
Sbjct: 63 CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 122
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
E+ P VCS + C S K L
Sbjct: 123 GEMSRPGEVCSALNLCESLQKHL 145
Score = 55.1 bits (131), Expect = 2e-07
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 412 CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVAEYEPVLIEILV 470
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C S K L
Sbjct: 471 -EVMDPSFVCLKIGACPSAHKPL 492
Score = 50.1 bits (118), Expect = 7e-06
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 1505 PLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
P+LG ++C G + WCQN+++A+ C AV+HC + VWN
Sbjct: 18 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWN 54
>ref|NP_001035931.1| proactivator polypeptide isoform c preproprotein [Homo sapiens].
Length = 526
Score = 463 bits (1191), Expect(2) = 0.0
Identities = 217/265 (81%), Positives = 239/265 (90%)
Frame = +2
Query: 821 QPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVCE 1000
QPK+IC LVGFC+EVKE+PMQTLVPAKV S+ VI ALELVEPIKK VP K+ +YCEVCE
Sbjct: 262 QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVYCEVCE 321
Query: 1001 FVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPE 1180
F+VKEV KLIDNN+TE+EI+ A DK+CSKLP S+SEECQE+VDTYGSSILS+LL+E SPE
Sbjct: 322 FLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPE 381
Query: 1181 LVCSMLHLCSTQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKG 1360
LVCSMLHLCS LP LT VT KDGGFCEVCK+LV YLDRNLEKNSTKQEILAALEKG
Sbjct: 382 LVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKG 441
Query: 1361 CSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWGP 1540
CSFLPDPYQKQCDQFV EYEPVL+EILVEVM+PSFVC KIGACPSAHKPLLGTEKC+WGP
Sbjct: 442 CSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGP 501
Query: 1541 SFWCQNMESAALCNAVEHCRRHVWN 1615
S+WCQN E+AA CNAVEHC+RHVWN
Sbjct: 502 SYWCQNTETAAQCNAVEHCKRHVWN 526
Score = 448 bits (1152), Expect(2) = 0.0
Identities = 209/237 (88%), Positives = 226/237 (95%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+ECTRGSAVWCQNVKTASDCGA++HCLQTVWNKPTVKSLPCDICKDV+TAAGDMLKDNAT
Sbjct: 23 KECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDMLKDNAT 82
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
E+EILVYLE+TCDWLPKPNMSA+CKEIVDSY PVILD+IKG+MS+PGEVCSALNLCESLQ
Sbjct: 83 EEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCESLQ 142
Query: 466 KHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDCI 645
KHLAEL QKQLESN+IPELD+ E VAPFMANIPLLLYPQDG SKP+PK +GDVCQDCI
Sbjct: 143 KHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDVCQDCI 202
Query: 646 QMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHM 816
QMVTD+Q AVRTNSTFV+ALV H KEECDRLGPGMAD+CKNYISQYSEIAIQMMMHM
Sbjct: 203 QMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMMHM 259
Score = 78.2 bits (191), Expect = 2e-14
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 43/218 (19%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLP-TSMSEECQELVDTYGS 1141
P ++ C++C+ VV ++ +N TEEEI+ L+K C LP +MS C+E+VD+Y
Sbjct: 56 PTVKSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLP 115
Query: 1142 SILSLLLQEAS-PELVCSMLHLCST--------------------------------QGL 1222
IL ++ E S P VCS L+LC + +
Sbjct: 116 VILDIIKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANI 175
Query: 1223 PVL-------TARVTPLKDGGFCEVCKRLVSYLDRNLEKNST-KQEILAALEKGCSFLPD 1378
P+L ++ P +G C+ C ++V+ + + NST Q ++ +++ C L
Sbjct: 176 PLLLYPQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 235
Query: 1379 PYQKQCDQFVTEYEPVLVEILVEV-MEPSFVCSKIGAC 1489
C ++++Y + +++++ + +P +C+ +G C
Sbjct: 236 GMADICKNYISQYSEIAIQMMMHMDQQPKEICALVGFC 273
Score = 64.7 bits (156), Expect = 3e-10
Identities = 49/204 (24%), Positives = 91/204 (44%)
Frame = +1
Query: 205 PTVKSLPCDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFP 384
P + C++C+ ++ ++ +N TE+EIL ++ C LPK ++S C+E+VD+Y
Sbjct: 310 PAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK-SLSEECQEVVDTYGS 368
Query: 385 VILDMIKGQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANI 564
IL ++ ++S P VCS L+LC ++P L +
Sbjct: 369 SILSILLEEVS-PELVCSMLHLC----------------SGTRLPALTV----------- 400
Query: 565 PLLLYPQDGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGP 744
+PK DG C+ C ++V L + NST E L ++ C L
Sbjct: 401 -----------HVTQPK-DGGFCEVCKKLVGYLDRNLEKNSTKQEILA-ALEKGCSFLPD 447
Query: 745 GMADMCKNYISQYSEIAIQMMMHM 816
C ++++Y + I++++ +
Sbjct: 448 PYQKQCDQFVAEYEPVLIEILVEV 471
Score = 61.6 bits (148), Expect = 2e-09
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 1268 CEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVTEYEPVLVEILV 1444
C++CK +V+ L+ N+T++EIL LEK C +LP P C + V Y PV+++I+
Sbjct: 63 CDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIK 122
Query: 1445 -EVMEPSFVCSKIGACPSAHKPL 1510
E+ P VCS + C S K L
Sbjct: 123 GEMSRPGEVCSALNLCESLQKHL 145
Score = 60.5 bits (145), Expect = 5e-09
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Frame = +1
Query: 229 DICKDVITAAGDM---LKDNATEQEILV-YLERTCDWLPKPNMSATCKEIVDSYFPVILD 396
D+C+D I D+ ++ N+T + LV +++ CD L P M+ CK + Y + +
Sbjct: 196 DVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLG-PGMADICKNYISQYSEIAIQ 254
Query: 397 MIKGQMSKPGEVCSALNLCESLQK-HLAELTQQKQLESNQIPELDLAEAVAPFMANIPLL 573
M+ +P E+C+ + C+ +++ + L K N IP L+L E +
Sbjct: 255 MMMHMDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPI---------- 304
Query: 574 LYPQDGSSSKPRPKADGDV-CQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGM 750
K A DV C+ C +V ++ + N T E +++ + C +L +
Sbjct: 305 --------KKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKE-ILDAFDKMCSKLPKSL 355
Query: 751 ADMCKNYISQYSEIAIQMMM 810
++ C+ + Y + +++
Sbjct: 356 SEECQEVVDTYGSSILSILL 375
Score = 55.1 bits (131), Expect = 2e-07
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++CK ++ L+ N+T+QEIL LE+ C +LP P C + V Y PV+++++
Sbjct: 411 CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVAEYEPVLIEILV 469
Query: 406 GQMSKPGEVCSALNLCESLQKHL 474
++ P VC + C S K L
Sbjct: 470 -EVMDPSFVCLKIGACPSAHKPL 491
Score = 50.1 bits (118), Expect = 7e-06
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 1505 PLLGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVWN 1615
P+LG ++C G + WCQN+++A+ C AV+HC + VWN
Sbjct: 18 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWN 54
>ref|NP_001078851.1| proactivator polypeptide-like 1 [Homo sapiens].
Length = 521
Score = 226 bits (576), Expect(2) = e-117
Identities = 116/274 (42%), Positives = 168/274 (61%), Gaps = 9/274 (3%)
Frame = +2
Query: 818 IQPKDICGLVGFCEEVKEVPMQTLVPAKVLSEKVISALELVEPIKKDLVPEKATIYCEVC 997
+ P+++C GFCEE+ T +V++ + +LEL P K+ + KA + CEVC
Sbjct: 242 LPPQELCRKGGFCEELGAPARLT----QVVAMDGVPSLELGLPRKQSEMQMKAGVTCEVC 297
Query: 998 EFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASP 1177
VV+++ + +N +E I HAL++VCS +P S+++EC LVDTY S++ L+ + +P
Sbjct: 298 MNVVQKLDHWLMSNSSELMITHALERVCSVMPASITKECIILVDTYSPSLVQLVAK-ITP 356
Query: 1178 ELVCSMLHLCSTQGLP---------VLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTK 1330
E VC + LC + V + G FC CKRL++ NLE STK
Sbjct: 357 EKVCKFIRLCGNRRRARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLTVSSHNLESKSTK 416
Query: 1331 QEILAALEKGCSFLPDPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPL 1510
++IL A + GCS LP PY QC FVT+YEPVL+E L ++M+P VC K+GAC PL
Sbjct: 417 RDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMDPVAVCKKVGACHGPRTPL 476
Query: 1511 LGTEKCVWGPSFWCQNMESAALCNAVEHCRRHVW 1612
LGT++C GPSFWC++ E+A LCNAV+HC++HVW
Sbjct: 477 LGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVW 510
Score = 217 bits (552), Expect(2) = e-117
Identities = 109/242 (45%), Positives = 156/242 (64%), Gaps = 1/242 (0%)
Frame = +1
Query: 106 RECTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNAT 285
+EC +GS VWCQ+++TA+ CGA+ +C VWNKPT KSLPCD+C+D+ AAG+ L +AT
Sbjct: 24 QECAKGSTVWCQDLQTAARCGAVGYCQGAVWNKPTAKSLPCDVCQDIAAAAGNGLNPDAT 83
Query: 286 EQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQM-SKPGEVCSALNLCESL 462
E +IL + +TC+WLP SA CK +VD++ IL M++G S P +VC+AL+LCE L
Sbjct: 84 ESDILALVMKTCEWLPSQESSAGCKWMVDAHSSAILSMLRGAPDSAPAQVCTALSLCEPL 143
Query: 463 QKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQDGSSSKPRPKADGDVCQDC 642
Q+HLA L + + D EAVAPFMAN PL + PR +G +CQDC
Sbjct: 144 QRHLATL--------RPLSKEDTFEAVAPFMANGPLTFH--------PRQAPEGALCQDC 187
Query: 643 IQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCKNYISQYSEIAIQMMMHMHP 822
++ V+ LQ AVR+N T + + +E+C+ LGPG+A +CKNY+ Q+ A Q + + P
Sbjct: 188 VRQVSRLQEAVRSNLTLADL---NIQEQCESLGPGLAVLCKNYLFQFFVPADQALRLLPP 244
Query: 823 TQ 828
+
Sbjct: 245 QE 246
Score = 60.5 bits (145), Expect = 5e-09
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
Frame = +2
Query: 965 PEKATIYCEVCEFVVKEVAKLIDNNRTEEEIIHALDKVCSKLPTSMSEE-CQELVDTYGS 1141
P ++ C+VC+ + ++ + TE +I+ + K C LP+ S C+ +VD + S
Sbjct: 57 PTAKSLPCDVCQDIAAAAGNGLNPDATESDILALVMKTCEWLPSQESSAGCKWMVDAHSS 116
Query: 1142 SILSLL--LQEASPELVCSMLHLCSTQGLPVLTAR----------VTPL----------- 1252
+ILS+L +++P VC+ L LC + T R V P
Sbjct: 117 AILSMLRGAPDSAPAQVCTALSLCEPLQRHLATLRPLSKEDTFEAVAPFMANGPLTFHPR 176
Query: 1253 --KDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVTEYEPV 1426
+G C+ C R VS L + N T ++ +++ C L C ++ ++ V
Sbjct: 177 QAPEGALCQDCVRQVSRLQEAVRSNLTLADL--NIQEQCESLGPGLAVLCKNYLFQFF-V 233
Query: 1427 LVEILVEVMEPSFVCSKIGACPSAHKP 1507
+ + ++ P +C K G C P
Sbjct: 234 PADQALRLLPPQELCRKGGFCEELGAP 260
Score = 52.8 bits (125), Expect = 1e-06
Identities = 45/197 (22%), Positives = 83/197 (42%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C++C +V+ L N++E I LER C +P +++ C +VD+Y P ++ ++
Sbjct: 294 CEVCMNVVQKLDHWLMSNSSELMITHALERVCSVMP-ASITKECIILVDTYSPSLVQLV- 351
Query: 406 GQMSKPGEVCSALNLCESLQKHLAELTQQKQLESNQIPELDLAEAVAPFMANIPLLLYPQ 585
P +VC + LC + ++ A AV A +P
Sbjct: 352 -AKITPEKVCKFIRLCGNRRR---------------------ARAVHDAYAIVP------ 383
Query: 586 DGSSSKPRPKADGDVCQDCIQMVTDLQNAVRTNSTFVEALVNHAKEECDRLGPGMADMCK 765
S + + G C C +++T + + + ST + LV K C L CK
Sbjct: 384 ---SPEWDAENQGSFCNGCKRLLTVSSHNLESKSTKRDILVAF-KGGCSILPLPYMIQCK 439
Query: 766 NYISQYSEIAIQMMMHM 816
++++QY + I+ + M
Sbjct: 440 HFVTQYEPVLIESLKDM 456
Score = 49.7 bits (117), Expect = 9e-06
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +1
Query: 226 CDICKDVITAAGDMLKDNATEQEILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIK 405
C+ CK ++T + L+ +T+++ILV + C LP P M CK V Y PV+++ +K
Sbjct: 396 CNGCKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYM-IQCKHFVTQYEPVLIESLK 454
Query: 406 GQMSKPGEVCSALNLC 453
M P VC + C
Sbjct: 455 DMMD-PVAVCKKVGAC 469
>ref|NP_000533.3| pulmonary surfactant-associated protein B precursor [Homo sapiens].
Length = 393
Score = 87.0 bits (214), Expect = 5e-17
Identities = 40/118 (33%), Positives = 63/118 (53%)
Frame = +1
Query: 112 CTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATEQ 291
C +G WCQ+++ A C AL HCLQ VW L C C+D++ M K+ +
Sbjct: 44 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVHILNKMAKEAIFQD 102
Query: 292 EILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
+ +LE+ C+ LP + C +++D YFP+++D + Q G +C L LC+S Q
Sbjct: 103 TMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQTDSNG-ICMHLGLCKSRQ 159
Score = 60.5 bits (145), Expect = 5e-09
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 13/235 (5%)
Frame = +2
Query: 875 PMQTLVPAKVLSEKVISALELV-----EPIKKDLVPEKATI---YCEVCEFVVKEVAKLI 1030
P++ +P +L + V+ L P +DL ++ I YC +C ++K + +I
Sbjct: 175 PLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRIQAMI 234
Query: 1031 DNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPELVCSMLHLCS 1210
+ A+ +VC +P CQ L + Y +L LL P+LVC ++ CS
Sbjct: 235 PKGA----LAVAVAQVCRVVPLVAGGICQCLAERYSVILLDTLLGRMLPQLVCRLVLRCS 290
Query: 1211 ---TQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGC--SFLP 1375
+ G T P C +C + + NS++Q I A+ + C S+L
Sbjct: 291 MDDSAGPRSPTGEWLPRDSE--CHLCMSVTTQAG-----NSSEQAIPQAMLQACVGSWLD 343
Query: 1376 DPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWGP 1540
+++C QFV ++ P L+ ++ + C +G C + PL +C+ P
Sbjct: 344 ---REKCKQFVEQHTPQLLTLVPRGWDAHTTCQALGVCGTMSSPL----QCIHSP 391
>ref|NP_942140.2| pulmonary surfactant-associated protein B precursor [Homo sapiens].
Length = 393
Score = 87.0 bits (214), Expect = 5e-17
Identities = 40/118 (33%), Positives = 63/118 (53%)
Frame = +1
Query: 112 CTRGSAVWCQNVKTASDCGALQHCLQTVWNKPTVKSLPCDICKDVITAAGDMLKDNATEQ 291
C +G WCQ+++ A C AL HCLQ VW L C C+D++ M K+ +
Sbjct: 44 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVHILNKMAKEAIFQD 102
Query: 292 EILVYLERTCDWLPKPNMSATCKEIVDSYFPVILDMIKGQMSKPGEVCSALNLCESLQ 465
+ +LE+ C+ LP + C +++D YFP+++D + Q G +C L LC+S Q
Sbjct: 103 TMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQTDSNG-ICMHLGLCKSRQ 159
Score = 60.5 bits (145), Expect = 5e-09
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 13/235 (5%)
Frame = +2
Query: 875 PMQTLVPAKVLSEKVISALELV-----EPIKKDLVPEKATI---YCEVCEFVVKEVAKLI 1030
P++ +P +L + V+ L P +DL ++ I YC +C ++K + +I
Sbjct: 175 PLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRIQAMI 234
Query: 1031 DNNRTEEEIIHALDKVCSKLPTSMSEECQELVDTYGSSILSLLLQEASPELVCSMLHLCS 1210
+ A+ +VC +P CQ L + Y +L LL P+LVC ++ CS
Sbjct: 235 PKGA----LAVAVAQVCRVVPLVAGGICQCLAERYSVILLDTLLGRMLPQLVCRLVLRCS 290
Query: 1211 ---TQGLPVLTARVTPLKDGGFCEVCKRLVSYLDRNLEKNSTKQEILAALEKGC--SFLP 1375
+ G T P C +C + + NS++Q I A+ + C S+L
Sbjct: 291 MDDSAGPRSPTGEWLPRDSE--CHLCMSVTTQAG-----NSSEQAIPQAMLQACVGSWLD 343
Query: 1376 DPYQKQCDQFVTEYEPVLVEILVEVMEPSFVCSKIGACPSAHKPLLGTEKCVWGP 1540
+++C QFV ++ P L+ ++ + C +G C + PL +C+ P
Sbjct: 344 ---REKCKQFVEQHTPQLLTLVPRGWDAHTTCQALGVCGTMSSPL----QCIHSP 391
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 70,799,727
Number of extensions: 2015167
Number of successful extensions: 9745
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 9633
Number of HSP's successfully gapped: 31
Length of query: 592
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 484
Effective length of database: 14,737,052
Effective search space: 7132733168
Effective search space used: 7132733168
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007726
(1777 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 402 e-109
>Sscrofa_Chr14
|| Length = 153851969
Score = 402 bits (203), Expect = e-109
Identities = 203/203 (100%)
Strand = Plus / Minus
Query: 414 gagcaagcccggggaggtgtgctccgctctgaacctctgcgagtctcttcagaagcacct 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80637197 gagcaagcccggggaggtgtgctccgctctgaacctctgcgagtctcttcagaagcacct 80637138
Query: 474 ggcggagctgacccagcagaagcagctcgagtccaatcagataccagaactggatctggc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80637137 ggcggagctgacccagcagaagcagctcgagtccaatcagataccagaactggatctggc 80637078
Query: 534 cgaggcggtggctcccttcatggccaacatccccctcctcctctaccctcaggacggctc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80637077 cgaggcggtggctcccttcatggccaacatccccctcctcctctaccctcaggacggctc 80637018
Query: 594 cagcagcaagccccggccgaagg 616
|||||||||||||||||||||||
Sbjct: 80637017 cagcagcaagccccggccgaagg 80636995
Score = 375 bits (189), Expect = e-101
Identities = 189/189 (100%)
Strand = Plus / Minus
Query: 1047 aggaggaaatcattcacgctctggacaaagtgtgctccaagttgcccacgtccatgtccg 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80628988 aggaggaaatcattcacgctctggacaaagtgtgctccaagttgcccacgtccatgtccg 80628929
Query: 1107 aggagtgccaggagttggtcgacacgtacggcagctccatcctgtcgctcctcctgcagg 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80628928 aggagtgccaggagttggtcgacacgtacggcagctccatcctgtcgctcctcctgcagg 80628869
Query: 1167 aggcgagccctgagttggtgtgcagcatgctccatctctgctccacccaggggctgcccg 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80628868 aggcgagccctgagttggtgtgcagcatgctccatctctgctccacccaggggctgcccg 80628809
Query: 1227 tgttgactg 1235
|||||||||
Sbjct: 80628808 tgttgactg 80628800
Score = 315 bits (159), Expect = 5e-83
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 1235 gcgcgtgtgacaccgctgaaggacggtggcttctgtgaggtgtgcaagaggctggtgagc 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80628699 gcgcgtgtgacaccgctgaaggacggtggcttctgtgaggtgtgcaagaggctggtgagc 80628640
Query: 1295 tatttggaccgcaacctggagaaaaacagcacaaagcaggagatcctggctgccctggag 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80628639 tatttggaccgcaacctggagaaaaacagcacaaagcaggagatcctggctgccctggag 80628580
Query: 1355 aaaggctgcagcttcctgcctgacccgtaccagaagcag 1393
|||||||||||||||||||||||||||||||||||||||
Sbjct: 80628579 aaaggctgcagcttcctgcctgacccgtaccagaagcag 80628541
Score = 289 bits (146), Expect = 3e-75
Identities = 146/146 (100%)
Strand = Plus / Minus
Query: 614 aggctgatggggacgtttgccaggactgcattcagatggtgactgacctccagaacgctg 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80636690 aggctgatggggacgtttgccaggactgcattcagatggtgactgacctccagaacgctg 80636631
Query: 674 tgaggaccaactccacctttgtcgaggccttggtgaaccacgccaaggaggagtgtgacc 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80636630 tgaggaccaactccacctttgtcgaggccttggtgaaccacgccaaggaggagtgtgacc 80636571
Query: 734 gcctggggcccggcatggccgacatg 759
||||||||||||||||||||||||||
Sbjct: 80636570 gcctggggcccggcatggccgacatg 80636545
Score = 268 bits (135), Expect = 1e-68
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 79 gctctcgccagccccgtcctgggcctgagagagtgcaccaggggctcggccgtgtggtgc 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80641229 gctctcgccagccccgtcctgggcctgagagagtgcaccaggggctcggccgtgtggtgc 80641170
Query: 139 cagaacgtgaagacagcatccgactgcggggccctgcagcactgcctgcagaccgtctgg 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80641169 cagaacgtgaagacagcatccgactgcggggccctgcagcactgcctgcagaccgtctgg 80641110
Query: 199 aacaagccaaccgtg 213
|||||||||||||||
Sbjct: 80641109 aacaagccaaccgtg 80641095
Score = 266 bits (134), Expect = 4e-68
Identities = 181/200 (90%), Gaps = 5/200 (2%)
Strand = Plus / Minus
Query: 1583 gctgtcgagcactgcaggcgtcacgtgtggaactagaaggcacgttccatcctggagaaa 1642
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80626323 gctgtcgagcactgcaagcgtcacgtgtggaactagaaggcacgttccatcctggagaaa 80626264
Query: 1643 ctgcagcatttttccctgcttgtgtgtctgggggaatgaacacacagatctgtcgacttt 1702
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 80626263 ctgcagcattttttcctgcttgtgtgtctgggggaacgaacacacagatctgtcgacttt 80626204
Query: 1703 gtccaaaaatag-----nnnnnnnnnnagtccctttcttctctccctcatcgtagccctg 1757
|||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 80626203 gtccaaaaatagcccccccctccccccagtccctttcttctctccctcatcgtagcgctg 80626144
Query: 1758 ctgtgggtgggctgctgaag 1777
||||||||||||||||||||
Sbjct: 80626143 ctgtgggtgggctgctgaag 80626124
Score = 262 bits (132), Expect = 6e-67
Identities = 132/132 (100%)
Strand = Plus / Minus
Query: 821 caacccaaggacatctgtgggctggttggattctgtgaggaggtgaaggaggtgcccatg 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80631002 caacccaaggacatctgtgggctggttggattctgtgaggaggtgaaggaggtgcccatg 80630943
Query: 881 cagactctggtgcctgccaaggtgctctcggagaaagtcatctctgccctggagctggtg 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80630942 cagactctggtgcctgccaaggtgctctcggagaaagtcatctctgccctggagctggtg 80630883
Query: 941 gagcccataaag 952
||||||||||||
Sbjct: 80630882 gagcccataaag 80630871
Score = 254 bits (128), Expect = 1e-64
Identities = 128/128 (100%)
Strand = Plus / Minus
Query: 287 agcaggagatcctcgtgtacttggagaggacgtgtgactggcttcccaagccgaacatgt 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80638285 agcaggagatcctcgtgtacttggagaggacgtgtgactggcttcccaagccgaacatgt 80638226
Query: 347 ctgccacgtgcaaggagatcgttgactcctacttccctgtcatcctggacatgattaaag 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80638225 ctgccacgtgcaaggagatcgttgactcctacttccctgtcatcctggacatgattaaag 80638166
Query: 407 gacagatg 414
||||||||
Sbjct: 80638165 gacagatg 80638158
Score = 218 bits (110), Expect = 8e-54
Identities = 110/110 (100%)
Strand = Plus / Minus
Query: 1474 gaaaattggagcctgcccttcagcccataagcctcttttgggaactgagaagtgcgtctg 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80627430 gaaaattggagcctgcccttcagcccataagcctcttttgggaactgagaagtgcgtctg 80627371
Query: 1534 gggcccgagcttctggtgccagaacatggagtcggcagccctgtgcaacg 1583
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80627370 gggcccgagcttctggtgccagaacatggagtcggcagccctgtgcaacg 80627321
Score = 196 bits (99), Expect = 3e-47
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 951 agaaggacctggtcccggagaaggccactatttactgtgaggtgtgcgagttcgtggtga 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80629387 agaaggacctggtcccggagaaggccactatttactgtgaggtgtgcgagttcgtggtga 80629328
Query: 1011 aggaggtggccaagctgatcgacaacaacaggaccgagg 1049
|||||||||||||||||||||||||||||||||||||||
Sbjct: 80629327 aggaggtggccaagctgatcgacaacaacaggaccgagg 80629289
Score = 167 bits (84), Expect = 3e-38
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 1391 cagtgcgatcagttcgtgacggagtacgagcctgtgctggttgagatcctggtggaggtg 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80628195 cagtgcgatcagttcgtgacggagtacgagcctgtgctggttgagatcctggtggaggtg 80628136
Query: 1451 atggagccgtcgttcgtgtgctcg 1474
||||||||||||||||||||||||
Sbjct: 80628135 atggagccgtcgttcgtgtgctcg 80628112
Score = 151 bits (76), Expect = 2e-33
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 213 gaaatcccttccctgtgacatatgcaaagatgtcatcactgcagctggcgacatgttgaa 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80638921 gaaatcccttccctgtgacatatgcaaagatgtcatcactgcagctggcgacatgttgaa 80638862
Query: 273 agacaatgccactgag 288
||||||||||||||||
Sbjct: 80638861 agacaatgccactgag 80638846
Score = 147 bits (74), Expect = 2e-32
Identities = 77/78 (98%)
Strand = Plus / Minus
Query: 2 gacacccggcattgcagtgtgcggagtcaggcggcgtcatgtacaccttgttcctcttgg 61
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80660674 gacaccctgcattgcagtgtgcggagtcaggcggcgtcatgtacaccttgttcctcttgg 80660615
Query: 62 ctggccttctgggcgcgg 79
||||||||||||||||||
Sbjct: 80660614 ctggccttctgggcgcgg 80660597
Score = 147 bits (74), Expect = 2e-32
Identities = 77/78 (98%)
Strand = Plus / Minus
Query: 2 gacacccggcattgcagtgtgcggagtcaggcggcgtcatgtacaccttgttcctcttgg 61
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80826348 gacaccctgcattgcagtgtgcggagtcaggcggcgtcatgtacaccttgttcctcttgg 80826289
Query: 62 ctggccttctgggcgcgg 79
||||||||||||||||||
Sbjct: 80826288 ctggccttctgggcgcgg 80826271
Score = 115 bits (58), Expect = 9e-23
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 759 gtgcaagaactatatcagccagtactcggaaatcgctatccagatgatgatgcacatg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80635727 gtgcaagaactatatcagccagtactcggaaatcgctatccagatgatgatgcacatg 80635670
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 46,145,500
Number of extensions: 243
Number of successful extensions: 243
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 243
Number of HSP's successfully gapped: 16
Length of query: 1777
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1755
Effective length of database: 2,808,408,574
Effective search space: 4928757047370
Effective search space used: 4928757047370
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)