Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007767
(2392 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001015590.2| inter-alpha-trypsin inhibitor heavy chain H4... 1081 0.0
Alignment gi|NP_001095368.1| inter-alpha-trypsin inhibitor heavy chain H3... 600 e-171
Alignment gi|NP_001091485.1| inter-alpha-trypsin inhibitor heavy chain H2... 467 e-131
Alignment gi|NP_001068821.1| inter-alpha-trypsin inhibitor heavy chain H1... 463 e-130
Alignment gi|NP_001095986.1| inter-alpha-trypsin inhibitor heavy chain H5... 372 e-103
Alignment gi|XP_002707867.1| PREDICTED: calcium channel, voltage-dependen... 52 2e-06
Alignment gi|XP_001787557.1| PREDICTED: voltage-gated calcium channel alp... 52 2e-06
Alignment gi|XP_002691213.1| PREDICTED: von Willebrand factor A domain co... 52 2e-06
>ref|NP_001015590.2| inter-alpha-trypsin inhibitor heavy chain H4 precursor [Bos taurus].
Length = 916
Score = 1081 bits (2796), Expect = 0.0
Identities = 580/774 (74%), Positives = 638/774 (82%), Gaps = 19/774 (2%)
Frame = +1
Query: 127 QSTTAHK--NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITN 300
Q++ A K NDI+IYSLTVDSKVSSRFAHTV+TSRVVNK AV+EATFQMELPKKAFITN
Sbjct: 23 QTSKAQKVQNDIDIYSLTVDSKVSSRFAHTVITSRVVNKADAVREATFQMELPKKAFITN 82
Query: 301 FSMIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVT 480
FSM+IDGVTYPGNI RGESAGLVRATGRKTEQFQV+VSVAPAAKVT
Sbjct: 83 FSMVIDGVTYPGNIKEKAAAQEQYSAAVARGESAGLVRATGRKTEQFQVSVSVAPAAKVT 142
Query: 481 FELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEA 660
FELVYEELLARHLG YELLLK++PQQLVKHLQMDIHIFEPQGISFLETESTFMTN+LAEA
Sbjct: 143 FELVYEELLARHLGAYELLLKVRPQQLVKHLQMDIHIFEPQGISFLETESTFMTNKLAEA 202
Query: 661 LTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVH 840
LT SQNKTKAH+RFKPTLSQQQK PE+Q+TV+DG+FIVRYDV+R ++GGSIQIENGYFVH
Sbjct: 203 LTTSQNKTKAHVRFKPTLSQQQKYPEKQDTVIDGSFIVRYDVDRPLSGGSIQIENGYFVH 262
Query: 841 YFAPEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQ 1020
YFAP+ LS IPKNVIFVID SGSM GRKI+QTREALIKIL DL DQF+L+SFS EAT
Sbjct: 263 YFAPDSLSTIPKNVIFVIDKSGSMMGRKIKQTREALIKILDDLSPHDQFDLISFSSEATT 322
Query: 1021 WKKGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLII 1200
WK L+PAS ENV EAKSYA I AQGGTNINDAMLMAVQLLE+AN+EELLP S+TLII
Sbjct: 323 WKPLLVPASTENVNEAKSYATGIQAQGGTNINDAMLMAVQLLEKANQEELLPEGSITLII 382
Query: 1201 LLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIY 1380
LLTDGDPTVGETNP IQKNVR+AI+GQHSLFCLGFGFDVSYAFLEKMALENGGLARRIY
Sbjct: 383 LLTDGDPTVGETNPLNIQKNVRKAINGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIY 442
Query: 1381 EDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQS 1560
EDSDSALQL+DFYQEVANPL+ VAFEYPSNAVE+VTQD FR+FFKGSELVVAGKLR+QS
Sbjct: 443 EDSDSALQLQDFYQEVANPLMTSVAFEYPSNAVESVTQDTFRVFFKGSELVVAGKLREQS 502
Query: 1561 PDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTV 1740
PDVL A++RGQLH EN+T++M S VAEQE F SPKYIFHSF+ERLWAYLTIQQLL Q V
Sbjct: 503 PDVLLAQIRGQLHRENITYMMMSHVAEQEEMFRSPKYIFHSFIERLWAYLTIQQLLEQMV 562
Query: 1741 SASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNRQGNTHSG 1920
SA DAEK+ALEARALSLSL+YSFVTPLTSMVITKPEGQEQSQVAEKPVE+ +R + G
Sbjct: 563 SALDAEKQALEARALSLSLSYSFVTPLTSMVITKPEGQEQSQVAEKPVEDESRGSRVYLG 622
Query: 1921 HYSFQFHSVGDRTSRLTGGS----SVDPVFSHRRGWKGQGPPGPLQPTRFSHPFSRITLD 2088
F HSVGDRTSR GG + P+F GPPGP P S PF R+T
Sbjct: 623 PMRFG-HSVGDRTSRKPGGGLKLLNGTPLF---------GPPGP--PAAAS-PFHRMTSR 669
Query: 2089 RVLPEVLSV------------PDETSHDMDSRIIGATIPPPP-ARIQAPSVILPLPGQSV 2229
VLPE++S P SHD D RI G T P A +QAPSVILPLPGQSV
Sbjct: 670 LVLPELMSPLAPASAPSPTSGPGGASHDTDFRIKGTTPTALPFAPVQAPSVILPLPGQSV 729
Query: 2230 DQLCVDLKHSQGPMKLLSDPGQRVEVTGHYGKEKARFSWIEVTFKHPPLQVLAS 2391
D+LCVDL+ Q + LLSDP Q VEVTGH+ KARFSWIEVTF++P +Q+ AS
Sbjct: 730 DRLCVDLRRPQELVNLLSDPDQGVEVTGHFETAKARFSWIEVTFENPQVQIHAS 783
>ref|NP_001095368.1| inter-alpha-trypsin inhibitor heavy chain H3 precursor [Bos taurus].
Length = 891
Score = 600 bits (1548), Expect = e-171
Identities = 306/580 (52%), Positives = 412/580 (71%), Gaps = 2/580 (0%)
Frame = +1
Query: 154 INIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYP 333
I +YS V+ KV+SRFAH VVT+R VN + +E +F +ELPK AFITNF++ IDGVTYP
Sbjct: 43 IEVYSTKVNCKVTSRFAHNVVTTRAVNHANTAKEVSFDVELPKTAFITNFTLTIDGVTYP 102
Query: 334 GNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLAR 513
G + +G++AGLV+A+GRK E+F V+V+VA +KVTFEL YEELL R
Sbjct: 103 GKVKEKEVAKKQYEKAVSQGKTAGLVKASGRKLEKFTVSVNVAAGSKVTFELTYEELLKR 162
Query: 514 HLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNEL-AEALTISQNKTKA 690
H G YE+ LK+QP+QLVKH ++ + IFEPQGIS L+ E++F+TN+L ALT S + K
Sbjct: 163 HKGKYEMYLKVQPKQLVKHFEITVDIFEPQGISTLDAEASFITNDLLGSALTKSFSGKKG 222
Query: 691 HIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLSAI 870
H+ FKP+L QQ+ P +++L G+FI+ YDVNR + ++QI NGYFVH+FAP+GL +
Sbjct: 223 HVSFKPSLDQQRSCPTCTDSLLKGDFIITYDVNRE-SPANVQIVNGYFVHFFAPQGLPVV 281
Query: 871 PKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPASA 1050
PK+V+FVID SGSM GRK++QT++AL+KIL D+ D N + FSG+ T WK L+PA+
Sbjct: 282 PKSVVFVIDVSGSMHGRKMEQTKDALLKILEDVKQDDYLNFILFSGDVTTWKDSLVPATP 341
Query: 1051 ENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVG 1230
EN++EA + I +G TNINDA+L + +L +A E +P RS ++II+LTDGD VG
Sbjct: 342 ENIQEASKFVMDIQDRGMTNINDALLRGISMLNKAREEHTVPERSTSIIIMLTDGDANVG 401
Query: 1231 ETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQLE 1410
E+ P KIQ+NVR AI G+ L+ LGFG +++Y FLE MALEN GLARRIYEDSD+ LQL+
Sbjct: 402 ESRPEKIQENVRNAIGGKFPLYNLGFGNNLNYNFLENMALENHGLARRIYEDSDANLQLQ 461
Query: 1411 DFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKVRG 1590
FY+EVANPLL V EYP NA+ +TQ++++ F+ GSE+VVAG+L D+ + A V+G
Sbjct: 462 GFYEEVANPLLTGVEVEYPQNAILDLTQNSYQHFYDGSEIVVAGRLADEDMNSFKAAVKG 521
Query: 1591 QLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSASDAEKKAL 1770
+ ++TF E + E E YIF ++ERLWAYLTI+QLL + +A EK+ L
Sbjct: 522 HGAINDLTFTEEVDMKEMEKALQERDYIFGDYIERLWAYLTIEQLLDKRKNAQGEEKEIL 581
Query: 1771 EARALSLSLNYSFVTPLTSMVITKPEGQE-QSQVAEKPVE 1887
A+AL LSL Y FVTPLTSMV+TKPE E Q+ +A KP E
Sbjct: 582 TAQALELSLKYHFVTPLTSMVVTKPEDNENQTAIANKPGE 621
>ref|NP_001091485.1| inter-alpha-trypsin inhibitor heavy chain H2 [Bos taurus].
Length = 946
Score = 467 bits (1201), Expect = e-131
Identities = 286/732 (39%), Positives = 422/732 (57%), Gaps = 6/732 (0%)
Frame = +1
Query: 136 TAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMII 315
T + + +YS V S ++SR A+TV+ ++VVN Q F +++PK AFI+NFSM +
Sbjct: 64 TEDVDQVTVYSYKVQSTITSRVANTVIQTKVVNHSPQPQNVVFDVQIPKGAFISNFSMTV 123
Query: 316 DGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVY 495
DG T+ +I +G++AGLVR+ E F+ VS+AP AKV FEL Y
Sbjct: 124 DGTTFTSSIKEKTVGRALYAQARAKGKTAGLVRSRALDMEDFKTEVSIAPGAKVQFELHY 183
Query: 496 EELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALTISQ 675
+E+ R LG YE L ++P +L KHL++D+ I EPQG+ L TF +S+
Sbjct: 184 QEVKWRKLGSYEHRLHLKPGRLAKHLEVDVRIIEPQGLRSLHVLDTF-DGHFDGVPVVSK 242
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
KAHI FKPT++QQ+K ET++DG +V YDVNR G +++ NGYFVH+FAPE
Sbjct: 243 GPQKAHIAFKPTVAQQRKCLNCSETMVDGELVVMYDVNREEKVGELEVFNGYFVHFFAPE 302
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGL 1035
+ IPKN++FVID SGSM G K++QT EA+ IL DL + D F++V F+ W+ L
Sbjct: 303 NMDPIPKNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRTEDHFSVVDFNHNVRTWRNDL 362
Query: 1036 LPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDG 1215
+ A+ V +AK+Y KI GGTNIN+A+L A+ +L AN +L SV+LIIL++DG
Sbjct: 363 VSATKTQVADAKNYIEKIQPSGGTNINEALLRAIFILNEANNLGMLDPNSVSLIILVSDG 422
Query: 1216 DPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDS 1395
DPTVGE SKIQKNV++ I SLF LG GFDV Y FL++++ +N G+A+RIY + D+
Sbjct: 423 DPTVGELKLSKIQKNVKQNIRDNISLFSLGIGFDVDYDFLKRLSNDNRGIAQRIYGNQDT 482
Query: 1396 ALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLS 1575
++QL+ FY +V+ PLLR V F YP +V VTQ++F +F GSE+VVAGK+ + L
Sbjct: 483 SVQLKKFYNQVSTPLLRNVQFNYPQPSVTDVTQNSFHNYFGGSEIVVAGKVDPEKLGQLQ 542
Query: 1576 AKVRGQLHMENVTFVMESRVAEQEA--EFLS-PKYIFHSFMERLWAYLTIQQLLAQ-TVS 1743
+ + N V+E+ +AE + +FLS K+ F ++LWAYLTI QLLA+ +++
Sbjct: 543 SIITAT--SANAELVLET-LAEMDGLEDFLSKDKHADPDFTKKLWAYLTINQLLAERSLA 599
Query: 1744 ASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNRQGNTHSGH 1923
+ A K+ + L +SL++ VTPLT+MVI G E+ +A+ P ++ HS
Sbjct: 600 PTAAMKRKITKTILQMSLDHHIVTPLTAMVIENEAGDER-MLADSPPQD-------HSCC 651
Query: 1924 YSFQFHSVGDRTSRLTGGSSVDPVFSHRRGWKGQGPPGPLQPTRFSHPFSRITLDRVLPE 2103
+H G + S + S V+P P P+ P +P
Sbjct: 652 SGALYH--GSKVSPNSVPSWVNP------------SPAPVLP---------------MPA 682
Query: 2104 VLSVPDETSHDMDSRIIGATIPPPPARIQ-APSVILPLPGQSVDQLCVDLKHSQGP-MKL 2277
V ++++ +T PP R++ P I+ LP +S +C ++ G + L
Sbjct: 683 V-----------GAQVLESTPPPHVMRVENDPHFIIYLP-KSQKNICFNIDSEPGKILNL 730
Query: 2278 LSDPGQRVEVTG 2313
+SDP + V G
Sbjct: 731 VSDPELGILVNG 742
>ref|NP_001068821.1| inter-alpha-trypsin inhibitor heavy chain H1 precursor [Bos taurus].
Length = 906
Score = 463 bits (1192), Expect = e-130
Identities = 250/583 (42%), Positives = 368/583 (63%), Gaps = 6/583 (1%)
Frame = +1
Query: 160 IYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGN 339
I SL V+ KV+SRFAH ++TS+VVN +E +F +E+PK AFI++F++ D + G+
Sbjct: 48 IRSLKVNCKVTSRFAHYIITSQVVNSADTAKEVSFNVEIPKTAFISDFAITADENAFTGD 107
Query: 340 IXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLARHL 519
I GE+AGLVRA+GR EQF + + V P +K TF L YEE+L R L
Sbjct: 108 IKDKVTAWKQYRKAAISGENAGLVRASGRTMEQFSIHIIVGPRSKATFRLTYEEVLRRKL 167
Query: 520 GVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELA-EALTISQNKTKAHI 696
Y++++K++PQQLV+H ++D+ IFEPQGI L+ E++F+ ELA + + S + K H+
Sbjct: 168 MQYDIVIKVKPQQLVQHFEIDVDIFEPQGIRKLDVEASFLPKELAAQLIKKSFSGKKGHV 227
Query: 697 RFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLSAIPK 876
F+PT+SQQQ P T+L+G+F V YDVNR + + N YF H+FAP+ L + K
Sbjct: 228 LFRPTVSQQQTCPTCSTTLLNGDFKVTYDVNRD-DACDLLVANNYFAHFFAPQNLKKLNK 286
Query: 877 NVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPASAEN 1056
NV+FVID S SM G+K++QT+EAL KILGD+ D F+LV F WK L+ AS N
Sbjct: 287 NVVFVIDISSSMEGQKLKQTKEALHKILGDMRPGDYFDLVLFGSAVQSWKGSLVQASPAN 346
Query: 1057 VEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVGET 1236
+E A+++ + G TN+N +L +++L +A + + +++I+LTDG+PT G
Sbjct: 347 LEAARNFVQQFSLAGATNLNGGLLRGIEILNKAQQSLPELSNHASILIMLTDGEPTEGVM 406
Query: 1237 NPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQLEDF 1416
+ ++I KNVR+ I G+ L+ LGFG DV FLE M+LEN G +RIYED D+ QL+ F
Sbjct: 407 DRTQILKNVRDGIKGRFPLYNLGFGHDVDLNFLEVMSLENNGRVQRIYEDHDATQQLQGF 466
Query: 1417 YQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKVRGQL 1596
Y++VANPLLR V YP AV +TQ + +++GSE++VAG++ D A VR
Sbjct: 467 YEQVANPLLRDVELLYPREAVSDLTQHRHKQYYEGSEIMVAGRIADHKLSSFKADVRA-- 524
Query: 1597 HMENVTFVMESRVAEQEAEFLSPK--YIFHSFMERLWAYLTIQQLLAQTVSASDAEKKAL 1770
H E F+ V ++E + L + ++ + +ERLWAYLTIQ+LLA+ + EK +
Sbjct: 525 HGEGQEFMTTCLVDKEEMKKLLRERGHMLENHVERLWAYLTIQELLAKRMKLEGQEKANV 584
Query: 1771 EARALSLSLNYSFVTPLTSMVI---TKPEGQEQSQVAEKPVEN 1890
A+AL +SL Y FVTPLTSM + T +G E + +KP+++
Sbjct: 585 SAKALQMSLAYQFVTPLTSMTVRGMTDQDGLE--PIIDKPLDD 625
>ref|NP_001095986.1| inter-alpha-trypsin inhibitor heavy chain H5 precursor [Bos taurus].
Length = 940
Score = 372 bits (956), Expect = e-103
Identities = 226/588 (38%), Positives = 330/588 (56%), Gaps = 21/588 (3%)
Frame = +1
Query: 172 TVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXX 351
+V S + SR+A T V R++N+GS QE TFQM++P AFITNF+ +I Y G I
Sbjct: 55 SVKSTIISRYAFTTVACRMLNRGSEDQEVTFQMQIPAAAFITNFTALIGDKVYQGEITER 114
Query: 352 XXXXXXXXXXXXRGESAGLVRATGRK-TEQFQVAVSVAPAAKVTFELVYEELLARHLGVY 528
+ + + G K TE F+ + + K F L YEELL R LG Y
Sbjct: 115 EKRNGDKV----KEKRNKTIEDNGEKGTETFRASAVLPSKDKAAFLLSYEELLQRRLGKY 170
Query: 529 ELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAE-----------ALTISQ 675
E ++ ++PQQLV L +++ + E GI+ LE + + + I+Q
Sbjct: 171 EHVVSVRPQQLVGRLTVEVTVLERPGIAELEVLGLQNSRQRGSGRGPDDSGPPPSTVINQ 230
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
N+T A + FKP++ QQ K Q +L G+FIVRYDVNR + G IQ+ +GYFVHYFAP+
Sbjct: 231 NETFAKVVFKPSVVQQAKIA--QNGIL-GDFIVRYDVNREQSIGDIQVLDGYFVHYFAPK 287
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGL 1035
L +PKNV+FV+D+S SM G K++QT++AL IL DL +D FN+V FS WK L
Sbjct: 288 DLPPLPKNVVFVLDSSASMVGTKLRQTKDALFTILHDLRPQDHFNIVGFSNRIKVWKDHL 347
Query: 1036 LPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDG 1215
+ + ++ + K Y + GGT+IN A+ +QLL + RSV+L++ LTDG
Sbjct: 348 VSVTPNSIRDGKVYIHHMSPSGGTDINGALQRGIQLLNDYVAHNDIEDRSVSLVVFLTDG 407
Query: 1216 DPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDS 1395
PTVGET+ KI N REA G+ +F +G G DV + LEK++LEN GL RR++ED D+
Sbjct: 408 KPTVGETHTFKILNNTREATRGRVCIFTVGIGADVDFKLLEKLSLENCGLTRRVHEDHDA 467
Query: 1396 ALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLS 1575
QL FY E+ PLL + +YP + VE T+ F +F GSE+V+AGKL D++ D L
Sbjct: 468 RAQLIGFYDEIRTPLLSDIRVDYPPSLVERATRTLFPNYFNGSEIVIAGKLVDRAMDRLH 527
Query: 1576 AKVRGQLHMENVTFVMESRVAEQEAEF---LSPK-----YIFHSFMERLWAYLTIQQLL- 1728
+V + V + V ++ SP+ + +ERLW+YLT+++LL
Sbjct: 528 VEVTASNSKKFVVLKKDVPVEPRKVGIDVSQSPRPRGRGQEEPNHLERLWSYLTLKELLS 587
Query: 1729 AQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVA 1872
A S + E++ L A +L++N+ F+ P TSM + E + A
Sbjct: 588 AWLQSIEEPERERLRQEAQALAVNHHFLIPFTSMTLKSAPRTEAPEAA 635
>ref|XP_002707867.1| PREDICTED: calcium channel, voltage-dependent, alpha 2/delta subunit
4-like [Bos taurus].
Length = 1111
Score = 52.4 bits (124), Expect = 2e-06
Identities = 49/196 (25%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Frame = +1
Query: 871 PKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQ----WKKGLL 1038
PK+++ V+DTSGSM+G ++ + + IL LG D N+++++ +K L+
Sbjct: 267 PKDIVIVVDTSGSMKGLRMTIAKHTVSTILDTLGENDFVNIIAYNDYIHYIEPCFKGILV 326
Query: 1039 PASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGD 1218
A +N E K ++ +G ++ A+ A Q+L++ +E + I+L+TDG
Sbjct: 327 QADRDNREHFKQLVDELMVKGVGVVDRALREAFQILQQF-QEAGQGSLCNQAIMLITDG- 384
Query: 1219 PTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYA-FLEKMALENGGLARRIYEDSDS 1395
V + P + N D + +F G +VS+A L+ +A N G +I +D+
Sbjct: 385 -AVEDYEPVLEKYNWP---DRKVRVFTYLIGREVSFADRLKWIACNNKGYYTQISTLADA 440
Query: 1396 ALQLEDFYQEVANPLL 1443
+ ++ ++ P++
Sbjct: 441 QENVMEYLHVLSRPMV 456
>ref|XP_001787557.1| PREDICTED: voltage-gated calcium channel alpha(2)delta-4 subunit [Bos
taurus].
Length = 1111
Score = 52.4 bits (124), Expect = 2e-06
Identities = 49/196 (25%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Frame = +1
Query: 871 PKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQ----WKKGLL 1038
PK+++ V+DTSGSM+G ++ + + IL LG D N+++++ +K L+
Sbjct: 267 PKDIVIVVDTSGSMKGLRMTIAKHTVSTILDTLGENDFVNIIAYNDYIHYIEPCFKGILV 326
Query: 1039 PASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGD 1218
A +N E K ++ +G ++ A+ A Q+L++ +E + I+L+TDG
Sbjct: 327 QADRDNREHFKQLVDELMVKGVGVVDRALREAFQILQQF-QEAGQGSLCNQAIMLITDG- 384
Query: 1219 PTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYA-FLEKMALENGGLARRIYEDSDS 1395
V + P + N D + +F G +VS+A L+ +A N G +I +D+
Sbjct: 385 -AVEDYEPVLEKYNWP---DRKVRVFTYLIGREVSFADRLKWIACNNKGYYTQISTLADA 440
Query: 1396 ALQLEDFYQEVANPLL 1443
+ ++ ++ P++
Sbjct: 441 QENVMEYLHVLSRPMV 456
>ref|XP_002691213.1| PREDICTED: von Willebrand factor A domain containing 3B [Bos taurus].
Length = 1347
Score = 52.0 bits (123), Expect = 2e-06
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Frame = +1
Query: 868 IPKNVIFV-IDTSGSMRGRKIQQTREALIKILGD-LGSRDQFNLVSFSGEATQWKKGLLP 1041
+P + +++ IDTS SM G K+ + +I+++ + L + +FN V F +A+ W++ L+
Sbjct: 503 VPSDCVYILIDTSHSMTG-KLDLVKNKVIQLIQEQLKHKKKFNFVQFDAQASAWQEKLVE 561
Query: 1042 ASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDP 1221
+ +N++ A+++ I TN A+ +A A+ E +I LLTDG P
Sbjct: 562 INEDNLKGAQAWIRDIKIGSSTNTLSALQIAF-----ADEE-------TQVIYLLTDGRP 609
Query: 1222 TVGETNPSKIQKNVR--EAIDGQHSLFCLGFGFDVSYAFLEKMALENGG 1362
+ +P + V+ + I FC + +++ FL+ +A GG
Sbjct: 610 ---DQSPEMVMDQVKVFQKIPIYTISFC--YNDEIANGFLKDLASLTGG 653
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.317 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 93,625,398
Number of extensions: 2742273
Number of successful extensions: 10913
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 10861
Number of HSP's successfully gapped: 8
Length of query: 797
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 687
Effective length of database: 14,041,694
Effective search space: 9646643778
Effective search space used: 9646643778
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007767
(2392 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_848765.1| PREDICTED: similar to inter-alpha (globulin) in... 921 0.0
Alignment gi|XP_548489.2| PREDICTED: similar to inter-alpha (globulin) in... 568 e-161
Alignment gi|XP_535195.2| PREDICTED: similar to inter-alpha globulin inhi... 468 e-131
Alignment gi|XP_533794.2| PREDICTED: similar to Inter-alpha-trypsin inhib... 453 e-127
Alignment gi|XP_544264.2| PREDICTED: similar to inter-alpha trypsin inhib... 373 e-103
Alignment gi|XP_541846.2| PREDICTED: similar to inter-alpha (globulin) in... 156 1e-37
Alignment gi|XP_534930.2| PREDICTED: similar to voltage-gated calcium cha... 56 1e-07
Alignment gi|XP_536940.2| PREDICTED: hypothetical protein XP_536940 [Cani... 55 3e-07
Alignment gi|XP_533789.2| PREDICTED: similar to calcium channel, voltage-... 50 1e-05
Alignment gi|XP_531792.2| PREDICTED: hypothetical protein XP_531792 [Cani... 50 1e-05
>ref|XP_848765.1| PREDICTED: similar to inter-alpha (globulin) inhibitor H4 (plasma
Kallikrein-sensitive glycoprotein) [Canis familiaris].
Length = 826
Score = 921 bits (2380), Expect = 0.0
Identities = 502/754 (66%), Positives = 566/754 (75%)
Frame = +1
Query: 130 STTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSM 309
+TTA KNDI+IYS TVDSKVSSRFAHTVVTSRVVN+ VQEATFQ+ELPK+AFITNFSM
Sbjct: 25 ATTAQKNDISIYSFTVDSKVSSRFAHTVVTSRVVNRAETVQEATFQVELPKRAFITNFSM 84
Query: 310 IIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFEL 489
II+GVTYPGNI RGESAGLV+ATGRKTEQFQV+V+VAPAAKVTFEL
Sbjct: 85 IIEGVTYPGNIKEKAAAQEQYSAAVARGESAGLVKATGRKTEQFQVSVNVAPAAKVTFEL 144
Query: 490 VYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALTI 669
VYEELL R LGVYELLLK+QPQQLVKHLQMDIHIFEPQGISFL+TESTFMT+ELA ALTI
Sbjct: 145 VYEELLKRQLGVYELLLKVQPQQLVKHLQMDIHIFEPQGISFLKTESTFMTSELANALTI 204
Query: 670 SQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFA 849
SQNKTKAHI+FKP QK+ Q + VLDGNFIVRYDVNRT++GGSIQIENGYFVHYFA
Sbjct: 205 SQNKTKAHIQFKP-----QKTAGQLDKVLDGNFIVRYDVNRTLSGGSIQIENGYFVHYFA 259
Query: 850 PEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKK 1029
PEGL IPKNVIFVID SGSM GRKIQQTREALIKIL DL DQFNL+SFSG+ T WK
Sbjct: 260 PEGLPTIPKNVIFVIDKSGSMSGRKIQQTREALIKILDDLKPNDQFNLISFSGDVTHWKP 319
Query: 1030 GLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLT 1209
L+PAS ENV++AK YAA I A GGTNINDAML AV+LL+ AN++ELL SV+LIILLT
Sbjct: 320 LLVPASPENVDQAKRYAANIEAHGGTNINDAMLTAVRLLQSANQKELLSDGSVSLIILLT 379
Query: 1210 DGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDS 1389
DGDPTVGET+P++IQKNV++AIDGQ+SLFCLGFGFDVSY FLEK+AL+NGGLARRIYEDS
Sbjct: 380 DGDPTVGETSPARIQKNVQKAIDGQYSLFCLGFGFDVSYVFLEKLALDNGGLARRIYEDS 439
Query: 1390 DSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDV 1569
DSALQL+DFYQEVANPLL V FEYP NAV+ V+QDNFRL FKGSE+VV GKLRDQSPDV
Sbjct: 440 DSALQLQDFYQEVANPLLTAVTFEYPDNAVDKVSQDNFRLLFKGSEIVVVGKLRDQSPDV 499
Query: 1570 LSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSAS 1749
LSAKVRGQLHM+N+TF ES VAEQE EF SPKYIFHSFMERLWAYLTIQQLL Q VSAS
Sbjct: 500 LSAKVRGQLHMQNITFQTESSVAEQEKEFQSPKYIFHSFMERLWAYLTIQQLLEQMVSAS 559
Query: 1750 DAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNRQGNTHSGHYS 1929
AEK+ALE RAL+LSL+YSFVTPLTSMV+TKPEG+++S+VAEKPVE
Sbjct: 560 GAEKQALETRALNLSLSYSFVTPLTSMVVTKPEGEQRSEVAEKPVET------------- 606
Query: 1930 FQFHSVGDRTSRLTGGSSVDPVFSHRRGWKGQGPPGPLQPTRFSHPFSRITLDRVLPEVL 2109
+ +++T PV P P+Q P +L
Sbjct: 607 --------KRAKVTSSPGSTPVV-----------PAPIQAP---------------PVIL 632
Query: 2110 SVPDETSHDMDSRIIGATIPPPPARIQAPSVILPLPGQSVDQLCVDLKHSQGPMKLLSDP 2289
+P ++ + + I Q P +L P Q +
Sbjct: 633 MLPGQSVNRLCVDI---------KHSQGPMKLLSDPDQGI-------------------- 663
Query: 2290 GQRVEVTGHYGKEKARFSWIEVTFKHPPLQVLAS 2391
EVTG Y EKA+FSWIEVT K+ LQV AS
Sbjct: 664 ----EVTGQYETEKAQFSWIEVTLKNLQLQVRAS 693
>ref|XP_548489.2| PREDICTED: similar to inter-alpha (globulin) inhibitor H3 [Canis
familiaris].
Length = 897
Score = 568 bits (1463), Expect = e-161
Identities = 288/551 (52%), Positives = 393/551 (71%), Gaps = 2/551 (0%)
Frame = +1
Query: 250 QEATFQMELPKKAFITNFSMIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRK 429
+E +F +ELPK AFITNF++ IDGVTYPGN+ +G++AGLV+A+GRK
Sbjct: 81 KEVSFDVELPKTAFITNFTLTIDGVTYPGNVKEKEVAKKQYEKAVSQGKTAGLVKASGRK 140
Query: 430 TEQFQVAVSVAPAAKVTFELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGI 609
E+F V+V+VA +KVTFEL YEELL R G YE+ LK+QP+QLVKH +++ I+EPQGI
Sbjct: 141 LEKFTVSVNVAAGSKVTFELTYEELLKRRKGKYEMYLKVQPKQLVKHFEIEADIYEPQGI 200
Query: 610 SFLETESTFMTNEL-AEALTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDV 786
S L+ E++F+TN+L ALT S + K + FKP+L QQ+ P +++L+G+FI+ YDV
Sbjct: 201 STLDAEASFITNDLLGSALTKSFSGKKGRVSFKPSLDQQRSCPTCTDSLLNGDFIITYDV 260
Query: 787 NRTVTGGSIQIENGYFVHYFAPEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGD 966
NR + ++QI NGYFVH+FAP+GL +PKNV+FVID SGSM GRK++QT++AL+KILGD
Sbjct: 261 NRE-SPANVQIVNGYFVHFFAPQGLPVVPKNVVFVIDVSGSMHGRKMEQTKDALLKILGD 319
Query: 967 LGSRDQFNLVSFSGEATQWKKGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLL 1146
+ D N + FSG+ WK L+ A+ EN+EEA+ + IH +G TNIND +L + +L
Sbjct: 320 MKGEDYLNFILFSGDVITWKDDLVQATPENIEEARIFVKNIHDRGLTNINDGLLRGISML 379
Query: 1147 ERANREELLPARSVTLIILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSY 1326
RA E +P RS ++II+LTDGD VGE+ P KIQ+NVR AI G+ L+ LGFG +++Y
Sbjct: 380 NRAREEHRVPERSTSIIIMLTDGDANVGESRPEKIQENVRNAIGGKFPLYNLGFGNNLNY 439
Query: 1327 AFLEKMALENGGLARRIYEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFR 1506
FLE MALEN GLARRIYEDSD+ LQL+ FY+EVANPLL V EYP NA++ +TQ+ ++
Sbjct: 440 NFLESMALENHGLARRIYEDSDANLQLQGFYEEVANPLLTGVEVEYPENAIQDLTQNAYQ 499
Query: 1507 LFFKGSELVVAGKLRDQSPDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIFHSF 1686
F+ GSE+VVAG+L D+ + A V+G ++TF E + E E YIF ++
Sbjct: 500 HFYDGSEIVVAGRLLDEDMNNFKADVKGHGATNDLTFTEEVDMKEMEKALKEQDYIFGNY 559
Query: 1687 MERLWAYLTIQQLLAQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPE-GQEQS 1863
+ERLWAYLTI+QLL + +A EK+ L A+AL LSL Y FVTPLTSMV+TKPE ++Q+
Sbjct: 560 IERLWAYLTIEQLLEKRKNAHGEEKEKLTAQALDLSLKYHFVTPLTSMVVTKPEDNEDQT 619
Query: 1864 QVAEKPVENGN 1896
+A+KP E +
Sbjct: 620 AIADKPGEESD 630
>ref|XP_535195.2| PREDICTED: similar to inter-alpha globulin inhibitor H2 polypeptide
[Canis familiaris].
Length = 946
Score = 468 bits (1204), Expect = e-131
Identities = 253/595 (42%), Positives = 366/595 (61%), Gaps = 3/595 (0%)
Frame = +1
Query: 148 NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVT 327
+ + +YS V S ++SR A+T++ +++VN Q F +++PK AFI+NFSM +DG T
Sbjct: 68 DQVTLYSYKVQSTITSRMANTIIQTKLVNNSPQPQNVVFDVQIPKGAFISNFSMTVDGTT 127
Query: 328 YPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELL 507
+ +I +G++ GLVR+ E FQ V++ P AKV FEL Y+E+
Sbjct: 128 FTSSIREKTVGRALYSQARAKGKTTGLVRSRALDMENFQTEVNILPGAKVQFELHYQEVK 187
Query: 508 ARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALTISQNKTK 687
R LG YE L +QP +L KHL++D+ + EPQGI FL TF IS+ + K
Sbjct: 188 WRKLGSYEHRLHLQPGRLAKHLEVDVWVIEPQGIRFLHVPDTF-DGHFDGVPVISKGQQK 246
Query: 688 AHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLSA 867
AH+ FKP++++Q+K ET +DG +V YDVNR G +++ NGYFVH+FAPE L
Sbjct: 247 AHVSFKPSVARQRKCSNCSETAVDGELVVMYDVNREEKAGELEVFNGYFVHFFAPENLDP 306
Query: 868 IPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPAS 1047
IPKN++FVID SGSM G K++QT EA+ IL DL + DQF+++ F+ W+ L+ A+
Sbjct: 307 IPKNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRAEDQFSVIDFNHNVRTWRNDLVSAT 366
Query: 1048 AENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTV 1227
V +AK Y KI GGTNIN+A+L A+ +L AN LL SV+LIIL++DGDPTV
Sbjct: 367 RTQVTDAKKYIEKIQPSGGTNINEALLRAIFILNEANNLGLLDPESVSLIILVSDGDPTV 426
Query: 1228 GETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQL 1407
GE SKIQKNV++ I SLF LG GFDV Y FL++++ EN G+A+RIY + D++ QL
Sbjct: 427 GELKLSKIQKNVKQHIRDNISLFSLGIGFDVDYDFLKRLSNENRGIAQRIYGNQDTSSQL 486
Query: 1408 EDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKVR 1587
+ FY +V+ PLLR V F YP +V VTQ++F +F GSE+VVAGK + L + +
Sbjct: 487 KKFYNQVSTPLLRNVQFNYPHMSVSDVTQNSFHNYFGGSEIVVAGKFNPDKLEQLQSIIT 546
Query: 1588 GQLHMENVTFVMESRVAEQEAE-FLS-PKYIFHSFMERLWAYLTIQQLLAQ-TVSASDAE 1758
N V+E+ + E FLS K+ +F ++LWAYLTI QLLA+ +++ + A
Sbjct: 547 AT--SANTELVLETLAQMDDLEDFLSKDKHADPNFTKKLWAYLTINQLLAERSLAPTAAS 604
Query: 1759 KKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNRQGNTHSGH 1923
K+ + L +SL++ +TPLT+MVI G E+ P ++ G + G+
Sbjct: 605 KRKITKTILQMSLDHHILTPLTTMVIENEAGDERMLADSPPQDHSCCSGALYYGN 659
>ref|XP_533794.2| PREDICTED: similar to Inter-alpha-trypsin inhibitor heavy chain H1
precursor (ITI heavy chain H1) (Inter-alpha-inhibitor
heavy chain 1) (Inter-alpha-trypsin inhibitor complex
component III) (Serum-derived hyaluronan-associated
protein) (SHAP) [Canis familiaris].
Length = 910
Score = 453 bits (1165), Expect = e-127
Identities = 246/583 (42%), Positives = 364/583 (62%), Gaps = 4/583 (0%)
Frame = +1
Query: 154 INIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYP 333
+ I SL V+ KV+SRFAH V+TS+VVN +E +F +E+PK AFI++F++ DG +
Sbjct: 50 VTIRSLKVNCKVTSRFAHYVITSQVVNNADEAKEISFDVEIPKTAFISDFAITADGSAFI 109
Query: 334 GNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLAR 513
G+I GE+AGLVRA+GR EQF + +++ P +K TF L YEE+L R
Sbjct: 110 GDIKDKVTAWKQYRKAAISGENAGLVRASGRTMEQFTIHLTIGPRSKATFRLTYEEVLKR 169
Query: 514 HLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALTISQNKTK-A 690
L Y++++K++P+QLV H ++D+ IFEPQGIS L+ ++F++N+LA L K
Sbjct: 170 RLMQYDIVIKVKPKQLVHHFEIDVDIFEPQGISKLDAHASFLSNDLASQLVKKSFSGKQG 229
Query: 691 HIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLSAI 870
+ F PT+SQQQ P ++L+G+F V YDVNR + + N +F H+FAP+ L+ +
Sbjct: 230 RVLFHPTVSQQQSCPTCSTSLLNGDFKVTYDVNRDQLC-DLLVANNHFAHFFAPQNLTNM 288
Query: 871 PKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPASA 1050
KNV+FVID S SM G+K++QT+EAL+KILGD+ D F+LV F E WK L+ AS
Sbjct: 289 NKNVVFVIDISTSMEGQKVKQTKEALLKILGDMRPGDYFDLVLFGSEVQSWKGSLVQASP 348
Query: 1051 ENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVG 1230
N+ A+ + G TN+N +L +++L +A + + +++I+LTDG+PT G
Sbjct: 349 ANLRAAQDFVKHFFLAGATNLNGGLLRGIEILNQAQKNLPKLSNHASVLIMLTDGEPTEG 408
Query: 1231 ETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQLE 1410
T+ S+I KNVR AI G+ L+ LGFG +V + FL+ M++EN G A+RIYED D+A QL+
Sbjct: 409 VTDRSQILKNVRNAIRGKFPLYNLGFGDNVDFNFLDVMSMENNGRAQRIYEDHDAAQQLQ 468
Query: 1411 DFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKVRG 1590
FY +VANPLL V YP + + +TQ + +++GSE++VAG++ D A V
Sbjct: 469 GFYDQVANPLLVDVELLYPQDTISDLTQHRHKQYYEGSEIMVAGRIADHKLSSFKADVLA 528
Query: 1591 QLHMENVTFVMESRVAEQEAEFLSPK--YIFHSFMERLWAYLTIQQLLAQTVSASDAEKK 1764
H E F M V E++ + L + ++ + +ERLWAYLTIQ+LLA+ EK
Sbjct: 529 --HGEGQEFKMTCLVDEEKMKNLLRERGHMLENHIERLWAYLTIQELLAKRTKLEGKEKA 586
Query: 1765 ALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQ-VAEKPVEN 1890
A+AL +SL Y FVTPLTSM I ++ + V +KP E+
Sbjct: 587 DAAAKALQMSLAYQFVTPLTSMTIRGVADEDGLEPVVDKPPED 629
>ref|XP_544264.2| PREDICTED: similar to inter-alpha trypsin inhibitor heavy chain
precursor 5 isoform 1 [Canis familiaris].
Length = 893
Score = 373 bits (957), Expect = e-103
Identities = 224/579 (38%), Positives = 322/579 (55%), Gaps = 26/579 (4%)
Frame = +1
Query: 172 TVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXX 351
+V S + SR+A T V+ R++N+ S QE FQM++P AFITNF+M++ + G I
Sbjct: 12 SVKSTIISRYAFTTVSCRLLNRASEDQEIEFQMQIPAAAFITNFTMLLGDQVFQGEITER 71
Query: 352 XXXXXXXXXXXXRGESAGLVRATGRK-TEQFQVAVSVAPAAKVTFELVYEELLARHLGVY 528
S G K TE F+ +V + K F L YEELL R LG Y
Sbjct: 72 EKKNGDKLKEKRNKTSED----NGEKGTEMFRASVVIPSKDKAAFFLSYEELLQRRLGKY 127
Query: 529 ELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAE-----------ALTISQ 675
E ++ ++PQQLV L ++++I E G+ LE + + + I+Q
Sbjct: 128 EHVISVRPQQLVGRLMVEVNILERSGLESLEVLPLQHSRQKGSGRGEDDSGPPPSTVINQ 187
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
N T A + FKP++ QQ K Q +L G+FI+RYDVNR + G I++ NGYFVHYFAP
Sbjct: 188 NDTFAKVTFKPSVVQQAKIA--QNGIL-GDFIIRYDVNREQSIGDIEVLNGYFVHYFAPR 244
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGL 1035
L +PKNV+FV+D+S SM G K++QT++AL IL DL +D F+++ FS WK L
Sbjct: 245 DLPPLPKNVVFVLDSSASMVGTKLRQTKDALFTILHDLRPQDHFSIIGFSNRIKVWKDHL 304
Query: 1036 LPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDG 1215
+ + +NV + K Y + GGT+IN A+ A++LL + RSV+LI+ LTDG
Sbjct: 305 VSVTPDNVRDGKIYIHHMSPTGGTDINGALQRAIKLLNDYVAHNDIEDRSVSLIVFLTDG 364
Query: 1216 DPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDS 1395
PTVGET+ KI N +EA GQ +F +G G DV + LEK++LEN GL RR+ E+ D+
Sbjct: 365 KPTVGETHTLKILNNTKEAARGQVCIFTIGIGDDVDFKLLEKLSLENCGLTRRVLEEEDA 424
Query: 1396 ALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLS 1575
QL FY E+ PLL + +YP AVE T+ F +F GSE+V+AGKL D S + L
Sbjct: 425 GSQLIGFYDEIRTPLLSDIRVDYPRAAVEQTTRTLFPNYFNGSEIVIAGKLADSSAEQLH 484
Query: 1576 AKVRGQLHMENVTFVMESRVAEQE-------------AEFLSPKYIFHSFMERLWAYLTI 1716
+V + V + V +E PK++ ERLW YLT+
Sbjct: 485 VEVTASNSKKFVILKTDVPVGPREVGNGVAGSAGPEGGGAGGPKHV-----ERLWGYLTV 539
Query: 1717 QQLLAQTVSASDA-EKKALEARALSLSLNYSFVTPLTSM 1830
++LL+ + D EK+ +A +L++ Y F+TPLT+M
Sbjct: 540 RELLSSWLHGGDGPEKERARQKAQALAVAYRFLTPLTAM 578
>ref|XP_541846.2| PREDICTED: similar to inter-alpha (globulin) inhibitor H3 [Canis
familiaris].
Length = 243
Score = 156 bits (394), Expect = 1e-37
Identities = 76/144 (52%), Positives = 101/144 (70%)
Frame = +1
Query: 148 NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVT 327
N I +YS + KV+SRFAH VVT+R V + +E +F +ELPK AFITNF++ IDGVT
Sbjct: 41 NGIEVYSTKISCKVTSRFAHNVVTTRAVYRADTAKEVSFDVELPKTAFITNFTLTIDGVT 100
Query: 328 YPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELL 507
YPGN+ +G++AGLV+A+GRK E+F V+V+VA +KVTFEL YEELL
Sbjct: 101 YPGNVKEKEVAKKQYEKAVSQGKTAGLVKASGRKLEKFTVSVNVAAGSKVTFELTYEELL 160
Query: 508 ARHLGVYELLLKIQPQQLVKHLQM 579
R G YE+ LK+QP+QLVKH ++
Sbjct: 161 KRRKGKYEMYLKVQPKQLVKHFEV 184
>ref|XP_534930.2| PREDICTED: similar to voltage-gated calcium channel alpha(2)delta-4
subunit isoform 1 [Canis familiaris].
Length = 1121
Score = 56.2 bits (134), Expect = 1e-07
Identities = 80/346 (23%), Positives = 154/346 (44%), Gaps = 5/346 (1%)
Frame = +1
Query: 871 PKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQ----WKKGLL 1038
PK+++ V+DTSGSM+G ++ + + IL LG D N++++S +K L+
Sbjct: 272 PKDIVIVVDTSGSMKGLRMTIAKHTISTILDTLGENDFVNIIAYSDYIHYVEPCFKGTLV 331
Query: 1039 PASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGD 1218
A +N E K ++ +G +N A+ A Q+L++ +E + I+L+TDG
Sbjct: 332 QADRDNREHFKQLVDELMVKGVGIVNPALTEAFQILKQF-QEARQGSLCNQAIMLITDG- 389
Query: 1219 PTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEK-MALENGGLARRIYEDSDS 1395
V + P + N D + +F G +V++A K +A N G +I +D+
Sbjct: 390 -AVEDYKPVFEKYNWP---DRKIRVFTYLIGREVTFADRMKWIACNNKGYYTQISTLADA 445
Query: 1396 ALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLS 1575
+ ++ ++ P+ ++ ++ EA D+ L + L++ L + V S
Sbjct: 446 QENVMEYLHVLSRPM--VINHDHDITWTEAY-MDSKLLTSQAQNLML---LTTVAMPVFS 499
Query: 1576 AKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSASDA 1755
K + H + V+ S VA +E L+P+Y + Y + +S D
Sbjct: 500 KKNETRSH-GILLGVVGSDVALRELMKLAPRYKL-----GVHGYAFLNTNNGYILSHPDL 553
Query: 1756 EKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENG 1893
E + L NY+ S+ +++ E ++Q++ + NG
Sbjct: 554 RPLYREGKKLKPKPNYN------SVDLSEVEWEDQAETLRTAMING 593
>ref|XP_536940.2| PREDICTED: hypothetical protein XP_536940 [Canis familiaris].
Length = 1110
Score = 55.1 bits (131), Expect = 3e-07
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Frame = +1
Query: 868 IPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSR--DQFNLVSFSGEATQWKKGLLP 1041
+ + V ++DTSGSM G +QQ + L+ ++ + + D FNL+SF+ + W+ L+
Sbjct: 882 LERKVCILVDTSGSM-GPYLQQVKTELVLLIWEQLRKHCDSFNLLSFAEDLQLWRDTLVE 940
Query: 1042 ASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDP 1221
+ E EA + + A G T++ A+L A V + LLTDG P
Sbjct: 941 TTDEACHEAMQWVTHLRAHGSTSVLQALLKAFTF------------HDVEGLYLLTDGKP 988
Query: 1222 TVGETNPSKIQKNVR---EAIDGQHSLFCLGFGFDVSYAFLEKMALENGG 1362
+T+ S I + V+ E D + L + FL +A GG
Sbjct: 989 ---DTSCSLILREVQRLTETGDVKMHTIALNHSGRAAGDFLRNLAALTGG 1035
>ref|XP_533789.2| PREDICTED: similar to calcium channel, voltage-dependent, alpha
2/delta 3 subunit [Canis familiaris].
Length = 1128
Score = 50.1 bits (118), Expect = 1e-05
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Frame = +1
Query: 871 PKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKK----GLL 1038
PK+V+ ++D SGSM+G ++ ++ + IL LG D FN+++++ E + L+
Sbjct: 291 PKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNGTLV 350
Query: 1039 PASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGD 1218
A N E + + K+ A+G ++ A+ A +L N S I+L+TDG
Sbjct: 351 QADRTNKEHFREHLDKLFAKGIGMLDIALNEAFNILSDFNHTGQGSICS-QAIMLITDGA 409
Query: 1219 PTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYA-FLEKMALENGGLARRIYEDSDS 1395
+T +K R+ +F G + ++A L+ MA N G +I +D
Sbjct: 410 VDTYDTIFAKYNWPDRKV-----RIFTYLIGREAAFADNLKWMACANKGFFTQISTLADV 464
Query: 1396 ALQLEDFYQEVANP 1437
+ ++ ++ P
Sbjct: 465 QENVMEYLHVLSRP 478
>ref|XP_531792.2| PREDICTED: hypothetical protein XP_531792 [Canis familiaris].
Length = 1465
Score = 50.1 bits (118), Expect = 1e-05
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Frame = +1
Query: 880 VIFVIDTSGSMRGRKIQQTREALIKILGD-LGSRDQFNLVSFSGEATQWKKGLLPASAEN 1056
+ +IDTS SM+ K+ ++ +I+ + + L + +FN V F +A W++ L+ + +N
Sbjct: 710 IYILIDTSHSMKS-KLDLVKDKIIQFIQEQLKYKRKFNFVQFDAQAVAWQEKLVEINEDN 768
Query: 1057 VEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVGET 1236
+ A+S+ I TN A+ +A A++E +I LLTDG P +
Sbjct: 769 LRGAQSWIRDIQIGSSTNTLHALQIAF-----ADKE-------TQVIYLLTDGRP---DQ 813
Query: 1237 NPSKIQKNVREAIDGQHSLFCLGFGF--DVSYAFLEKMALENGG 1362
P + + V+ + + ++ + F + +++ FL+++A GG
Sbjct: 814 PPEMVIEQVK--VFQKIPIYTISFNYNDEIANGFLKELASLTGG 855
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.317 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 97,652,889
Number of extensions: 2817477
Number of successful extensions: 11220
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 11166
Number of HSP's successfully gapped: 11
Length of query: 797
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 686
Effective length of database: 15,174,208
Effective search space: 10409506688
Effective search space used: 10409506688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007767
(2392 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001001537.1| inter-alpha-trypsin inhibitor heavy chain H4... 1393 0.0
Alignment gi|NP_001193278.1| inter-alpha-trypsin inhibitor heavy chain H3... 598 e-171
Alignment gi|NP_999068.1| inter-alpha-trypsin inhibitor heavy chain H2 pr... 478 e-135
Alignment gi|NP_999089.1| inter-alpha-trypsin inhibitor heavy chain H1 pr... 470 e-132
Alignment gi|XP_003130868.1| PREDICTED: inter-alpha-trypsin inhibitor hea... 369 e-102
Alignment gi|XP_003354774.1| PREDICTED: von Willebrand factor A domain-co... 52 1e-06
Alignment gi|XP_003355658.1| PREDICTED: voltage-dependent calcium channel... 51 3e-06
>ref|NP_001001537.1| inter-alpha-trypsin inhibitor heavy chain H4 [Sus scrofa].
Length = 921
Score = 1393 bits (3606), Expect = 0.0
Identities = 729/792 (92%), Positives = 735/792 (92%), Gaps = 14/792 (1%)
Frame = +1
Query: 58 MKTLSPTGAYGXXXXXXXXXXXXQSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNK 237
MKTLSPTG YG QSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNK
Sbjct: 1 MKTLSPTG-YGLLLVLPLLLAVLQSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNK 59
Query: 238 GSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRA 417
GSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNI RGESAGLVRA
Sbjct: 60 GSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIKEKAAAQEQYSAVA-RGESAGLVRA 118
Query: 418 TGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFE 597
TGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFE
Sbjct: 119 TGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFE 178
Query: 598 PQGISFLETESTFMTNELAEALTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVR 777
PQGISFLETESTFMTNELAEALTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVR
Sbjct: 179 PQGISFLETESTFMTNELAEALTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVR 238
Query: 778 YDVNRTVTGGSIQIENGYFVHYFAPEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKI 957
YDVNRTVTGGSIQIENGYFVHYFAPE SAIPKNVIFVIDTSGSMRGRKIQQTREALIKI
Sbjct: 239 YDVNRTVTGGSIQIENGYFVHYFAPEVWSAIPKNVIFVIDTSGSMRGRKIQQTREALIKI 298
Query: 958 LGDLGSRDQFNLVSFSGEATQWKKGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAV 1137
LGDLGSRDQFNLVSFSGEA ++ + ASAENVEEAKSYAA+IHAQGGTNINDAMLMAV
Sbjct: 299 LGDLGSRDQFNLVSFSGEAP--RRRAVAASAENVEEAKSYAAEIHAQGGTNINDAMLMAV 356
Query: 1138 QLLERANREELLPARSVTLIILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFD 1317
QLLERANREELLPARSVT IILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFD
Sbjct: 357 QLLERANREELLPARSVTFIILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFD 416
Query: 1318 VSYAFLEKMALENGGLARRIYEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQD 1497
V YAFLEKMALENGGLARRIYEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVE VTQD
Sbjct: 417 VPYAFLEKMALENGGLARRIYEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEEVTQD 476
Query: 1498 NFRLFFKGSELVVAGKLRDQSPDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIF 1677
NFRLFFKGSELVVAGKLRDQSPDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIF
Sbjct: 477 NFRLFFKGSELVVAGKLRDQSPDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIF 536
Query: 1678 HSFMERLWAYLTIQQLLAQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQE 1857
HSFMERLWAYLTIQQLLAQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQE
Sbjct: 537 HSFMERLWAYLTIQQLLAQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQE 596
Query: 1858 QSQVAEKPVENGNRQGNTHSGHYSFQFHSVGDRTSRLTGGSSVDPVFSHRRGWKGQ---- 2025
QSQVAEKPVENGNRQGNTHSGH SFQFHSVGDRTSRLTGGSSVDPVFSHRRGWKGQ
Sbjct: 597 QSQVAEKPVENGNRQGNTHSGHSSFQFHSVGDRTSRLTGGSSVDPVFSHRRGWKGQAQGF 656
Query: 2026 ----------GPPGPLQPTRFSHPFSRITLDRVLPEVLSVPDETSHDMDSRIIGATIPPP 2175
GPPGPLQPTRFSHPFSRITLDRVLPEVLSVPDETSHDMDSRIIGATIPPP
Sbjct: 657 EKMSYLPPRLGPPGPLQPTRFSHPFSRITLDRVLPEVLSVPDETSHDMDSRIIGATIPPP 716
Query: 2176 PARIQAPSVILPLPGQSVDQLCVDLKHSQGPMKLLSDPGQRVEVTGHYGKEKARFSWIEV 2355
PARIQAPSVILPLPGQSVDQLCVDLKHSQGP+KLLSDPGQ VEVTGHY +EKARFSWIEV
Sbjct: 717 PARIQAPSVILPLPGQSVDQLCVDLKHSQGPVKLLSDPGQGVEVTGHYEREKARFSWIEV 776
Query: 2356 TFKHPPLQVLAS 2391
TFKHPPLQV AS
Sbjct: 777 TFKHPPLQVRAS 788
>ref|NP_001193278.1| inter-alpha-trypsin inhibitor heavy chain H3 [Sus scrofa].
Length = 889
Score = 598 bits (1541), Expect = e-171
Identities = 306/582 (52%), Positives = 409/582 (70%), Gaps = 2/582 (0%)
Frame = +1
Query: 148 NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVT 327
N I +YS V KVSSRFAH VVT+R VN +E +F +ELPK AFITNF++ IDGVT
Sbjct: 41 NGIEVYSTKVSCKVSSRFAHNVVTTRAVNHADTAKEVSFDVELPKTAFITNFTLTIDGVT 100
Query: 328 YPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELL 507
YPGN+ + ++AGLV+A+GRK E+F V+V+VA +KVTFEL YEELL
Sbjct: 101 YPGNVKEKEVAKKQYEKAVSQDKTAGLVKASGRKLEKFTVSVNVAAGSKVTFELTYEELL 160
Query: 508 ARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNEL-AEALTISQNKT 684
RH G YE+ LK+QP+QLVKH ++ IFEPQGIS L+ E++F+TN+L ALT S +
Sbjct: 161 KRHKGKYEMYLKVQPKQLVKHFEITADIFEPQGISTLDAEASFITNDLLGSALTKSFSGK 220
Query: 685 KAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLS 864
K H+ FKP+L QQ+ P +++L G+FI+ YDVNR + ++QI NGYFVH+FAP+GL
Sbjct: 221 KGHVSFKPSLDQQRSCPTCTDSLLKGDFIITYDVNRE-SPANVQIVNGYFVHFFAPQGLP 279
Query: 865 AIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPA 1044
+PKNV+FVID SGSM GRK++QTR+AL+KIL D+ D N V FSG+ T WK L+ A
Sbjct: 280 VVPKNVVFVIDVSGSMYGRKMEQTRDALLKILDDIKEDDYLNFVLFSGDVTTWKDSLVQA 339
Query: 1045 SAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPT 1224
+ EN+++A+ + I QG TNIND +L + +L +A E +P RS ++II+LTDGD
Sbjct: 340 TPENIQKAREFVRNIRDQGMTNINDGLLTGISMLNKAREEHKVPERSTSIIIMLTDGDAN 399
Query: 1225 VGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQ 1404
+G + P KIQ+NVR AI G+ L+ LGFG +++Y FLE MALEN GLARRIYEDSD+ LQ
Sbjct: 400 MGVSKPEKIQENVRNAIGGKFPLYNLGFGNNLNYNFLESMALENHGLARRIYEDSDANLQ 459
Query: 1405 LEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKV 1584
L+ FY+EVANPLL V YP NA++ +TQ+ ++ F+ GSE+VVAG+L D+ + A V
Sbjct: 460 LQGFYEEVANPLLTSVEVGYPENAIQDLTQNTYQHFYDGSEIVVAGRLADEDMNSFRADV 519
Query: 1585 RGQLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSASDAEKK 1764
+G + ++TF E + E E YIF +++ERLWAYLTI+QLL + +A EK+
Sbjct: 520 KGHGAINDLTFTEEVDMKEMEEALKERDYIFGNYIERLWAYLTIEQLLEKRKNAQGKEKE 579
Query: 1765 ALEARALSLSLNYSFVTPLTSMVITKPEGQE-QSQVAEKPVE 1887
L A+AL LSL Y FVTPLTSMV+TKPE E Q+ +A+KP E
Sbjct: 580 TLTAQALDLSLKYHFVTPLTSMVVTKPEDNENQTAIADKPGE 621
>ref|NP_999068.1| inter-alpha-trypsin inhibitor heavy chain H2 precursor [Sus scrofa].
Length = 935
Score = 478 bits (1230), Expect = e-135
Identities = 296/759 (38%), Positives = 421/759 (55%), Gaps = 14/759 (1%)
Frame = +1
Query: 148 NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVT 327
+ + +YS V S ++SR A+TV+ ++VVN Q+ F +++PK AFI+NFSM +DG
Sbjct: 57 DQVTLYSYKVQSTITSRMANTVIQTKVVNHSPEPQDVVFDIQIPKGAFISNFSMTVDGTK 116
Query: 328 YPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELL 507
+ +I +G++AGLVR+ E F+ V++AP AKV FEL Y+E+
Sbjct: 117 FTSSIKEKTVGRALYWQARAKGKTAGLVRSRALDMENFKTEVNIAPGAKVQFELHYQEVK 176
Query: 508 ARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALTISQNKTK 687
R+LG YE + +QP +L KHL++D+ I EPQG+ FL TF + + + K
Sbjct: 177 WRNLGSYEHRIHLQPGRLAKHLEVDVQIIEPQGLRFLHVLDTF-DGHFDGVPVVVKGQQK 235
Query: 688 AHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLSA 867
AH+ FKPT++QQ+K P ET +DG +V YDVNR G +Q+ NGYFVH+FAPE +
Sbjct: 236 AHVAFKPTVAQQRKCPSCSETAVDGELVVMYDVNREQKAGELQLFNGYFVHFFAPESMDP 295
Query: 868 IPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPAS 1047
IPKN++FVID SGSM G K++QT EA+ IL DL + DQF+LV F+ W+ L+ A+
Sbjct: 296 IPKNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRAEDQFSLVDFNHNIRTWRNDLVSAT 355
Query: 1048 AENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTV 1227
V +AK+Y KI GGTNIN+A+L A+ +L AN LL SV+LIIL++DGDPTV
Sbjct: 356 KTQVADAKTYIEKIQPSGGTNINEALLRAIFILNEANNLGLLDPNSVSLIILVSDGDPTV 415
Query: 1228 GETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQL 1407
GE SKIQKNV++ I SLF LG GFDV Y FL++++ +N G+A+RIY + D+A QL
Sbjct: 416 GELQLSKIQKNVKQNIQDNVSLFSLGIGFDVDYDFLKRLSNDNRGMAQRIYGNQDTASQL 475
Query: 1408 EDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKVR 1587
+ FY +V+ PLLR V F YP +V VTQ++F +F GSE+VVAGK + + L +
Sbjct: 476 KKFYNQVSTPLLRNVQFNYPQASVTDVTQNSFPNYFGGSEIVVAGKFNPEKLEQLQGIIT 535
Query: 1588 GQLHMENVTFVMESRVAEQ---EAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSA-SDA 1755
NV V+E+ +AE EA ++ F ++LWAYLTI QLL + A S A
Sbjct: 536 AT--SANVELVLET-LAEMDGLEAFLAKDRHADPDFTKKLWAYLTINQLLDERSRAPSAA 592
Query: 1756 EKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNRQGNTHSGHYSFQ 1935
KK + L +SL++ VTPLT+MV+ G E+ +A+ P ++ + T
Sbjct: 593 VKKKITKSILQMSLDHHIVTPLTAMVVENEAGDER-MLADAPPQDQSCCSGT-------- 643
Query: 1936 FHSVGDRTSRLTGGSSVDPVFSHRRGWKGQGPPGPLQPTRFSHPFSRITLDRVLPEVLSV 2115
L G V P P + P P R+ L V P V
Sbjct: 644 ----------LNYGRKVTP----------NSLPSWVNPL----PTPRVPLPAVGPSV--- 676
Query: 2116 PDETSHDMDSRIIGATIPPPPARIQ-APSVILPLPGQSVDQLCVDLKHSQGP-MKLLSDP 2289
I AT PP R++ P I+ LP +S +C ++ G + L+SDP
Sbjct: 677 ------------IEATPPPHVMRVENDPHFIIYLP-RSQQNICFNIDSEPGKILNLVSDP 723
Query: 2290 GQRVEVTGHY--------GKEKARFSWIEVTFKHPPLQV 2382
+ + G GK F I F+H ++V
Sbjct: 724 ESGIVINGQLISAKKLKDGKLSTYFGKIGFYFQHEDVKV 762
>ref|NP_999089.1| inter-alpha-trypsin inhibitor heavy chain H1 precursor [Sus scrofa].
Length = 902
Score = 470 bits (1210), Expect = e-132
Identities = 257/593 (43%), Positives = 383/593 (64%), Gaps = 6/593 (1%)
Frame = +1
Query: 130 STTAHK--NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNF 303
ST +K N + I SL V+ KV+SRFAH VVTS+VVN + +E F +E+PK AFI++F
Sbjct: 33 STKGNKAVNGVVIRSLKVNCKVTSRFAHYVVTSQVVNNTNKPKEVAFDVEIPKTAFISDF 92
Query: 304 SMIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTF 483
++ D T+ G+I GE++GLVRA+GR EQF + V++ P +K TF
Sbjct: 93 AITADENTFVGDIKDKVTAWKQYRKAAISGENSGLVRASGRTMEQFTIHVTIGPRSKATF 152
Query: 484 ELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELA-EA 660
+L YEE+L R L Y++++K++P+QLV+H ++D+ IFEPQGIS L+ +++F++ E A +
Sbjct: 153 QLTYEEVLRRKLTQYDIVIKVKPKQLVQHFEIDVDIFEPQGISKLDAQASFLSKEAAAQL 212
Query: 661 LTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVH 840
+ S + K H+ F+PT+ QQQ T+L+G+F V YDVNR + + N YF H
Sbjct: 213 IKKSFSGKKGHVLFRPTVGQQQSCSTCSTTLLNGDFKVTYDVNREKLC-DLLVANNYFAH 271
Query: 841 YFAPEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQ 1020
+FAP+ L+ + KNV+FVID S SM G+K++QT+EAL+KIL DL D F+LV F
Sbjct: 272 FFAPQNLTKLNKNVVFVIDISSSMEGQKVKQTKEALLKILSDLKPGDYFDLVLFGSAVQS 331
Query: 1021 WKKGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLII 1200
W+ L+ AS N++ A+SY + G TN+N +L +++L +A + +++I
Sbjct: 332 WRGSLVQASTANLDAARSYVRQFSLAGSTNLNGGLLRGIEILNKAQGSLPEFSNRASILI 391
Query: 1201 LLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIY 1380
+LTDG+PT G T+ S+I KNVR+AI G+ L+ LGFG DV + FLE ALEN G A+RIY
Sbjct: 392 MLTDGEPTEGVTDRSQILKNVRDAIRGRFPLYNLGFGHDVEWNFLEVRALENNGRAQRIY 451
Query: 1381 EDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQS 1560
ED DSA QL+ FY +VANPLL+ V +YP++AV A+TQ + +++GSE+ VAG++ D
Sbjct: 452 EDHDSAQQLQGFYDQVANPLLKDVELQYPADAVLALTQHRHKQYYEGSEITVAGRIADNK 511
Query: 1561 PDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPK--YIFHSFMERLWAYLTIQQLLAQ 1734
A V+ + F V E+E + L + ++ +++ERLWAYLTIQ+LLA+
Sbjct: 512 LSSFKADVQAS---GDQGFKTTCLVDEEEMKKLLQERGHMLENYVERLWAYLTIQELLAK 568
Query: 1735 TVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQ-VAEKPVEN 1890
+ AEK ++ A+AL +SL+Y FVTPLTSM I ++ + V +KP+E+
Sbjct: 569 RMKLEWAEKASVSAKALQMSLDYQFVTPLTSMTIRGMADKDGLEPVIDKPLED 621
>ref|XP_003130868.1| PREDICTED: inter-alpha-trypsin inhibitor heavy chain H5-like [Sus
scrofa].
Length = 944
Score = 369 bits (948), Expect = e-102
Identities = 226/574 (39%), Positives = 323/574 (56%), Gaps = 21/574 (3%)
Frame = +1
Query: 172 TVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXX 351
+V S + SR+A T V+ R++N+ S QE TFQM++P AFITNF+M+I Y G I
Sbjct: 55 SVKSTIISRYAFTTVSCRMLNRASKDQEVTFQMQIPAAAFITNFTMLIGNQVYQGEITER 114
Query: 352 XXXXXXXXXXXXRGESAGLVRATGRK-TEQFQVAVSVAPAAKVTFELVYEELLARHLGVY 528
R ++A G K TE F+ +V + K F L YEELL R LG Y
Sbjct: 115 DEKPGGQVKEK-RNKTA---EDNGEKGTEMFRASVVLPSKDKAAFFLSYEELLQRRLGKY 170
Query: 529 ELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAE-----------ALTISQ 675
E ++ ++PQQLV L +++++ E GI+ LE + + I
Sbjct: 171 EHVVSVRPQQLVGRLTVEVNVLERSGIAELEVLRLQNSRRKGSGSGEDDSGPPPSTVIHH 230
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
N+T AH+ FKP++ QQ K Q +L G+FIVRYDV+R + G IQ+ NGYFVHYFAP
Sbjct: 231 NETFAHVVFKPSVVQQAKIA--QNGIL-GDFIVRYDVSREQSIGDIQVLNGYFVHYFAPR 287
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGL 1035
L +PKNV+FV+D+S SM G K++QT++AL IL DL +D FN++ FS WK L
Sbjct: 288 DLPPLPKNVVFVLDSSASMVGAKLRQTKDALFTILHDLRPQDHFNIIGFSNRIKVWKDHL 347
Query: 1036 LPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDG 1215
+ + NV + K Y + GGT+IN A+ + LL + L RSV+LI+ LTDG
Sbjct: 348 VSVTPNNVRDGKVYIHHMSPSGGTDINGALQTGIALLHDSVARHDLEDRSVSLIVFLTDG 407
Query: 1216 DPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDS 1395
PTVGET+ KI N REA G+ +F +G G DV + LEK++LEN G R ++ED D+
Sbjct: 408 KPTVGETHTPKILNNTREAARGRVCIFTVGIGDDVDFRLLEKLSLENCGFTRHVHEDEDA 467
Query: 1396 ALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLS 1575
QL FY E+ PLL + +YP +AVE VT+ F +F GSE++VAGKL D++ D L
Sbjct: 468 GAQLIGFYDEIRTPLLSDIRVDYPPDAVEQVTRTLFPNYFNGSEIIVAGKLADRAKDRLH 527
Query: 1576 AKVRGQLHMENVTFVMESRVAEQEAEFLSP--------KYIFHSFMERLWAYLTIQQLLA 1731
+V + V + V + P + +ERLW+YLT+++L +
Sbjct: 528 VEVTASNSKKFVVLKKDVPVEPRWGGSGGPGGPGPQGGGQEDPNPLERLWSYLTLKELQS 587
Query: 1732 QTV-SASDAEKKALEARALSLSLNYSFVTPLTSM 1830
+ S + E+ L +A +L++ F+TP TSM
Sbjct: 588 SWLQSDQEQERDRLRRKAQALAVAGRFLTPFTSM 621
>ref|XP_003354774.1| PREDICTED: von Willebrand factor A domain-containing protein 3B,
partial [Sus scrofa].
Length = 919
Score = 52.4 bits (124), Expect = 1e-06
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Frame = +1
Query: 880 VIFVIDTSGSMRGRKIQQTREALIKILGD-LGSRDQFNLVSFSGEATQWKKGLLPASAEN 1056
V +IDTS SM+G K+ + +I+++ + L + +FN V F +A W++ L+ + +N
Sbjct: 503 VYILIDTSHSMKG-KLDLVKNKIIQLIQEQLKYKRKFNFVQFDAQAVAWREKLVEINEDN 561
Query: 1057 VEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVGET 1236
++ A+++ I TN +A+ +A A++E +I LLTDG P +
Sbjct: 562 LKAAQAWLRDIKVGSSTNTLNALKVAF-----ADKE-------TQVIYLLTDGRP---DQ 606
Query: 1237 NPSKI--QKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGG 1362
P + Q V + I FC + +++ FL+++A GG
Sbjct: 607 PPEMVIDQVKVFQKIPIYTISFC--YNDEIANGFLKEVASLTGG 648
>ref|XP_003355658.1| PREDICTED: voltage-dependent calcium channel subunit alpha-2/delta-4,
partial [Sus scrofa].
Length = 608
Score = 51.2 bits (121), Expect = 3e-06
Identities = 48/196 (24%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Frame = +1
Query: 871 PKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQ----WKKGLL 1038
PK+++ ++DTSGSM+G ++ + + IL LG D N+++++ +K L+
Sbjct: 271 PKDIVILVDTSGSMKGLRMTIAKHTVSTILDTLGENDFVNIIAYNDYIHYIEPCFKGILV 330
Query: 1039 PASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGD 1218
A +N E K ++ +G ++ A+ A Q+L++ +E + I+L+TDG
Sbjct: 331 QADRDNREHFKQLVDELMVKGVGVVDRALSEAFQILQQF-QEVRRGSLCNQAIMLITDG- 388
Query: 1219 PTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYA-FLEKMALENGGLARRIYEDSDS 1395
V + P + N D + +F G +VS+A L+ +A N G +I +D+
Sbjct: 389 -AVEDYEPVFQKYNWP---DRKVRVFTYLIGREVSFADRLKWIACNNKGYYTQISTLADA 444
Query: 1396 ALQLEDFYQEVANPLL 1443
+ ++ ++ P++
Sbjct: 445 QENVMEYLHVLSRPMV 460
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.317 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 60,450,491
Number of extensions: 1769096
Number of successful extensions: 7070
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 7036
Number of HSP's successfully gapped: 7
Length of query: 797
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 690
Effective length of database: 8,679,953
Effective search space: 5989167570
Effective search space used: 5989167570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007767
(2392 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001152771.1| inter alpha-trypsin inhibitor, heavy chain 4... 931 0.0
Alignment gi|NP_061216.2| inter alpha-trypsin inhibitor, heavy chain 4 is... 927 0.0
Alignment gi|NP_032433.2| inter-alpha-trypsin inhibitor heavy chain H3 pr... 601 e-172
Alignment gi|NP_032432.2| inter-alpha-trypsin inhibitor heavy chain H1 pr... 471 e-132
Alignment gi|NP_034712.2| inter-alpha-trypsin inhibitor heavy chain H2 [M... 456 e-128
Alignment gi|NP_766059.1| inter-alpha-trypsin inhibitor heavy chain H5 pr... 390 e-108
Alignment gi|XP_003085348.1| PREDICTED: LOW QUALITY PROTEIN: inter-alpha ... 382 e-106
Alignment gi|XP_003086909.1| PREDICTED: LOW QUALITY PROTEIN: inter-alpha ... 382 e-106
Alignment gi|XP_003084486.1| PREDICTED: LOW QUALITY PROTEIN: von Willebra... 54 4e-07
Alignment gi|XP_003086202.1| PREDICTED: LOW QUALITY PROTEIN: von Willebra... 54 4e-07
>ref|NP_001152771.1| inter alpha-trypsin inhibitor, heavy chain 4 isoform 2 [Mus
musculus].
Length = 941
Score = 931 bits (2407), Expect = 0.0
Identities = 504/810 (62%), Positives = 604/810 (74%), Gaps = 32/810 (3%)
Frame = +1
Query: 58 MKTLSPTGAYGXXXXXXXXXXXXQSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNK 237
MK+ +P + +TTA KN I+IYSLTVDS+VSSRFAHTVVTSRVVN+
Sbjct: 1 MKSPAPAHMWNLVLFLPSLLAVLPTTTAEKNGIDIYSLTVDSRVSSRFAHTVVTSRVVNR 60
Query: 238 GSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRA 417
AVQEATFQ+ELP+KAFITNFSMIIDGVTYPG + RGESAG+V+
Sbjct: 61 ADAVQEATFQVELPRKAFITNFSMIIDGVTYPGVVKEKAEAQKQYSAAVGRGESAGIVKT 120
Query: 418 TGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFE 597
TGR+TE+F+V+V+VAP +K+TFEL+Y+ELL R LG+YELLLK++PQQLVKHLQMDI+IFE
Sbjct: 121 TGRQTEKFEVSVNVAPGSKITFELIYQELLQRRLGMYELLLKVRPQQLVKHLQMDIYIFE 180
Query: 598 PQGISFLETESTFMTNELAEALTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVR 777
PQGIS LETESTFMT ELA ALT SQNKTKAHIRFKPTLSQQQKS +Q+TVL+G+FIVR
Sbjct: 181 PQGISILETESTFMTPELANALTTSQNKTKAHIRFKPTLSQQQKSQSEQDTVLNGDFIVR 240
Query: 778 YDVNRTVTGGSIQIENGYFVHYFAPEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKI 957
YDVNR+ +GGSIQIE GYFVH+FAPE L + KNVIFVID SGSM G+KIQQTREAL+KI
Sbjct: 241 YDVNRSDSGGSIQIEEGYFVHHFAPENLPTMSKNVIFVIDKSGSMSGKKIQQTREALVKI 300
Query: 958 LGDLGSRDQFNLVSFSGEATQWKKGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAV 1137
L DL +DQFNL+ FSGEA QWK+ L+ A+ EN+ +A +YA++I A GGTNIN+A+L+AV
Sbjct: 301 LKDLSPQDQFNLIEFSGEANQWKQSLVQATEENLNKAVNYASRIRAHGGTNINNAVLLAV 360
Query: 1138 QLLERANREELLPARSVTLIILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFD 1317
+LL+R+N+ ELLP++SV+LIILLTDGDPTVGETNP+ IQ NVREAI+GQ+SLFCLGFGFD
Sbjct: 361 ELLDRSNQAELLPSKSVSLIILLTDGDPTVGETNPTIIQNNVREAINGQYSLFCLGFGFD 420
Query: 1318 VSYAFLEKMALENGGLARRIYEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQD 1497
V+Y FLEKMAL+NGGLARRIYEDSDSALQL+DFY EVANPLL VAFEYPS+AVE VT+
Sbjct: 421 VNYPFLEKMALDNGGLARRIYEDSDSALQLQDFYHEVANPLLSSVAFEYPSDAVEEVTRY 480
Query: 1498 NFRLFFKGSELVVAGKLRDQSPDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIF 1677
F+ FKGSE+VVAGKL+DQ PDVL AKV GQ+HM+N+TF E+ VA+QE EF SPKYIF
Sbjct: 481 KFQHHFKGSEMVVAGKLQDQGPDVLLAKVSGQMHMQNITFQTEASVAQQEKEFKSPKYIF 540
Query: 1678 HSFMERLWAYLTIQQLLAQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQE 1857
H+FMERLWA LTIQQ L Q +SAS AE +ALEA+ L+LSL Y+FVTPLT MV+TKPEGQE
Sbjct: 541 HNFMERLWALLTIQQQLEQRISASGAELEALEAQVLNLSLKYNFVTPLTHMVVTKPEGQE 600
Query: 1858 QSQVAEKPVENGNRQGNTHSGHYSFQFHSV--GDRTSRLTGGSSV------DPVFSHRR- 2010
Q QVAEKPVE G+ + F G + + GS D V + R+
Sbjct: 601 QFQVAEKPVEVGDGMQRLPLAAQAHPFRPPVRGSKLMTVLKGSRSQIPRLGDAVRASRQY 660
Query: 2011 ---GWKG-QGPPG---PLQPTRFSHP-------FSRITLDRVLPEVLSVPDETSHDMDSR 2148
G+ G GPPG P P F P S +L +LS+P + D
Sbjct: 661 IPPGFPGPPGPPGFPAPPGPPGFPAPPGPPLASGSDFSLQPSYERMLSLPSVAQYPADPH 720
Query: 2149 II------GATIP---PPPARIQAPSVILPLPGQSVDQLCVDLKHSQGPMKLLSDPGQRV 2301
++ +TIP P P Q P++ LPLPG SVDQLCVD+ HS+ PMKL DP Q +
Sbjct: 721 LVVTEKSKESTIPEESPNPDHPQVPTITLPLPGSSVDQLCVDILHSEKPMKLFVDPSQGL 780
Query: 2302 EVTGHYGKEKARFSWIEVTFKHPPLQVLAS 2391
EVTG Y E FSW+EVT + P LQV A+
Sbjct: 781 EVTGKY--ENTGFSWLEVTIQKPHLQVHAT 808
>ref|NP_061216.2| inter alpha-trypsin inhibitor, heavy chain 4 isoform 1 [Mus
musculus].
Length = 942
Score = 927 bits (2396), Expect = 0.0
Identities = 504/811 (62%), Positives = 604/811 (74%), Gaps = 33/811 (4%)
Frame = +1
Query: 58 MKTLSPTGAYGXXXXXXXXXXXXQSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNK 237
MK+ +P + +TTA KN I+IYSLTVDS+VSSRFAHTVVTSRVVN+
Sbjct: 1 MKSPAPAHMWNLVLFLPSLLAVLPTTTAEKNGIDIYSLTVDSRVSSRFAHTVVTSRVVNR 60
Query: 238 GSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRA 417
AVQEATFQ+ELP+KAFITNFSMIIDGVTYPG + RGESAG+V+
Sbjct: 61 ADAVQEATFQVELPRKAFITNFSMIIDGVTYPGVVKEKAEAQKQYSAAVGRGESAGIVKT 120
Query: 418 TGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFE 597
TGR+TE+F+V+V+VAP +K+TFEL+Y+ELL R LG+YELLLK++PQQLVKHLQMDI+IFE
Sbjct: 121 TGRQTEKFEVSVNVAPGSKITFELIYQELLQRRLGMYELLLKVRPQQLVKHLQMDIYIFE 180
Query: 598 PQGISFLETESTFMTNELAEALTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVR 777
PQGIS LETESTFMT ELA ALT SQNKTKAHIRFKPTLSQQQKS +Q+TVL+G+FIVR
Sbjct: 181 PQGISILETESTFMTPELANALTTSQNKTKAHIRFKPTLSQQQKSQSEQDTVLNGDFIVR 240
Query: 778 YDVNRTVTGGSIQIENGYFVHYFAPEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKI 957
YDVNR+ +GGSIQIE GYFVH+FAPE L + KNVIFVID SGSM G+KIQQTREAL+KI
Sbjct: 241 YDVNRSDSGGSIQIEEGYFVHHFAPENLPTMSKNVIFVIDKSGSMSGKKIQQTREALVKI 300
Query: 958 LGDLGSRDQFNLVSFSGEATQWKKGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAV 1137
L DL +DQFNL+ FSGEA QWK+ L+ A+ EN+ +A +YA++I A GGTNIN+A+L+AV
Sbjct: 301 LKDLSPQDQFNLIEFSGEANQWKQSLVQATEENLNKAVNYASRIRAHGGTNINNAVLLAV 360
Query: 1138 QLLERANREELLPARSVTLIILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFD 1317
+LL+R+N+ ELLP++SV+LIILLTDGDPTVGETNP+ IQ NVREAI+GQ+SLFCLGFGFD
Sbjct: 361 ELLDRSNQAELLPSKSVSLIILLTDGDPTVGETNPTIIQNNVREAINGQYSLFCLGFGFD 420
Query: 1318 VSYAFLEKMALENGGLARRIYEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQD 1497
V+Y FLEKMAL+NGGLARRIYEDSDSALQL+DFY EVANPLL VAFEYPS+AVE VT+
Sbjct: 421 VNYPFLEKMALDNGGLARRIYEDSDSALQLQDFYHEVANPLLSSVAFEYPSDAVEEVTRY 480
Query: 1498 NFRLFFKGSELVVAGKLRDQSPDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIF 1677
F+ FKGSE+VVAGKL+DQ PDVL AKV GQ+HM+N+TF E+ VA+QE EF SPKYIF
Sbjct: 481 KFQHHFKGSEMVVAGKLQDQGPDVLLAKVSGQMHMQNITFQTEASVAQQEKEFKSPKYIF 540
Query: 1678 HSFMERLWAYLTIQQLLAQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQE 1857
H+FMERLWA LTIQQ L Q +SAS AE +ALEA+ L+LSL Y+FVTPLT MV+TKPEGQE
Sbjct: 541 HNFMERLWALLTIQQQLEQRISASGAELEALEAQVLNLSLKYNFVTPLTHMVVTKPEGQE 600
Query: 1858 QSQVAEKPVENGNRQGNTHSGHYSFQFHSV--GDRTSRLTGGSSV------DPVFSHRR- 2010
Q QVAEKPVE G+ + F G + + GS D V + R+
Sbjct: 601 QFQVAEKPVEVGDGMQRLPLAAQAHPFRPPVRGSKLMTVLKGSRSQIPRLGDAVRASRQY 660
Query: 2011 ---GWKG-QGPPG---PLQPTRFSHP-------FSRITLDRVLPEVLSVPD-ETSHDMDS 2145
G+ G GPPG P P F P S +L +LS+P + D
Sbjct: 661 IPPGFPGPPGPPGFPAPPGPPGFPAPPGPPLASGSDFSLQPSYERMLSLPSVAAQYPADP 720
Query: 2146 RII------GATIP---PPPARIQAPSVILPLPGQSVDQLCVDLKHSQGPMKLLSDPGQR 2298
++ +TIP P P Q P++ LPLPG SVDQLCVD+ HS+ PMKL DP Q
Sbjct: 721 HLVVTEKSKESTIPEESPNPDHPQVPTITLPLPGSSVDQLCVDILHSEKPMKLFVDPSQG 780
Query: 2299 VEVTGHYGKEKARFSWIEVTFKHPPLQVLAS 2391
+EVTG Y E FSW+EVT + P LQV A+
Sbjct: 781 LEVTGKY--ENTGFSWLEVTIQKPHLQVHAT 809
>ref|NP_032433.2| inter-alpha-trypsin inhibitor heavy chain H3 precursor [Mus
musculus].
Length = 889
Score = 601 bits (1549), Expect = e-172
Identities = 305/590 (51%), Positives = 417/590 (70%), Gaps = 2/590 (0%)
Frame = +1
Query: 154 INIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYP 333
I +YS + KV+SRFAH VVT+R VN+ +E +F +ELPK AFITNF++ IDGVTYP
Sbjct: 43 IEVYSTKISCKVTSRFAHNVVTTRAVNRADTAKEVSFDVELPKTAFITNFTLTIDGVTYP 102
Query: 334 GNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLAR 513
GN+ +G++AGLV+A+GRK E+F V+V+VA +KVTFEL YEELL R
Sbjct: 103 GNVKEKEVAQKQYEKAVSQGKTAGLVKASGRKLEKFTVSVNVAAGSKVTFELTYEELLKR 162
Query: 514 HLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNEL-AEALTISQNKTKA 690
+ G YE+ LK+QP+QLV+H ++D HIFEPQGIS L+ E++F+TN+L ALT S + K
Sbjct: 163 NKGKYEMYLKVQPKQLVRHFEIDAHIFEPQGISMLDAEASFITNDLLGSALTKSFSGKKG 222
Query: 691 HIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLSAI 870
H+ FKP+L QQ+ P +++L+G+F + YDVNR + G++QI NGYFVH+FAP+GL +
Sbjct: 223 HVSFKPSLDQQRSCPTCTDSLLNGDFTIVYDVNRE-SPGNVQIVNGYFVHFFAPQGLPVV 281
Query: 871 PKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPASA 1050
PKN++FVID SGSM GRKIQQTREAL+KIL D+ D N + FS + T WK L+ A+
Sbjct: 282 PKNIVFVIDVSGSMSGRKIQQTREALLKILDDVKEDDYLNFILFSTDVTTWKDHLVQATP 341
Query: 1051 ENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVG 1230
N++EAK++ IH Q TNIND +L +++L +A + +P RS ++II+LTDGD G
Sbjct: 342 ANLKEAKTFVKNIHDQSMTNINDGLLKGIEMLNKAREDHTVPERSTSIIIMLTDGDANTG 401
Query: 1231 ETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQLE 1410
E+ P KIQ+NVR AI G+ L+ LGFG +++Y FLE +ALEN GLARRIYEDSD+ LQL+
Sbjct: 402 ESRPEKIQENVRNAIGGKFPLYNLGFGNNLNYNFLETLALENHGLARRIYEDSDANLQLQ 461
Query: 1411 DFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKVRG 1590
FY+EVANPLL V EYP NA+ +T++++ F+ GSE+VVAG+L D++ D A V+G
Sbjct: 462 GFYEEVANPLLTNVEVEYPENAILDLTRNSYPHFYDGSEIVVAGRLVDRNMDNFKADVKG 521
Query: 1591 QLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSASDAEKKAL 1770
+ ++TF E + E +A YIF ++ERLWAYLTI+QLL + +A EK+ +
Sbjct: 522 HGALNDLTFTEEVDMEEMDAALKEQGYIFGDYIERLWAYLTIEQLLEKRKNAKGDEKENI 581
Query: 1771 EARALSLSLNYSFVTPLTSMVITKPE-GQEQSQVAEKPVENGNRQGNTHS 1917
A AL LSL Y FVTPLTSMV+TKPE ++Q+ +A+KP E + T S
Sbjct: 582 TAEALDLSLKYHFVTPLTSMVVTKPEDNEDQTSIADKPGEEAIAETTTMS 631
>ref|NP_032432.2| inter-alpha-trypsin inhibitor heavy chain H1 precursor [Mus
musculus].
Length = 907
Score = 471 bits (1211), Expect = e-132
Identities = 252/587 (42%), Positives = 377/587 (64%), Gaps = 6/587 (1%)
Frame = +1
Query: 148 NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVT 327
N ++I SL V+ KV+SRFAH V+TS+VVN +E F +E+PK AFI++F++ DG
Sbjct: 46 NGVSIKSLKVNCKVTSRFAHYVITSQVVNNADKAREVAFDVEIPKTAFISDFAITSDGKA 105
Query: 328 YPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELL 507
+ G+I GESAGLVRA+GR EQF + ++V +K TF L YEE+L
Sbjct: 106 FIGDIKDKVTAWKQYRKAAVLGESAGLVRASGRNMEQFTIHITVGAQSKATFRLTYEEVL 165
Query: 508 ARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELA-EALTISQNKT 684
R L Y++ +K++P+QLV+H ++D+ IFEPQGIS L+ +++F++ ELA + + S +
Sbjct: 166 KRRLMQYDITIKVRPKQLVQHFEIDVDIFEPQGISKLDAQASFLSEELAAQTIKKSFSGK 225
Query: 685 KAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLS 864
K H+ F+PT+SQQQ P ++L+G F V YDVNR + + N YF H+FAP+ L+
Sbjct: 226 KGHVLFRPTVSQQQSCPTCSTSLLNGEFKVTYDVNRDKLC-DLLVANNYFTHFFAPKNLT 284
Query: 865 AIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPA 1044
+ KN++FVID SGSM G+K++QT+EAL+KIL D+ D F+LV F + WK L+PA
Sbjct: 285 NMSKNLVFVIDISGSMEGQKVRQTKEALLKILEDMRPVDNFDLVLFGSKVQSWKGSLVPA 344
Query: 1045 SAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPT 1224
S N++ A+ + + G TN+N +L +++L +A + +++I+LTDG+PT
Sbjct: 345 SNANLQAAQDFVRRFSLAGATNLNGGLLRGIEILNKAQGSHPELSSPASILIMLTDGEPT 404
Query: 1225 VGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQ 1404
GET+ S+I KNVR AI G+ L+ LGFG D+ ++FLE M+ EN G A+RIYED D+ Q
Sbjct: 405 EGETDRSQILKNVRNAIRGRFPLYNLGFGHDLDFSFLEVMSTENNGWAQRIYEDHDATQQ 464
Query: 1405 LEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKV 1584
L+ FY +VANPLL V +YP +AV A+TQ + ++ GSE+VVAG++ + + A V
Sbjct: 465 LQGFYNQVANPLLTDVELQYPQDAVLALTQHRHKQYYDGSEIVVAGRIANHKLNTFKADV 524
Query: 1585 RGQLHMENVTFVMESRVAEQEAEFLSPK--YIFHSFMERLWAYLTIQQLLAQTVSASDAE 1758
R + E F V E+E + L + ++ + +ERLWAYLTIQ+LLA+ + E
Sbjct: 525 RAR--GEKQEFRATCLVDEEEMKKLLRERGHVLENHVERLWAYLTIQELLAKRMKTEGEE 582
Query: 1759 KKALEARALSLSLNYSFVTPLTSMVI---TKPEGQEQSQVAEKPVEN 1890
+ L ++ L +SL+Y FVTPLTS+ I T +G E + +KP+E+
Sbjct: 583 RANLSSQVLKMSLDYHFVTPLTSLTIRGLTDEDGLEPT--IDKPLED 627
>ref|NP_034712.2| inter-alpha-trypsin inhibitor heavy chain H2 [Mus musculus].
Length = 950
Score = 456 bits (1174), Expect = e-128
Identities = 250/591 (42%), Positives = 362/591 (61%), Gaps = 2/591 (0%)
Frame = +1
Query: 154 INIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYP 333
+ +YS V S ++SR A T + S++VN Q F +++PK AFI+NF+M ++G+T+
Sbjct: 74 VTLYSYKVQSTITSRVATTTIQSKLVNNSPLPQSVVFDVQIPKGAFISNFTMTVNGMTFT 133
Query: 334 GNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLAR 513
+I +G++AG VR+ E F V++ P AKV FEL Y+E+ R
Sbjct: 134 SSIKEKTVGRALYSQARAKGKTAGWVRSRTLDMENFNTEVNIPPGAKVQFELHYQEVKWR 193
Query: 514 HLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALTISQNKTKAH 693
LG YE + +QP +L KHL++++ I EPQG+ FL TF IS+ + KAH
Sbjct: 194 KLGSYEHKIHLQPGKLAKHLEVNVWIIEPQGMRFLHVPDTF-EGHFQGVPVISKGQQKAH 252
Query: 694 IRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLSAIP 873
+ FKPT++QQ+K P ET ++G +V YDVNR G +++ NGYFVH+FAPE L IP
Sbjct: 253 VSFKPTVAQQRKCPNCTETAVNGELVVMYDVNREEKAGELEVFNGYFVHFFAPENLDPIP 312
Query: 874 KNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPASAE 1053
KN++FVID SGSM G K++QT EA+ IL DL + DQF++V F+ W+ L+ A+
Sbjct: 313 KNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRTDDQFSVVDFNHNVRTWRNDLVSATKT 372
Query: 1054 NVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVGE 1233
+ +AK Y KI GGTNIN+A+L A+ +L A+ LL SV+LIIL++DGDPTVGE
Sbjct: 373 QIADAKRYIEKIQPSGGTNINEALLRAIFILNEASNMGLLNPDSVSLIILVSDGDPTVGE 432
Query: 1234 TNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQLED 1413
SKIQKNV+++I SLF LG GFDV Y FL++++ EN G+A+RIY + D++ QL+
Sbjct: 433 LKLSKIQKNVKQSIQDNISLFSLGIGFDVDYDFLKRLSNENRGIAQRIYGNQDTSSQLKK 492
Query: 1414 FYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKVRGQ 1593
FY +V+ PLLR V F YP +V VTQ+NF +F GSE+VVAGK + + +
Sbjct: 493 FYNQVSTPLLRNVQFNYPQASVTDVTQNNFHNYFGGSEIVVAGKFDPSKLTEVQSIITAT 552
Query: 1594 LHMENVTFVMESRVAEQEAEFLS-PKYIFHSFMERLWAYLTIQQLLAQ-TVSASDAEKKA 1767
+ S++ + E EFLS K+ F ++LWAYLTI QLLA+ +++ + A K+
Sbjct: 553 SANTELVLETLSQMDDLE-EFLSKDKHADPDFTKKLWAYLTINQLLAERSLAPTAAIKRK 611
Query: 1768 LEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNRQGNTHSG 1920
+ L +SL++ VTPLT+MVI G E+ P ++ G + G
Sbjct: 612 ITKTILQMSLDHHIVTPLTAMVIENDAGDERMLADSPPQDHSCCSGALYYG 662
>ref|NP_766059.1| inter-alpha-trypsin inhibitor heavy chain H5 precursor [Mus
musculus].
Length = 952
Score = 390 bits (1001), Expect = e-108
Identities = 236/583 (40%), Positives = 331/583 (56%), Gaps = 25/583 (4%)
Frame = +1
Query: 172 TVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXX 351
+V S + SR+A T V+ R++N+ S QEA FQM++P+ AFITNF+M+I Y G I
Sbjct: 55 SVKSTIISRYAFTTVSCRMLNRASEDQEAEFQMQIPESAFITNFTMLIGDSVYRGEITQK 114
Query: 352 XXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGVYE 531
R ++ G ++ F+ ++ + K F L YEELL R LG YE
Sbjct: 115 DKKSSESVKDK-RNRTSDDNEENG--SDMFKASLVIPSKDKAAFFLSYEELLQRRLGKYE 171
Query: 532 LLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAE-----------ALTISQN 678
+ ++PQQLV L +++ I E GI+ LE + + + I+QN
Sbjct: 172 HSISVRPQQLVGRLTVEVDILERSGITSLEVLPLHNSRKKGSGKAEGDVGPPPSTLINQN 231
Query: 679 KTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEG 858
+T A + FKPT+ QQ K Q +L G+FIVRYDV R G IQ+ NGYFVHYFAP+
Sbjct: 232 ETFAKVIFKPTVVQQAKIA--QNGIL-GDFIVRYDVEREQNIGDIQVLNGYFVHYFAPKN 288
Query: 859 LSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLL 1038
L +PKNV+FV+D S SM G K+QQTREAL+ IL DL +D+FN++ FS WK LL
Sbjct: 289 LPPLPKNVVFVLDISASMVGAKLQQTREALVTILNDLRPQDRFNIIGFSNRIKMWKDHLL 348
Query: 1039 PASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGD 1218
P + +N+ K Y + GGT+IN A+ A++LL + + RSV+LII LTDG
Sbjct: 349 PVTPDNIRNGKIYMYHLSPTGGTDINGALQAAIKLLNNYVAQNDIEDRSVSLIIFLTDGK 408
Query: 1219 PTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSA 1398
PT GETN KI N +EA GQ +F +G G DV + LEK++LEN GL RR++E+ +
Sbjct: 409 PTFGETNTLKILSNTKEATRGQICIFTVGIGDDVDFKLLEKLSLENCGLTRRVHEEDKAG 468
Query: 1399 LQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSA 1578
QL FY E+ PLL + +YP + VE T+ F +F GSE+V+AGK+ D+ D L
Sbjct: 469 AQLIGFYDEIRTPLLSDIRIDYPPDVVEHATKTLFPNYFNGSEIVIAGKMVDKKFDQLHV 528
Query: 1579 KVRGQLHMENVTFVMESRVAEQEAEFL-------------SPKYIFHSFMERLWAYLTIQ 1719
+V + FV+ R E + K + H +ERLW+YLT++
Sbjct: 529 EVTAS---NSKKFVILKRDIPVEFRKMGNDVSVTPGSARDGGKDLNH--IERLWSYLTVK 583
Query: 1720 QLLAQ-TVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKP 1845
+LL+ S S+ EK+ L +A L+LNY F+TP TSM + KP
Sbjct: 584 ELLSSWRQSNSEQEKEQLRQKAQDLALNYHFLTPFTSMKLRKP 626
>ref|XP_003085348.1| PREDICTED: LOW QUALITY PROTEIN: inter-alpha (globulin) inhibitor
H5-like, pseudogene [Mus musculus].
Length = 1321
Score = 382 bits (981), Expect = e-106
Identities = 229/591 (38%), Positives = 340/591 (57%), Gaps = 21/591 (3%)
Frame = +1
Query: 166 SLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIX 345
S ++ S V SR+A+T+VTS + N EA F + LP+ AFI+NF+M ID Y I
Sbjct: 39 SYSIRSTVVSRYANTLVTSVLFNPHDEAHEAIFDLNLPRIAFISNFTMTIDDKIYVAEIK 98
Query: 346 XXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGV 525
+G++A V R++E F+++ +A K TF L YEELL RH G
Sbjct: 99 EKHQAKKMYEKAYQQGKTAAHVGIRDRESENFRISTMLAAGTKATFALAYEELLQRHQGR 158
Query: 526 YELLLKIQPQQLVKHLQMDIHIFEPQGISF-----LETESTFMTNELAE-----ALTISQ 675
Y+L++ ++P QLV+ L ++I + E GI++ L T N+ +E + I +
Sbjct: 159 YQLVVGLRPGQLVRKLNVEITVSERTGIAYVHIPPLRTSQVCTNNQTSEGDLPPSTRIQR 218
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
+T HI F PTL Q + + +F + YDV+ G +Q+ GYF+HYFAP
Sbjct: 219 GETCVHITFSPTLRDQSAF---SSSGIMADFTIHYDVSMEDIIGDVQVYGGYFIHYFAPR 275
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWK-KG 1032
GL + KNV+FVID SGSM G K+QQT++A+ IL DL + D FN+++FS WK +G
Sbjct: 276 GLQPLEKNVVFVIDVSGSMFGTKLQQTKKAMDTILSDLQASDSFNIITFSDTVNIWKAEG 335
Query: 1033 LLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARS-----VTLI 1197
+ A+ +N+ AK+Y +++ A G T+IN A+L A +L +N+E P + + LI
Sbjct: 336 SIQATVQNIHSAKNYVSRMEADGWTDINAALLAAASVLNHSNQE---PGKGRGVGQIPLI 392
Query: 1198 ILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRI 1377
+ LTDG+PT GET PS I N+R+A+ + SLF L FG D ++ L +++LEN G ARRI
Sbjct: 393 MFLTDGEPTAGETTPSVILSNIRQALAHRVSLFSLAFGDDADFSLLRRLSLENQGEARRI 452
Query: 1378 YEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQ 1557
YED+D+ALQLE Y E++ PLL V +Y V A ++ +F +F GSELVVAGK++
Sbjct: 453 YEDADAALQLEGLYAEISRPLLADVHLDYLGGWVGASSRAHFPNYFHGSELVVAGKVQPG 512
Query: 1558 SPDV-LSAKVRG-QLHMENVTFVMESRVAEQEAEFL--SPKYIFHSFMERLWAYLTIQQL 1725
++ + RG H+ E+ + Q+A P F+ RLWAY+TI +L
Sbjct: 513 EQELGIHLAARGPNGHLLVAHHSEEASNSSQKAFGCPGKPALNVTHFIHRLWAYVTIGEL 572
Query: 1726 LAQTVSASD-AEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAE 1875
L A D ++ L A+AL+LSL Y+FVTPLTS+V+ E + + +
Sbjct: 573 LKARFQAKDTTTRRLLAAKALNLSLEYNFVTPLTSLVVVHLEKTNEEAMTQ 623
>ref|XP_003086909.1| PREDICTED: LOW QUALITY PROTEIN: inter-alpha (globulin) inhibitor
H5-like, pseudogene [Mus musculus].
Length = 1321
Score = 382 bits (981), Expect = e-106
Identities = 229/591 (38%), Positives = 340/591 (57%), Gaps = 21/591 (3%)
Frame = +1
Query: 166 SLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIX 345
S ++ S V SR+A+T+VTS + N EA F + LP+ AFI+NF+M ID Y I
Sbjct: 39 SYSIRSTVVSRYANTLVTSVLFNPHDEAHEAIFDLNLPRIAFISNFTMTIDDKIYVAEIK 98
Query: 346 XXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGV 525
+G++A V R++E F+++ +A K TF L YEELL RH G
Sbjct: 99 EKHQAKKMYEKAYQQGKTAAHVGIRDRESENFRISTMLAAGTKATFALAYEELLQRHQGR 158
Query: 526 YELLLKIQPQQLVKHLQMDIHIFEPQGISF-----LETESTFMTNELAE-----ALTISQ 675
Y+L++ ++P QLV+ L ++I + E GI++ L T N+ +E + I +
Sbjct: 159 YQLVVGLRPGQLVRKLNVEITVSERTGIAYVHIPPLRTSQVCTNNQTSEGDLPPSTRIQR 218
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
+T HI F PTL Q + + +F + YDV+ G +Q+ GYF+HYFAP
Sbjct: 219 GETCVHITFSPTLRDQSAF---SSSGIMADFTIHYDVSMEDIIGDVQVYGGYFIHYFAPR 275
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWK-KG 1032
GL + KNV+FVID SGSM G K+QQT++A+ IL DL + D FN+++FS WK +G
Sbjct: 276 GLQPLEKNVVFVIDVSGSMFGTKLQQTKKAMDTILSDLQASDSFNIITFSDTVNIWKAEG 335
Query: 1033 LLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARS-----VTLI 1197
+ A+ +N+ AK+Y +++ A G T+IN A+L A +L +N+E P + + LI
Sbjct: 336 SIQATVQNIHSAKNYVSRMEADGWTDINAALLAAASVLNHSNQE---PGKGRGVGQIPLI 392
Query: 1198 ILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRI 1377
+ LTDG+PT GET PS I N+R+A+ + SLF L FG D ++ L +++LEN G ARRI
Sbjct: 393 MFLTDGEPTAGETTPSVILSNIRQALAHRVSLFSLAFGDDADFSLLRRLSLENQGEARRI 452
Query: 1378 YEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQ 1557
YED+D+ALQLE Y E++ PLL V +Y V A ++ +F +F GSELVVAGK++
Sbjct: 453 YEDADAALQLEGLYAEISRPLLADVHLDYLGGWVGASSRAHFPNYFHGSELVVAGKVQPG 512
Query: 1558 SPDV-LSAKVRG-QLHMENVTFVMESRVAEQEAEFL--SPKYIFHSFMERLWAYLTIQQL 1725
++ + RG H+ E+ + Q+A P F+ RLWAY+TI +L
Sbjct: 513 EQELGIHLAARGPNGHLLVAHHSEEASNSSQKAFGCPGKPALNVTHFIHRLWAYVTIGEL 572
Query: 1726 LAQTVSASD-AEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAE 1875
L A D ++ L A+AL+LSL Y+FVTPLTS+V+ E + + +
Sbjct: 573 LKARFQAKDTTTRRLLAAKALNLSLEYNFVTPLTSLVVVHLEKTNEEAMTQ 623
>ref|XP_003084486.1| PREDICTED: LOW QUALITY PROTEIN: von Willebrand factor A
domain-containing protein 3B [Mus musculus].
Length = 1223
Score = 54.3 bits (129), Expect = 4e-07
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Frame = +1
Query: 880 VIFVIDTSGSMRGRKIQQTREALIKILGD-LGSRDQFNLVSFSGEATQWKKGLLPASAEN 1056
+ +IDTS SM+ R + ++ +I+ + + L + +FN V+F G+A W++ L + +N
Sbjct: 483 IYVLIDTSCSMKSR-LNLVKDKIIQFIQEQLRYKSKFNFVTFDGQAIAWREKLAEVNEDN 541
Query: 1057 VEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVGET 1236
+++A+S+ I TN +A+ +A A+ E +I LLTDG P +
Sbjct: 542 LKQAQSWIRGIKVGSSTNTLNALKIAF-----ADEE-------TQVIYLLTDGRP---DQ 586
Query: 1237 NPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGG 1362
P + +V+ + + +V+ FL+++A GG
Sbjct: 587 PPEMVMDHVKLFQNIPICAISFSYNDEVANEFLKELAALTGG 628
>ref|XP_003086202.1| PREDICTED: LOW QUALITY PROTEIN: von Willebrand factor A
domain-containing protein 3B [Mus musculus].
Length = 1169
Score = 54.3 bits (129), Expect = 4e-07
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Frame = +1
Query: 880 VIFVIDTSGSMRGRKIQQTREALIKILGD-LGSRDQFNLVSFSGEATQWKKGLLPASAEN 1056
+ +IDTS SM+ R + ++ +I+ + + L + +FN V+F G+A W++ L + +N
Sbjct: 483 IYVLIDTSCSMKSR-LNLVKDKIIQFIQEQLRYKSKFNFVTFDGQAIAWREKLAEVNEDN 541
Query: 1057 VEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTVGET 1236
+++A+S+ I TN +A+ +A A+ E +I LLTDG P +
Sbjct: 542 LKQAQSWIRGIKVGSSTNTLNALKIAF-----ADEE-------TQVIYLLTDGRP---DQ 586
Query: 1237 NPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGG 1362
P + +V+ + + +V+ FL+++A GG
Sbjct: 587 PPEMVMDHVKLFQNIPICAISFSYNDEVANEFLKELAALTGG 628
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.317 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 80,898,079
Number of extensions: 2305390
Number of successful extensions: 8850
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 8786
Number of HSP's successfully gapped: 12
Length of query: 797
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 688
Effective length of database: 12,343,635
Effective search space: 8492420880
Effective search space used: 8492420880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007767
(2392 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002209.2| inter-alpha-trypsin inhibitor heavy chain H4 is... 1019 0.0
Alignment gi|NP_001159921.1| inter-alpha-trypsin inhibitor heavy chain H4... 1008 0.0
Alignment gi|NP_002208.3| inter-alpha-trypsin inhibitor heavy chain H3 pr... 602 e-172
Alignment gi|NP_002207.2| inter-alpha-trypsin inhibitor heavy chain H2 [H... 465 e-131
Alignment gi|NP_002206.2| inter-alpha-trypsin inhibitor heavy chain H1 is... 464 e-130
Alignment gi|NP_001159906.1| inter-alpha-trypsin inhibitor heavy chain H1... 392 e-108
Alignment gi|NP_085046.5| inter-alpha-trypsin inhibitor heavy chain H5 is... 377 e-104
Alignment gi|NP_001001851.1| inter-alpha-trypsin inhibitor heavy chain H5... 377 e-104
Alignment gi|NP_940912.1| inter-alpha-trypsin inhibitor heavy chain H5-li... 367 e-101
Alignment gi|NP_116206.4| inter-alpha-trypsin inhibitor heavy chain H5 is... 300 3e-81
>ref|NP_002209.2| inter-alpha-trypsin inhibitor heavy chain H4 isoform 1 precursor
[Homo sapiens].
Length = 930
Score = 1019 bits (2636), Expect = 0.0
Identities = 543/780 (69%), Positives = 618/780 (79%), Gaps = 25/780 (3%)
Frame = +1
Query: 127 QSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFS 306
Q+TTA KN I+IYSLTVDS+VSSRFAHTVVTSRVVN+ + VQEATFQMELPKKAFITNFS
Sbjct: 24 QTTTAEKNGIDIYSLTVDSRVSSRFAHTVVTSRVVNRANTVQEATFQMELPKKAFITNFS 83
Query: 307 MIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFE 486
MIIDG+TYPG I +G+SAGLV+ATGR EQFQV+VSVAP AK+TFE
Sbjct: 84 MIIDGMTYPGIIKEKAEAQAQYSAAVAKGKSAGLVKATGRNMEQFQVSVSVAPNAKITFE 143
Query: 487 LVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALT 666
LVYEELL R LGVYELLLK++PQQLVKHLQMDIHIFEPQGISFLETESTFMTN+L +ALT
Sbjct: 144 LVYEELLKRRLGVYELLLKVRPQQLVKHLQMDIHIFEPQGISFLETESTFMTNQLVDALT 203
Query: 667 ISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYF 846
QNKTKAHIRFKPTLSQQQKSPEQQETVLDGN I+RYDV+R ++GGSIQIENGYFVHYF
Sbjct: 204 TWQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNLIIRYDVDRAISGGSIQIENGYFVHYF 263
Query: 847 APEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWK 1026
APEGL+ +PKNV+FVID SGSM GRKIQQTREALIKIL DL RDQFNL+ FS EATQW+
Sbjct: 264 APEGLTTMPKNVVFVIDKSGSMSGRKIQQTREALIKILDDLSPRDQFNLIVFSTEATQWR 323
Query: 1027 KGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILL 1206
L+PASAENV +A+S+AA I A GGTNINDAMLMAVQLL+ +N+EE LP SV+LIILL
Sbjct: 324 PSLVPASAENVNKARSFAAGIQALGGTNINDAMLMAVQLLDSSNQEERLPEGSVSLIILL 383
Query: 1207 TDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYED 1386
TDGDPTVGETNP IQ NVREA+ G++SLFCLGFGFDVSYAFLEK+AL+NGGLARRI+ED
Sbjct: 384 TDGDPTVGETNPRSIQNNVREAVSGRYSLFCLGFGFDVSYAFLEKLALDNGGLARRIHED 443
Query: 1387 SDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPD 1566
SDSALQL+DFYQEVANPLL V FEYPSNAVE VTQ+NFRL FKGSE+VVAGKL+D+ PD
Sbjct: 444 SDSALQLQDFYQEVANPLLTAVTFEYPSNAVEEVTQNNFRLLFKGSEMVVAGKLQDRGPD 503
Query: 1567 VLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSA 1746
VL+A V G+L +N+TF ES VAEQEAEF SPKYIFH+FMERLWAYLTIQQLL QTVSA
Sbjct: 504 VLTATVSGKLPTQNITFQTESSVAEQEAEFQSPKYIFHNFMERLWAYLTIQQLLEQTVSA 563
Query: 1747 SDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNRQGNTHSGHY 1926
SDA+++AL +AL+LSL YSFVTPLTSMV+TKP+ QEQSQVAEKP+E +R N HSG
Sbjct: 564 SDADQQALRNQALNLSLAYSFVTPLTSMVVTKPDDQEQSQVAEKPMEGESRNRNVHSGST 623
Query: 1927 SFQFHSVGDRTSRLTGGSSVDPVFSHRRGWKGQ--------------------GPPGP-- 2040
F+++ G + + + FS RRGW Q G PGP
Sbjct: 624 FFKYYLQGAKIPK------PEASFSPRRGWNRQAGAAGSRMNFRPGVLSSRQLGLPGPPD 677
Query: 2041 LQPTRFSHPFSRIT-LDRVLPEVLSVPD-ETSHDMDSRIIGATI-PPPPARIQAPSVILP 2211
+ HPF R+ L P S PD S M+ +I T+ PA IQAPS ILP
Sbjct: 678 VPDHAAYHPFRRLAILPASAPPATSNPDPAVSRVMNMKIEETTMTTQTPAPIQAPSAILP 737
Query: 2212 LPGQSVDQLCVDLKHSQGPMKLLSDPGQRVEVTGHYGKEKARFSWIEVTFKHPPLQVLAS 2391
LPGQSV++LCVD +H QGP+ LLSDP Q VEVTG Y +EKA FSWIEVTFK+P + V AS
Sbjct: 738 LPGQSVERLCVDPRHRQGPVNLLSDPEQGVEVTGQYEREKAGFSWIEVTFKNPLVWVHAS 797
>ref|NP_001159921.1| inter-alpha-trypsin inhibitor heavy chain H4 isoform 2 precursor
[Homo sapiens].
Length = 900
Score = 1008 bits (2606), Expect = 0.0
Identities = 539/760 (70%), Positives = 611/760 (80%), Gaps = 5/760 (0%)
Frame = +1
Query: 127 QSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFS 306
Q+TTA KN I+IYSLTVDS+VSSRFAHTVVTSRVVN+ + VQEATFQMELPKKAFITNFS
Sbjct: 24 QTTTAEKNGIDIYSLTVDSRVSSRFAHTVVTSRVVNRANTVQEATFQMELPKKAFITNFS 83
Query: 307 MIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFE 486
MIIDG+TYPG I +G+SAGLV+ATGR EQFQV+VSVAP AK+TFE
Sbjct: 84 MIIDGMTYPGIIKEKAEAQAQYSAAVAKGKSAGLVKATGRNMEQFQVSVSVAPNAKITFE 143
Query: 487 LVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALT 666
LVYEELL R LGVYELLLK++PQQLVKHLQMDIHIFEPQGISFLETESTFMTN+L +ALT
Sbjct: 144 LVYEELLKRRLGVYELLLKVRPQQLVKHLQMDIHIFEPQGISFLETESTFMTNQLVDALT 203
Query: 667 ISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYF 846
QNKTKAHIRFKPTLSQQQKSPEQQETVLDGN I+RYDV+R ++GGSIQIENGYFVHYF
Sbjct: 204 TWQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNLIIRYDVDRAISGGSIQIENGYFVHYF 263
Query: 847 APEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWK 1026
APEGL+ +PKNV+FVID SGSM GRKIQQTREALIKIL DL RDQFNL+ FS EATQW+
Sbjct: 264 APEGLTTMPKNVVFVIDKSGSMSGRKIQQTREALIKILDDLSPRDQFNLIVFSTEATQWR 323
Query: 1027 KGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILL 1206
L+PASAENV +A+S+AA I A GGTNINDAMLMAVQLL+ +N+EE LP SV+LIILL
Sbjct: 324 PSLVPASAENVNKARSFAAGIQALGGTNINDAMLMAVQLLDSSNQEERLPEGSVSLIILL 383
Query: 1207 TDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYED 1386
TDGDPTVGETNP IQ NVREA+ G++SLFCLGFGFDVSYAFLEK+AL+NGGLARRI+ED
Sbjct: 384 TDGDPTVGETNPRSIQNNVREAVSGRYSLFCLGFGFDVSYAFLEKLALDNGGLARRIHED 443
Query: 1387 SDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPD 1566
SDSALQL+DFYQEVANPLL V FEYPSNAVE VTQ+NFRL FKGSE+VVAGKL+D+ PD
Sbjct: 444 SDSALQLQDFYQEVANPLLTAVTFEYPSNAVEEVTQNNFRLLFKGSEMVVAGKLQDRGPD 503
Query: 1567 VLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSA 1746
VL+A V G+L +N+TF ES VAEQEAEF SPKYIFH+FMERLWAYLTIQQLL QTVSA
Sbjct: 504 VLTATVSGKLPTQNITFQTESSVAEQEAEFQSPKYIFHNFMERLWAYLTIQQLLEQTVSA 563
Query: 1747 SDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNRQGNTHSGHY 1926
SDA+++AL +AL+LSL YSFVTPLTSMV+TKP+ QEQSQVAEKP+E +R N HS
Sbjct: 564 SDADQQALRNQALNLSLAYSFVTPLTSMVVTKPDDQEQSQVAEKPMEGESRNRNVHSA-- 621
Query: 1927 SFQFHSVGDRTSRLTGGSSVDPVFSHRRGWKGQGPPGP--LQPTRFSHPFSRIT-LDRVL 2097
+ G R + G V S R+ G PGP + HPF R+ L
Sbjct: 622 ----GAAGSRMNFRPG------VLSSRQ----LGLPGPPDVPDHAAYHPFRRLAILPASA 667
Query: 2098 PEVLSVPD-ETSHDMDSRIIGATI-PPPPARIQAPSVILPLPGQSVDQLCVDLKHSQGPM 2271
P S PD S M+ +I T+ PA IQAPS ILPLPGQSV++LCVD +H QGP+
Sbjct: 668 PPATSNPDPAVSRVMNMKIEETTMTTQTPAPIQAPSAILPLPGQSVERLCVDPRHRQGPV 727
Query: 2272 KLLSDPGQRVEVTGHYGKEKARFSWIEVTFKHPPLQVLAS 2391
LLSDP Q VEVTG Y +EKA FSWIEVTFK+P + V AS
Sbjct: 728 NLLSDPEQGVEVTGQYEREKAGFSWIEVTFKNPLVWVHAS 767
>ref|NP_002208.3| inter-alpha-trypsin inhibitor heavy chain H3 preproprotein [Homo
sapiens].
Length = 890
Score = 602 bits (1551), Expect = e-172
Identities = 303/583 (51%), Positives = 415/583 (71%), Gaps = 2/583 (0%)
Frame = +1
Query: 148 NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVT 327
N I +YS ++SKV+SRFAH VVT R VN+ +E +F +ELPK AFITNF++ IDGVT
Sbjct: 41 NGIEVYSTKINSKVTSRFAHNVVTMRAVNRADTAKEVSFDVELPKTAFITNFTLTIDGVT 100
Query: 328 YPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELL 507
YPGN+ +G++AGLV+A+GRK E+F V+V+VA +KVTFEL YEELL
Sbjct: 101 YPGNVKEKEVAKKQYEKAVSQGKTAGLVKASGRKLEKFTVSVNVAAGSKVTFELTYEELL 160
Query: 508 ARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNEL-AEALTISQNKT 684
RH G YE+ LK+QP+QLVKH ++++ IFEPQGIS L+ E++F+TN+L ALT S +
Sbjct: 161 KRHKGKYEMYLKVQPKQLVKHFEIEVDIFEPQGISMLDAEASFITNDLLGSALTKSFSGK 220
Query: 685 KAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLS 864
K H+ FKP+L QQ+ P +++L+G+F + YDVNR + G++QI NGYFVH+FAP+GL
Sbjct: 221 KGHVSFKPSLDQQRSCPTCTDSLLNGDFTITYDVNRE-SPGNVQIVNGYFVHFFAPQGLP 279
Query: 865 AIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPA 1044
+PKNV FVID SGSM GRK++QT+EAL++IL D+ D N + FSG+ + WK+ L+ A
Sbjct: 280 VVPKNVAFVIDISGSMAGRKLEQTKEALLRILEDMQEEDYLNFILFSGDVSTWKEHLVQA 339
Query: 1045 SAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPT 1224
+ EN++EA+++ + +G TNIND +L + +L +A E +P RS +++I+LTDGD
Sbjct: 340 TPENLQEARTFVKSMEDKGMTNINDGLLRGISMLNKAREEHRIPERSTSIVIMLTDGDAN 399
Query: 1225 VGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQ 1404
VGE+ P KIQ+NVR AI G+ L+ LGFG +++Y FLE MALEN G ARRIYEDSD+ LQ
Sbjct: 400 VGESRPEKIQENVRNAIGGKFPLYNLGFGNNLNYNFLENMALENHGFARRIYEDSDADLQ 459
Query: 1405 LEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKV 1584
L+ FY+EVANPLL V EYP NA+ +TQ+ ++ F+ GSE+VVAG+L D+ + A V
Sbjct: 460 LQGFYEEVANPLLTGVEMEYPENAILDLTQNTYQHFYDGSEIVVAGRLVDEDMNSFKADV 519
Query: 1585 RGQLHMENVTFVMESRVAEQEAEFLSPKYIFHSFMERLWAYLTIQQLLAQTVSASDAEKK 1764
+G ++TF E + E E YIF +++ERLWAYLTI+QLL + +A EK+
Sbjct: 520 KGHGATNDLTFTEEVDMKEMEKALQERDYIFGNYIERLWAYLTIEQLLEKRKNAHGEEKE 579
Query: 1765 ALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQ-VAEKPVEN 1890
L ARAL LSL Y FVTPLTSMV+TKPE E + +A+KP E+
Sbjct: 580 NLTARALDLSLKYHFVTPLTSMVVTKPEDNEDERAIADKPGED 622
>ref|NP_002207.2| inter-alpha-trypsin inhibitor heavy chain H2 [Homo sapiens].
Length = 946
Score = 465 bits (1197), Expect = e-131
Identities = 254/584 (43%), Positives = 363/584 (62%), Gaps = 3/584 (0%)
Frame = +1
Query: 148 NDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVT 327
+ + +YS V S ++SR A T++ S+VVN Q F +++PK AFI+NFSM +DG T
Sbjct: 68 DQVTLYSYKVQSTITSRMATTMIQSKVVNNSPQPQNVVFDVQIPKGAFISNFSMTVDGKT 127
Query: 328 YPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELL 507
+ +I +G++AGLVR++ E F+ V+V P AKV FEL Y+E+
Sbjct: 128 FRSSIKEKTVGRALYAQARAKGKTAGLVRSSALDMENFRTEVNVLPGAKVQFELHYQEVK 187
Query: 508 ARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAEALTISQNKTK 687
R LG YE + +QP +L KHL++D+ + EPQG+ FL TF IS+ + K
Sbjct: 188 WRKLGSYEHRIYLQPGRLAKHLEVDVWVIEPQGLRFLHVPDTF-EGHFDGVPVISKGQQK 246
Query: 688 AHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPEGLSA 867
AH+ FKPT++QQ+ P +ET +DG +V YDV R G +++ NGYFVH+FAP+ L
Sbjct: 247 AHVSFKPTVAQQRICPNCRETAVDGELVVLYDVKREEKAGELEVFNGYFVHFFAPDNLDP 306
Query: 868 IPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGLLPAS 1047
IPKN++FVID SGSM G K++QT EA+ IL DL + D F+++ F+ W+ L+ A+
Sbjct: 307 IPKNILFVIDVSGSMWGVKMKQTVEAMKTILDDLRAEDHFSVIDFNQNIRTWRNDLISAT 366
Query: 1048 AENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDGDPTV 1227
V +AK Y KI GGTNIN+A+L A+ +L AN LL SV+LIIL++DGDPTV
Sbjct: 367 KTQVADAKRYIEKIQPSGGTNINEALLRAIFILNEANNLGLLDPNSVSLIILVSDGDPTV 426
Query: 1228 GETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDSALQL 1407
GE SKIQKNV+E I SLF LG GFDV Y FL++++ EN G+A+RIY + D++ QL
Sbjct: 427 GELKLSKIQKNVKENIQDNISLFSLGMGFDVDYDFLKRLSNENHGIAQRIYGNQDTSSQL 486
Query: 1408 EDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLSAKVR 1587
+ FY +V+ PLLR V F YP +V VTQ+NF +F GSE+VVAGK D + + +
Sbjct: 487 KKFYNQVSTPLLRNVQFNYPHTSVTDVTQNNFHNYFGGSEIVVAGKFDPAKLDQIESVIT 546
Query: 1588 GQLHMENVTFVMESRVAEQE-AEFLS-PKYIFHSFMERLWAYLTIQQLLAQ-TVSASDAE 1758
N V+E+ + +FLS K+ F +LWAYLTI QLLA+ +++ + A
Sbjct: 547 AT--SANTQLVLETLAQMDDLQDFLSKDKHADPDFTRKLWAYLTINQLLAERSLAPTAAA 604
Query: 1759 KKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVEN 1890
K+ + L +SL++ VTPLTS+VI G E+ +A+ P ++
Sbjct: 605 KRRITRSILQMSLDHHIVTPLTSLVIENEAGDER-MLADAPPQD 647
>ref|NP_002206.2| inter-alpha-trypsin inhibitor heavy chain H1 isoform a [Homo
sapiens].
Length = 911
Score = 464 bits (1193), Expect = e-130
Identities = 257/594 (43%), Positives = 381/594 (64%), Gaps = 6/594 (1%)
Frame = +1
Query: 127 QSTTAHKNDINIYSLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFS 306
Q+ + + I SL V+ KV+SRFAH VVTS+VVN + +E F +E+PK AFI++F+
Sbjct: 42 QAVDTAVDGVFIRSLKVNCKVTSRFAHYVVTSQVVNTANEAREVAFDLEIPKTAFISDFA 101
Query: 307 MIIDGVTYPGNIXXXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFE 486
+ DG + G+I GE+AGLVRA+GR EQF + ++V P +KVTF+
Sbjct: 102 VTADGNAFIGDIKDKVTAWKQYRKAAISGENAGLVRASGRTMEQFTIHLTVNPQSKVTFQ 161
Query: 487 LVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELA-EAL 663
L YEE+L R+ YE+++K++P+QLV H ++D+ IFEPQGIS L+ +++F+ ELA + +
Sbjct: 162 LTYEEVLKRNHMQYEIVIKVKPKQLVHHFEIDVDIFEPQGISKLDAQASFLPKELAAQTI 221
Query: 664 TISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHY 843
S + K H+ F+PT+SQQQ P ++L+G+F V YDV+R + + N +F H+
Sbjct: 222 KKSFSGKKGHVLFRPTVSQQQSCPTCSTSLLNGHFKVTYDVSRDKIC-DLLVANNHFAHF 280
Query: 844 FAPEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQW 1023
FAP+ L+ + KNV+FVID SGSMRG+K++QT+EAL+KILGD+ D F+LV F W
Sbjct: 281 FAPQNLTNMNKNVVFVIDISGSMRGQKVKQTKEALLKILGDMQPGDYFDLVLFGTRVQSW 340
Query: 1024 KKGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARS--VTLI 1197
K L+ AS N++ A+ + TN+N +L +++L + +E LP S +++
Sbjct: 341 KGSLVQASEANLQAAQDFVRGFSLDEATNLNGGLLRGIEILNQV--QESLPELSNHASIL 398
Query: 1198 ILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRI 1377
I+LTDGDPT G T+ S+I KNVR AI G+ L+ LGFG +V + FLE M++EN G A+RI
Sbjct: 399 IMLTDGDPTEGVTDRSQILKNVRNAIRGRFPLYNLGFGHNVDFNFLEVMSMENNGRAQRI 458
Query: 1378 YEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQ 1557
YED D+ QL+ FY +VA PLL V +YP +AV A+TQ++ + +++GSE+VVAG++ D
Sbjct: 459 YEDHDATQQLQGFYSQVAKPLLVDVDLQYPQDAVLALTQNHHKQYYEGSEIVVAGRIADN 518
Query: 1558 SPDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPK--YIFHSFMERLWAYLTIQQLLA 1731
A V Q H E F + V E+E + L + ++ + +ERLWAYLTIQ+LLA
Sbjct: 519 KQSSFKADV--QAHGEGQEFSITCLVDEEEMKKLLRERGHMLENHVERLWAYLTIQELLA 576
Query: 1732 QTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQE-QSQVAEKPVEN 1890
+ + E+ L ++AL +SL+Y FVTPLTSM I Q+ +KP E+
Sbjct: 577 KRMKVDREERANLSSQALQMSLDYGFVTPLTSMSIRGMADQDGLKPTIDKPSED 630
>ref|NP_001159906.1| inter-alpha-trypsin inhibitor heavy chain H1 isoform b [Homo
sapiens].
Length = 769
Score = 392 bits (1006), Expect = e-108
Identities = 215/492 (43%), Positives = 321/492 (65%), Gaps = 6/492 (1%)
Frame = +1
Query: 433 EQFQVAVSVAPAAKVTFELVYEELLARHLGVYELLLKIQPQQLVKHLQMDIHIFEPQGIS 612
EQF + ++V P +KVTF+L YEE+L R+ YE+++K++P+QLV H ++D+ IFEPQGIS
Sbjct: 2 EQFTIHLTVNPQSKVTFQLTYEEVLKRNHMQYEIVIKVKPKQLVHHFEIDVDIFEPQGIS 61
Query: 613 FLETESTFMTNELA-EALTISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVN 789
L+ +++F+ ELA + + S + K H+ F+PT+SQQQ P ++L+G+F V YDV+
Sbjct: 62 KLDAQASFLPKELAAQTIKKSFSGKKGHVLFRPTVSQQQSCPTCSTSLLNGHFKVTYDVS 121
Query: 790 RTVTGGSIQIENGYFVHYFAPEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDL 969
R + + N +F H+FAP+ L+ + KNV+FVID SGSMRG+K++QT+EAL+KILGD+
Sbjct: 122 RDKIC-DLLVANNHFAHFFAPQNLTNMNKNVVFVIDISGSMRGQKVKQTKEALLKILGDM 180
Query: 970 GSRDQFNLVSFSGEATQWKKGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLE 1149
D F+LV F WK L+ AS N++ A+ + TN+N +L +++L
Sbjct: 181 QPGDYFDLVLFGTRVQSWKGSLVQASEANLQAAQDFVRGFSLDEATNLNGGLLRGIEILN 240
Query: 1150 RANREELLPARS--VTLIILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVS 1323
+ +E LP S +++I+LTDGDPT G T+ S+I KNVR AI G+ L+ LGFG +V
Sbjct: 241 QV--QESLPELSNHASILIMLTDGDPTEGVTDRSQILKNVRNAIRGRFPLYNLGFGHNVD 298
Query: 1324 YAFLEKMALENGGLARRIYEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNF 1503
+ FLE M++EN G A+RIYED D+ QL+ FY +VA PLL V +YP +AV A+TQ++
Sbjct: 299 FNFLEVMSMENNGRAQRIYEDHDATQQLQGFYSQVAKPLLVDVDLQYPQDAVLALTQNHH 358
Query: 1504 RLFFKGSELVVAGKLRDQSPDVLSAKVRGQLHMENVTFVMESRVAEQEAEFLSPK--YIF 1677
+ +++GSE+VVAG++ D A V Q H E F + V E+E + L + ++
Sbjct: 359 KQYYEGSEIVVAGRIADNKQSSFKADV--QAHGEGQEFSITCLVDEEEMKKLLRERGHML 416
Query: 1678 HSFMERLWAYLTIQQLLAQTVSASDAEKKALEARALSLSLNYSFVTPLTSMVITKPEGQE 1857
+ +ERLWAYLTIQ+LLA+ + E+ L ++AL +SL+Y FVTPLTSM I Q+
Sbjct: 417 ENHVERLWAYLTIQELLAKRMKVDREERANLSSQALQMSLDYGFVTPLTSMSIRGMADQD 476
Query: 1858 -QSQVAEKPVEN 1890
+KP E+
Sbjct: 477 GLKPTIDKPSED 488
>ref|NP_085046.5| inter-alpha-trypsin inhibitor heavy chain H5 isoform 1 precursor
[Homo sapiens].
Length = 942
Score = 377 bits (967), Expect = e-104
Identities = 232/613 (37%), Positives = 345/613 (56%), Gaps = 30/613 (4%)
Frame = +1
Query: 172 TVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXX 351
+V S + SR+A T V+ R++N+ S Q+ FQM++P AFITNF+M+I Y G I
Sbjct: 55 SVKSTIISRYAFTTVSCRMLNRASEDQDIEFQMQIPAAAFITNFTMLIGDKVYQGEITER 114
Query: 352 XXXXXXXXXXXXRGESAGLVRATGRK-TEQFQVAVSVAPAAKVTFELVYEELLARHLGVY 528
+ + G K TE F+ + + K F L YEELL R LG Y
Sbjct: 115 EKKSGDRV----KEKRNKTTEENGEKGTEIFRASAVIPSKDKAAFFLSYEELLQRRLGKY 170
Query: 529 ELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAE-----------ALTISQ 675
E + ++PQQL L +D++I E GI+ LE + + + I+Q
Sbjct: 171 EHSISVRPQQLSGRLSVDVNILESAGIASLEVLPLHNSRQRGSGRGEDDSGPPPSTVINQ 230
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
N+T A+I FKPT+ QQ + Q +L G+FI+RYDVNR + G IQ+ NGYFVHYFAP+
Sbjct: 231 NETFANIIFKPTVVQQARIA--QNGIL-GDFIIRYDVNREQSIGDIQVLNGYFVHYFAPK 287
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGL 1035
L +PKNV+FV+D+S SM G K++QT++AL IL DL +D+F+++ FS WK L
Sbjct: 288 DLPPLPKNVVFVLDSSASMVGTKLRQTKDALFTILHDLRPQDRFSIIGFSNRIKVWKDHL 347
Query: 1036 LPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDG 1215
+ + +++ + K Y + GGT+IN A+ A++LL + + RSV+LI+ LTDG
Sbjct: 348 ISVTPDSIRDGKVYIHHMSPTGGTDINGALQRAIRLLNKYVAHSGIGDRSVSLIVFLTDG 407
Query: 1216 DPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDS 1395
PTVGET+ KI N REA GQ +F +G G DV + LEK++LEN GL RR++E+ D+
Sbjct: 408 KPTVGETHTLKILNNTREAARGQVCIFTIGIGNDVDFRLLEKLSLENCGLTRRVHEEEDA 467
Query: 1396 ALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLS 1575
QL FY E+ PLL + +YP ++V T+ F +F GSE+++AGKL D+ D L
Sbjct: 468 GSQLIGFYDEIRTPLLSDIRIDYPPSSVVQATKTLFPNYFNGSEIIIAGKLVDRKLDHLH 527
Query: 1576 AKVRGQLHMENVTFVMESRVAEQEA---EFLSPK-----YIFHSFMERLWAYLTIQQLLA 1731
+V + + + V Q+A SP+ + +ERLW+YLT ++LL+
Sbjct: 528 VEVTASNSKKFIILKTDVPVRPQKAGKDVTGSPRPGGDGEGDTNHIERLWSYLTTKELLS 587
Query: 1732 QTVSASD-AEKKALEARALSLSLNYSFVTPLTSMVITKP----EGQEQSQ-----VAEKP 1881
+ + D EK+ L RA +L+++Y F+TP TSM + P +G E++ + +P
Sbjct: 588 SWLQSDDEPEKERLRQRAQALAVSYRFLTPFTSMKLRGPVPRMDGLEEAHGMSAAMGPEP 647
Query: 1882 VENGNRQGNTHSG 1920
V R T G
Sbjct: 648 VVQSVRGAGTQPG 660
>ref|NP_001001851.1| inter-alpha-trypsin inhibitor heavy chain H5 isoform 3 precursor
[Homo sapiens].
Length = 702
Score = 377 bits (967), Expect = e-104
Identities = 232/613 (37%), Positives = 345/613 (56%), Gaps = 30/613 (4%)
Frame = +1
Query: 172 TVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIXXX 351
+V S + SR+A T V+ R++N+ S Q+ FQM++P AFITNF+M+I Y G I
Sbjct: 55 SVKSTIISRYAFTTVSCRMLNRASEDQDIEFQMQIPAAAFITNFTMLIGDKVYQGEITER 114
Query: 352 XXXXXXXXXXXXRGESAGLVRATGRK-TEQFQVAVSVAPAAKVTFELVYEELLARHLGVY 528
+ + G K TE F+ + + K F L YEELL R LG Y
Sbjct: 115 EKKSGDRV----KEKRNKTTEENGEKGTEIFRASAVIPSKDKAAFFLSYEELLQRRLGKY 170
Query: 529 ELLLKIQPQQLVKHLQMDIHIFEPQGISFLETESTFMTNELAE-----------ALTISQ 675
E + ++PQQL L +D++I E GI+ LE + + + I+Q
Sbjct: 171 EHSISVRPQQLSGRLSVDVNILESAGIASLEVLPLHNSRQRGSGRGEDDSGPPPSTVINQ 230
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
N+T A+I FKPT+ QQ + Q +L G+FI+RYDVNR + G IQ+ NGYFVHYFAP+
Sbjct: 231 NETFANIIFKPTVVQQARIA--QNGIL-GDFIIRYDVNREQSIGDIQVLNGYFVHYFAPK 287
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKGL 1035
L +PKNV+FV+D+S SM G K++QT++AL IL DL +D+F+++ FS WK L
Sbjct: 288 DLPPLPKNVVFVLDSSASMVGTKLRQTKDALFTILHDLRPQDRFSIIGFSNRIKVWKDHL 347
Query: 1036 LPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILLTDG 1215
+ + +++ + K Y + GGT+IN A+ A++LL + + RSV+LI+ LTDG
Sbjct: 348 ISVTPDSIRDGKVYIHHMSPTGGTDINGALQRAIRLLNKYVAHSGIGDRSVSLIVFLTDG 407
Query: 1216 DPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYEDSDS 1395
PTVGET+ KI N REA GQ +F +G G DV + LEK++LEN GL RR++E+ D+
Sbjct: 408 KPTVGETHTLKILNNTREAARGQVCIFTIGIGNDVDFRLLEKLSLENCGLTRRVHEEEDA 467
Query: 1396 ALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPDVLS 1575
QL FY E+ PLL + +YP ++V T+ F +F GSE+++AGKL D+ D L
Sbjct: 468 GSQLIGFYDEIRTPLLSDIRIDYPPSSVVQATKTLFPNYFNGSEIIIAGKLVDRKLDHLH 527
Query: 1576 AKVRGQLHMENVTFVMESRVAEQEA---EFLSPK-----YIFHSFMERLWAYLTIQQLLA 1731
+V + + + V Q+A SP+ + +ERLW+YLT ++LL+
Sbjct: 528 VEVTASNSKKFIILKTDVPVRPQKAGKDVTGSPRPGGDGEGDTNHIERLWSYLTTKELLS 587
Query: 1732 QTVSASD-AEKKALEARALSLSLNYSFVTPLTSMVITKP----EGQEQSQ-----VAEKP 1881
+ + D EK+ L RA +L+++Y F+TP TSM + P +G E++ + +P
Sbjct: 588 SWLQSDDEPEKERLRQRAQALAVSYRFLTPFTSMKLRGPVPRMDGLEEAHGMSAAMGPEP 647
Query: 1882 VENGNRQGNTHSG 1920
V R T G
Sbjct: 648 VVQSVRGAGTQPG 660
>ref|NP_940912.1| inter-alpha-trypsin inhibitor heavy chain H5-like protein precursor
[Homo sapiens].
Length = 1313
Score = 367 bits (942), Expect = e-101
Identities = 233/607 (38%), Positives = 336/607 (55%), Gaps = 22/607 (3%)
Frame = +1
Query: 166 SLTVDSKVSSRFAHTVVTSRVVNKGSAVQEATFQMELPKKAFITNFSMIIDGVTYPGNIX 345
S ++ S V SR+AHT+VTS + N + EA F ++LP AFI+NF+M I+ Y +
Sbjct: 39 SYSMRSTVVSRYAHTLVTSVLFNPHAEAHEAIFDLDLPHLAFISNFTMTINNKVYIAEVK 98
Query: 346 XXXXXXXXXXXXXXRGESAGLVRATGRKTEQFQVAVSVAPAAKVTFELVYEELLARHLGV 525
+G++A V R++E+F+++ S+A +VTF L YEELL RH G
Sbjct: 99 EKHQAKKIYEEAHQQGKTAAHVGIRDRESEKFRISTSLAAGTEVTFSLAYEELLQRHQGQ 158
Query: 526 YELLLKIQPQQLVKHLQMDIHIFEPQGISF----------LETESTFMTNELAEALTISQ 675
Y+L++ ++P QLVK L +++ + E GIS+ L T + + + I +
Sbjct: 159 YQLVVSLRPGQLVKRLSIEVTVSERTGISYVHIPPLRTGRLRTNAHASEVDSPPSTRIER 218
Query: 676 NKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYFAPE 855
+T I + PTL Q Q S + D F+V+YDV G +QI + YF+HYFAP
Sbjct: 219 GETCVRITYCPTL-QDQSSISGSGIMAD--FLVQYDVVMEDIIGDVQIYDDYFIHYFAPR 275
Query: 856 GLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWKKG- 1032
GL + KNV+FVID S SM G K++QT+ A+ IL DL + D FN++SFS WK G
Sbjct: 276 GLPPMEKNVVFVIDVSSSMFGTKMEQTKTAMNVILSDLQANDYFNIISFSDTVNVWKAGG 335
Query: 1033 LLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARS-----VTLI 1197
+ A+ +NV AK Y + A G T++N A+L A +L +N+E P R + LI
Sbjct: 336 SIQATIQNVHSAKDYLHCMEADGWTDVNSALLAAASVLNHSNQE---PGRGPSVGRIPLI 392
Query: 1198 ILLTDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRI 1377
I LTDG+PT G T PS I NVR+A+ + SLF L FG D + L +++LEN G+ARRI
Sbjct: 393 IFLTDGEPTAGVTTPSVILSNVRQALGHRVSLFSLAFGDDADFTLLRRLSLENRGIARRI 452
Query: 1378 YEDSDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQ 1557
YED+D+ALQL+ Y+E++ PLL V Y V A F +F GSELVVAG+++
Sbjct: 453 YEDTDAALQLKGLYEEISMPLLADVRLNYLGGLVGASPWAVFPNYFGGSELVVAGQVQPG 512
Query: 1558 SPDV-LSAKVRGQLHMENVTFVMESRVAEQEAEFLSP----KYIFHSFMERLWAYLTIQQ 1722
++ + RG V E + F P + H F+ RLWAY+TI +
Sbjct: 513 KQELGIHLAARGPKDQLLVAHHSEGATNNSQKAFGCPGEPAPNVAH-FIRRLWAYVTIGE 571
Query: 1723 LLAQTVSASD-AEKKALEARALSLSLNYSFVTPLTSMVITKPEGQEQSQVAEKPVENGNR 1899
LL A D + L A+ L+LSL Y+FVTPLTS+V+ +P ++ E R
Sbjct: 572 LLDAHFQARDTTTRHLLAAKVLNLSLEYNFVTPLTSLVMVQP---------KQASEETRR 622
Query: 1900 QGNTHSG 1920
Q +T +G
Sbjct: 623 QTSTSAG 629
>ref|NP_116206.4| inter-alpha-trypsin inhibitor heavy chain H5 isoform 2 [Homo
sapiens].
Length = 728
Score = 300 bits (769), Expect = 3e-81
Identities = 176/436 (40%), Positives = 262/436 (60%), Gaps = 18/436 (4%)
Frame = +1
Query: 667 ISQNKTKAHIRFKPTLSQQQKSPEQQETVLDGNFIVRYDVNRTVTGGSIQIENGYFVHYF 846
I+QN+T A+I FKPT+ QQ + Q +L G+FI+RYDVNR + G IQ+ NGYFVHYF
Sbjct: 14 INQNETFANIIFKPTVVQQARIA--QNGIL-GDFIIRYDVNREQSIGDIQVLNGYFVHYF 70
Query: 847 APEGLSAIPKNVIFVIDTSGSMRGRKIQQTREALIKILGDLGSRDQFNLVSFSGEATQWK 1026
AP+ L +PKNV+FV+D+S SM G K++QT++AL IL DL +D+F+++ FS WK
Sbjct: 71 APKDLPPLPKNVVFVLDSSASMVGTKLRQTKDALFTILHDLRPQDRFSIIGFSNRIKVWK 130
Query: 1027 KGLLPASAENVEEAKSYAAKIHAQGGTNINDAMLMAVQLLERANREELLPARSVTLIILL 1206
L+ + +++ + K Y + GGT+IN A+ A++LL + + RSV+LI+ L
Sbjct: 131 DHLISVTPDSIRDGKVYIHHMSPTGGTDINGALQRAIRLLNKYVAHSGIGDRSVSLIVFL 190
Query: 1207 TDGDPTVGETNPSKIQKNVREAIDGQHSLFCLGFGFDVSYAFLEKMALENGGLARRIYED 1386
TDG PTVGET+ KI N REA GQ +F +G G DV + LEK++LEN GL RR++E+
Sbjct: 191 TDGKPTVGETHTLKILNNTREAARGQVCIFTIGIGNDVDFRLLEKLSLENCGLTRRVHEE 250
Query: 1387 SDSALQLEDFYQEVANPLLRLVAFEYPSNAVEAVTQDNFRLFFKGSELVVAGKLRDQSPD 1566
D+ QL FY E+ PLL + +YP ++V T+ F +F GSE+++AGKL D+ D
Sbjct: 251 EDAGSQLIGFYDEIRTPLLSDIRIDYPPSSVVQATKTLFPNYFNGSEIIIAGKLVDRKLD 310
Query: 1567 VLSAKVRGQLHMENVTFVMESRVAEQEA---EFLSPK-----YIFHSFMERLWAYLTIQQ 1722
L +V + + + V Q+A SP+ + +ERLW+YLT ++
Sbjct: 311 HLHVEVTASNSKKFIILKTDVPVRPQKAGKDVTGSPRPGGDGEGDTNHIERLWSYLTTKE 370
Query: 1723 LLAQTVSASD-AEKKALEARALSLSLNYSFVTPLTSMVITKP----EGQEQSQ-----VA 1872
LL+ + + D EK+ L RA +L+++Y F+TP TSM + P +G E++ +
Sbjct: 371 LLSSWLQSDDEPEKERLRQRAQALAVSYRFLTPFTSMKLRGPVPRMDGLEEAHGMSAAMG 430
Query: 1873 EKPVENGNRQGNTHSG 1920
+PV R T G
Sbjct: 431 PEPVVQSVRGAGTQPG 446
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.317 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 95,767,065
Number of extensions: 2770940
Number of successful extensions: 10795
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 10728
Number of HSP's successfully gapped: 15
Length of query: 797
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 686
Effective length of database: 14,638,160
Effective search space: 10041777760
Effective search space used: 10041777760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007767
(2392 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr13 373 e-100
>Sscrofa_Chr13
|| Length = 218635234
Score = 373 bits (188), Expect = e-100
Identities = 188/188 (100%)
Strand = Plus / Plus
Query: 1409 aggacttctaccaggaggtggccaacccactgctgaggttggtggcctttgagtacccaa 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38204611 aggacttctaccaggaggtggccaacccactgctgaggttggtggcctttgagtacccaa 38204670
Query: 1469 gcaatgccgtggaggcagtcacgcaggacaacttccggctgttcttcaaaggctctgagt 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38204671 gcaatgccgtggaggcagtcacgcaggacaacttccggctgttcttcaaaggctctgagt 38204730
Query: 1529 tggtggtggccgggaagctccgggaccagagccccgatgtgctctccgccaaagtcaggg 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38204731 tggtggtggccgggaagctccgggaccagagccccgatgtgctctccgccaaagtcaggg 38204790
Query: 1589 ggcaactg 1596
||||||||
Sbjct: 38204791 ggcaactg 38204798
Score = 365 bits (184), Expect = 7e-98
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 1228 ggggagaccaacccctcgaagatccagaagaacgttcgggaagccatagacggccagcac 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38204339 ggggagaccaacccctcgaagatccagaagaacgttcgggaagccatagacggccagcac 38204398
Query: 1288 agcctcttctgcctgggcttcggctttgacgtcagctacgccttcctggagaagatggca 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38204399 agcctcttctgcctgggcttcggctttgacgtcagctacgccttcctggagaagatggca 38204458
Query: 1348 ctggagaatggcggtctggcccggcgcatctatgaggactctgactctgccctgcagctc 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38204459 ctggagaatggcggtctggcccggcgcatctatgaggactctgactctgccctgcagctc 38204518
Query: 1408 gagg 1411
||||
Sbjct: 38204519 gagg 38204522
Score = 335 bits (169), Expect = 7e-89
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 931 cagacccgggaagccctaattaagatcctgggtgacctcggctcccgcgaccagttcaac 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38203768 cagacccgggaagccctaattaagatcctgggtgacctcggctcccgcgaccagttcaac 38203827
Query: 991 cttgtcagcttcagtggggaagccacccagtggaagaaggggctgttgccagcctcagct 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38203828 cttgtcagcttcagtggggaagccacccagtggaagaaggggctgttgccagcctcagct 38203887
Query: 1051 gagaacgtggaggaagccaagagctatgctgccaaaatccatgcccagggagg 1103
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 38203888 gagaacgtggaggaagccaagagctatgctgccgaaatccatgcccagggagg 38203940
Score = 329 bits (166), Expect = 4e-87
Identities = 166/166 (100%)
Strand = Plus / Plus
Query: 411 cagggccactgggagaaagacagagcagttccaggtggcagtcagcgtggctcctgctgc 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38201708 cagggccactgggagaaagacagagcagttccaggtggcagtcagcgtggctcctgctgc 38201767
Query: 471 caaggtcaccttcgagctggtgtatgaggagcttctggcacggcatctgggagtgtatga 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38201768 caaggtcaccttcgagctggtgtatgaggagcttctggcacggcatctgggagtgtatga 38201827
Query: 531 gctgctgttgaaaatccagccccagcagctggtcaagcacctgcag 576
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38201828 gctgctgttgaaaatccagccccagcagctggtcaagcacctgcag 38201873
Score = 325 bits (164), Expect = 6e-86
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 146 agaatgacatcaacatctacagtctcaccgtggactccaaggtctcgtcccgatttgccc 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38198810 agaatgacatcaacatctacagtctcaccgtggactccaaggtctcgtcccgatttgccc 38198869
Query: 206 acacagtcgttaccagccgagtggtcaacaagggcagtgctgtgcaggaggccaccttcc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38198870 acacagtcgttaccagccgagtggtcaacaagggcagtgctgtgcaggaggccaccttcc 38198929
Query: 266 agatggagctgcccaagaaggctttcatcaccaacttctccatg 309
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38198930 agatggagctgcccaagaaggctttcatcaccaacttctccatg 38198973
Score = 309 bits (156), Expect = 4e-81
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 1737 agtctctgcgtcagatgctgagaagaaggcccttgaagcccgagccctgagcttgtcact 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38206717 agtctctgcgtcagatgctgagaagaaggcccttgaagcccgagccctgagcttgtcact 38206776
Query: 1797 caactacagctttgtcacccctctcacatctatggtgatcaccaaacctgaaggccaaga 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38206777 caactacagctttgtcacccctctcacatctatggtgatcaccaaacctgaaggccaaga 38206836
Query: 1857 acagtctcaggttgctgagaagcccgtggaaaatgg 1892
||||||||||||||||||||||||||||||||||||
Sbjct: 38206837 acagtctcaggttgctgagaagcccgtggaaaatgg 38206872
Score = 291 bits (147), Expect = 9e-76
Identities = 147/147 (100%)
Strand = Plus / Plus
Query: 1 ttcattccacgcttcttcttaagttcagaagccagcctgacaggcagaggagccaaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38197456 ttcattccacgcttcttcttaagttcagaagccagcctgacaggcagaggagccaaaatg 38197515
Query: 61 aagaccctctcccctactggtgcctacggccttctgctggtcctgcccttgctgctggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38197516 aagaccctctcccctactggtgcctacggccttctgctggtcctgcccttgctgctggct 38197575
Query: 121 gtccttcagagcaccacggcccacaag 147
|||||||||||||||||||||||||||
Sbjct: 38197576 gtccttcagagcaccacggcccacaag 38197602
Score = 280 bits (141), Expect = 3e-72
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 1596 gcacatggagaatgtcaccttcgtaatggagtccagggtagcagagcaggaggcggagtt 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38206342 gcacatggagaatgtcaccttcgtaatggagtccagggtagcagagcaggaggcggagtt 38206401
Query: 1656 cctgagccccaagtacatcttccacagcttcatggagagactctgggcatacctgaccat 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38206402 cctgagccccaagtacatcttccacagcttcatggagagactctgggcatacctgaccat 38206461
Query: 1716 ccagcaactgttggcgcaaac 1736
|||||||||||||||||||||
Sbjct: 38206462 ccagcaactgttggcgcaaac 38206482
Score = 256 bits (129), Expect = 5e-65
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 1101 agggaccaatataaatgatgcgatgctgatggccgtgcagctgctggaaagagccaaccg 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38204030 agggaccaatataaatgatgcgatgctgatggccgtgcagctgctggaaagagccaaccg 38204089
Query: 1161 ggaggagctgctgcccgcgaggagcgttaccctcatcatcctcctcaccgatggcgaccc 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38204090 ggaggagctgctgcccgcgaggagcgttaccctcatcatcctcctcaccgatggcgaccc 38204149
Query: 1221 cactgtggg 1229
|||||||||
Sbjct: 38204150 cactgtggg 38204158
Score = 252 bits (127), Expect = 8e-64
Identities = 130/131 (99%)
Strand = Plus / Plus
Query: 686 aggctcacatccgattcaagccgacactctcccagcagcagaagtccccagagcagcagg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38202607 aggctcacatccgattcaagccgacactctcccagcagcagaagtccccagagcagcagg 38202666
Query: 746 aaacagtcctggatggcaacttcatcgtccgctatgatgtgaaccggacagtcactgggg 805
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38202667 aaacggtcctggatggcaacttcatcgtccgctatgatgtgaaccggacagtcactgggg 38202726
Query: 806 gttccattcag 816
|||||||||||
Sbjct: 38202727 gttccattcag 38202737
Score = 226 bits (114), Expect = 4e-56
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 575 agatggacattcacatcttcgagcctcagggcatcagctttctggagacagagagcacct 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38202001 agatggacattcacatcttcgagcctcagggcatcagctttctggagacagagagcacct 38202060
Query: 635 ttatgaccaatgaactggcagaggccctcaccatatcacagaacaagactaagg 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38202061 ttatgaccaatgaactggcagaggccctcaccatatcacagaacaagactaagg 38202114
Score = 214 bits (108), Expect = 2e-52
Identities = 117/120 (97%)
Strand = Plus / Plus
Query: 814 cagatcgagaatggctactttgtgcattactttgccccggagggtctgtctgcaataccc 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38203394 cagatcgagaatggctactttgtgcattactttgccccggagggtctgtctgcaataccc 38203453
Query: 874 aagaacgtgatctttgtcattgacacgagcggctccatgaggggcaggaaaatccagcag 933
||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 38203454 aagaacgtggtctttgtcattgatacaagcggctccatgaggggcaggaaaatccagcag 38203513
Score = 210 bits (106), Expect = 3e-51
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 309 gatcatcgatggtgtgacctacccaggtaacatcaaggagaaggctgcagcccaggagca 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38201465 gatcatcgatggtgtgacctacccaggtaacatcaaggagaaggctgcagcccaggagca 38201524
Query: 369 gtacagcgcagccgtggccaggggagagagtgctggccttgtcagg 414
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38201525 gtacagcgcagccgtggccaggggagagagtgctggccttgtcagg 38201570
Score = 176 bits (89), Expect = 4e-41
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 2025 aggaccccccggacctcttcagcctactcgtttttctcatccgttttcccgtataacctt 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38208024 aggaccccccggacctcttcagcctactcgtttttctcatccgttttcccgtataacctt 38208083
Query: 2085 ggaccgggtgctgccagaggtgctatccg 2113
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Sbjct: 38208084 ggaccgggtgctgccagaggtgctatccg 38208112
Score = 113 bits (57), Expect = 5e-22
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 1971 aggaggcagcagtgtagaccctgttttttctcacagaagaggctggaaaggacaagg 2027
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Sbjct: 38207690 aggaggcagcagtgtagaccctgttttttctcacagaagaggctggaaaggacaagg 38207746
Score = 107 bits (54), Expect = 3e-20
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1916 caggtcactattcctttcaatttcattctgtgggagacagaacatccagactaacagg 1973
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Sbjct: 38207481 caggtcactcttcctttcaatttcattctgtgggagacagaacatccagactaacagg 38207538
Score = 87.7 bits (44), Expect = 3e-14
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 2113 gttcctgatgaaacgtcacatgacatggattcaagaatcatagg 2156
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Sbjct: 38208633 gttcctgatgaaacgtcacatgacatggattcaagaatcatagg 38208676
Score = 60.0 bits (30), Expect = 6e-06
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1891 ggaaaccgacaggggaacacccactcaggt 1920
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Sbjct: 38207171 ggaaaccgacaggggaacacccactcaggt 38207200
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 67,651,440
Number of extensions: 346
Number of successful extensions: 346
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 346
Number of HSP's successfully gapped: 18
Length of query: 2392
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2370
Effective length of database: 2,808,408,574
Effective search space: 6655928320380
Effective search space used: 6655928320380
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)