Animal-Genome cDNA 20110601C-007808

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007808
         (1995 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001069442.1| ADP-ribosylation factor GTPase-activating pr...   859   0.0  
Alignment   gi|NP_001073696.1| ADP-ribosylation factor GTPase-activating pr...   473   e-133
Alignment   gi|NP_001068732.1| ADP-ribosylation factor GTPase-activating pr...   108   2e-23
Alignment   gi|NP_001069138.1| stromal membrane-associated protein 2 [Bos t...    80   9e-15
Alignment   gi|XP_002690054.1| PREDICTED: small ArfGAP 1 isoform 2 [Bos tau...    80   9e-15
Alignment   gi|XP_002690053.1| PREDICTED: small ArfGAP 1 isoform 1 [Bos tau...    80   9e-15
Alignment   gi|NP_001077156.1| arf-GAP with coiled-coil, ANK repeat and PH ...    78   3e-14
Alignment   gi|XP_002687095.1| PREDICTED: ArfGAP with GTPase domain, ankyri...    78   3e-14
Alignment   gi|NP_001178968.1| arf-GAP with GTPase, ANK repeat and PH domai...    75   3e-13
Alignment   gi|XP_002687603.1| PREDICTED: ArfGAP with GTPase domain, ankyri...    75   3e-13

>ref|NP_001069442.1| ADP-ribosylation factor GTPase-activating protein 3 [Bos taurus].
          Length = 517

 Score =  859 bits (2220), Expect = 0.0
 Identities = 435/514 (84%), Positives = 453/514 (88%), Gaps = 1/514 (0%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGNA+ASSFFHQHGC TNDTNAKYNSRAAQLYRERIK+L
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCDTNDTNAKYNSRAAQLYRERIKAL 120

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
            ASQATRKHGTDLWLDSC         KEEDFFASHASPE S  GWASA PEPS LT RNV
Sbjct: 121  ASQATRKHGTDLWLDSCVVPPSSPPPKEEDFFASHASPEVSSTGWASAQPEPS-LTPRNV 179

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAAL-EVSSIIKKKPNQARRGLGAKKGSLGAQKLAN 798
            D P A+SEG  EQGPSVEGLNVPTKAA+ EVSSIIKKKPNQA+RGLGAKKGSLGAQKL+N
Sbjct: 180  DAPAASSEGVPEQGPSVEGLNVPTKAAVGEVSSIIKKKPNQAKRGLGAKKGSLGAQKLSN 239

Query: 799  TSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQK 978
            T FNEIEKQAQAVDKM  QEDLL+R A KEESIVSSLRLAYKDLEIQMKK+EKMNMSG+K
Sbjct: 240  TCFNEIEKQAQAVDKMNAQEDLLSRAAPKEESIVSSLRLAYKDLEIQMKKDEKMNMSGKK 299

Query: 979  KVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFTSTSRYFD 1158
            K ESERLGMGFGN RSGISHSVTSDMQTIEQETP+ AKPRKKY DD+DDSYFTS+SR+FD
Sbjct: 300  KAESERLGMGFGNSRSGISHSVTSDMQTIEQETPITAKPRKKYGDDSDDSYFTSSSRFFD 359

Query: 1159 EPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQ 1338
            EPMELR             YWKKETIKDTDP  K TGYTDRP  RRKPD EP ++TDEAQ
Sbjct: 360  EPMELRSSSFSSWDDSSDSYWKKETIKDTDPIPKNTGYTDRPTTRRKPDSEPAENTDEAQ 419

Query: 1339 KKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQTAGNYNLTSV 1518
            KKFGNVKAISSDMYFGRQA+ADYE RARLER          DLF+EQRKQTAG+YNLTSV
Sbjct: 420  KKFGNVKAISSDMYFGRQAKADYEARARLERLSASSSISSADLFDEQRKQTAGSYNLTSV 479

Query: 1519 LPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            LPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD
Sbjct: 480  LPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 513


>ref|NP_001073696.1| ADP-ribosylation factor GTPase-activating protein 2 [Bos taurus].
          Length = 520

 Score =  473 bits (1216), Expect = e-133
 Identities = 271/527 (51%), Positives = 351/527 (66%), Gaps = 16/527 (3%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +P+K +I T FKRLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4    EPNKTEIQTFFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDS WSWFQLRCMQVGGNA+A++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 64   RSTELDSTWSWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 123

Query: 448  QATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVD 624
             A  +HGTDLW DS          K+E DFF  H  P    P W +AP    S T +   
Sbjct: 124  AALARHGTDLWTDSVSTAPSHSPEKKESDFFLEHTQP----PAW-NAPVTDLSETQQ--P 176

Query: 625  TPPANSEGGA--EQGPSVEGLNVPTKAALE--VSSIIKKKPNQARRGLGAKKGSLGAQKL 792
             P A S G A  E GP+++ L    KA+LE   S I KKKP  A++GLGAKKG LGAQK+
Sbjct: 177  APSAESSGLAQPEHGPNMDLLGTSPKASLEPKTSLIGKKKPAAAKKGLGAKKG-LGAQKV 235

Query: 793  ANTSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MNM 966
            ++ SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N+
Sbjct: 236  SSQSFSEIERQAQVAEKLREQQVADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQNL 294

Query: 967  SGQKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTS 1140
             G+K+ ++ERLGMG  + RS +SHSV S+MQ IEQETPV AK  +   D  DD  ++ + 
Sbjct: 295  EGKKREQAERLGMGLVS-RSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASG 353

Query: 1141 TSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD 1320
              +Y D P  L               W  + +++ +P  + T  + RP + R  +   V+
Sbjct: 354  PPKYKDNPFSL--GESFGSRWDTDTAWGMDRMEEKEP--EVTVSSIRPVSERVTNRREVE 409

Query: 1321 ------DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EEQ 1479
                  ++ EA++KF   KAISSDM+FGR+   +YE R+RL++          DLF +  
Sbjct: 410  SRSSGLESSEARQKFAGAKAISSDMFFGREVDTEYEARSRLQQLSGSSAISSSDLFGDVD 469

Query: 1480 RKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
                AG+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 470  GAHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 515


>ref|NP_001068732.1| ADP-ribosylation factor GTPase-activating protein 1 [Bos taurus].
          Length = 405

 Score =  108 bits (270), Expect = 2e-23
 Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
 Frame = +1

Query: 115 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNW 294
           + K +R+   N VCF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVTMD-KW 67

Query: 295 SWFQLRCMQVGGNASASSFFHQHGCATN--DTNAKYNSRAAQLYRERIKSLA 444
              +L  M+ GGNA    F               KY+SRAA L+R+R+ +LA
Sbjct: 68  KDVELEKMKAGGNARFREFLESQEDYDPCWSLQEKYSSRAAALFRDRVAALA 119


>ref|NP_001069138.1| stromal membrane-associated protein 2 [Bos taurus].
          Length = 429

 Score = 79.7 bits (195), Expect = 9e-15
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = +1

Query: 145 NKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQV 324
           NK C DC +K P WAS   GVF+CI C+G HR+LGVH+S ++S  LD  W+  Q++CMQ 
Sbjct: 25  NKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD-QWTQEQIQCMQE 83

Query: 325 GGNASASSFFHQH 363
            GN  A+  +  +
Sbjct: 84  MGNGKANRLYEAY 96


>ref|XP_002690054.1| PREDICTED: small ArfGAP 1 isoform 2 [Bos taurus].
          Length = 471

 Score = 79.7 bits (195), Expect = 9e-15
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  SKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRS 273
           ++Q  L + K LR    NK C DC AK P WAS   GVF+CI C+G HR+LGVH+S ++S
Sbjct: 14  NEQHQLILSKLLRE-EDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKS 72

Query: 274 TELDSNWSWFQLRCMQVGGNASA 342
             LD  W+  Q++CMQ  GN  A
Sbjct: 73  VNLD-QWTPEQIQCMQDMGNTKA 94


>ref|XP_002690053.1| PREDICTED: small ArfGAP 1 isoform 1 [Bos taurus].
          Length = 444

 Score = 79.7 bits (195), Expect = 9e-15
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  SKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRS 273
           ++Q  L + K LR    NK C DC AK P WAS   GVF+CI C+G HR+LGVH+S ++S
Sbjct: 14  NEQHQLILSKLLRE-EDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKS 72

Query: 274 TELDSNWSWFQLRCMQVGGNASA 342
             LD  W+  Q++CMQ  GN  A
Sbjct: 73  VNLD-QWTPEQIQCMQDMGNTKA 94


>ref|NP_001077156.1| arf-GAP with coiled-coil, ANK repeat and PH domain-containing
           protein 3 [Bos taurus].
          Length = 833

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 38/81 (46%), Positives = 52/81 (64%)
 Frame = +1

Query: 112 TIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSN 291
           ++ +R+++V  N  C DCG  +P WASI  GV LCI+CSG HRSLGVH S +RS  LDS 
Sbjct: 404 SVLQRVQNVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDS- 462

Query: 292 WSWFQLRCMQVGGNASASSFF 354
           W    L+ M   GN++ +  +
Sbjct: 463 WEPELLKLMCELGNSTVNQIY 483


>ref|XP_002687095.1| PREDICTED: ArfGAP with GTPase domain, ankyrin repeat and PH domain
           3 [Bos taurus].
          Length = 896

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 44/110 (40%), Positives = 59/110 (53%)
 Frame = +1

Query: 100 QDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTE 279
           Q+     + +R+V  N  C DC A NP WAS+  G  +CI+CSG+HR LG HLS +RS +
Sbjct: 644 QNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSGTHRHLGAHLSRVRSLD 703

Query: 280 LDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRER 429
           LD +W    L  M   GNA A+S +        D  AK    A +  +ER
Sbjct: 704 LD-DWPPELLAVMTAMGNALANSVWE----GALDGYAKPGPEACREEKER 748


>ref|NP_001178968.1| arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
            [Bos taurus].
          Length = 1188

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = +1

Query: 70   SLVTMGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLG 249
            S V +   S+ + + I + +R+   N +C DCGA NP+WAS+  G  +CI+CSG HR+LG
Sbjct: 915  SKVKLRTDSQSEAVAI-QAIRNAKGNSICVDCGAPNPTWASLNLGALICIECSGIHRNLG 973

Query: 250  VHLSFIRSTELD 285
             HLS +RS +LD
Sbjct: 974  THLSRVRSLDLD 985


>ref|XP_002687603.1| PREDICTED: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
            [Bos taurus].
          Length = 1188

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = +1

Query: 70   SLVTMGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLG 249
            S V +   S+ + + I + +R+   N +C DCGA NP+WAS+  G  +CI+CSG HR+LG
Sbjct: 915  SKVKLRTDSQSEAVAI-QAIRNAKGNSICVDCGAPNPTWASLNLGALICIECSGIHRNLG 973

Query: 250  VHLSFIRSTELD 285
             HLS +RS +LD
Sbjct: 974  THLSRVRSLDLD 985


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.317    0.132    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 83,463,703
Number of extensions: 2572582
Number of successful extensions: 11519
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 11434
Number of HSP's successfully gapped: 37
Length of query: 665
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 556
Effective length of database: 14,074,782
Effective search space: 7825578792
Effective search space used: 7825578792
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007808
         (1995 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_848847.1| PREDICTED: similar to ADP-ribosylation factor G...   878   0.0  
Alignment   gi|XP_531706.2| PREDICTED: similar to ADP-ribosylation factor G...   876   0.0  
Alignment   gi|XP_857414.1| PREDICTED: similar to ADP-ribosylation factor G...   870   0.0  
Alignment   gi|XP_857369.1| PREDICTED: similar to ADP-ribosylation factor G...   869   0.0  
Alignment   gi|XP_857331.1| PREDICTED: similar to ADP-ribosylation factor G...   867   0.0  
Alignment   gi|XP_540747.2| PREDICTED: similar to zinc finger protein 289, ...   469   e-132
Alignment   gi|XP_861361.1| PREDICTED: similar to zinc finger protein 289, ...   467   e-131
Alignment   gi|XP_861391.1| PREDICTED: similar to zinc finger protein 289, ...   464   e-130
Alignment   gi|XP_861332.1| PREDICTED: similar to zinc finger protein 289, ...   456   e-128
Alignment   gi|XP_861308.1| PREDICTED: similar to zinc finger protein 289, ...   241   2e-63

>ref|XP_848847.1| PREDICTED: similar to ADP-ribosylation factor GTPase activating
            protein 3 isoform 2 [Canis familiaris].
          Length = 517

 Score =  878 bits (2269), Expect = 0.0
 Identities = 439/513 (85%), Positives = 459/513 (89%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDIL+IF+RLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGNA+ASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 120

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
            ASQATRKHGTDLWLDSC         KEEDFFASH SPE SG GWASA PE SSL  RNV
Sbjct: 121  ASQATRKHGTDLWLDSCVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNV 180

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKLANT 801
            +T PAN+EGG EQGPSVEGLN PTKAA EVSSIIKKKPNQA+RGLGAKKGSLGAQK+ NT
Sbjct: 181  ETTPANNEGGPEQGPSVEGLNAPTKAASEVSSIIKKKPNQAKRGLGAKKGSLGAQKVTNT 240

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKK 981
             FNEIEKQAQAVDKMKEQED LAR A KEESIVSSLRLAYKDLEIQMKK+EK+NMSG+KK
Sbjct: 241  CFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEKVNMSGKKK 300

Query: 982  VESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFTSTSRYFDE 1161
            +ESERLGMGFGNCRSGISHSVTSDMQTIEQETP+VAKPRKKYSDD+DDSYFTS+SRY DE
Sbjct: 301  IESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDDSYFTSSSRYLDE 360

Query: 1162 PMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQK 1341
            PME R             YWKKETIKDTD  LKTTGY+DR  ARRKPD+EPV++TDEAQK
Sbjct: 361  PMEFRSNSFSSWDDSSESYWKKETIKDTDTILKTTGYSDRSTARRKPDYEPVENTDEAQK 420

Query: 1342 KFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQTAGNYNLTSVL 1521
            KFGNVKAISSDMYFGRQAQADYETRARLER          DLF+EQRKQTAG+YNLTSVL
Sbjct: 421  KFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLFDEQRKQTAGSYNLTSVL 480

Query: 1522 PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD
Sbjct: 481  PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 513


>ref|XP_531706.2| PREDICTED: similar to ADP-ribosylation factor GTPase activating
            protein 3 isoform 1 [Canis familiaris].
          Length = 542

 Score =  876 bits (2263), Expect = 0.0
 Identities = 438/512 (85%), Positives = 458/512 (89%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDIL+IF+RLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGNA+ASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 120

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
            ASQATRKHGTDLWLDSC         KEEDFFASH SPE SG GWASA PE SSL  RNV
Sbjct: 121  ASQATRKHGTDLWLDSCVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNV 180

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKLANT 801
            +T PAN+EGG EQGPSVEGLN PTKAA EVSSIIKKKPNQA+RGLGAKKGSLGAQK+ NT
Sbjct: 181  ETTPANNEGGPEQGPSVEGLNAPTKAASEVSSIIKKKPNQAKRGLGAKKGSLGAQKVTNT 240

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKK 981
             FNEIEKQAQAVDKMKEQED LAR A KEESIVSSLRLAYKDLEIQMKK+EK+NMSG+KK
Sbjct: 241  CFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEKVNMSGKKK 300

Query: 982  VESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFTSTSRYFDE 1161
            +ESERLGMGFGNCRSGISHSVTSDMQTIEQETP+VAKPRKKYSDD+DDSYFTS+SRY DE
Sbjct: 301  IESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDDSYFTSSSRYLDE 360

Query: 1162 PMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQK 1341
            PME R             YWKKETIKDTD  LKTTGY+DR  ARRKPD+EPV++TDEAQK
Sbjct: 361  PMEFRSNSFSSWDDSSESYWKKETIKDTDTILKTTGYSDRSTARRKPDYEPVENTDEAQK 420

Query: 1342 KFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQTAGNYNLTSVL 1521
            KFGNVKAISSDMYFGRQAQADYETRARLER          DLF+EQRKQTAG+YNLTSVL
Sbjct: 421  KFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLFDEQRKQTAGSYNLTSVL 480

Query: 1522 PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQ 1617
            PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQ
Sbjct: 481  PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQ 512


>ref|XP_857414.1| PREDICTED: similar to ADP-ribosylation factor GTPase activating
            protein 3 isoform 5 [Canis familiaris].
          Length = 528

 Score =  870 bits (2247), Expect = 0.0
 Identities = 439/524 (83%), Positives = 459/524 (87%), Gaps = 11/524 (2%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDIL+IF+RLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGNA+ASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 120

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
            ASQATRKHGTDLWLDSC         KEEDFFASH SPE SG GWASA PE SSL  RNV
Sbjct: 121  ASQATRKHGTDLWLDSCVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNV 180

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKLANT 801
            +T PAN+EGG EQGPSVEGLN PTKAA EVSSIIKKKPNQA+RGLGAKKGSLGAQK+ NT
Sbjct: 181  ETTPANNEGGPEQGPSVEGLNAPTKAASEVSSIIKKKPNQAKRGLGAKKGSLGAQKVTNT 240

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKK 981
             FNEIEKQAQAVDKMKEQED LAR A KEESIVSSLRLAYKDLEIQMKK+EK+NMSG+KK
Sbjct: 241  CFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEKVNMSGKKK 300

Query: 982  VESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFTSTSR---- 1149
            +ESERLGMGFGNCRSGISHSVTSDMQTIEQETP+VAKPRKKYSDD+DDSYFTS+SR    
Sbjct: 301  IESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDDSYFTSSSRLFPW 360

Query: 1150 -------YFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDH 1308
                   Y DEPME R             YWKKETIKDTD  LKTTGY+DR  ARRKPD+
Sbjct: 361  SDAKSAKYLDEPMEFRSNSFSSWDDSSESYWKKETIKDTDTILKTTGYSDRSTARRKPDY 420

Query: 1309 EPVDDTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQ 1488
            EPV++TDEAQKKFGNVKAISSDMYFGRQAQADYETRARLER          DLF+EQRKQ
Sbjct: 421  EPVENTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLFDEQRKQ 480

Query: 1489 TAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            TAG+YNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD
Sbjct: 481  TAGSYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 524


>ref|XP_857369.1| PREDICTED: similar to ADP-ribosylation factor GTPase activating
            protein 3 isoform 4 [Canis familiaris].
          Length = 524

 Score =  869 bits (2246), Expect = 0.0
 Identities = 438/520 (84%), Positives = 458/520 (88%), Gaps = 7/520 (1%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDIL+IF+RLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGNA+ASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 120

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
            ASQATRKHGTDLWLDSC         KEEDFFASH SPE SG GWASA PE SSL  RNV
Sbjct: 121  ASQATRKHGTDLWLDSCVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNV 180

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKLANT 801
            +T PAN+EGG EQGPSVEGLN PTKAA EVSSIIKKKPNQA+RGLGAKKGSLGAQK+ NT
Sbjct: 181  ETTPANNEGGPEQGPSVEGLNAPTKAASEVSSIIKKKPNQAKRGLGAKKGSLGAQKVTNT 240

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKK 981
             FNEIEKQAQAVDKMKEQED LAR A KEESIVSSLRLAYKDLEIQMKK+EK+NMSG+KK
Sbjct: 241  CFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEKVNMSGKKK 300

Query: 982  VESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFTS------- 1140
            +ESERLGMGFGNCRSGISHSVTSDMQTIEQETP+VAKPRKKYSDD+DDSYFTS       
Sbjct: 301  IESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDDSYFTSSSSWSQG 360

Query: 1141 TSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD 1320
            +S Y DEPME R             YWKKETIKDTD  LKTTGY+DR  ARRKPD+EPV+
Sbjct: 361  SSEYLDEPMEFRSNSFSSWDDSSESYWKKETIKDTDTILKTTGYSDRSTARRKPDYEPVE 420

Query: 1321 DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQTAGN 1500
            +TDEAQKKFGNVKAISSDMYFGRQAQADYETRARLER          DLF+EQRKQTAG+
Sbjct: 421  NTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLFDEQRKQTAGS 480

Query: 1501 YNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            YNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD
Sbjct: 481  YNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 520


>ref|XP_857331.1| PREDICTED: similar to ADP-ribosylation factor GTPase-activating
            protein 3 (ARF GAP 3) isoform 3 [Canis familiaris].
          Length = 517

 Score =  867 bits (2241), Expect = 0.0
 Identities = 435/513 (84%), Positives = 456/513 (88%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDIL+IF+RLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGNA+ASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 120

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
            ASQATRKHGTDLWLDSC         KEEDFFASH SPE SG GWASA PE SSL  RNV
Sbjct: 121  ASQATRKHGTDLWLDSCVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNV 180

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKLANT 801
            +T PAN+EGG EQGPSVEGLN PTKAA EVSSIIKKKPNQA+RGLGAKKGSLGAQK+ NT
Sbjct: 181  ETTPANNEGGPEQGPSVEGLNAPTKAASEVSSIIKKKPNQAKRGLGAKKGSLGAQKVTNT 240

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKK 981
             FNEIEKQAQAVDKMKEQED LAR A KEESIVSSLRLAYKDLEIQMKK+EK+NMSG+KK
Sbjct: 241  CFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEKVNMSGKKK 300

Query: 982  VESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFTSTSRYFDE 1161
            +ESERLGMGFGNCRSGISHSVTSDMQTIEQETP+VAKPRKKYSDD+DDSYFTS+S  +  
Sbjct: 301  IESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDDSYFTSSSSCYYY 360

Query: 1162 PMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQK 1341
            PME R             YWKKETIKDTD  LKTTGY+DR  ARRKPD+EPV++TDEAQK
Sbjct: 361  PMEFRSNSFSSWDDSSESYWKKETIKDTDTILKTTGYSDRSTARRKPDYEPVENTDEAQK 420

Query: 1342 KFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQTAGNYNLTSVL 1521
            KFGNVKAISSDMYFGRQAQADYETRARLER          DLF+EQRKQTAG+YNLTSVL
Sbjct: 421  KFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLFDEQRKQTAGSYNLTSVL 480

Query: 1522 PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD
Sbjct: 481  PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 513


>ref|XP_540747.2| PREDICTED: similar to zinc finger protein 289, ID1 regulated isoform
            1 [Canis familiaris].
          Length = 520

 Score =  469 bits (1208), Expect = e-132
 Identities = 263/525 (50%), Positives = 350/525 (66%), Gaps = 14/525 (2%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +PSK +I T+FKRLR +PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4    EPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  +D N KYNSRAAQ+YRE+I+ L S
Sbjct: 64   RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQLGS 123

Query: 448  QATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVD 624
             A  +HGTDLW+D+          K++ DFF  H  P    P W    P+P+  T +   
Sbjct: 124  AALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQP----PAWKVQAPDPAE-TQQLTP 178

Query: 625  TPPANSEGGAEQGPSVEGLNVPTKAALE--VSSIIKKKPNQARRGLGAKKGSLGAQKLAN 798
            +   +S    E  P+++ L    KA+LE   S I KKKP  A++GLGAKKG LGAQK+++
Sbjct: 179  STEISSLAQPEHSPNMDLLGTSPKASLEPRTSLIGKKKPAAAKKGLGAKKG-LGAQKVSS 237

Query: 799  TSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MNMSG 972
             SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N+ G
Sbjct: 238  QSFSEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQNLEG 296

Query: 973  QKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTSTS 1146
            +K+ ++ERLGMG  + RS ISHSV S+MQ IEQETPV AK  +   D  DD  ++ +   
Sbjct: 297  KKREQAERLGMGLVS-RSSISHSVLSEMQVIEQETPVSAKSSRAQLDLFDDVGTFASGPP 355

Query: 1147 RYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD-- 1320
            +Y D P  L               W  + +++ +P  + T  + RP + R  +   V+  
Sbjct: 356  KYKDNPFSL--GESFSSRWDTDAAWGVDRMEEKEP--EVTISSIRPISERVTNRREVESR 411

Query: 1321 ----DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EEQRK 1485
                ++ EA++KF   KAISSDM+FGR+  A++E R+RL++          DLF +    
Sbjct: 412  NSGLESSEARQKFAGAKAISSDMFFGREVDAEHEARSRLQQLSGSSAISSSDLFGDVDGA 471

Query: 1486 QTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
               G+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 472  HGVGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 515


>ref|XP_861361.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated isoform
            7 [Canis familiaris].
          Length = 525

 Score =  467 bits (1202), Expect = e-131
 Identities = 263/529 (49%), Positives = 349/529 (65%), Gaps = 18/529 (3%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +PSK +I T+FKRLR +PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4    EPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  +D N KYNSRAAQ+YRE+I+ L S
Sbjct: 64   RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQLGS 123

Query: 448  QATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVD 624
             A  +HGTDLW+D+          K++ DFF  H  P    P W    P+P+        
Sbjct: 124  AALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQP----PAWKVQAPDPAETQQLTPS 179

Query: 625  TPPAN----SEGGAEQGPSVEGLNVPTKAALE--VSSIIKKKPNQARRGLGAKKGSLGAQ 786
            T  ++          QGP+++ L    KA+LE   S I KKKP  A++GLGAKKG LGAQ
Sbjct: 180  TEISSLAREFSPDFNQGPNMDLLGTSPKASLEPRTSLIGKKKPAAAKKGLGAKKG-LGAQ 238

Query: 787  KLANTSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--M 960
            K+++ SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   
Sbjct: 239  KVSSQSFSEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQ 297

Query: 961  NMSGQKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYF 1134
            N+ G+K+ ++ERLGMG  + RS ISHSV S+MQ IEQETPV AK  +   D  DD  ++ 
Sbjct: 298  NLEGKKREQAERLGMGLVS-RSSISHSVLSEMQVIEQETPVSAKSSRAQLDLFDDVGTFA 356

Query: 1135 TSTSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEP 1314
            +   +Y D P  L               W  + +++ +P  + T  + RP + R  +   
Sbjct: 357  SGPPKYKDNPFSL--GESFSSRWDTDAAWGVDRMEEKEP--EVTISSIRPISERVTNRRE 412

Query: 1315 VD------DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-E 1473
            V+      ++ EA++KF   KAISSDM+FGR+  A++E R+RL++          DLF +
Sbjct: 413  VESRNSGLESSEARQKFAGAKAISSDMFFGREVDAEHEARSRLQQLSGSSAISSSDLFGD 472

Query: 1474 EQRKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
                   G+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 473  VDGAHGVGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 520


>ref|XP_861391.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated isoform
            8 [Canis familiaris].
          Length = 534

 Score =  464 bits (1194), Expect = e-130
 Identities = 263/539 (48%), Positives = 350/539 (64%), Gaps = 28/539 (5%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +PSK +I T+FKRLR +PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4    EPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  +D N KYNSRAAQ+YRE+I+ L S
Sbjct: 64   RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQLGS 123

Query: 448  QATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVD 624
             A  +HGTDLW+D+          K++ DFF  H  P    P W    P+P+  T +   
Sbjct: 124  AALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQP----PAWKVQAPDPAE-TQQLTP 178

Query: 625  TPPANSEGGAEQGPSVEGLNVPTKAALE----------------VSSIIKKKPNQARRGL 756
            +   +S    E  P+++ L    KA+LE                 S I KKKP  A++GL
Sbjct: 179  STEISSLAQPEHSPNMDLLGTSPKASLESMYLSPKGALPAREPRTSLIGKKKPAAAKKGL 238

Query: 757  GAKKGSLGAQKLANTSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEI 936
            GAKKG LGAQK+++ SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I
Sbjct: 239  GAKKG-LGAQKVSSQSFSEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQI 296

Query: 937  QMKKEEK--MNMSGQKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYS 1110
              KKEEK   N+ G+K+ ++ERLGMG  + RS ISHSV S+MQ IEQETPV AK  +   
Sbjct: 297  DRKKEEKKLQNLEGKKREQAERLGMGLVS-RSSISHSVLSEMQVIEQETPVSAKSSRAQL 355

Query: 1111 DDNDD--SYFTSTSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRP 1284
            D  DD  ++ +   +Y D P  L               W  + +++ +P  + T  + RP
Sbjct: 356  DLFDDVGTFASGPPKYKDNPFSL--GESFSSRWDTDAAWGVDRMEEKEP--EVTISSIRP 411

Query: 1285 AARRKPDHEPVD------DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXX 1446
             + R  +   V+      ++ EA++KF   KAISSDM+FGR+  A++E R+RL++     
Sbjct: 412  ISERVTNRREVESRNSGLESSEARQKFAGAKAISSDMFFGREVDAEHEARSRLQQLSGSS 471

Query: 1447 XXXXXDLF-EEQRKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
                 DLF +       G+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 472  AISSSDLFGDVDGAHGVGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 529


>ref|XP_861332.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated isoform
            6 [Canis familiaris].
          Length = 522

 Score =  456 bits (1172), Expect = e-128
 Identities = 261/525 (49%), Positives = 349/525 (66%), Gaps = 14/525 (2%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +PSK +I T+FKRLR +PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4    EPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  +D N KYNSRAAQ+YRE+I+ L S
Sbjct: 64   RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQLGS 123

Query: 448  QATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVD 624
             A  +HGTDLW+D+          K++ DFF  H     +     S        TL  ++
Sbjct: 124  AALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQVTETQQLTPSTEISSLLCTL-YLN 182

Query: 625  TPPANSEGGAEQGPSVEGLNVPTKAALE--VSSIIKKKPNQARRGLGAKKGSLGAQKLAN 798
            +  A++E   E  P+++ L    KA+LE   S I KKKP  A++GLGAKKG LGAQK+++
Sbjct: 183  STIASTE--PEHSPNMDLLGTSPKASLEPRTSLIGKKKPAAAKKGLGAKKG-LGAQKVSS 239

Query: 799  TSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MNMSG 972
             SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N+ G
Sbjct: 240  QSFSEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQNLEG 298

Query: 973  QKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTSTS 1146
            +K+ ++ERLGMG  + RS ISHSV S+MQ IEQETPV AK  +   D  DD  ++ +   
Sbjct: 299  KKREQAERLGMGLVS-RSSISHSVLSEMQVIEQETPVSAKSSRAQLDLFDDVGTFASGPP 357

Query: 1147 RYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD-- 1320
            +Y D P  L               W  + +++ +P  + T  + RP + R  +   V+  
Sbjct: 358  KYKDNPFSL--GESFSSRWDTDAAWGVDRMEEKEP--EVTISSIRPISERVTNRREVESR 413

Query: 1321 ----DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EEQRK 1485
                ++ EA++KF   KAISSDM+FGR+  A++E R+RL++          DLF +    
Sbjct: 414  NSGLESSEARQKFAGAKAISSDMFFGREVDAEHEARSRLQQLSGSSAISSSDLFGDVDGA 473

Query: 1486 QTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
               G+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 474  HGVGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 517


>ref|XP_861308.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated
           isoform 5 [Canis familiaris].
          Length = 183

 Score =  241 bits (615), Expect = 2e-63
 Identities = 109/154 (70%), Positives = 126/154 (81%), Gaps = 1/154 (0%)
 Frame = +1

Query: 88  DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
           +PSK +I T+FKRLR +PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4   EPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268 RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
           RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  +D N KYNSRAAQ+YRE+I+ L S
Sbjct: 64  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQLGS 123

Query: 448 QATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASH 546
            A  +HGTDLW+D+          K++ DFF  H
Sbjct: 124 AALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEH 157


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.317    0.132    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 87,311,470
Number of extensions: 2672286
Number of successful extensions: 11918
Number of sequences better than 1.0e-05: 42
Number of HSP's gapped: 11836
Number of HSP's successfully gapped: 42
Length of query: 665
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 556
Effective length of database: 15,240,880
Effective search space: 8473929280
Effective search space used: 8473929280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007808
         (1995 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003126029.2| PREDICTED: ADP-ribosylation factor GTPase-ac...   774   0.0  
Alignment   gi|XP_003122862.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   477   e-135
Alignment   gi|XP_003361175.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   472   e-133
Alignment   gi|XP_003353922.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   303   3e-82
Alignment   gi|XP_003355371.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   187   1e-47
Alignment   gi|XP_003355370.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   134   2e-31
Alignment   gi|NP_001121936.1| stromal membrane-associated protein 2 [Sus s...    80   5e-15
Alignment   gi|XP_003121323.2| PREDICTED: stromal membrane-associated prote...    80   5e-15
Alignment   gi|XP_003360120.1| PREDICTED: arf-GAP with GTPase, ANK repeat a...    77   4e-14
Alignment   gi|XP_003127544.2| PREDICTED: arf-GAP with coiled-coil, ANK rep...    77   4e-14

>ref|XP_003126029.2| PREDICTED: ADP-ribosylation factor GTPase-activating protein 3-like
            isoform 2 [Sus scrofa].
          Length = 439

 Score =  774 bits (1998), Expect = 0.0
 Identities = 394/426 (92%), Positives = 394/426 (92%)
 Frame = +1

Query: 343  SSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSCXXXXXXXXXK 522
            SSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSC         K
Sbjct: 10   SSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSCVVPPSSPPPK 69

Query: 523  EEDFFASHASPEGSGPGWASAPPEPSSLTLRNVDTPPANSEGGAEQGPSVEGLNVPTKAA 702
            EEDFFASHASPEGS PGWASAPPEPSSLTLRNVDTPPANSEGGAEQGPSVEGLNVPTKAA
Sbjct: 70   EEDFFASHASPEGSVPGWASAPPEPSSLTLRNVDTPPANSEGGAEQGPSVEGLNVPTKAA 129

Query: 703  LEVSSIIKKKPNQARRGLGAKKGSLGAQKLANTSFNEIEKQAQAVDKMKEQEDLLARTAS 882
            LEVSSIIKKKPNQARRGLGAKKGSLGAQKLANTSFNEIEKQAQAVDKMKEQEDLLARTAS
Sbjct: 130  LEVSSIIKKKPNQARRGLGAKKGSLGAQKLANTSFNEIEKQAQAVDKMKEQEDLLARTAS 189

Query: 883  KEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKKVESERLGMGFGNCRSGISHSVTSDMQT 1062
            KEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKKVESERLGMGFGNCRSGISHSVTSDMQT
Sbjct: 190  KEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKKVESERLGMGFGNCRSGISHSVTSDMQT 249

Query: 1063 IEQETPVVAKPRKKYSDDNDDSYFTSTSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKD 1242
            IEQETPVVAKPRKKYSDDNDDSYFTSTSRYFDEPMELR             YWKKETIKD
Sbjct: 250  IEQETPVVAKPRKKYSDDNDDSYFTSTSRYFDEPMELRSSSFSSWDDSSDSYWKKETIKD 309

Query: 1243 TDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQKKFGNVKAISSDMYFGRQAQADYETRAR 1422
            TDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQKKFGNVKAISSDMYFGRQAQADYETRAR
Sbjct: 310  TDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQKKFGNVKAISSDMYFGRQAQADYETRAR 369

Query: 1423 LERFXXXXXXXXXDLFEEQRKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGV 1602
            LERF         DLFEEQRKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGV
Sbjct: 370  LERFSASSSISSADLFEEQRKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGV 429

Query: 1603 MTSIQD 1620
            MTSIQD
Sbjct: 430  MTSIQD 435


>ref|XP_003122862.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 2
            isoform 1 [Sus scrofa].
          Length = 520

 Score =  477 bits (1228), Expect = e-135
 Identities = 271/527 (51%), Positives = 357/527 (67%), Gaps = 16/527 (3%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +PSK +I T+FKRLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4    EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 64   RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 123

Query: 448  QATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVD 624
             A  +HGTDLW+D+          K++ DFF+ H  P    P W SAP    S T +   
Sbjct: 124  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAW-SAPATDLSETQQ--P 176

Query: 625  TPPANSEGGA--EQGPSVEGLNVPTKAALEV--SSIIKKKPNQARRGLGAKKGSLGAQKL 792
             P A S G A  E GP+++ L    KA+LE+  S I KKKP  A++GLGAKKG LGAQK+
Sbjct: 177  APSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIGKKKPAAAKKGLGAKKG-LGAQKV 235

Query: 793  ANTSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MNM 966
            ++ SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N+
Sbjct: 236  SSQSFSEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQNL 294

Query: 967  SGQKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTS 1140
             G+K+ ++ERLGMG  + RS +SHSV S+MQ IEQETPV AK  +   D  DD  ++ + 
Sbjct: 295  EGKKREQAERLGMGLVS-RSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASG 353

Query: 1141 TSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD 1320
              +Y D P  L               W  + +++ +P  + T  + RP + R  +   V+
Sbjct: 354  PPKYKDNPFSL--GESFGSRWDADAAWGMDRMEEKEP--EVTISSIRPISERVTNRREVE 409

Query: 1321 ------DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EEQ 1479
                  ++ EA++KF   KAISSDM+FGR+  ++YE R+RL++          DLF +  
Sbjct: 410  SRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFGDMD 469

Query: 1480 RKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
                AG+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 470  GAHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 515


>ref|XP_003361175.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 2-like
            [Sus scrofa].
          Length = 545

 Score =  472 bits (1215), Expect = e-133
 Identities = 268/527 (50%), Positives = 355/527 (67%), Gaps = 16/527 (3%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +PSK +I T+FKRLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 29   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 88

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 89   RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 148

Query: 448  QATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVD 624
             A  +HGTDLW+D+          K++ DFF+ H  P    P W SAP    S T +   
Sbjct: 149  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAW-SAPATDLSETQQ--P 201

Query: 625  TPPANSEGGA--EQGPSVE--GLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKL 792
             P A S G A  E GP+++  G +  +   L+ S I KKKP  A++GLGAKKG LGAQK+
Sbjct: 202  APSAESSGLAQPEHGPNMDLLGTSPLSHTELKTSLIGKKKPAAAKKGLGAKKG-LGAQKV 260

Query: 793  ANTSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MNM 966
            ++ SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N+
Sbjct: 261  SSQSFSEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQNL 319

Query: 967  SGQKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTS 1140
             G+K+ ++ERLGMG  + RS +SHSV S+MQ IEQETPV AK  +   D  DD  ++ + 
Sbjct: 320  EGKKREQAERLGMGLVS-RSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASG 378

Query: 1141 TSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD 1320
              +Y D P  L               W  + +++ +P  + T  + RP + R  +   V+
Sbjct: 379  PPKYKDNPFSL--GESFGSRWDADAAWGMDRMEEKEP--EVTISSIRPISERVTNRREVE 434

Query: 1321 ------DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EEQ 1479
                  ++ EA++KF   KAISSDM+FGR+  ++YE R+RL++          DLF +  
Sbjct: 435  SRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFGDMD 494

Query: 1480 RKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
                AG+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 495  GAHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 540


>ref|XP_003353922.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 2
            isoform 2 [Sus scrofa].
          Length = 414

 Score =  303 bits (775), Expect = 3e-82
 Identities = 196/450 (43%), Positives = 271/450 (60%), Gaps = 15/450 (3%)
 Frame = +1

Query: 316  MQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSCX 495
            MQVGGNA+A++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S A  +HGTD       
Sbjct: 1    MQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHGTD------- 53

Query: 496  XXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNVDTPPANSEGGA--EQGPS 669
                                    P W SAP    S T +    P A S G A  E GP+
Sbjct: 54   -----------------------PPAW-SAPATDLSETQQ--PAPSAESSGLAQPEHGPN 87

Query: 670  VEGLNVPTKAALEV--SSIIKKKPNQARRGLGAKKGSLGAQKLANTSFNEIEKQAQAVDK 843
            ++ L    KA+LE+  S I KKKP  A++GLGAKKG LGAQK+++ SF+EIE+QAQ  +K
Sbjct: 88   MDLLGTSPKASLELKTSLIGKKKPAAAKKGLGAKKG-LGAQKVSSQSFSEIERQAQVAEK 146

Query: 844  MKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MNMSGQKKVESERLGMGFGN 1017
            ++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N+ G+K+ ++ERLGMG  +
Sbjct: 147  LREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQAERLGMGLVS 205

Query: 1018 CRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTSTSRYFDEPMELRXXXXX 1191
             RS +SHSV S+MQ IEQETPV AK  +   D  DD  ++ +   +Y D P  L      
Sbjct: 206  -RSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDNPFSL--GESF 262

Query: 1192 XXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD------DTDEAQKKFGN 1353
                     W  + +++ +P  + T  + RP + R  +   V+      ++ EA++KF  
Sbjct: 263  GSRWDADAAWGMDRMEEKEP--EVTISSIRPISERVTNRREVESRSSGLESSEARQKFAG 320

Query: 1354 VKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EEQRKQTAGNYNLTSVLPTA 1530
             KAISSDM+FGR+  ++YE R+RL++          DLF +      AG+ +L +VLPTA
Sbjct: 321  AKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFGDMDGAHGAGSVSLGNVLPTA 380

Query: 1531 PDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
             D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 381  -DIAQFKQGVKSVAGKMAVLANGVMNSLQD 409


>ref|XP_003355371.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 3-like
           [Sus scrofa].
          Length = 93

 Score =  187 bits (476), Expect = 1e-47
 Identities = 87/88 (98%), Positives = 88/88 (100%)
 Frame = +1

Query: 82  MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
           MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262 FIRSTELDSNWSWFQLRCMQVGGNASAS 345
           FIRSTELDSNWSWFQLRCMQVGGNASA+
Sbjct: 61  FIRSTELDSNWSWFQLRCMQVGGNASAA 88


>ref|XP_003355370.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 3-like
           [Sus scrofa].
          Length = 146

 Score =  134 bits (337), Expect = 2e-31
 Identities = 69/96 (71%), Positives = 76/96 (79%), Gaps = 3/96 (3%)
 Frame = +1

Query: 343 SSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSCXXXXXXXXXK 522
           SSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSC         K
Sbjct: 35  SSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSCVVPPSSPPPK 94

Query: 523 EEDFFASHASPEGSG--PGWASAP-PEPSSLTLRNV 621
           EEDFFASHASPEG    P   ++P P  +S++ R++
Sbjct: 95  EEDFFASHASPEGPEGLPQLVTSPSPRRASVSSRDL 130


>ref|NP_001121936.1| stromal membrane-associated protein 2 [Sus scrofa].
          Length = 429

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = +1

Query: 145 NKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQV 324
           NK C DC +K P WAS   GVF+CI C+G HR+LGVH+S ++S  LD  W+  Q++CMQ 
Sbjct: 25  NKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD-QWTQEQIQCMQE 83

Query: 325 GGNASASSFFHQH 363
            GN  A+  +  +
Sbjct: 84  MGNGKANRLYEAY 96


>ref|XP_003121323.2| PREDICTED: stromal membrane-associated protein 1 [Sus scrofa].
          Length = 441

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  SKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRS 273
           ++Q  L + K LR    NK C DC AK P WAS   GVF+CI C+G HR+LGVH+S ++S
Sbjct: 14  NEQHQLILSKLLRE-EDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKS 72

Query: 274 TELDSNWSWFQLRCMQVGGNASA 342
             LD  W+  Q++CMQ  GN  A
Sbjct: 73  VNLD-QWTPEQIQCMQDMGNTKA 94


>ref|XP_003360120.1| PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing
           protein 3 [Sus scrofa].
          Length = 899

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 37/74 (50%), Positives = 47/74 (63%)
 Frame = +1

Query: 127 LRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQ 306
           +R+V  N  C DC A NP WAS+  G  +CI+CSG+HR LG HLS +RS +LD +W    
Sbjct: 656 VRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSGTHRHLGAHLSRVRSLDLD-DWPPEL 714

Query: 307 LRCMQVGGNASASS 348
           L  M   GNA A+S
Sbjct: 715 LAVMTAMGNALANS 728


>ref|XP_003127544.2| PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH
           domain-containing protein 3 [Sus scrofa].
          Length = 865

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 38/81 (46%), Positives = 51/81 (62%)
 Frame = +1

Query: 112 TIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSN 291
           ++ +R++ V  N  C DCG  +P WASI  GV LCI+CSG HRSLGVH S +RS  LDS 
Sbjct: 436 SVLQRVQGVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDS- 494

Query: 292 WSWFQLRCMQVGGNASASSFF 354
           W    L+ M   GN++ +  +
Sbjct: 495 WEPELLKLMCELGNSTMNQIY 515


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.317    0.132    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 53,956,562
Number of extensions: 1667058
Number of successful extensions: 7779
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 7692
Number of HSP's successfully gapped: 25
Length of query: 665
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 560
Effective length of database: 8,729,747
Effective search space: 4888658320
Effective search space used: 4888658320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007808
         (1995 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_079721.2| ADP-ribosylation factor GTPase-activating prote...   786   0.0  
Alignment   gi|NP_076343.2| ADP-ribosylation factor GTPase-activating prote...   470   e-132
Alignment   gi|NP_001159496.1| ADP-ribosylation factor GTPase-activating pr...   463   e-130
Alignment   gi|XP_003086028.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   437   e-122
Alignment   gi|NP_001171180.1| ADP-ribosylation factor GTPase-activating pr...   108   2e-23
Alignment   gi|NP_001171179.1| ADP-ribosylation factor GTPase-activating pr...   108   2e-23
Alignment   gi|NP_001171178.1| ADP-ribosylation factor GTPase-activating pr...   108   2e-23
Alignment   gi|NP_001171177.1| ADP-ribosylation factor GTPase-activating pr...   108   2e-23
Alignment   gi|NP_665703.2| ADP-ribosylation factor GTPase-activating prote...   108   2e-23
Alignment   gi|NP_082810.1| stromal membrane-associated protein 1 [Mus musc...    80   8e-15

>ref|NP_079721.2| ADP-ribosylation factor GTPase-activating protein 3 [Mus musculus].
          Length = 524

 Score =  786 bits (2031), Expect = 0.0
 Identities = 397/521 (76%), Positives = 439/521 (84%), Gaps = 8/521 (1%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDIL IFKRLRSVPTNKVCFDCGAKNPSWASI+YGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILAIFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGN++ASSFFHQHGCAT DTNAKYNSRAAQLYRE+IK+L
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNSNASSFFHQHGCATKDTNAKYNSRAAQLYREKIKTL 120

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
            A+QATR+HGTDLWLDSC         KEEDFFASHAS E SG   ASA PE +S T   +
Sbjct: 121  ATQATRRHGTDLWLDSCAAPPVSPPPKEEDFFASHASLEVSGAMQASAQPESASSTPWGL 180

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKLANT 801
            +T P   EGG  QGPSVEGLN P KAA EVSSIIKKKPNQA++GLGAKKGSLGAQKL NT
Sbjct: 181  ETTPEKHEGGPGQGPSVEGLNTPGKAAPEVSSIIKKKPNQAKKGLGAKKGSLGAQKLTNT 240

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKK 981
            SF EIEKQAQAVDK KEQED LAR A KEESIVSSLRLAYKDLEI  KK+E++N+SGQKK
Sbjct: 241  SFTEIEKQAQAVDKRKEQED-LARGAPKEESIVSSLRLAYKDLEISRKKDERLNLSGQKK 299

Query: 982  VESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFT-------- 1137
            VE+ERLGMGFG+CRSGISHSVTSDMQTIEQE+P +AKPR+KY +D +DSYF+        
Sbjct: 300  VEAERLGMGFGSCRSGISHSVTSDMQTIEQESPTLAKPRRKYQEDPEDSYFSSSSKWSEQ 359

Query: 1138 STSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPV 1317
            S+SRYFD+PMELR             YWKK++ +D +P +++TG +DRP+ARRKP++EP+
Sbjct: 360  SSSRYFDDPMELRSSSFSSWDDGADSYWKKDSSRDPEPAMRSTGSSDRPSARRKPEYEPI 419

Query: 1318 DDTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQTAG 1497
              TDEAQKKFGNVKAISSDMYFG QAQ D+ETRARLER          DLF+EQRKQTAG
Sbjct: 420  GSTDEAQKKFGNVKAISSDMYFGIQAQTDFETRARLERLSTSSSISSADLFDEQRKQTAG 479

Query: 1498 NYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            NYNL++VLP APDMAQFKQGVRSVAGKLSVFANGVMTSIQD
Sbjct: 480  NYNLSNVLPNAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 520


>ref|NP_076343.2| ADP-ribosylation factor GTPase-activating protein 2 isoform 2 [Mus
            musculus].
          Length = 520

 Score =  470 bits (1210), Expect = e-132
 Identities = 264/522 (50%), Positives = 348/522 (66%), Gaps = 12/522 (2%)
 Frame = +1

Query: 91   PSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIR 270
            PSK +I TIFKRLR++PTNK CFDCGAK+PSWASITYGVFLCIDCSG HRSLGVHLSFIR
Sbjct: 5    PSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIR 64

Query: 271  STELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQ 450
            STELDSNWSW QLRCMQVGGNA+A++FF QHGC  ND N KY SRAAQ+YRE+I+ L S 
Sbjct: 65   STELDSNWSWLQLRCMQVGGNANATAFFRQHGCMANDANTKYTSRAAQMYREKIRQLGSA 124

Query: 451  ATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVDT 627
            A  +HGTDLW+DS          K++ DFF  H       P W +A  +PS  T +    
Sbjct: 125  ALTRHGTDLWIDSMNSAPSHSPEKKDSDFFTEHT----QAPAWDTAATDPSG-TQQPALP 179

Query: 628  PPANSEGGAEQGPSVEGLNVPTKAALEVSSII--KKKPNQARRGLGAKKGSLGAQKLANT 801
              ++S    EQGP+ + L    +A+LE+ S I  KKKP  A++GLGAKKG LGAQK++N 
Sbjct: 180  SESSSLAQPEQGPNTDLLGTSPQASLELKSSIIGKKKPAAAKKGLGAKKG-LGAQKVSNQ 238

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MNMSGQ 975
            SF EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N+ G+
Sbjct: 239  SFTEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQNLEGK 297

Query: 976  KKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTSTSR 1149
            K+ ++ERLGMG  + RS ISHSV S+MQ IEQETP+ AK  +   D  DD  ++ +   +
Sbjct: 298  KREQAERLGMGLVS-RSSISHSVLSEMQMIEQETPLSAKSSRSQLDLFDDVGTFASGPPK 356

Query: 1150 YFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTG---YTDRPAARRKPDHEPVD 1320
            Y D P  L               W  + +++ +P +  +     ++R A+RR+ +     
Sbjct: 357  YKDNPFSL--GETFGSRWDSDAAWGMDRVEEKEPEVTISSIRPISERTASRREVETRSSG 414

Query: 1321 -DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EEQRKQTA 1494
             ++ EA++KF   KAISSDM+FGR+  ++YE R+RL++          DLF         
Sbjct: 415  LESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFGNMDGAHGG 474

Query: 1495 GNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            G  +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 475  GTVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 515


>ref|NP_001159496.1| ADP-ribosylation factor GTPase-activating protein 2 isoform 1 [Mus
            musculus].
          Length = 534

 Score =  463 bits (1192), Expect = e-130
 Identities = 266/536 (49%), Positives = 349/536 (65%), Gaps = 26/536 (4%)
 Frame = +1

Query: 91   PSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIR 270
            PSK +I TIFKRLR++PTNK CFDCGAK+PSWASITYGVFLCIDCSG HRSLGVHLSFIR
Sbjct: 5    PSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIR 64

Query: 271  STELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQ 450
            STELDSNWSW QLRCMQVGGNA+A++FF QHGC  ND N KY SRAAQ+YRE+I+ L S 
Sbjct: 65   STELDSNWSWLQLRCMQVGGNANATAFFRQHGCMANDANTKYTSRAAQMYREKIRQLGSA 124

Query: 451  ATRKHGTDLWLDSCXXXXXXXXXKEE-DFFASHASPEGSGPGWASAPPEPSSLTLRNVDT 627
            A  +HGTDLW+DS          K++ DFF  H       P W +A  +PS  T +    
Sbjct: 125  ALTRHGTDLWIDSMNSAPSHSPEKKDSDFFTEHT----QAPAWDTAATDPSG-TQQPALP 179

Query: 628  PPANSEGGAEQGPSVEGLNVPTKAALE---------------VSSII-KKKPNQARRGLG 759
              ++S    EQGP+ + L    +A+LE                SSII KKKP  A++GLG
Sbjct: 180  SESSSLAQPEQGPNTDLLGTSPQASLESMYLSAKGPSCTRELKSSIIGKKKPAAAKKGLG 239

Query: 760  AKKGSLGAQKLANTSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQ 939
            AKKG LGAQK++N SF EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I 
Sbjct: 240  AKKG-LGAQKVSNQSFTEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQID 297

Query: 940  MKKEEK--MNMSGQKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSD 1113
             KKEEK   N+ G+K+ ++ERLGMG  + RS ISHSV S+MQ IEQETP+ AK  +   D
Sbjct: 298  RKKEEKKLQNLEGKKREQAERLGMGLVS-RSSISHSVLSEMQMIEQETPLSAKSSRSQLD 356

Query: 1114 DNDD--SYFTSTSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTG---YTD 1278
              DD  ++ +   +Y D P  L               W  + +++ +P +  +     ++
Sbjct: 357  LFDDVGTFASGPPKYKDNPFSL--GETFGSRWDSDAAWGMDRVEEKEPEVTISSIRPISE 414

Query: 1279 RPAARRKPDHEPVD-DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXX 1455
            R A+RR+ +      ++ EA++KF   KAISSDM+FGR+  ++YE R+RL++        
Sbjct: 415  RTASRREVETRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAIS 474

Query: 1456 XXDLF-EEQRKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
              DLF         G  +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 475  SSDLFGNMDGAHGGGTVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 529


>ref|XP_003086028.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 3-like
           [Mus musculus].
          Length = 389

 Score =  437 bits (1125), Expect = e-122
 Identities = 224/278 (80%), Positives = 238/278 (85%), Gaps = 1/278 (0%)
 Frame = +1

Query: 82  MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
           MGDPSKQDIL IFKRLRSVPTNKVCFDCGAKNPSWASI+YGVFLCIDCSGSHRSLGVHLS
Sbjct: 1   MGDPSKQDILAIFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLS 60

Query: 262 FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
           FIRSTELDSNWSWFQLRCMQVGGN++ASSFFHQHGCAT DTNAKYNSRAAQLYRE+IK+L
Sbjct: 61  FIRSTELDSNWSWFQLRCMQVGGNSNASSFFHQHGCATKDTNAKYNSRAAQLYREKIKTL 120

Query: 442 ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
           A+QATR+HGTDLWLDSC         KEEDFFASHAS E SG   ASA PE +S T   +
Sbjct: 121 ATQATRRHGTDLWLDSCAAPPVSPPPKEEDFFASHASLEVSGAMQASAQPESASSTPWGL 180

Query: 622 DTPPANSEGGAEQGPSVEGLNVPTKAA-LEVSSIIKKKPNQARRGLGAKKGSLGAQKLAN 798
           +T P   EGG  QGPSVEGLN P KAA  EVSSIIKKKPNQA++GLGAKKGSLGAQKL N
Sbjct: 181 ETTPEKHEGGPGQGPSVEGLNTPGKAAPAEVSSIIKKKPNQAKKGLGAKKGSLGAQKLTN 240

Query: 799 TSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLR 912
           TSF EIEKQAQAVDK KEQED LAR A KEES+ S+ R
Sbjct: 241 TSFTEIEKQAQAVDKRKEQED-LARGAPKEESMPSARR 277



 Score =  181 bits (459), Expect = 2e-45
 Identities = 90/113 (79%), Positives = 98/113 (86%)
 Frame = +1

Query: 1282 PAARRKPDHEPVDDTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXX 1461
            P+ARRKP++EP+  TDEAQKKFGNVKAISSDMYFG QAQ D+ETRARLER          
Sbjct: 273  PSARRKPEYEPIGSTDEAQKKFGNVKAISSDMYFGIQAQTDFETRARLERLSTSSSISSA 332

Query: 1462 DLFEEQRKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            DLF+EQRKQTAGNYNL++VLP APDMAQFKQGVRSVAGKLSVFANGVMTSIQD
Sbjct: 333  DLFDEQRKQTAGNYNLSNVLPNAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 385


>ref|NP_001171180.1| ADP-ribosylation factor GTPase-activating protein 1 isoform b [Mus
           musculus].
          Length = 392

 Score =  108 bits (269), Expect = 2e-23
 Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = +1

Query: 115 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNW 294
           + K +R+   N VCF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 295 SWFQLRCMQVGGNASASSFF-----HQHGCATNDTNAKYNSRAAQLYRERIKSLA 444
              +L  M+ GGNA    F      ++   +  D   KY+SRAA L+R+++ +LA
Sbjct: 68  KDIELEKMKAGGNAKFREFLETQDDYEPSWSLQD---KYSSRAAALFRDKVATLA 119


>ref|NP_001171179.1| ADP-ribosylation factor GTPase-activating protein 1 isoform c [Mus
           musculus].
          Length = 394

 Score =  108 bits (269), Expect = 2e-23
 Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = +1

Query: 115 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNW 294
           + K +R+   N VCF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 295 SWFQLRCMQVGGNASASSFF-----HQHGCATNDTNAKYNSRAAQLYRERIKSLA 444
              +L  M+ GGNA    F      ++   +  D   KY+SRAA L+R+++ +LA
Sbjct: 68  KDIELEKMKAGGNAKFREFLETQDDYEPSWSLQD---KYSSRAAALFRDKVATLA 119


>ref|NP_001171178.1| ADP-ribosylation factor GTPase-activating protein 1 isoform c [Mus
           musculus].
          Length = 394

 Score =  108 bits (269), Expect = 2e-23
 Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = +1

Query: 115 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNW 294
           + K +R+   N VCF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 295 SWFQLRCMQVGGNASASSFF-----HQHGCATNDTNAKYNSRAAQLYRERIKSLA 444
              +L  M+ GGNA    F      ++   +  D   KY+SRAA L+R+++ +LA
Sbjct: 68  KDIELEKMKAGGNAKFREFLETQDDYEPSWSLQD---KYSSRAAALFRDKVATLA 119


>ref|NP_001171177.1| ADP-ribosylation factor GTPase-activating protein 1 isoform b [Mus
           musculus].
          Length = 392

 Score =  108 bits (269), Expect = 2e-23
 Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = +1

Query: 115 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNW 294
           + K +R+   N VCF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 295 SWFQLRCMQVGGNASASSFF-----HQHGCATNDTNAKYNSRAAQLYRERIKSLA 444
              +L  M+ GGNA    F      ++   +  D   KY+SRAA L+R+++ +LA
Sbjct: 68  KDIELEKMKAGGNAKFREFLETQDDYEPSWSLQD---KYSSRAAALFRDKVATLA 119


>ref|NP_665703.2| ADP-ribosylation factor GTPase-activating protein 1 isoform a [Mus
           musculus].
          Length = 414

 Score =  108 bits (269), Expect = 2e-23
 Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = +1

Query: 115 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNW 294
           + K +R+   N VCF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 295 SWFQLRCMQVGGNASASSFF-----HQHGCATNDTNAKYNSRAAQLYRERIKSLA 444
              +L  M+ GGNA    F      ++   +  D   KY+SRAA L+R+++ +LA
Sbjct: 68  KDIELEKMKAGGNAKFREFLETQDDYEPSWSLQD---KYSSRAAALFRDKVATLA 119


>ref|NP_082810.1| stromal membrane-associated protein 1 [Mus musculus].
          Length = 440

 Score = 79.7 bits (195), Expect = 8e-15
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  SKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRS 273
           ++Q  L + K LR    NK C DC AK P WAS   GVF+CI C+G HR+LGVH+S ++S
Sbjct: 14  NEQHQLILSKLLRE-EDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKS 72

Query: 274 TELDSNWSWFQLRCMQVGGNASA 342
             LD  W+  Q++CMQ  GN  A
Sbjct: 73  VNLD-QWTPEQIQCMQDMGNTKA 94


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.317    0.132    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 71,956,831
Number of extensions: 2137924
Number of successful extensions: 8971
Number of sequences better than 1.0e-05: 36
Number of HSP's gapped: 8901
Number of HSP's successfully gapped: 37
Length of query: 665
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 557
Effective length of database: 12,373,671
Effective search space: 6892134747
Effective search space used: 6892134747
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007808
         (1995 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_055385.3| ADP-ribosylation factor GTPase-activating prote...   845   0.0  
Alignment   gi|NP_001135765.1| ADP-ribosylation factor GTPase-activating pr...   736   0.0  
Alignment   gi|NP_115765.2| ADP-ribosylation factor GTPase-activating prote...   480   e-135
Alignment   gi|NP_001229761.1| ADP-ribosylation factor GTPase-activating pr...   452   e-127
Alignment   gi|NP_783202.1| ADP-ribosylation factor GTPase-activating prote...   108   2e-23
Alignment   gi|NP_060679.1| ADP-ribosylation factor GTPase-activating prote...   108   2e-23
Alignment   gi|NP_001037770.1| stromal membrane-associated protein 1 isofor...    80   7e-15
Alignment   gi|NP_068759.2| stromal membrane-associated protein 1 isoform B...    80   7e-15
Alignment   gi|NP_073570.1| stromal membrane-associated protein 2 isoform 1...    80   9e-15
Alignment   gi|NP_085152.2| arf-GAP with coiled-coil, ANK repeat and PH dom...    79   2e-14

>ref|NP_055385.3| ADP-ribosylation factor GTPase-activating protein 3 isoform 1 [Homo
            sapiens].
          Length = 516

 Score =  845 bits (2182), Expect = 0.0
 Identities = 424/513 (82%), Positives = 452/513 (88%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGC+TNDTNAKYNSRAAQLYRE+IKSL
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCSTNDTNAKYNSRAAQLYREKIKSL 120

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
            ASQATRKHGTDLWLDSC         KEEDFFASH SPE S   WASA  EPSSLT R V
Sbjct: 121  ASQATRKHGTDLWLDSCVVPPLSPPPKEEDFFASHVSPEVSDTAWASAIAEPSSLTSRPV 180

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKLANT 801
            +T   N+EGG EQGPSVEGLNVPTKA LEVSSIIKKKPNQA++GLGAKKGSLGAQKLANT
Sbjct: 181  ETTLENNEGGQEQGPSVEGLNVPTKATLEVSSIIKKKPNQAKKGLGAKKGSLGAQKLANT 240

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKK 981
             FNEIEKQAQA DKMKEQED LA+  SKEESIVSSLRLAYKDLEIQMKK+EKMN+SG+K 
Sbjct: 241  CFNEIEKQAQAADKMKEQED-LAKVVSKEESIVSSLRLAYKDLEIQMKKDEKMNISGKKN 299

Query: 982  VESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFTSTSRYFDE 1161
            V+S+RLGMGFGNCRS ISHSVTSDMQTIEQE+P++AKPRKKY+DD+DDSYFTS+S YFDE
Sbjct: 300  VDSDRLGMGFGNCRSVISHSVTSDMQTIEQESPIMAKPRKKYNDDSDDSYFTSSSSYFDE 359

Query: 1162 PMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQK 1341
            P+ELR             YWKKET KDT+  LKTTGY+DRP ARRKPD+EPV++TDEAQK
Sbjct: 360  PVELRSSSFSSWDDSSDSYWKKETSKDTETVLKTTGYSDRPTARRKPDYEPVENTDEAQK 419

Query: 1342 KFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQTAGNYNLTSVL 1521
            KFGNVKAISSDMYFGRQ+QADYETRARLER          DLFEE RKQ AGNY+L+SVL
Sbjct: 420  KFGNVKAISSDMYFGRQSQADYETRARLERLSASSSISSADLFEEPRKQPAGNYSLSSVL 479

Query: 1522 PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            P APDMAQFKQGVRSVAGKLSVFANGV+TSIQD
Sbjct: 480  PNAPDMAQFKQGVRSVAGKLSVFANGVVTSIQD 512


>ref|NP_001135765.1| ADP-ribosylation factor GTPase-activating protein 3 isoform 2 [Homo
            sapiens].
          Length = 472

 Score =  736 bits (1901), Expect = 0.0
 Identities = 382/513 (74%), Positives = 408/513 (79%)
 Frame = +1

Query: 82   MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 261
            MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS
Sbjct: 1    MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLS 60

Query: 262  FIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSL 441
            FIRSTELDSNWSWFQLRCMQVGGNASA                                 
Sbjct: 61   FIRSTELDSNWSWFQLRCMQVGGNASA--------------------------------- 87

Query: 442  ASQATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
                       LWLDSC         KEEDFFASH SPE S   WASA  EPSSLT R V
Sbjct: 88   -----------LWLDSCVVPPLSPPPKEEDFFASHVSPEVSDTAWASAIAEPSSLTSRPV 136

Query: 622  DTPPANSEGGAEQGPSVEGLNVPTKAALEVSSIIKKKPNQARRGLGAKKGSLGAQKLANT 801
            +T   N+EGG EQGPSVEGLNVPTKA LEVSSIIKKKPNQA++GLGAKKGSLGAQKLANT
Sbjct: 137  ETTLENNEGGQEQGPSVEGLNVPTKATLEVSSIIKKKPNQAKKGLGAKKGSLGAQKLANT 196

Query: 802  SFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEKMNMSGQKK 981
             FNEIEKQAQA DKMKEQEDL A+  SKEESIVSSLRLAYKDLEIQMKK+EKMN+SG+K 
Sbjct: 197  CFNEIEKQAQAADKMKEQEDL-AKVVSKEESIVSSLRLAYKDLEIQMKKDEKMNISGKKN 255

Query: 982  VESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDDSYFTSTSRYFDE 1161
            V+S+RLGMGFGNCRS ISHSVTSDMQTIEQE+P++AKPRKKY+DD+DDSYFTS+S YFDE
Sbjct: 256  VDSDRLGMGFGNCRSVISHSVTSDMQTIEQESPIMAKPRKKYNDDSDDSYFTSSSSYFDE 315

Query: 1162 PMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVDDTDEAQK 1341
            P+ELR             YWKKET KDT+  LKTTGY+DRP ARRKPD+EPV++TDEAQK
Sbjct: 316  PVELRSSSFSSWDDSSDSYWKKETSKDTETVLKTTGYSDRPTARRKPDYEPVENTDEAQK 375

Query: 1342 KFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLFEEQRKQTAGNYNLTSVL 1521
            KFGNVKAISSDMYFGRQ+QADYETRARLER          DLFEE RKQ AGNY+L+SVL
Sbjct: 376  KFGNVKAISSDMYFGRQSQADYETRARLERLSASSSISSADLFEEPRKQPAGNYSLSSVL 435

Query: 1522 PTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
            P APDMAQFKQGVRSVAGKLSVFANGV+TSIQD
Sbjct: 436  PNAPDMAQFKQGVRSVAGKLSVFANGVVTSIQD 468


>ref|NP_115765.2| ADP-ribosylation factor GTPase-activating protein 2 isoform 1 [Homo
            sapiens].
          Length = 521

 Score =  480 bits (1236), Expect = e-135
 Identities = 270/528 (51%), Positives = 351/528 (66%), Gaps = 17/528 (3%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +P+K +I T+FKRLR+VPTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4    EPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 64   RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 123

Query: 448  QATRKHGTDLWLD--SCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNV 621
             A  +HGTDLW+D  S          K+ DFF  H  P    P W +   EPS       
Sbjct: 124  AALARHGTDLWIDNMSSAVPNHSPEKKDSDFFTEHTQP----PAWDAPATEPSG---TQQ 176

Query: 622  DTPPANSEGGA--EQGPSVEGLNVPTKAALEVSSII--KKKPNQARRGLGAKKGSLGAQK 789
              P   S G A  E GP+ + L    KA+LE+ S I  KKKP  A++GLGAKKG LGAQK
Sbjct: 177  PAPSTESSGLAQPEHGPNTDLLGTSPKASLELKSSIIGKKKPAAAKKGLGAKKG-LGAQK 235

Query: 790  LANTSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MN 963
            +++ SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N
Sbjct: 236  VSSQSFSEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQN 294

Query: 964  MSGQKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFT 1137
            + G+K+ ++ERLGMG  + RS +SHSV S+MQ IEQETPV AK  +   D  DD  ++ +
Sbjct: 295  LEGKKREQAERLGMGLVS-RSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFAS 353

Query: 1138 STSRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPV 1317
               +Y D P  L               W  + +++ +P  + T  + RP + R  +   V
Sbjct: 354  GPPKYKDNPFSL--GESFGSRWDTDAAWGMDRVEEKEP--EVTISSIRPISERATNRREV 409

Query: 1318 D------DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EE 1476
            +      ++ EA++KF   KAISSDM+FGR+  A+YE R+RL++          DLF + 
Sbjct: 410  ESRSSGLESSEARQKFAGAKAISSDMFFGREVDAEYEARSRLQQLSGSSAISSSDLFGDM 469

Query: 1477 QRKQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
                 AG+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 470  DGAHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 516


>ref|NP_001229761.1| ADP-ribosylation factor GTPase-activating protein 2 isoform 2 [Homo
            sapiens].
          Length = 493

 Score =  452 bits (1164), Expect = e-127
 Identities = 260/526 (49%), Positives = 339/526 (64%), Gaps = 15/526 (2%)
 Frame = +1

Query: 88   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 267
            +P+K +I T+FKRLR+VPTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 4    EPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 63

Query: 268  RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 447
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 64   RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 123

Query: 448  QATRKHGTDLWLDSCXXXXXXXXXKEEDFFASHASPEGSGPGWASAPPEPSSLTLRNVDT 627
             A  +HGTD                               P W +   EPS         
Sbjct: 124  AALARHGTD------------------------------PPAWDAPATEPSG---TQQPA 150

Query: 628  PPANSEGGA--EQGPSVEGLNVPTKAALEVSSII--KKKPNQARRGLGAKKGSLGAQKLA 795
            P   S G A  E GP+ + L    KA+LE+ S I  KKKP  A++GLGAKKG LGAQK++
Sbjct: 151  PSTESSGLAQPEHGPNTDLLGTSPKASLELKSSIIGKKKPAAAKKGLGAKKG-LGAQKVS 209

Query: 796  NTSFNEIEKQAQAVDKMKEQEDLLARTASKEESIVSSLRLAYKDLEIQMKKEEK--MNMS 969
            + SF+EIE+QAQ  +K++EQ+   A+  + EES+V+S+RLAY++L+I  KKEEK   N+ 
Sbjct: 210  SQSFSEIERQAQVAEKLREQQAADAKKQA-EESMVASMRLAYQELQIDRKKEEKKLQNLE 268

Query: 970  GQKKVESERLGMGFGNCRSGISHSVTSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTST 1143
            G+K+ ++ERLGMG  + RS +SHSV S+MQ IEQETPV AK  +   D  DD  ++ +  
Sbjct: 269  GKKREQAERLGMGLVS-RSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGP 327

Query: 1144 SRYFDEPMELRXXXXXXXXXXXXXYWKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD- 1320
             +Y D P  L               W  + +++ +P  + T  + RP + R  +   V+ 
Sbjct: 328  PKYKDNPFSL--GESFGSRWDTDAAWGMDRVEEKEP--EVTISSIRPISERATNRREVES 383

Query: 1321 -----DTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERFXXXXXXXXXDLF-EEQR 1482
                 ++ EA++KF   KAISSDM+FGR+  A+YE R+RL++          DLF +   
Sbjct: 384  RSSGLESSEARQKFAGAKAISSDMFFGREVDAEYEARSRLQQLSGSSAISSSDLFGDMDG 443

Query: 1483 KQTAGNYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQD 1620
               AG+ +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QD
Sbjct: 444  AHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQD 488


>ref|NP_783202.1| ADP-ribosylation factor GTPase-activating protein 1 isoform b [Homo
           sapiens].
          Length = 414

 Score =  108 bits (269), Expect = 2e-23
 Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
 Frame = +1

Query: 115 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNW 294
           + K +R    N VCF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 295 SWFQLRCMQVGGNASASSFFHQHGCATN--DTNAKYNSRAAQLYRERIKSLA 444
              +L  M+ GGNA    F               KYNSRAA L+R+++ +LA
Sbjct: 68  KDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALA 119


>ref|NP_060679.1| ADP-ribosylation factor GTPase-activating protein 1 isoform a [Homo
           sapiens].
          Length = 406

 Score =  108 bits (269), Expect = 2e-23
 Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
 Frame = +1

Query: 115 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNW 294
           + K +R    N VCF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 295 SWFQLRCMQVGGNASASSFFHQHGCATN--DTNAKYNSRAAQLYRERIKSLA 444
              +L  M+ GGNA    F               KYNSRAA L+R+++ +LA
Sbjct: 68  KDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALA 119


>ref|NP_001037770.1| stromal membrane-associated protein 1 isoform A [Homo sapiens].
          Length = 467

 Score = 80.1 bits (196), Expect = 7e-15
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  SKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRS 273
           ++Q  L + K LR    NK C DC AK P WAS   GVF+CI C+G HR+LGVH+S ++S
Sbjct: 14  NEQHQLILSKLLRE-EDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKS 72

Query: 274 TELDSNWSWFQLRCMQVGGNASA 342
             LD  W+  Q++CMQ  GN  A
Sbjct: 73  VNLD-QWTAEQIQCMQDMGNTKA 94


>ref|NP_068759.2| stromal membrane-associated protein 1 isoform B [Homo sapiens].
          Length = 440

 Score = 80.1 bits (196), Expect = 7e-15
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  SKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRS 273
           ++Q  L + K LR    NK C DC AK P WAS   GVF+CI C+G HR+LGVH+S ++S
Sbjct: 14  NEQHQLILSKLLRE-EDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKS 72

Query: 274 TELDSNWSWFQLRCMQVGGNASA 342
             LD  W+  Q++CMQ  GN  A
Sbjct: 73  VNLD-QWTAEQIQCMQDMGNTKA 94


>ref|NP_073570.1| stromal membrane-associated protein 2 isoform 1 [Homo sapiens].
          Length = 429

 Score = 79.7 bits (195), Expect = 9e-15
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = +1

Query: 145 NKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQV 324
           NK C DC +K P WAS   GVF+CI C+G HR+LGVH+S ++S  LD  W+  Q++CMQ 
Sbjct: 25  NKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD-QWTQEQIQCMQE 83

Query: 325 GGNASASSFFHQH 363
            GN  A+  +  +
Sbjct: 84  MGNGKANRLYEAY 96


>ref|NP_085152.2| arf-GAP with coiled-coil, ANK repeat and PH domain-containing
           protein 3 [Homo sapiens].
          Length = 834

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 39/81 (48%), Positives = 52/81 (64%)
 Frame = +1

Query: 112 TIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSN 291
           ++ +R++SV  N  C DCG  +P WASI  GV LCI+CSG HRSLGVH S +RS  LDS 
Sbjct: 404 SVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDS- 462

Query: 292 WSWFQLRCMQVGGNASASSFF 354
           W    L+ M   GN++ +  +
Sbjct: 463 WEPELLKLMCELGNSAVNQIY 483


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.317    0.132    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 85,294,604
Number of extensions: 2590838
Number of successful extensions: 11367
Number of sequences better than 1.0e-05: 47
Number of HSP's gapped: 11296
Number of HSP's successfully gapped: 48
Length of query: 665
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 556
Effective length of database: 14,704,088
Effective search space: 8175472928
Effective search space used: 8175472928
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-007808
         (1995 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr05                                                         722   0.0  

>Sscrofa_Chr05 
||          Length = 111506441

 Score =  722 bits (364), Expect = 0.0
 Identities = 364/364 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1616    aggatcgctacggttcttaagcccgacggcccggagcgcggcgcccgcaagatgggagaa 1675
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3496953 aggatcgctacggttcttaagcccgacggcccggagcgcggcgcccgcaagatgggagaa 3497012

                                                                           
Query: 1676    attcctcccagtgaaccagtgcccacatcccagaccgccgagaggaccagccagttttgc 1735
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497013 attcctcccagtgaaccagtgcccacatcccagaccgccgagaggaccagccagttttgc 3497072

                                                                           
Query: 1736    agatcgttttgctgcgttttcccgtggtatacctacattgctgatttttaatatttcttt 1795
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497073 agatcgttttgctgcgttttcccgtggtatacctacattgctgatttttaatatttcttt 3497132

                                                                           
Query: 1796    tgagaaattcttattttttgacgtagtagaagcttcttggtactttgttctgtgtacttc 1855
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497133 tgagaaattcttattttttgacgtagtagaagcttcttggtactttgttctgtgtacttc 3497192

                                                                           
Query: 1856    ctcctgcccacaccctccttctggcctgtctgtgcccatcccgctttctttccttgaact 1915
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497193 ctcctgcccacaccctccttctggcctgtctgtgcccatcccgctttctttccttgaact 3497252

                                                                           
Query: 1916    ctttggtcccaacagccaggggtctggagacaggggctcctccacttctccaaggaccaa 1975
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497253 ctttggtcccaacagccaggggtctggagacaggggctcctccacttctccaaggaccaa 3497312

                   
Query: 1976    gagc 1979
               ||||
Sbjct: 3497313 gagc 3497316



 Score =  301 bits (152), Expect = 8e-79
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1       tacctcctggaggcggcaaccgctgctgctctgcccttcccggttggcaggggccagctg 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3367654 tacctcctggaggcggcaaccgctgctgctctgcccttcccggttggcaggggccagctg 3367713

                                                                           
Query: 61      cgcctcggttctttggtgaccatgggggacccgagcaagcaagacatcctgaccatcttc 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3367714 cgcctcggttctttggtgaccatgggggacccgagcaagcaagacatcctgaccatcttc 3367773

                                               
Query: 121     aagcgcctccgctcggtgcccaccaacaaggt 152
               ||||||||||||||||||||||||||||||||
Sbjct: 3367774 aagcgcctccgctcggtgcccaccaacaaggt 3367805



 Score =  283 bits (143), Expect = 2e-73
 Identities = 143/143 (100%)
 Strand = Plus / Plus

                                                                           
Query: 754     cttggggccaaaaaaggaagtctgggagcccagaaactggcgaatacgagctttaatgaa 813
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3470872 cttggggccaaaaaaggaagtctgggagcccagaaactggcgaatacgagctttaatgaa 3470931

                                                                           
Query: 814     attgaaaaacaagcccaagctgtagataagatgaaggaacaggaagaccttctggccagg 873
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3470932 attgaaaaacaagcccaagctgtagataagatgaaggaacaggaagaccttctggccagg 3470991

                                      
Query: 874     acggcttctaaggaggaatcgat 896
               |||||||||||||||||||||||
Sbjct: 3470992 acggcttctaaggaggaatcgat 3471014



 Score =  266 bits (134), Expect = 4e-68
 Identities = 134/134 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1147    aggtacttcgacgagccgatggaattaaggagcagttctttttccagttgggacgacagt 1206
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481125 aggtacttcgacgagccgatggaattaaggagcagttctttttccagttgggacgacagt 3481184

                                                                           
Query: 1207    tccgattcctactggaaaaaagagaccatcaaagacactgacccgaccctgaaaaccaca 1266
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481185 tccgattcctactggaaaaaagagaccatcaaagacactgacccgaccctgaaaaccaca 3481244

                             
Query: 1267    ggctacacagacag 1280
               ||||||||||||||
Sbjct: 3481245 ggctacacagacag 3481258



 Score =  262 bits (132), Expect = 7e-67
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                           
Query: 343     tcttcctttttccatcaacacgggtgtgccaccaacgacaccaatgccaagtacaacagt 402
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457119 tcttcctttttccatcaacacgggtgtgccaccaacgacaccaatgccaagtacaacagt 3457178

                                                                           
Query: 403     cgtgctgcccagctctatagggagaggatcaagtccctggcctcccaggcaaccaggaag 462
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457179 cgtgctgcccagctctatagggagaggatcaagtccctggcctcccaggcaaccaggaag 3457238

                           
Query: 463     cacggcacggac 474
               ||||||||||||
Sbjct: 3457239 cacggcacggac 3457250



 Score =  252 bits (127), Expect = 6e-64
 Identities = 127/127 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1492    gcaggaaactacaacctcacgagcgtgctgcccacggctcccgacatggcccagtttaag 1551
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3495238 gcaggaaactacaacctcacgagcgtgctgcccacggctcccgacatggcccagtttaag 3495297

                                                                           
Query: 1552    cagggggtgagatccgttgctggaaagctctccgtgtttgctaacggtgtcatgacttca 1611
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3495298 cagggggtgagatccgttgctggaaagctctccgtgtttgctaacggtgtcatgacttca 3495357

                      
Query: 1612    attcagg 1618
               |||||||
Sbjct: 3495358 attcagg 3495364



 Score =  250 bits (126), Expect = 3e-63
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1279    agacccgctgcccgtcgcaagccagaccacgagcccgtcgacgacacggacgaggcccag 1338
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3487078 agacccgctgcccgtcgcaagccagaccacgagcccgtcgacgacacggacgaggcccag 3487137

                                                                           
Query: 1339    aagaagtttggcaacgtcaaagccatctcctcagatatgtactttggaagacaagcccag 1398
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3487138 aagaagtttggcaacgtcaaagccatctcctcagatatgtactttggaagacaagcccag 3487197

                     
Query: 1399    gcagat 1404
               ||||||
Sbjct: 3487198 gcagat 3487203



 Score =  248 bits (125), Expect = 1e-62
 Identities = 128/129 (99%)
 Strand = Plus / Plus

                                                                           
Query: 1023    aagtggtatctcccattcggtgacttctgacatgcagaccattgaacaggaaacgccggt 1082
               ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3476937 aagtggtatctcccattcggtgacttccgacatgcagaccattgaacaggaaacgccggt 3476996

                                                                           
Query: 1083    cgtggcaaaaccaagaaaaaagtacagtgatgacaatgacgactcatattttacttccac 1142
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3476997 cgtggcaaaaccaagaaaaaagtacagtgatgacaatgacgactcatattttacttccac 3477056

                        
Query: 1143    ctcaaggta 1151
               |||||||||
Sbjct: 3477057 ctcaaggta 3477065



 Score =  240 bits (121), Expect = 2e-60
 Identities = 121/121 (100%)
 Strand = Plus / Plus

                                                                           
Query: 149     aggtgtgttttgactgtggtgccaagaaccccagctgggccagcataacctacggggtgt 208
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3372609 aggtgtgttttgactgtggtgccaagaaccccagctgggccagcataacctacggggtgt 3372668

                                                                           
Query: 209     tcctctgcatcgactgctcggggtcgcaccggtccctcggcgtccacctgagctttattc 268
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3372669 tcctctgcatcgactgctcggggtcgcaccggtccctcggcgtccacctgagctttattc 3372728

                
Query: 269     g 269
               |
Sbjct: 3372729 g 3372729



 Score =  206 bits (104), Expect = 3e-50
 Identities = 121/129 (93%)
 Strand = Plus / Plus

                                                                           
Query: 897     tgtttcatcattacgattagcctataaggatcttgaaattcagatgaagaaagaggaaaa 956
               ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3476002 tgtttcatcgttacgattagcctataaggatcttgaaattcagatgaagaaagaggaaaa 3476061

                                                                           
Query: 957     gatgaacatgagtggccnnnnnnnggtggaatcagagagacttggcatggggtttggaaa 1016
               |||||||||||||||||       ||||||||||||||||||||||||||||||||||||
Sbjct: 3476062 gatgaacatgagtggccaaaaaaaggtggaatcagagagacttggcatggggtttggaaa 3476121

                        
Query: 1017    ctgcagaag 1025
               |||||||||
Sbjct: 3476122 ctgcagaag 3476130



 Score =  182 bits (92), Expect = 5e-43
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1405    tacgaaaccagggctcggctggagaggttctcggcgagttcctccatcagttcagctgat 1464
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3488687 tacgaaaccagggctcggctggagaggttctcggcgagttcctccatcagttcagctgat 3488746

                                               
Query: 1465    ctgttcgaggagcagaggaagcagacagcagg 1496
               ||||||||||||||||||||||||||||||||
Sbjct: 3488747 ctgttcgaggagcagaggaagcagacagcagg 3488778



 Score =  165 bits (83), Expect = 1e-37
 Identities = 89/91 (97%)
 Strand = Plus / Plus

                                                                           
Query: 557     aggggagcggcccaggctgggcatcggctccgccagaaccgtcatctttaacattgagga 616
               ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3462213 aggggagcgtcccaggctgggcttcggctccgccagaaccgtcatctttaacattgagga 3462272

                                              
Query: 617     atgtggacacccctccagccaacagtgaagg 647
               |||||||||||||||||||||||||||||||
Sbjct: 3462273 atgtggacacccctccagccaacagtgaagg 3462303



 Score =  147 bits (74), Expect = 3e-32
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                           
Query: 269     gatctacagagctggattctaactggtcttggtttcagctgcgatgcatgcaagttggag 328
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3454358 gatctacagagctggattctaactggtcttggtttcagctgcgatgcatgcaagttggag 3454417

                             
Query: 329     gaaatgccagtgca 342
               ||||||||||||||
Sbjct: 3454418 gaaatgccagtgca 3454431



 Score =  127 bits (64), Expect = 3e-26
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                           
Query: 475     ctgtggcttgatagctgtgtggtcccgccttcgtcccctccaccaaaggaagaagannnn 534
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 3458159 ctgtggcttgatagctgtgtggtcccgccttcgtcccctccaccaaaggaagaagatttt 3458218

                                        
Query: 535     nnngcgtctcatgcttctcctgagg 559
                  ||||||||||||||||||||||
Sbjct: 3458219 tttgcgtctcatgcttctcctgagg 3458243



 Score =  123 bits (62), Expect = 4e-25
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                           
Query: 645     aggaggagcagaacaaggaccaagcgtggaaggtcttaatgtgcccactaaggctgctct 704
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3468412 aggaggagcagaacaaggaccaagcgtggaaggtcttaatgtgcccactaaggctgctct 3468471

                 
Query: 705     ag 706
               ||
Sbjct: 3468472 ag 3468473



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                                
Query: 705     agaggtttcctccatcataaaaaagaaaccaaatcaggccagacgagga 753
               |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3470323 agaggtttcctccatcataaaaaagaaaccaaatcaggccagacgagga 3470371


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 59,892,199
Number of extensions: 444
Number of successful extensions: 444
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 442
Number of HSP's successfully gapped: 16
Length of query: 1995
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1973
Effective length of database: 2,808,408,574
Effective search space: 5540990116502
Effective search space used: 5540990116502
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)