Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007812
(1617 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776314.1| adenylate kinase 2, mitochondrial [Bos taurus]. 447 e-125
Alignment gi|NP_776662.1| GTP:AMP phosphotransferase, mitochondrial [Bos ... 170 4e-42
Alignment gi|NP_001071401.1| adenylate kinase isoenzyme 4, mitochondrial ... 155 1e-37
Alignment gi|XP_002695630.1| PREDICTED: adenylate kinase isoenzyme 4, mit... 150 2e-36
Alignment gi|XP_588793.1| PREDICTED: adenylate kinase isoenzyme 4, mitoch... 150 2e-36
Alignment gi|NP_001013600.1| adenylate kinase isoenzyme 1 [Bos taurus]. 103 6e-22
Alignment gi|NP_001039509.1| UMP-CMP kinase [Bos taurus]. 89 1e-17
Alignment gi|NP_001193179.1| adenylate kinase 8 [Bos taurus]. 86 9e-17
Alignment gi|XP_002691698.1| PREDICTED: putative adenylate kinase-like pr... 86 9e-17
Alignment gi|NP_001077226.1| adenylate kinase isoenzyme 5 [Bos taurus]. 81 2e-15
>ref|NP_776314.1| adenylate kinase 2, mitochondrial [Bos taurus].
Length = 234
Score = 447 bits (1150), Expect = e-125
Identities = 222/234 (94%), Positives = 230/234 (98%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAPNV A+EP E PKG+RAVLLGPPGAGKGTQAP+LA+NFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPNVPAAEPVPESPKGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGS 60
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMV+ELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 61 ELGKKLKATMDAGKLVSDEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 120
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSIPD+LLIRRITGRLIHP+SGRSYHEEFNPPKEPMKDDITGEPLIRRSDD
Sbjct: 121 KEKLDSVIEFSIPDSLLIRRITGRLIHPQSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 180
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS 765
N+KALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS
Sbjct: 181 NKKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS 234
>ref|NP_776662.1| GTP:AMP phosphotransferase, mitochondrial [Bos taurus].
Length = 227
Score = 170 bits (430), Expect = 4e-42
Identities = 86/200 (43%), Positives = 132/200 (66%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RA ++G PG+GKGT + R+ ++F + HL++GD+LR + G+E+G K +D GKL+
Sbjct: 8 LRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIP 67
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
D+++ L+ L+ N +LLDGFPRT+ QAE LD R ++D+VI ++P ++
Sbjct: 68 DDVMTRLVLHELKNLTQYN-WLLDGFPRTLPQAEALD-----RAYQIDTVINLNVPFEVI 121
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R+T R IHP SGR Y+ EFNPPK DD+TGEPL++R DD + + RL+AY QT
Sbjct: 122 KQRLTARWIHPGSGRVYNIEFNPPKTMGIDDLTGEPLVQREDDRPETVVKRLKAYEAQTE 181
Query: 655 PLVEYYSKRGIHSAIDASQT 714
P++EYY K+G+ ++T
Sbjct: 182 PVLEYYRKKGVLETFSGTET 201
>ref|NP_001071401.1| adenylate kinase isoenzyme 4, mitochondrial [Bos taurus].
Length = 223
Score = 155 bits (391), Expect = 1e-37
Identities = 85/202 (42%), Positives = 123/202 (60%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 4 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD L + LD VI +IP
Sbjct: 64 VPDHVITRLMLLELENRRGEH-WLLDGFPRTLVQAEALDRLCD-----LDLVITLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP DD+TGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPPSGRVYNLDFNPPHVHGMDDVTGEPLVQQEDDKPEAVAARLRQYKDV 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|XP_002695630.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Bos
taurus].
Length = 223
Score = 150 bits (380), Expect = 2e-36
Identities = 84/202 (41%), Positives = 121/202 (59%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 4 KLLRAVVLGPPGSGKGTVCQRIAQNFSLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D + L+ LE ++ +LLDGFPRT+ QAE LD L + LD VI +I
Sbjct: 64 VPDHGITRLMLLELENRRGEH-WLLDGFPRTLVQAEALDRLCD-----LDLVITLNIAFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP DD+TGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPPSGRVYNLDFNPPHVHGMDDVTGEPLVQQEDDKPEAVAARLRQYKDV 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 ARPVIELYKSRGVLHQFSGTET 199
>ref|XP_588793.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Bos
taurus].
Length = 223
Score = 150 bits (380), Expect = 2e-36
Identities = 84/202 (41%), Positives = 121/202 (59%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G LR + + +E+G K ++ G L
Sbjct: 4 KLLRAVVLGPPGSGKGTVCQRIAQNFSLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D + L+ LE ++ +LLDGFPRT+ QAE LD L + LD VI +I
Sbjct: 64 VPDHGITRLMLLELENRRGEH-WLLDGFPRTLVQAEALDRLCD-----LDLVITLNIAFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP DD+TGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPPSGRVYNLDFNPPHVHGMDDVTGEPLVQQEDDKPEAVAARLRQYKDV 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 ARPVIELYKSRGVLHQFSGTET 199
>ref|NP_001013600.1| adenylate kinase isoenzyme 1 [Bos taurus].
Length = 194
Score = 103 bits (256), Expect = 6e-22
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Frame = +1
Query: 127 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV 306
++G PG+GKGTQ ++ + + HL+TGD+LRA V+SGS GK L M+ G+LV E V
Sbjct: 13 VVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETV 72
Query: 307 VELI-EKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALLIRR 483
++++ + + GFL+DG+PR V+Q E E+R + ++ + +R
Sbjct: 73 LDMLRDAMVAKVDTSKGFLIDGYPREVQQGEE----FERRIAQPTLLLYVDAGPETMTKR 128
Query: 484 ITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTTPLV 663
+ R + +G R DDNE+ +K RLE Y+ T P++
Sbjct: 129 LLKR----------------------GETSG-----RVDDNEETIKKRLETYYKATEPVI 161
Query: 664 EYYSKRGIHSAIDASQTPDVVFASI 738
+Y KRGI ++A + D VF+ +
Sbjct: 162 AFYEKRGIVRKVNAEGSVDNVFSQV 186
>ref|NP_001039509.1| UMP-CMP kinase [Bos taurus].
Length = 228
Score = 88.6 bits (218), Expect = 1e-17
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Frame = +1
Query: 127 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLR-AMVASGSELGKKLKATMDAGKLVSDEM 303
+LG PGAGKGTQ R+ E + HL+ G++LR S+ G+ ++ + GK+V E+
Sbjct: 40 VLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKDGKIVPVEI 99
Query: 304 VVELIEKNLETPPC----KNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDAL 471
+ L+ + ++ KN FL+DGFPR + + M+ K + V+ F + +
Sbjct: 100 TISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMD-GKADVSFVLFFDCNNEI 158
Query: 472 LIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQT 651
I R R G+S RSDDN ++L+ R++ Y T
Sbjct: 159 CIERCLER------GKS---------------------SGRSDDNRESLEKRIQTYLQST 191
Query: 652 TPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSK 756
P+++ Y + G IDAS++ D VF ++ F K
Sbjct: 192 KPIIDLYEEMGKVRKIDASKSVDEVFDEVVKIFDK 226
>ref|NP_001193179.1| adenylate kinase 8 [Bos taurus].
Length = 479
Score = 85.9 bits (211), Expect = 9e-17
Identities = 55/208 (26%), Positives = 109/208 (52%), Gaps = 1/208 (0%)
Frame = +1
Query: 118 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSD 297
R +L GP G+GK QA LA+ + + ++ G +L+ VA S+ ++ + V D
Sbjct: 270 RVLLCGPVGSGKSLQAALLAQKYGLINVCCGQLLKEAVADKSKYSDLIQPFFEKEIAVPD 329
Query: 298 EMVVELIEKNLETPPC-KNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
++++++++ L+ C + G++L GFPR + QA ++D+L K + V ++P +
Sbjct: 330 NIIMKVLKQRLDQQDCVERGWVLHGFPRDLDQAHLMDNL----GYKPNRVFFLNVPFDSV 385
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
I R++ R P +G YH + PP P + L++ D+E+ +K++++ ++ +
Sbjct: 386 IERLSLRRTDPITGERYHLMYKPP--PTIE--VQARLLQNPKDSEEQIKLKMDLFYRNSA 441
Query: 655 PLVEYYSKRGIHSAIDASQTPDVVFASI 738
L ++Y G ++ Q P VF I
Sbjct: 442 ELEQFY---GDAITLNGDQDPYTVFEYI 466
Score = 70.9 bits (172), Expect = 3e-12
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Frame = +1
Query: 118 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDM-LRAMVASG-SELGKKLKATMDAGKLV 291
+ V+LGPP +GK T A LA+ HL+T + + +++A S L + K+V
Sbjct: 59 KIVILGPPASGKTTIAMWLAK-----HLSTNLLSVESLIAKEYSPLAADARMHYQKFKMV 113
Query: 292 SDEMVVELIEKNLETPPC-KNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
D +++ L+++ L+ C + G++LDG P T QA + L + VI S PD
Sbjct: 114 PDMLLIRLMQERLKEEDCVRRGWILDGIPETREQALTIQTLGISPRH----VIVLSAPDT 169
Query: 469 LLIRRITGRLIHPKSGRSYHEEFN-PPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHT 645
+LI R G+ I P++G YH F+ PP+ +++ + I + K L+ YH
Sbjct: 170 VLIERNLGKRIDPQTGEIYHTTFDWPPESEIQNRLMVPAGIFEGETARKLLE-----YHR 224
Query: 646 QTTPLVEYYSKRGIHSAIDASQTPDVVFASIL 741
++ Y K I I A Q VF L
Sbjct: 225 NIVRILPSYPK--ILKVISADQPCVDVFYQAL 254
>ref|XP_002691698.1| PREDICTED: putative adenylate kinase-like protein C9orf98-like [Bos
taurus].
Length = 479
Score = 85.9 bits (211), Expect = 9e-17
Identities = 55/208 (26%), Positives = 109/208 (52%), Gaps = 1/208 (0%)
Frame = +1
Query: 118 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSD 297
R +L GP G+GK QA LA+ + + ++ G +L+ VA S+ ++ + V D
Sbjct: 270 RVLLCGPVGSGKSLQAALLAQKYGLINVCCGQLLKEAVADKSKYSDLIQPFFEKEIAVPD 329
Query: 298 EMVVELIEKNLETPPC-KNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
++++++++ L+ C + G++L GFPR + QA ++D+L K + V ++P +
Sbjct: 330 NIIMKVLKQRLDQQDCVERGWVLHGFPRDLDQAHLMDNL----GYKPNRVFFLNVPFDSV 385
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
I R++ R P +G YH + PP P + L++ D+E+ +K++++ ++ +
Sbjct: 386 IERLSLRRTDPITGERYHLMYKPP--PTIE--VQARLLQNPKDSEEQIKLKMDLFYRNSA 441
Query: 655 PLVEYYSKRGIHSAIDASQTPDVVFASI 738
L ++Y G ++ Q P VF I
Sbjct: 442 ELEQFY---GDAITLNGDQDPYTVFEYI 466
Score = 70.9 bits (172), Expect = 3e-12
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Frame = +1
Query: 118 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDM-LRAMVASG-SELGKKLKATMDAGKLV 291
+ V+LGPP +GK T A LA+ HL+T + + +++A S L + K+V
Sbjct: 59 KIVILGPPASGKTTIAMWLAK-----HLSTNLLSVESLIAKEYSPLAADARMHYQKFKMV 113
Query: 292 SDEMVVELIEKNLETPPC-KNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
D +++ L+++ L+ C + G++LDG P T QA + L + VI S PD
Sbjct: 114 PDMLLIRLMQERLKEEDCVRRGWILDGIPETREQALTIQTLGISPRH----VIVLSAPDT 169
Query: 469 LLIRRITGRLIHPKSGRSYHEEFN-PPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHT 645
+LI R G+ I P++G YH F+ PP+ +++ + I + K L+ YH
Sbjct: 170 VLIERNLGKRIDPQTGEIYHTTFDWPPESEIQNRLMVPAGIFEGETARKLLE-----YHR 224
Query: 646 QTTPLVEYYSKRGIHSAIDASQTPDVVFASIL 741
++ Y K I I A Q VF L
Sbjct: 225 NIVRILPSYPK--ILKVISADQPCVDVFYQAL 254
>ref|NP_001077226.1| adenylate kinase isoenzyme 5 [Bos taurus].
Length = 562
Score = 81.3 bits (199), Expect = 2e-15
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Frame = +1
Query: 88 EPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGK--KL 261
+P + PK I +++G PG+GKGTQ+ ++AE + +++ G++LR + S S K +
Sbjct: 126 DPTRPRPKII--LVIGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKWSLI 183
Query: 262 KATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDS 441
+ G+L E + I++ L P + G ++DGFPR V QA +D
Sbjct: 184 AKIITTGELAPQETTITEIKQKLMQMPDEVGIVIDGFPRDVAQALSFED----------- 232
Query: 442 VIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALK 621
+ PD ++ T + + + + ++ P DDN KA +
Sbjct: 233 --QICTPDLVVFLACTNQRLKERLLKRAEQQGRP------------------DDNLKATQ 272
Query: 622 IRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAA 747
RL + PLV+Y+ ++G+ DA + D VF I A
Sbjct: 273 RRLMNFKQNAAPLVKYFQEKGLIMTFDADRDEDEVFYDISMA 314
Score = 80.5 bits (197), Expect = 4e-15
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Frame = +1
Query: 127 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV 306
++G PG+GKGTQ +LAE + HL+T ++L+ ++S S K ++ M+ G+LV ++
Sbjct: 381 MIGGPGSGKGTQCGKLAEKYGFTHLSTDELLQNELSSESGRSKLIRDIMERGELVPSGII 440
Query: 307 VELI-EKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALLIRR 483
+EL+ E + + GFL+DG+PR V+Q E +R VI + R
Sbjct: 441 LELLKEAMVASLSNTKGFLIDGYPREVKQGEEFG----RRIGDPHLVICMDCSADTMTNR 496
Query: 484 ITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTTPLV 663
+ R N P ++DDN + RLE Y+ + P+V
Sbjct: 497 LLQR------------SRNSP---------------QADDNTTTIAKRLETYYRASIPVV 529
Query: 664 EYYSKRGIHSAIDASQTPDVVFASILAA 747
YY + I+A TP+ VF + A
Sbjct: 530 AYYETKTQLHKINAEGTPEEVFLQLCTA 557
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 65,427,578
Number of extensions: 1905247
Number of successful extensions: 6345
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 6300
Number of HSP's successfully gapped: 20
Length of query: 539
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 432
Effective length of database: 14,140,958
Effective search space: 6108893856
Effective search space used: 6108893856
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007812
(1617 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_864020.1| PREDICTED: similar to adenylate kinase 2 isofor... 443 e-124
Alignment gi|XP_535321.2| PREDICTED: similar to Adenylate kinase isoenzym... 441 e-124
Alignment gi|XP_537864.2| PREDICTED: similar to adenylate kinase 3 [Canis... 171 2e-42
Alignment gi|XP_853049.1| PREDICTED: similar to adenylate kinase 3 [Canis... 168 1e-41
Alignment gi|XP_851083.1| PREDICTED: similar to adenylate kinase 3 [Canis... 166 8e-41
Alignment gi|XP_538558.1| PREDICTED: similar to adenylate kinase 3 [Canis... 157 4e-38
Alignment gi|XP_546674.2| PREDICTED: similar to Adenylate kinase isoenzym... 155 1e-37
Alignment gi|XP_533543.2| PREDICTED: similar to adenylate kinase 3 [Canis... 127 2e-29
Alignment gi|NP_001124519.1| adenylate kinase isoenzyme 1 [Canis lupus fa... 103 5e-22
Alignment gi|XP_854522.1| PREDICTED: similar to adenylate kinase 5 isofor... 92 1e-18
>ref|XP_864020.1| PREDICTED: similar to adenylate kinase 2 isoform b isoform 2 [Canis
familiaris].
Length = 234
Score = 443 bits (1139), Expect = e-124
Identities = 221/234 (94%), Positives = 227/234 (97%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAPNV A+EPA E PKGIRAVLLGPPGAGKGTQAP+LAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPNVPAAEPAPESPKGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGS 60
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETP CKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 61 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPQCKNGFLLDGFPRTVRQAEMLDDLMEKR 120
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSIPD+LLIRRITGRLIHP SGRSYHEEFNPPKEPMKDDITGEPL+RRSDD
Sbjct: 121 KEKLDSVIEFSIPDSLLIRRITGRLIHPLSGRSYHEEFNPPKEPMKDDITGEPLVRRSDD 180
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS 765
NEKALKIRLEAYHTQTTPLV+YY KRGIHS IDA+QTPDVVFASILAAFSKATS
Sbjct: 181 NEKALKIRLEAYHTQTTPLVDYYRKRGIHSVIDATQTPDVVFASILAAFSKATS 234
>ref|XP_535321.2| PREDICTED: similar to Adenylate kinase isoenzyme 2, mitochondrial
(ATP-AMP transphosphorylase) isoform 1 [Canis
familiaris].
Length = 241
Score = 441 bits (1135), Expect = e-124
Identities = 220/233 (94%), Positives = 226/233 (96%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAPNV A+EPA E PKGIRAVLLGPPGAGKGTQAP+LAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPNVPAAEPAPESPKGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGS 60
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETP CKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 61 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPQCKNGFLLDGFPRTVRQAEMLDDLMEKR 120
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSIPD+LLIRRITGRLIHP SGRSYHEEFNPPKEPMKDDITGEPL+RRSDD
Sbjct: 121 KEKLDSVIEFSIPDSLLIRRITGRLIHPLSGRSYHEEFNPPKEPMKDDITGEPLVRRSDD 180
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKAT 762
NEKALKIRLEAYHTQTTPLV+YY KRGIHS IDA+QTPDVVFASILAAFSKAT
Sbjct: 181 NEKALKIRLEAYHTQTTPLVDYYRKRGIHSVIDATQTPDVVFASILAAFSKAT 233
>ref|XP_537864.2| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 258
Score = 171 bits (433), Expect = 2e-42
Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 2/210 (0%)
Frame = +1
Query: 91 PAQEGPKG--IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLK 264
PA +G +RAV+LG PG+GKGT + R+ ++F + HL++GD+LR + G+E+G K
Sbjct: 29 PAAKGASARLLRAVILGAPGSGKGTVSSRITKHFALKHLSSGDLLRDDMLRGTEIGVLAK 88
Query: 265 ATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSV 444
+D GKL+ DE++ L L+ + +LLDGFPRT+ QAE LD + D+V
Sbjct: 89 TFIDQGKLIPDEVMTRLTLHELKNLT-QYSWLLDGFPRTLPQAEALDGAYQT-----DTV 142
Query: 445 IEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKI 624
I ++P ++ +R+T R IHP SGR Y+ EFNPPK DD+TGEPLI+R DD + +
Sbjct: 143 INLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKAVGIDDLTGEPLIQRDDDQPETVVK 202
Query: 625 RLEAYHTQTTPLVEYYSKRGIHSAIDASQT 714
RL+AY QT P++EYY K+G+ ++T
Sbjct: 203 RLKAYEVQTHPVLEYYRKKGVLETFSGTET 232
>ref|XP_853049.1| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 2078
Score = 168 bits (426), Expect = 1e-41
Identities = 86/200 (43%), Positives = 130/200 (65%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RAV++G PG+GKGT + R+ ++F + HL++GD+LR + G+E+G K +D GKL+
Sbjct: 8 LRAVIMGAPGSGKGTVSSRITKHFALKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIP 67
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
D ++ L L+ + +LLDGFPRT+ QAE LD + +D+VI ++P ++
Sbjct: 68 DGVMTRLALHELKNLT-QYSWLLDGFPRTLPQAEALDGAYQ-----IDTVINLNVPFEVI 121
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R+T R IHP SGR Y+ EFNPPK DD+TGEPLI+R DD + + RL+AY QT
Sbjct: 122 KQRLTARWIHPASGRVYNIEFNPPKAVGIDDLTGEPLIQRDDDKPETVVKRLKAYEVQTQ 181
Query: 655 PLVEYYSKRGIHSAIDASQT 714
P++EYY K+G+ ++T
Sbjct: 182 PVLEYYRKKGVLETFSGTET 201
>ref|XP_851083.1| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 288
Score = 166 bits (419), Expect = 8e-41
Identities = 89/220 (40%), Positives = 137/220 (62%)
Frame = +1
Query: 55 SAAMAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVA 234
+ A AP + A+ A + +RAV++G PG+GKGT + R+ +F + HL++GD+LR +
Sbjct: 51 AGAPAPRLPAARGASA--RLLRAVIMGAPGSGKGTVSSRITRHFALKHLSSGDLLRDDML 108
Query: 235 SGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLM 414
G+E+G K +D GKL DE++ L L+ + +LLDGFPRT+ QAE L
Sbjct: 109 RGTEIGVLAKTFIDQGKLTQDEVMTRLALHELKNLT-QYSWLLDGFPRTLPQAEALHGAY 167
Query: 415 EKRKEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRR 594
+ +D+ I ++P ++ +R+T R IHP SGR ++ EFNPPK DD+TGEPLI+R
Sbjct: 168 Q-----IDTAINLNVPFEVIKQRLTARWIHPASGRVHNIEFNPPKAVGIDDLTGEPLIQR 222
Query: 595 SDDNEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQT 714
DD + + RL+AY QT P++EYY K+G+ + ++T
Sbjct: 223 DDDQPETVVKRLKAYEVQTQPVLEYYRKKGVLESFSGTET 262
>ref|XP_538558.1| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 227
Score = 157 bits (396), Expect = 4e-38
Identities = 82/203 (40%), Positives = 127/203 (62%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RAVL+GPPG+GK T A R+ + F + ++GD+LR + +E+G K MD GKL+
Sbjct: 8 LRAVLMGPPGSGKRTVALRITKGFQLKTFSSGDLLRDNLLRDTEIGVLAKVFMDQGKLIP 67
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
D+++ L L+T + +LL GFPRT+ QAE L+ R ++ V+ ++P ++
Sbjct: 68 DDIMTRLTLHQLKTFT-QESWLLCGFPRTLPQAEALE-----RAYQIHLVMSLNVPSEVI 121
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R++ R IHP SGR Y+ EFNPPK DD+TGEPL++R DD + L RL+AY QT
Sbjct: 122 KQRLSARWIHPSSGRVYNLEFNPPKAIGLDDLTGEPLVQREDDRPETLNQRLKAYEDQTK 181
Query: 655 PLVEYYSKRGIHSAIDASQTPDV 723
P++EYY ++G+ ++T +
Sbjct: 182 PVLEYYREKGVLETFSGTKTDQI 204
>ref|XP_546674.2| PREDICTED: similar to Adenylate kinase isoenzyme 4, mitochondrial
(ATP-AMP transphosphorylase) [Canis familiaris].
Length = 223
Score = 155 bits (392), Expect = 1e-37
Identities = 85/202 (42%), Positives = 123/202 (60%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A++F + HL++G LR + + +E+G K ++ G L
Sbjct: 4 KLLRAVILGPPGSGKGTVCQRIAQSFGLQHLSSGHFLRENIRANTEVGDMAKQYIEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + E LD VI +IP
Sbjct: 64 VPDHVITRLMMSELENRRLQH-WLLDGFPRTLVQAEALDKICE-----LDLVITLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP DDITGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDITGEPLVQQEDDKPEAVAARLRQYKDV 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|XP_533543.2| PREDICTED: similar to adenylate kinase 3 [Canis familiaris].
Length = 203
Score = 127 bits (320), Expect = 2e-29
Identities = 67/157 (42%), Positives = 98/157 (62%)
Frame = +1
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
E+G K +D GKL+ D+++ L L+ + +LLDGFPRT+ QAE LD +
Sbjct: 27 EIGVLAKTFIDQGKLIPDDVMTRLALHELKNLT-QYSWLLDGFPRTLPQAEALDGAYQ-- 83
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
+D+VI ++P ++ +R+T R IHP SGR Y+ EFNPPK DD+TGEPLI+R DD
Sbjct: 84 ---IDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKAVGIDDLTGEPLIQRDDD 140
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQT 714
+ + RL+AY QT P++EYY K+G+ ++T
Sbjct: 141 KPETVVKRLKAYEVQTQPVLEYYRKKGVLETFSGTET 177
>ref|NP_001124519.1| adenylate kinase isoenzyme 1 [Canis lupus familiaris].
Length = 210
Score = 103 bits (257), Expect = 5e-22
Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Frame = +1
Query: 73 NVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELG 252
NV S+ ++ K ++G PG+GKGTQ ++ + + HL+TGD+LRA V+SGS G
Sbjct: 11 NVEDSKAREKLKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARG 70
Query: 253 KKLKATMDAGKLVSDEMVVELI-EKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKE 429
K L M+ G+LV E V++++ + + GFL+DG+PR V+Q E E+R
Sbjct: 71 KMLSEIMEKGQLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVQQGEE----FERRIG 126
Query: 430 KLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE 609
+ ++ + +R+ R + +G R DDNE
Sbjct: 127 QPTLLLYVDAGPETMTQRLLKR----------------------GETSG-----RVDDNE 159
Query: 610 KALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASI 738
+ +K RLE Y+ T P++ +Y KRGI ++A + D VF+ +
Sbjct: 160 ETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDNVFSQV 202
>ref|XP_854522.1| PREDICTED: similar to adenylate kinase 5 isoform 1 [Canis
familiaris].
Length = 298
Score = 92.0 bits (227), Expect = 1e-18
Identities = 59/202 (29%), Positives = 98/202 (48%)
Frame = +1
Query: 127 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV 306
++G PG GKGTQ +A + H+ G +LR ++ G+K+ M G LV ++
Sbjct: 117 VMGGPGCGKGTQCKNMATKYGFRHVGLGQLLRQEARRSTQRGRKIYDIMLQGLLVPTGII 176
Query: 307 VELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALLIRRI 486
++LI + + P GFL+DGFPR ++QA+ + L+ + D VI F ++RR+
Sbjct: 177 LDLISSTMLSHPESRGFLIDGFPRGLKQAKEFERLVGRAP---DIVIVFDCSMDTMVRRV 233
Query: 487 TGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTTPLVE 666
R GR H R+DD E A++ RLE Y+ P++
Sbjct: 234 LHR------GRVEH---------------------RADDCESAIRQRLETYYMLCEPVLT 266
Query: 667 YYSKRGIHSAIDASQTPDVVFA 732
+Y ++ + I A + P+ +FA
Sbjct: 267 FYQQKNLLCNILAEEAPENIFA 288
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 68,333,622
Number of extensions: 1962475
Number of successful extensions: 6668
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 6632
Number of HSP's successfully gapped: 19
Length of query: 539
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 431
Effective length of database: 15,274,216
Effective search space: 6583187096
Effective search space used: 6583187096
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007812
(1617 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003361623.1| PREDICTED: adenylate kinase 2, mitochondrial... 442 e-124
Alignment gi|XP_003361624.1| PREDICTED: adenylate kinase 2, mitochondrial... 418 e-117
Alignment gi|XP_001924714.2| PREDICTED: GTP:AMP phosphotransferase, mitoc... 170 2e-42
Alignment gi|NP_001038062.1| adenylate kinase isoenzyme 4, mitochondrial ... 140 2e-33
Alignment gi|XP_003353573.1| PREDICTED: GTP:AMP phosphotransferase, mitoc... 131 1e-30
Alignment gi|XP_003361231.1| PREDICTED: adenylate kinase isoenzyme 4, mit... 108 9e-24
Alignment gi|XP_003122225.2| PREDICTED: adenylate kinase isoenzyme 1 isof... 97 3e-20
Alignment gi|XP_003353744.1| PREDICTED: adenylate kinase 8 [Sus scrofa]. 87 3e-17
Alignment gi|XP_003127969.2| PREDICTED: adenylate kinase isoenzyme 5 [Sus... 74 3e-13
Alignment gi|XP_003356474.1| PREDICTED: adenylate kinase isoenzyme 5-like... 72 1e-12
>ref|XP_003361623.1| PREDICTED: adenylate kinase 2, mitochondrial-like isoform 1 [Sus
scrofa].
Length = 228
Score = 442 bits (1136), Expect = e-124
Identities = 226/234 (96%), Positives = 226/234 (96%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAPNVTASEPAQEGPKGIRAVL PP QAPRLAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPNVTASEPAQEGPKGIRAVLSSPP------QAPRLAENFCVCHLATGDMLRAMVASGS 54
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 55 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 114
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD
Sbjct: 115 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 174
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS 765
NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS
Sbjct: 175 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS 228
>ref|XP_003361624.1| PREDICTED: adenylate kinase 2, mitochondrial-like isoform 2 [Sus
scrofa].
Length = 227
Score = 418 bits (1075), Expect = e-117
Identities = 217/233 (93%), Positives = 217/233 (93%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAPNVTASEPAQEGPKGIRAVL PP QAPRLAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPNVTASEPAQEGPKGIRAVLSSPP------QAPRLAENFCVCHLATGDMLRAMVASGS 54
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 55 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 114
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSIPDAL LIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD
Sbjct: 115 KEKLDSVIEFSIPDAL--------LIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 166
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKAT 762
NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKAT
Sbjct: 167 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKAT 219
>ref|XP_001924714.2| PREDICTED: GTP:AMP phosphotransferase, mitochondrial isoform 1 [Sus
scrofa].
Length = 227
Score = 170 bits (431), Expect = 2e-42
Identities = 87/200 (43%), Positives = 132/200 (66%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RA ++G PG+GKGT + R+ ++F + HL++GD+LR + G+E+G K +D GKL+
Sbjct: 8 LRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIP 67
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
D+++ L+ L+ + +LLDGFPRT+ QAE LD R +LD+VI ++P ++
Sbjct: 68 DDVMTRLVLHELKNLT-QYSWLLDGFPRTLLQAEALD-----RVYQLDTVINLNVPFEVI 121
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R+T R IHP SGR Y+ EFNPPK DDITGEPL++R DD + + RL+AY QT
Sbjct: 122 KQRLTARWIHPGSGRVYNIEFNPPKTVGIDDITGEPLVQREDDKPETVVKRLKAYEAQTE 181
Query: 655 PLVEYYSKRGIHSAIDASQT 714
P++EYY K+G+ ++T
Sbjct: 182 PVLEYYRKKGVLETFSGTET 201
>ref|NP_001038062.1| adenylate kinase isoenzyme 4, mitochondrial [Sus scrofa].
Length = 178
Score = 140 bits (354), Expect = 2e-33
Identities = 79/177 (44%), Positives = 111/177 (62%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+N + HL++G LR + + +E+G K ++ G L
Sbjct: 4 KLLRAVILGPPGSGKGTVCQRIAQNLGLQHLSSGHFLRENIKANTEVGDMAKQYIEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + + LD VI +IP
Sbjct: 64 VPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD-----LDLVITLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAY 639
L R++ R IHP SGR Y+ +FNPP DDITGEPLI++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDKPEAVAARLRQY 174
>ref|XP_003353573.1| PREDICTED: GTP:AMP phosphotransferase, mitochondrial isoform 2 [Sus
scrofa].
Length = 187
Score = 131 bits (329), Expect = 1e-30
Identities = 74/200 (37%), Positives = 109/200 (54%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RA ++G PG+GKGT + R+ ++F + HL++GD+LR + G+
Sbjct: 8 LRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGT----------------- 50
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
GFPRT+ QAE LD R +LD+VI ++P ++
Sbjct: 51 ------------------------GFPRTLLQAEALD-----RVYQLDTVINLNVPFEVI 81
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R+T R IHP SGR Y+ EFNPPK DDITGEPL++R DD + + RL+AY QT
Sbjct: 82 KQRLTARWIHPGSGRVYNIEFNPPKTVGIDDITGEPLVQREDDKPETVVKRLKAYEAQTE 141
Query: 655 PLVEYYSKRGIHSAIDASQT 714
P++EYY K+G+ ++T
Sbjct: 142 PVLEYYRKKGVLETFSGTET 161
>ref|XP_003361231.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like,
partial [Sus scrofa].
Length = 174
Score = 108 bits (270), Expect = 9e-24
Identities = 63/156 (40%), Positives = 89/156 (57%)
Frame = +1
Query: 247 LGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRK 426
+G K ++ G LV D ++ L+ LE ++ +LLDGFPRT+ QAE LD + +
Sbjct: 1 VGDMAKQYIEKGLLVPDHLITRLMLSELENRRGQH-WLLDGFPRTLVQAEALDKICD--- 56
Query: 427 EKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDN 606
LD VI +IP L R++ R IHP SGR Y+ +FNPP DDITGEPLI++ DD
Sbjct: 57 --LDLVITLNIPFETLKDRLSRRWIHPSSGRVYNLDFNPPHVHGIDDITGEPLIQQEDDK 114
Query: 607 EKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQT 714
+A+ RL Y P++E Y RG+ ++T
Sbjct: 115 PEAVAARLRQYKDVAKPVIELYKGRGVLHQFSGTET 150
>ref|XP_003122225.2| PREDICTED: adenylate kinase isoenzyme 1 isoform 1 [Sus scrofa].
Length = 199
Score = 96.7 bits (239), Expect = 3e-20
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 6/210 (2%)
Frame = +1
Query: 127 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV 306
++G PG+GKGTQ ++ + + HL+TGD+LRA V+SGS GK L M+ G+LV E V
Sbjct: 13 VVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLETV 72
Query: 307 VELI-EKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALLIRR 483
++++ + + GFL+DG+PR V+Q E + RK ++
Sbjct: 73 LDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFE-----RKIGQPTL------------- 114
Query: 484 ITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTTPLV 663
L++ +G P+ K + R DDNE+ +K RLE Y+ T P++
Sbjct: 115 ----LLYVDAG---------PETMTKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVI 161
Query: 664 EYYSKRGI-----HSAIDASQTPDVVFASI 738
+Y KRGI ++A + D VF+ +
Sbjct: 162 AFYEKRGIVRKVRAQRVNAEGSVDDVFSQV 191
>ref|XP_003353744.1| PREDICTED: adenylate kinase 8 [Sus scrofa].
Length = 498
Score = 87.0 bits (214), Expect = 3e-17
Identities = 53/186 (28%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Frame = +1
Query: 118 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSD 297
R +LLGP G+GK QA LA+ + + ++ G +L+ VA S+ GK + + + V D
Sbjct: 289 RVLLLGPMGSGKSLQAALLAQKYGLVNVCCGQLLKEAVADKSKYGKVILSFFEKEIAVPD 348
Query: 298 EMVVELIEKNLETPPC-KNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
++++++ + L+ C + G++L GFPR + QA ML+ L K + V ++P +
Sbjct: 349 SIIMKVLGRRLDQQDCVERGWVLHGFPRDLDQAHMLNSL----GYKPNRVFFLNVPFDSI 404
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+ R+T R P +G YH + PP +I L++ D E+ +K++++ + +
Sbjct: 405 LERLTLRRTDPVTGERYHLMYKPPPTV---EIQAR-LLQNPKDTEEQVKLKMDLFCRTSA 460
Query: 655 PLVEYY 672
L ++Y
Sbjct: 461 ELEQFY 466
Score = 60.8 bits (146), Expect = 2e-09
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Frame = +1
Query: 118 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSD 297
+ ++LGPP +GK T A L ++ L+ +++ +S L + K +
Sbjct: 78 KILVLGPPASGKTTVAMWLCKHLRSNLLSVENLIARQFSS---LAAGARQHYQKFKTLPS 134
Query: 298 EMVVELIEKNLETPPC-KNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
++V L++ L C G++LDG P T QA +L L + VI S PD +L
Sbjct: 135 GLLVRLVQARLREEDCVTRGWILDGIPETREQALLLQTLGIAPRH----VIVLSAPDTVL 190
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEP 555
I R G+ + P +G YH F+ P +P
Sbjct: 191 IERNLGKRVDPLTGEVYHTTFDWPPQP 217
>ref|XP_003127969.2| PREDICTED: adenylate kinase isoenzyme 5 [Sus scrofa].
Length = 319
Score = 73.6 bits (179), Expect = 3e-13
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 11/221 (4%)
Frame = +1
Query: 127 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV 306
++G PG+GKGTQ +L E + + HL+T +LR ++S SE K ++ M+ G+LV ++
Sbjct: 116 MIGGPGSGKGTQCEKLGEKYGLTHLSTDKLLRNELSSESERSKLIRDVMERGELVPSGII 175
Query: 307 VELI-EKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFS--IPDALLI 477
+EL+ E + + GFL+DG+PR V+Q E EF I D L+
Sbjct: 176 LELLKEAMVASLSNTKGFLIDGYPREVKQGE-----------------EFGRRIGDPHLV 218
Query: 478 RRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRR-----SDDNEKALKIRLEAYH 642
+ + D +T L RR +D++ + RLE Y+
Sbjct: 219 ICM---------------------DCSADTMTNRLLQRRQSSPCADEDTTTIAKRLETYY 257
Query: 643 TQTTPLVEYY-SKRGIHSAIDASQTPDVVFAS--ILAAFSK 756
+ P+V YY +K +H + + F+S +L FS+
Sbjct: 258 RASIPVVAYYETKTQLHKIMRRGRQKKFFFSSAQLLTLFSE 298
>ref|XP_003356474.1| PREDICTED: adenylate kinase isoenzyme 5-like, partial [Sus scrofa].
Length = 297
Score = 71.6 bits (174), Expect = 1e-12
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Frame = +1
Query: 88 EPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGK--KL 261
+P + PK I +++G PG+GKGTQ+ ++AE + +++ G++LR + S S K +
Sbjct: 126 DPTRPRPKII--LVIGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKWSLI 183
Query: 262 KATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDS 441
+ G+L E + I++ L P + G ++DGFPR V QA +D
Sbjct: 184 AKIITTGELAPQETTITEIKQKLMQMPDEVGIVIDGFPRDVAQALSFED----------- 232
Query: 442 VIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALK 621
+ PD ++ + + + + ++ P DDN KA +
Sbjct: 233 --QICTPDLVVFLACANQRLKERLQKRAEQQGRP------------------DDNLKATQ 272
Query: 622 IRLEAYHTQTTPLVEYYSKRGI 687
RL + PLV+Y+ ++G+
Sbjct: 273 RRLMNFKQNAAPLVKYFQEKGL 294
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 42,210,447
Number of extensions: 1227361
Number of successful extensions: 4229
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 4208
Number of HSP's successfully gapped: 14
Length of query: 539
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 435
Effective length of database: 8,754,644
Effective search space: 3808270140
Effective search space used: 3808270140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007812
(1617 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_058591.2| adenylate kinase 2, mitochondrial isoform b [Mu... 436 e-122
Alignment gi|NP_001029138.1| adenylate kinase 2, mitochondrial isoform a ... 434 e-122
Alignment gi|NP_067274.1| GTP:AMP phosphotransferase, mitochondrial [Mus ... 170 3e-42
Alignment gi|NP_033777.1| adenylate kinase isoenzyme 4, mitochondrial [Mu... 162 7e-40
Alignment gi|NP_001171076.1| adenylate kinase isoenzyme 4, mitochondrial ... 162 7e-40
Alignment gi|NP_001171075.1| adenylate kinase isoenzyme 4, mitochondrial ... 162 7e-40
Alignment gi|NP_001171073.1| adenylate kinase isoenzyme 4, mitochondrial ... 162 7e-40
Alignment gi|NP_067490.1| adenylate kinase isoenzyme 1 isoform 1 [Mus mus... 117 2e-26
Alignment gi|NP_001185721.1| adenylate kinase isoenzyme 1 isoform 2 [Mus ... 115 1e-25
Alignment gi|NP_001185720.1| adenylate kinase isoenzyme 1 isoform 2 [Mus ... 115 1e-25
>ref|NP_058591.2| adenylate kinase 2, mitochondrial isoform b [Mus musculus].
Length = 232
Score = 436 bits (1121), Expect = e-122
Identities = 222/234 (94%), Positives = 225/234 (96%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAPNV ASEP E PKGIRAVLLGPPGAGKGTQAP+LAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPNVLASEP--EIPKGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGS 58
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETP CKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 59 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPSCKNGFLLDGFPRTVRQAEMLDDLMEKR 118
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSI D+LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD
Sbjct: 119 KEKLDSVIEFSIQDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 178
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS 765
NEKALK RLEAYHTQTTPLVEYY KRGIH AIDASQTPD+VFASILAAFSKATS
Sbjct: 179 NEKALKTRLEAYHTQTTPLVEYYRKRGIHCAIDASQTPDIVFASILAAFSKATS 232
>ref|NP_001029138.1| adenylate kinase 2, mitochondrial isoform a [Mus musculus].
Length = 239
Score = 434 bits (1117), Expect = e-122
Identities = 221/233 (94%), Positives = 224/233 (96%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAPNV ASEP E PKGIRAVLLGPPGAGKGTQAP+LAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPNVLASEP--EIPKGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGS 58
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETP CKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 59 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPSCKNGFLLDGFPRTVRQAEMLDDLMEKR 118
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSI D+LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD
Sbjct: 119 KEKLDSVIEFSIQDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 178
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKAT 762
NEKALK RLEAYHTQTTPLVEYY KRGIH AIDASQTPD+VFASILAAFSKAT
Sbjct: 179 NEKALKTRLEAYHTQTTPLVEYYRKRGIHCAIDASQTPDIVFASILAAFSKAT 231
>ref|NP_067274.1| GTP:AMP phosphotransferase, mitochondrial [Mus musculus].
Length = 227
Score = 170 bits (431), Expect = 3e-42
Identities = 86/200 (43%), Positives = 133/200 (66%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RAV++G PG+GKGT + R+ ++F + HL++GD+LR + G+E+G K +D GKL+
Sbjct: 8 LRAVIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRQNMLQGTEIGVLAKTFIDQGKLIP 67
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
D+++ L L+T + +LLDGFPRT+ QAE LD + + +D+VI ++P ++
Sbjct: 68 DDVMTRLALHELKTLT-QCSWLLDGFPRTLPQAEALDKVYQ-----IDTVINLNVPFEVI 121
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R+T R IHP SGR Y+ EFNPPK DD+TGEPLI+R DD + + RL+AY QT
Sbjct: 122 KQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEAQTE 181
Query: 655 PLVEYYSKRGIHSAIDASQT 714
P+++YY K+G+ ++T
Sbjct: 182 PVLQYYQKKGVLETFSGTET 201
>ref|NP_033777.1| adenylate kinase isoenzyme 4, mitochondrial [Mus musculus].
Length = 223
Score = 162 bits (410), Expect = 7e-40
Identities = 86/202 (42%), Positives = 127/202 (62%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G +LR + +G+E+G K ++ G L
Sbjct: 4 KLLRAVILGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LET ++ +LLDGFPRT+ QAE LD + + +D VI +IP
Sbjct: 64 VPDHVITRLMMSELETRSAQH-WLLDGFPRTLVQAEALDGICD-----VDLVISLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP+ DDITGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPSSGRVYNLDFNPPQVQGIDDITGEPLVQQEDDKPEAVAARLRRYKDA 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|NP_001171076.1| adenylate kinase isoenzyme 4, mitochondrial [Mus musculus].
Length = 223
Score = 162 bits (410), Expect = 7e-40
Identities = 86/202 (42%), Positives = 127/202 (62%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G +LR + +G+E+G K ++ G L
Sbjct: 4 KLLRAVILGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LET ++ +LLDGFPRT+ QAE LD + + +D VI +IP
Sbjct: 64 VPDHVITRLMMSELETRSAQH-WLLDGFPRTLVQAEALDGICD-----VDLVISLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP+ DDITGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPSSGRVYNLDFNPPQVQGIDDITGEPLVQQEDDKPEAVAARLRRYKDA 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|NP_001171075.1| adenylate kinase isoenzyme 4, mitochondrial [Mus musculus].
Length = 223
Score = 162 bits (410), Expect = 7e-40
Identities = 86/202 (42%), Positives = 127/202 (62%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G +LR + +G+E+G K ++ G L
Sbjct: 4 KLLRAVILGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LET ++ +LLDGFPRT+ QAE LD + + +D VI +IP
Sbjct: 64 VPDHVITRLMMSELETRSAQH-WLLDGFPRTLVQAEALDGICD-----VDLVISLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP+ DDITGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPSSGRVYNLDFNPPQVQGIDDITGEPLVQQEDDKPEAVAARLRRYKDA 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|NP_001171073.1| adenylate kinase isoenzyme 4, mitochondrial [Mus musculus].
Length = 223
Score = 162 bits (410), Expect = 7e-40
Identities = 86/202 (42%), Positives = 127/202 (62%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G +LR + +G+E+G K ++ G L
Sbjct: 4 KLLRAVILGPPGSGKGTVCERIAQNFGLQHLSSGHLLRENLKTGTEVGDVAKQYLEKGLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LET ++ +LLDGFPRT+ QAE LD + + +D VI +IP
Sbjct: 64 VPDHVITRLMMSELETRSAQH-WLLDGFPRTLVQAEALDGICD-----VDLVISLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP+ DDITGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPSSGRVYNLDFNPPQVQGIDDITGEPLVQQEDDKPEAVAARLRRYKDA 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|NP_067490.1| adenylate kinase isoenzyme 1 isoform 1 [Mus musculus].
Length = 210
Score = 117 bits (294), Expect = 2e-26
Identities = 78/228 (34%), Positives = 119/228 (52%), Gaps = 9/228 (3%)
Frame = +1
Query: 82 ASEPAQEG--------PKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVAS 237
+SEP +EG K ++G PG+GKGTQ ++ + + HL+TGD+LRA V+S
Sbjct: 6 SSEPQEEGGRKTGEKLKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSS 65
Query: 238 GSELGKKLKATMDAGKLVSDEMVVELI-EKNLETPPCKNGFLLDGFPRTVRQAEMLDDLM 414
GSE GKKL A M+ G+LV + V++++ + L NGFL+DG+PR V+Q E +
Sbjct: 66 GSERGKKLSAIMEKGELVPLDTVLDMLRDAMLAKVDSSNGFLIDGYPREVKQGEEFE--- 122
Query: 415 EKRKEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRR 594
+K+ DA +T RL+ + + +G R
Sbjct: 123 ----QKIGQPTLLLYVDA-GAETMTQRLL------------------KRGETSG-----R 154
Query: 595 SDDNEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASI 738
DDNE+ +K RLE Y+ T P++ +Y KRGI ++A T D VF+ +
Sbjct: 155 VDDNEETIKKRLETYYNATEPVISFYDKRGIVRKVNAEGTVDTVFSEV 202
>ref|NP_001185721.1| adenylate kinase isoenzyme 1 isoform 2 [Mus musculus].
Length = 194
Score = 115 bits (288), Expect = 1e-25
Identities = 72/205 (35%), Positives = 111/205 (54%), Gaps = 1/205 (0%)
Frame = +1
Query: 127 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV 306
++G PG+GKGTQ ++ + + HL+TGD+LRA V+SGSE GKKL A M+ G+LV + V
Sbjct: 13 VVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLSAIMEKGELVPLDTV 72
Query: 307 VELI-EKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALLIRR 483
++++ + L NGFL+DG+PR V+Q E + +K+ DA
Sbjct: 73 LDMLRDAMLAKVDSSNGFLIDGYPREVKQGEEFE-------QKIGQPTLLLYVDA-GAET 124
Query: 484 ITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTTPLV 663
+T RL+ + + +G R DDNE+ +K RLE Y+ T P++
Sbjct: 125 MTQRLL------------------KRGETSG-----RVDDNEETIKKRLETYYNATEPVI 161
Query: 664 EYYSKRGIHSAIDASQTPDVVFASI 738
+Y KRGI ++A T D VF+ +
Sbjct: 162 SFYDKRGIVRKVNAEGTVDTVFSEV 186
>ref|NP_001185720.1| adenylate kinase isoenzyme 1 isoform 2 [Mus musculus].
Length = 194
Score = 115 bits (288), Expect = 1e-25
Identities = 72/205 (35%), Positives = 111/205 (54%), Gaps = 1/205 (0%)
Frame = +1
Query: 127 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMV 306
++G PG+GKGTQ ++ + + HL+TGD+LRA V+SGSE GKKL A M+ G+LV + V
Sbjct: 13 VVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLSAIMEKGELVPLDTV 72
Query: 307 VELI-EKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALLIRR 483
++++ + L NGFL+DG+PR V+Q E + +K+ DA
Sbjct: 73 LDMLRDAMLAKVDSSNGFLIDGYPREVKQGEEFE-------QKIGQPTLLLYVDA-GAET 124
Query: 484 ITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTTPLV 663
+T RL+ + + +G R DDNE+ +K RLE Y+ T P++
Sbjct: 125 MTQRLL------------------KRGETSG-----RVDDNEETIKKRLETYYNATEPVI 161
Query: 664 EYYSKRGIHSAIDASQTPDVVFASI 738
+Y KRGI ++A T D VF+ +
Sbjct: 162 SFYDKRGIVRKVNAEGTVDTVFSEV 186
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 56,679,969
Number of extensions: 1608887
Number of successful extensions: 5505
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 5466
Number of HSP's successfully gapped: 25
Length of query: 539
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 433
Effective length of database: 12,433,743
Effective search space: 5383810719
Effective search space used: 5383810719
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007812
(1617 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_037543.1| adenylate kinase 2, mitochondrial isoform b [Ho... 439 e-123
Alignment gi|NP_001616.1| adenylate kinase 2, mitochondrial isoform a [Ho... 438 e-123
Alignment gi|NP_001186128.1| adenylate kinase 2, mitochondrial isoform c ... 417 e-116
Alignment gi|NP_001186783.1| GTP:AMP phosphotransferase, mitochondrial is... 170 3e-42
Alignment gi|NP_057366.2| GTP:AMP phosphotransferase, mitochondrial isofo... 170 3e-42
Alignment gi|XP_003119578.1| PREDICTED: adenylate kinase isoenzyme 4, mit... 154 2e-37
Alignment gi|NP_001005353.1| adenylate kinase isoenzyme 4, mitochondrial ... 154 2e-37
Alignment gi|NP_037542.1| adenylate kinase isoenzyme 4, mitochondrial iso... 154 2e-37
Alignment gi|NP_982289.1| adenylate kinase isoenzyme 4, mitochondrial iso... 154 2e-37
Alignment gi|NP_001186781.1| GTP:AMP phosphotransferase, mitochondrial is... 131 2e-30
>ref|NP_037543.1| adenylate kinase 2, mitochondrial isoform b [Homo sapiens].
Length = 232
Score = 439 bits (1130), Expect = e-123
Identities = 223/234 (95%), Positives = 228/234 (97%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAP+V A+EP E PKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPSVPAAEP--EYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 58
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETP CKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 59 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKR 118
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSIPD+LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD
Sbjct: 119 KEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 178
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS 765
NEKALKIRL+AYHTQTTPL+EYY KRGIHSAIDASQTPDVVFASILAAFSKATS
Sbjct: 179 NEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATS 232
>ref|NP_001616.1| adenylate kinase 2, mitochondrial isoform a [Homo sapiens].
Length = 239
Score = 438 bits (1126), Expect = e-123
Identities = 222/233 (95%), Positives = 227/233 (97%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAP+V A+EP E PKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPSVPAAEP--EYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 58
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETP CKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 59 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKR 118
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSIPD+LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD
Sbjct: 119 KEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 178
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKAT 762
NEKALKIRL+AYHTQTTPL+EYY KRGIHSAIDASQTPDVVFASILAAFSKAT
Sbjct: 179 NEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKAT 231
>ref|NP_001186128.1| adenylate kinase 2, mitochondrial isoform c [Homo sapiens].
Length = 224
Score = 417 bits (1073), Expect = e-116
Identities = 215/234 (91%), Positives = 220/234 (94%)
Frame = +1
Query: 64 MAPNVTASEPAQEGPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 243
MAP+V A+EP E PKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS
Sbjct: 1 MAPSVPAAEP--EYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGS 58
Query: 244 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKR 423
ELGKKLKATMDAGKLVSDEMVVELIEKNLETP CKNGFLLDGFPRTVRQAEMLDDLMEKR
Sbjct: 59 ELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKR 118
Query: 424 KEKLDSVIEFSIPDALLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 603
KEKLDSVIEFSIPD+L LIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD
Sbjct: 119 KEKLDSVIEFSIPDSL--------LIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 170
Query: 604 NEKALKIRLEAYHTQTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS 765
NEKALKIRL+AYHTQTTPL+EYY KRGIHSAIDASQTPDVVFASILAAFSKATS
Sbjct: 171 NEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATS 224
>ref|NP_001186783.1| GTP:AMP phosphotransferase, mitochondrial isoform a [Homo sapiens].
Length = 227
Score = 170 bits (431), Expect = 3e-42
Identities = 88/200 (44%), Positives = 132/200 (66%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RAV++G PG+GKGT + R+ +F + HL++GD+LR + G+E+G KA +D GKL+
Sbjct: 8 LRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFIDQGKLIP 67
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
D+++ L L+ + +LLDGFPRT+ QAE LD R ++D+VI ++P ++
Sbjct: 68 DDVMTRLALHELKNLT-QYSWLLDGFPRTLPQAEALD-----RAYQIDTVINLNVPFEVI 121
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R+T R IHP SGR Y+ EFNPPK DD+TGEPLI+R DD + + RL+AY QT
Sbjct: 122 KQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTK 181
Query: 655 PLVEYYSKRGIHSAIDASQT 714
P++EYY K+G+ ++T
Sbjct: 182 PVLEYYQKKGVLETFSGTET 201
>ref|NP_057366.2| GTP:AMP phosphotransferase, mitochondrial isoform a [Homo sapiens].
Length = 227
Score = 170 bits (431), Expect = 3e-42
Identities = 88/200 (44%), Positives = 132/200 (66%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RAV++G PG+GKGT + R+ +F + HL++GD+LR + G+E+G KA +D GKL+
Sbjct: 8 LRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFIDQGKLIP 67
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
D+++ L L+ + +LLDGFPRT+ QAE LD R ++D+VI ++P ++
Sbjct: 68 DDVMTRLALHELKNLT-QYSWLLDGFPRTLPQAEALD-----RAYQIDTVINLNVPFEVI 121
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R+T R IHP SGR Y+ EFNPPK DD+TGEPLI+R DD + + RL+AY QT
Sbjct: 122 KQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTK 181
Query: 655 PLVEYYSKRGIHSAIDASQT 714
P++EYY K+G+ ++T
Sbjct: 182 PVLEYYQKKGVLETFSGTET 201
>ref|XP_003119578.1| PREDICTED: adenylate kinase isoenzyme 4, mitochondrial-like [Homo
sapiens].
Length = 223
Score = 154 bits (389), Expect = 2e-37
Identities = 83/202 (41%), Positives = 123/202 (60%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G LR + + +E+G+ K ++ L
Sbjct: 4 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + E +D VI +IP
Sbjct: 64 VPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE-----VDLVISLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP DD+TGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDV 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|NP_001005353.1| adenylate kinase isoenzyme 4, mitochondrial isoform 5 [Homo
sapiens].
Length = 223
Score = 154 bits (389), Expect = 2e-37
Identities = 83/202 (41%), Positives = 123/202 (60%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G LR + + +E+G+ K ++ L
Sbjct: 4 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + E +D VI +IP
Sbjct: 64 VPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE-----VDLVISLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP DD+TGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDV 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|NP_037542.1| adenylate kinase isoenzyme 4, mitochondrial isoform 6 [Homo
sapiens].
Length = 223
Score = 154 bits (389), Expect = 2e-37
Identities = 83/202 (41%), Positives = 123/202 (60%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G LR + + +E+G+ K ++ L
Sbjct: 4 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + E +D VI +IP
Sbjct: 64 VPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE-----VDLVISLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP DD+TGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDV 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|NP_982289.1| adenylate kinase isoenzyme 4, mitochondrial isoform 7 [Homo
sapiens].
Length = 223
Score = 154 bits (389), Expect = 2e-37
Identities = 83/202 (41%), Positives = 123/202 (60%)
Frame = +1
Query: 109 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 288
K +RAV+LGPPG+GKGT R+A+NF + HL++G LR + + +E+G+ K ++ L
Sbjct: 4 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLL 63
Query: 289 VSDEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDA 468
V D ++ L+ LE ++ +LLDGFPRT+ QAE LD + E +D VI +IP
Sbjct: 64 VPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE-----VDLVISLNIPFE 117
Query: 469 LLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQ 648
L R++ R IHP SGR Y+ +FNPP DD+TGEPL+++ DD +A+ RL Y
Sbjct: 118 TLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDV 177
Query: 649 TTPLVEYYSKRGIHSAIDASQT 714
P++E Y RG+ ++T
Sbjct: 178 AKPVIELYKSRGVLHQFSGTET 199
>ref|NP_001186781.1| GTP:AMP phosphotransferase, mitochondrial isoform b [Homo sapiens].
Length = 187
Score = 131 bits (329), Expect = 2e-30
Identities = 74/200 (37%), Positives = 109/200 (54%)
Frame = +1
Query: 115 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 294
+RAV++G PG+GKGT + R+ +F + HL++GD+LR + G+
Sbjct: 8 LRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGT----------------- 50
Query: 295 DEMVVELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDALL 474
GFPRT+ QAE LD R ++D+VI ++P ++
Sbjct: 51 ------------------------GFPRTLPQAEALD-----RAYQIDTVINLNVPFEVI 81
Query: 475 IRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLEAYHTQTT 654
+R+T R IHP SGR Y+ EFNPPK DD+TGEPLI+R DD + + RL+AY QT
Sbjct: 82 KQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTK 141
Query: 655 PLVEYYSKRGIHSAIDASQT 714
P++EYY K+G+ ++T
Sbjct: 142 PVLEYYQKKGVLETFSGTET 161
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 67,023,925
Number of extensions: 1926193
Number of successful extensions: 6229
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 6192
Number of HSP's successfully gapped: 26
Length of query: 539
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 432
Effective length of database: 14,770,016
Effective search space: 6380646912
Effective search space used: 6380646912
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007812
(1617 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL894826.2| Sus scrofa unplaced genomic scaffold ChrUScaf2710 1540 0.0
Sscrofa_Chr03 1035 0.0
Sscrofa_Chr01 248 8e-63
Sscrofa_Chr15 232 5e-58
Sscrofa_Chr02 109 5e-21
>gb|GL894826.2| Sus scrofa unplaced genomic scaffold ChrUScaf2710
Length = 69852
Score = 1540 bits (777), Expect = 0.0
Identities = 833/855 (97%), Gaps = 1/855 (0%)
Strand = Plus / Plus
Query: 764 cctagtaacagaaggccaggcgagactgcaccactgctcatcaccccgcggcgtgattcc 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47000 cctagtaacagaaggccaggcgagactgcaccactgctcatcaccccgcggcgtgattcc 47059
Query: 824 tgctcttaggtgctgggcagaagggaggggtgtgcagggtaagggtggagagggaggagt 883
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 47060 tgctcttaggtgctgggcagaagggaggggtgcgcagggtaagggtggagagggaggagt 47119
Query: 884 gctgagggctcaagaggaggatgggaagagccccaggtggtagtgaagcgatttctttta 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47120 gctgagggctcaagaggaggatgggaagagccccaggtggtagtgaagcgatttctttta 47179
Query: 944 catagagtaggaatcttaaaaattagaagcaaagggaaaaattaattttttaaaacatgg 1003
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 47180 catagagtaggaatcttaaaaattagaaacaaagggaaaaattaattttttaaaacatgg 47239
Query: 1004 attggaaggtgtaagtagaaacagggagttgcagtattatttctaaggaatcatgttttc 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47240 attggaaggtgtaagtagaaacagggagttgcagtattatttctaaggaatcatgttttc 47299
Query: 1064 atgtactctggactggtgacaatgnnnnnnnaaagccagtgtcctaagacctcactttta 1123
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 47300 atgtactctggactggtgacaatgtttttttaaagccagtgtcctaagacctcactttta 47359
Query: 1124 tcagacctcatgccagcccaggaatgcaggccatcacactgctgtcctgtctgtcctgta 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47360 tcagacctcatgccagcccaggaatgcaggccatcacactgctgtcctgtctgtcctgta 47419
Query: 1184 gcttggaatagggcaggagccgactgctcaccctggttccccacactgtgagaccaagaa 1243
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47420 gcttggaacagggcaggagccgactgctcaccctggttccccacactgtgagaccaagaa 47479
Query: 1244 atcatctccgcatttgaaaaagatacgggtgttttcctggggccggtggctcagcaaatc 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47480 atcatctccgcatttgaaaaagatacgggtgttttcctggggccggtggctcagcaaatc 47539
Query: 1304 aggtttactggggtcatggggcaggaggggcaggctagtctcactcccttcctgactcac 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47540 aggtttactggggtcatggggcaggaggggcaggctagtctcactcccttcctgactcac 47599
Query: 1364 ctgcccacctgctctggcgggtaagctctctgccaccacccagcatgtgccacgatccta 1423
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 47600 ctgcccacctgctctggcgggtaatctctctgccaccacccagcatgtgccacgatccta 47659
Query: 1424 cactcttgccttcctccatccatgatgtgtgaagggactccttttaataaatgaacaagt 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47660 cactcttgccttcctccatccatgatgtgtgaagggactccttttaataaatgaacaagt 47719
Query: 1484 gtcctaagcaacattatccaaagatcgtcctttccatcctacaatcctgtgactgggatc 1543
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 47720 gtcctaagcaacattatccaaagatcgtcctttccatcctcaaatcctgtgactgggatc 47779
Query: 1544 actcgacagcactgtgatgtannnnnnnc-atgaggtgcctttcttaccggtccaaatgc 1602
||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 47780 actcgacagcactgtgatgtattattttcaatgaggtgcctttcttaccggtccaaatgc 47839
Query: 1603 tgccctgtttggccc 1617
|||| ||||||||||
Sbjct: 47840 tgccttgtttggccc 47854
Score = 389 bits (196), Expect = e-105
Identities = 196/196 (100%)
Strand = Plus / Plus
Query: 568 atcaccggggaacccttgatccgccgatcagatgataatgagaaggccttgaaaatccgc 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44377 atcaccggggaacccttgatccgccgatcagatgataatgagaaggccttgaaaatccgc 44436
Query: 628 ctggaggcctaccacactcagactaccccgctggtggaatactacagcaaacggggcatc 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44437 ctggaggcctaccacactcagactaccccgctggtggaatactacagcaaacggggcatc 44496
Query: 688 cactctgccatcgacgcatcccagacccctgatgtcgtgtttgcaagcatcctagcagcc 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44497 cactctgccatcgacgcatcccagacccctgatgtcgtgtttgcaagcatcctagcagcc 44556
Query: 748 ttctccaaagccacat 763
||||||||||||||||
Sbjct: 44557 ttctccaaagccacat 44572
Score = 260 bits (131), Expect = 2e-66
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 160 caggcacccagattggctgaaaacttctgcgtctgccatttggccactggggatatgttg 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36027 caggcacccagattggctgaaaacttctgcgtctgccatttggccactggggatatgttg 36086
Query: 220 agggccatggtggcttctggctcagagctgggaaaaaagctgaaggcaactatggatgct 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36087 agggccatggtggcttctggctcagagctgggaaaaaagctgaaggcaactatggatgct 36146
Query: 280 gggaaactggt 290
|||||||||||
Sbjct: 36147 gggaaactggt 36157
Score = 242 bits (122), Expect = 5e-61
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 3 ctggaaaccgtggagctgagaggtgtgctggagggttaagcagtgagagacttcggcggc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26601 ctggaaaccgtggagctgagaggtgtgctggagggttaagcagtgagagacttcggcggc 26660
Query: 63 catggctcccaacgtgaccgcctccgaaccggcccaagagggtcctaaaggcatccgggc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26661 catggctcccaacgtgaccgcctccgaaccggcccaagagggtcctaaaggcatccgggc 26720
Query: 123 cg 124
||
Sbjct: 26721 cg 26722
Score = 222 bits (112), Expect = 5e-55
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 288 ggtgagtgatgagatggtcgtggagctcattgagaagaatttggagacccctccatgcaa 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37880 ggtgagtgatgagatggtcgtggagctcattgagaagaatttggagacccctccatgcaa 37939
Query: 348 aaatggttttctccttgatggcttccctcggaccgtgaggcaggcggaaatg 399
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37940 aaatggttttctccttgatggcttccctcggaccgtgaggcaggcggaaatg 37991
Score = 190 bits (96), Expect = 2e-45
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 399 gcttgatgacctcatggagaagaggaaagagaagctcgattctgtgattgaattcagcat 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38119 gcttgatgacctcatggagaagaggaaagagaagctcgattctgtgattgaattcagcat 38178
Query: 459 cccagacgctctgctgatccggagaatcacaggaag 494
||||||||||||||||||||||||||||||||||||
Sbjct: 38179 cccagacgctctgctgatccggagaatcacaggaag 38214
Score = 149 bits (75), Expect = 6e-33
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 493 agactgattcaccccaagagtggccgttcctaccatgaggagttcaaccccccgaaggag 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43156 agactgattcaccccaagagtggccgttcctaccatgaggagttcaaccccccgaaggag 43215
Query: 553 cccatgaaagatgac 567
|||||||||||||||
Sbjct: 43216 cccatgaaagatgac 43230
>Sscrofa_Chr03
|| Length = 144787322
Score = 1035 bits (522), Expect = 0.0
Identities = 787/869 (90%), Gaps = 6/869 (0%)
Strand = Plus / Plus
Query: 95 cccaagagggtcctaaaggcatccgggccgtgctgctggggccgcccggggccggcaaag 154
||||||||||||| ||| |||||| ||| ||| ||||||||| ||| ||||| || ||||
Sbjct: 107835087 cccaagagggtcccaaatgcatccaggctgtgttgctggggcagcctggggctggtaaag 107835146
Query: 155 gtactcaggcaccc-agattggctgaaaacttctgcgtctgccatttggccactggggat 213
|||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 107835147 gtactcaggcaccccagattggctgaaaacttctgtgtctgtcatttggccactggggac 107835206
Query: 214 atgttgagggccatggtggcttctggctcagagctgggaaaaaagctgaaggcaactatg 273
||| ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 107835207 atgctgagggccatggtagcttctcgctcagagctgggaaaaaagctgaagtcaactatg 107835266
Query: 274 gatgctgggaaactggtgagtgatgagatggtcgtggagctcattgagaagaatttggag 333
|||||||||||||||||||| |||| ||| || |||||||||||| |||||||||||||
Sbjct: 107835267 gatgctgggaaactggtgagcaatgaaatg-tcatggagctcattgggaagaatttggag 107835325
Query: 334 acccctccatgcaaaaatggttttctccttgatggcttccctcggaccgtgaggcaggcg 393
||||||||||||||||||||||||| | | |||| ||||| |||| ||||| |||||
Sbjct: 107835326 gcccctccatgcaaaaatggttttcttccaggtggcatcccttggactgtgag-caggca 107835384
Query: 394 gaaatgcttgatgacctcatggagaagaggaaagagaagctcgattctgtgattgaattc 453
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 107835385 gaaatgcttgatgacctcatggagaagaggaaagagaagcttgattctgtgactgaattc 107835444
Query: 454 agcatcccagacgctctgctgatccggagaatcacaggaagactgattcaccccaagagt 513
|||||| ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 107835445 agcatctcagactctctgctgatccagagaatcacaggaagactgattcgccccaagagt 107835504
Query: 514 ggccgttcctaccatgaggagttcaaccccccgaaggagcccatgaaagatgacatcacc 573
|||| ||||||||| |||||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 107835505 ggccattcctaccacgaggagttcaactccacgaaggagcccatgaaagaggacatcact 107835564
Query: 574 ggggaacccttgatccgccgatcagatgataatgagaaggccttgaaaatccgcctggag 633
||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 107835565 ggggaacccttgaatcgccagtcagatgataatgagaaggccttgaaaatccacctggag 107835624
Query: 634 gcctaccacactcagactaccccgctggtggaatactacagcaaacggggcatccactct 693
||||| ||||||||||| ||||| |||| ||| |||||||| |||| |||||||||||||
Sbjct: 107835625 gcctatcacactcagacaaccccactggcggagtactacagtaaacagggcatccactct 107835684
Query: 694 gccatcgacgcatcccagacccctgatgtcgtgtttgcaagcatcctagcagccttctcc 753
|||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 107835685 gccatcaacacatcccagacccctgatgtcttgtttgcaagcatcctagcagccttctcc 107835744
Query: 754 aaagccacatcctagtaacagaaggccaggcgagactgcaccactgctcatcaccccgcg 813
||||||||||||| |||||||||||||||| ||| ||| |||||||||||||| ||| ||
Sbjct: 107835745 aaagccacatcctggtaacagaaggccaggggaggctgtaccactgctcatca-cccacg 107835803
Query: 814 gcgtgattcctgctcttaggtgctgggcagaagggaggggtgtgcagggtaagggtggag 873
| ||||| || |||||||||||||||||||| |||||||||| |||||||||| |||||
Sbjct: 107835804 gtgtgatcccagctcttaggtgctgggcagaggggaggggtgatcagggtaaggatggag 107835863
Query: 874 agggaggagtgctgagggctcaagaggaggatgggaagagccccag--gtggtagtgaag 931
||||||||||| ||| ||||| |||||||| ||||||||||||||| ||||||||||||
Sbjct: 107835864 agggaggagtggtgaaggctccagaggagggtgggaagagccccaggtgtggtagtgaag 107835923
Query: 932 cgatttcttttacatagagtaggaatctt 960
|||||||||||| |||||||||| ||||
Sbjct: 107835924 cgatttcttttatgtagagtaggagtctt 107835952
Score = 192 bits (97), Expect = 4e-46
Identities = 296/361 (81%), Gaps = 19/361 (5%)
Strand = Plus / Plus
Query: 947 agagtaggaatcttaaaaattagaagcaaagggaaaaattaattttttaaaacatggatt 1006
||||||||||| |||||||||| | |||||||||||||||||||||||||| | ||||
Sbjct: 107836224 agagtaggaattttaaaaattaagaacaaagggaaaaattaattttttaaaatactgatt 107836283
Query: 1007 ggaaggtgtaagtagaaacagggagttgcagtattatttctaaggaatcatgttttcatg 1066
| | ||| |||||| |||||||||| |||||| || |||||||||||||| |||||||
Sbjct: 107836284 gaagggtataagtaaaaacagggagatgcagt-ttctttctaaggaatcacattttcatt 107836342
Query: 1067 tactc------tggactggtgacaatgnnnnnnnaaagccagtgtcctaagacctcactt 1120
||||| ||||||||| ||||| |||||||||| |||||||||||||||
Sbjct: 107836343 tactctggacttggactggtcacaat-attttttaaagccagtgccctaagacctcactt 107836401
Query: 1121 ttatca-gacctcatgccagcccaggaatgcaggccatcacactgctgtcctgtctgtcc 1179
|||||| | || ||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 107836402 ttatcataatcttatgccagcccagggatgcaggaaatcacactg---------ctgtcc 107836452
Query: 1180 tgtagcttggaatagggcaggagccgactgctcaccctggttccccacactgtgagacca 1239
||||||||| || ||||||||||| ||||||| |||||||||||||| ||| ||||| ||
Sbjct: 107836453 tgtagcttgaaacagggcaggagctgactgctaaccctggttccccatactttgagatca 107836512
Query: 1240 agaaatcatctccgcatttgaaaaagatacgg-gtgttttcctggggccggtggctcagc 1298
||||||||||||| | ||||||| | ||| || |||| ||||||||| |||||| |||||
Sbjct: 107836513 agaaatcatctccacgtttgaaagatatagggagtgtgttcctgggggcggtggttcagc 107836572
Query: 1299 a 1299
|
Sbjct: 107836573 a 107836573
Score = 165 bits (83), Expect = 9e-38
Identities = 140/159 (88%)
Strand = Plus / Plus
Query: 1395 gccaccacccagcatgtgccacgatcctacactcttgccttcctccatccatgatgtgtg 1454
|||| ||||||||| ||||||| |||||||||||||||||| |||||||| |||||||
Sbjct: 107836626 gccaacacccagcacatgccacggtcctacactcttgccttcttccatccacaatgtgtg 107836685
Query: 1455 aagggactccttttaataaatgaacaagtgtcctaagcaacattatccaaagatcgtcct 1514
||||||||| || ||||||||||||||||||||||||||| | ||| |||| || |||||
Sbjct: 107836686 aagggactctttctaataaatgaacaagtgtcctaagcaatactattcaaacattgtcct 107836745
Query: 1515 ttccatcctacaatcctgtgactgggatcactcgacagc 1553
||| ||||| |||||||||||| ||||||||| |||||
Sbjct: 107836746 ttctatcctcaaatcctgtgactaggatcactcaacagc 107836784
>Sscrofa_Chr01
|| Length = 315321322
Score = 248 bits (125), Expect = 8e-63
Identities = 301/353 (85%), Gaps = 5/353 (1%)
Strand = Plus / Minus
Query: 737 tcctagcagccttctccaaagccacatcctagtaacagaaggccaggcgagactgcacca 796
|||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||| |
Sbjct: 79493288 tcctagcacccttctccaaaaccacatcctagtcacagaaggccaggtaagactgcac-a 79493230
Query: 797 ctgctcatcaccccgcggcgtgattcc-tgctcttaggtgctgggcagaagggaggggtg 855
||||| |||| || || |||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 79493229 ctgcttatcatccaatggtgtgattccctgctcctaggtgctgggcagaggggaggggtt 79493170
Query: 856 tgcagggtaagggtggagagggaggagtgctgagggctcaagaggaggatgggaagag-c 914
| || |||| | |||||||| | |||| |||||||||||||||||||||||||||| |
Sbjct: 79493169 ttcacggtatagatggagaggaaagagtagtgagggctcaagaggaggatgggaagagac 79493110
Query: 915 cccagg-tggtagtgaagcgatttcttttacatagagtaggaatcttaaaaattagaagc 973
||||| | | ||||||| | |||||| ||||||||||| || ||||||||||| ||||
Sbjct: 79493109 cccagtattgcagtgaagtaacttctttcacatagagtagtaaccttaaaaattataagc 79493050
Query: 974 aaagggaaaaattaattttttaaaacatggattggaaggtgtaagtagaaacagggagtt 1033
|||||||||| ||||||||| ||||||| || || | ||| ||| |||||||||||| |
Sbjct: 79493049 aaagggaaaa-ttaatttttaaaaacattgactgaagggtataaacagaaacagggagat 79492991
Query: 1034 gcagtattatttctaaggaatcatgttttcatgtactctggactggtgacaat 1086
||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 79492990 agagtattatttctaaggaatcacattttcatttactctggactggtgacaat 79492938
>Sscrofa_Chr15
|| Length = 157681621
Score = 232 bits (117), Expect = 5e-58
Identities = 289/347 (83%), Gaps = 10/347 (2%)
Strand = Plus / Plus
Query: 1272 gtgttttcctggggccggtggctcagcaaatcaggtttactggggtcatggggcaggagg 1331
|||| ||||||||| | ||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 104352692 gtgtgttcctgggggcagtggctcagcaaatcaggttttctggagtcctggggcaggagg 104352751
Query: 1332 ggcaggctagtctcactcccttcctgactcacctgcccacctgctctggcgggtaagctc 1391
||| |||| ||||||||||||||| | || ||| ||||||||||||||| ||||||| ||
Sbjct: 104352752 ggctggctggtctcactcccttcccggcttaccagcccacctgctctggtgggtaagttc 104352811
Query: 1392 tctgccaccacccagcatgtgccacgatcctacactcttgccttcctccatccatgatgt 1451
| || ||||||||||| ||||||| ||||||||||||||||||||||||| ||| |
Sbjct: 104352812 ttatccgccacccagcatctgccacggtcctacactcttgccttcctccatctgtga-ct 104352870
Query: 1452 gtgaagggactccttttaataaatgaacaagtgtcctaagcaacattatccaaagatcgt 1511
||||||||| | |||| |||||||| |||||||| |||||||||||||| ||
Sbjct: 104352871 atgaagggacactttttgataaatga--------cctaagcaccattatccaaagattgt 104352922
Query: 1512 cctttccatcctacaatcctgtgactgggatcactcgacagcactgtgatgtannnnnnn 1571
|||||| | || ||||||||||||||| ||||||||||||||| |||||||
Sbjct: 104352923 cctttctgtgctcaaatcctgtgactgggttcactcgacagcactctgatgtattatttt 104352982
Query: 1572 c-atgaggtgcctttcttaccggtccaaatgctgccctgtttggccc 1617
| ||||||||| ||||||||| |||||||||||| | ||||| ||||
Sbjct: 104352983 caatgaggtgcttttcttacctgtccaaatgctgtcttgtttagccc 104353029
>Sscrofa_Chr02
|| Length = 162569375
Score = 109 bits (55), Expect = 5e-21
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 1366 gcccacctgctctggcgggtaagctctctgccaccacccagcatgtgccacgatcctaca 1425
|||||||| |||| | |||||| ||||| ||||||||||||||| ||||||| |||||||
Sbjct: 11472367 gcccacctactctagtgggtaaactctcggccaccacccagcatatgccacggtcctaca 11472308
Query: 1426 ctcttgccttcctccatccatgatgtgtgaagggactccttttaataaatg 1476
|||||||||||| ||| |||||| |||||| |||| | ||||||||||||
Sbjct: 11472307 ctcttgccttcccccaaccatgacatgtgaaaggaccctttttaataaatg 11472257
Score = 93.7 bits (47), Expect = 3e-16
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 1465 ttttaataaatgaacaagtgtcctaagcaacattatccaaagatcgtcctttccatccta 1524
|||||| ||||||||||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 11472045 ttttaacaaatgaacaagcgtcctaagcaacattatccaaagattgtccttcccatcctc 11471986
Query: 1525 caatcctgtgactgggatcactc 1547
||||||||| | |||||||||
Sbjct: 11471985 agatcctgtgattaggatcactc 11471963
Score = 85.7 bits (43), Expect = 7e-14
Identities = 194/240 (80%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 973 caaagggaaaaattaattttttaaaacatggattggaaggtgtaagtagaaacagggagt 1032
||||||||||||||||||||| |||||| ||||||| || || ||| ||| ||||||
Sbjct: 11472954 caaagggaaaaattaatttttaaaaacactgattggagggcataggta-aaagagggagg 11472896
Query: 1033 tgcagtattatttctaaggaatcatgttttcatgtactctggactggtgacaatgnnnnn 1092
||| ||||||||||||||||||| |||||||| |||||| || |||| |||||
Sbjct: 11472895 tgccatattatttctaaggaatcacgttttcatttactct-gaatggtaacaat-atttt 11472838
Query: 1093 nnaaagccagtgtcctaagacctcacttttatcag-acctcatgccagcccaggaatgca 1151
||||| | | | ||||| ||||||||||||| | |||||||||||| |||||||||
Sbjct: 11472837 ttaaagctggggccttaaga-gtcacttttatcagaagctcatgccagcctaggaatgca 11472779
Query: 1152 ggccatcacactgctgtcctgtctgtcctgtagcttggaatagggcaggagccgactgct 1211
|| || ||||| | |||||||||||||| ||| || || ||||||||||| |||||||
Sbjct: 11472778 ggaaatggcactgttatcctgtctgtcctgcagcatgaaaaagggcaggagctgactgct 11472719
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 50,614,763
Number of extensions: 511
Number of successful extensions: 511
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 499
Number of HSP's successfully gapped: 21
Length of query: 1617
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1595
Effective length of database: 2,808,408,574
Effective search space: 4479411675530
Effective search space used: 4479411675530
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)