Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007814
(748 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_803482.1| glutathione S-transferase P [Bos taurus]. 375 e-104
Alignment gi|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-l... 331 5e-91
Alignment gi|XP_604297.3| PREDICTED: glutathione S-transferase, pi 1-like... 331 5e-91
Alignment gi|NP_787019.1| glutathione S-transferase Mu 1 [Bos taurus]. 109 2e-24
Alignment gi|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus]. 108 5e-24
Alignment gi|NP_001073823.1| glutathione S-transferase mu 1 [Bos taurus]. 105 4e-23
Alignment gi|NP_001071617.1| glutathione S-transferase A1 [Bos taurus]. 103 2e-22
Alignment gi|NP_001077241.1| glutathione S-transferase mu 1 [Bos taurus]. 103 2e-22
Alignment gi|NP_001092486.1| glutathione S-transferase A5 [Bos taurus]. 99 3e-21
Alignment gi|NP_001070580.1| glutathione S-transferase A4 [Bos taurus]. 97 1e-20
>ref|NP_803482.1| glutathione S-transferase P [Bos taurus].
Length = 210
Score = 375 bits (962), Expect = e-104
Identities = 181/210 (86%), Positives = 196/210 (93%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETW--PPLKPSCLFRQLPKFQDGD 210
MPPYTI YFPV+GRCEAMRMLLADQ QSWKEEVV M++W PLK SCL+ QLPKFQDGD
Sbjct: 1 MPPYTIVYFPVQGRCEAMRMLLADQGQSWKEEVVAMQSWLQGPLKASCLYGQLPKFQDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGR+ GLYGKDQ+EAALVDMVNDGVEDLRCKY +LIYTNYEAGKE YV
Sbjct: 61 LTLYQSNAILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYVSLIYTNYEAGKEDYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP+HLKPFETLLSQN+GGQAF+VG QISFADYNLLDLLRIHQVL PSCLD+FPLLSAY
Sbjct: 121 KALPQHLKPFETLLSQNKGGQAFIVGDQISFADYNLLDLLRIHQVLAPSCLDSFPLLSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
VARL++RPK+KAFLASPEH+NRPINGNGKQ
Sbjct: 181 VARLNSRPKLKAFLASPEHMNRPINGNGKQ 210
>ref|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 331 bits (848), Expect = 5e-91
Identities = 166/209 (79%), Positives = 180/209 (86%), Gaps = 2/209 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETW--PPLKPSCLFRQLPKFQDGD 210
+PPYTI YFP RGRCEA+RMLLADQDQSWKEEVVT E+W PLK SCL+ QLPKFQDGD
Sbjct: 22 VPPYTIVYFPTRGRCEALRMLLADQDQSWKEEVVTKESWLQGPLKASCLYGQLPKFQDGD 81
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGRSFGLYG D++EAALVDMVNDG+EDLR LI+ E K +YV
Sbjct: 82 LTLYQSNAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLIHHKREEDKAQYV 141
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
+ELP HL+PFETLLSQNQGGQAF+VG QISFADYNLLDLL HQVL P CLD FPLLSAY
Sbjct: 142 QELPVHLQPFETLLSQNQGGQAFIVGDQISFADYNLLDLLLNHQVLVPGCLDPFPLLSAY 201
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGK 657
VARLSARPK+KAFLASPEHVNRPI G+ K
Sbjct: 202 VARLSARPKLKAFLASPEHVNRPIFGSRK 230
>ref|XP_604297.3| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 331 bits (848), Expect = 5e-91
Identities = 166/209 (79%), Positives = 180/209 (86%), Gaps = 2/209 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETW--PPLKPSCLFRQLPKFQDGD 210
+PPYTI YFP RGRCEA+RMLLADQDQSWKEEVVT E+W PLK SCL+ QLPKFQDGD
Sbjct: 22 VPPYTIVYFPTRGRCEALRMLLADQDQSWKEEVVTKESWLQGPLKASCLYGQLPKFQDGD 81
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGRSFGLYG D++EAALVDMVNDG+EDLR LI+ E K +YV
Sbjct: 82 LTLYQSNAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLIHHKREEDKAQYV 141
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
+ELP HL+PFETLLSQNQGGQAF+VG QISFADYNLLDLL HQVL P CLD FPLLSAY
Sbjct: 142 QELPVHLQPFETLLSQNQGGQAFIVGDQISFADYNLLDLLLNHQVLVPGCLDPFPLLSAY 201
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGK 657
VARLSARPK+KAFLASPEHVNRPI G+ K
Sbjct: 202 VARLSARPKLKAFLASPEHVNRPIFGSRK 230
>ref|NP_787019.1| glutathione S-transferase Mu 1 [Bos taurus].
Length = 218
Score = 109 bits (273), Expect = 2e-24
Identities = 65/211 (30%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLP 192
P + Y+ +RG A+R+LL D +++E ++ P K F LP
Sbjct: 2 PMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLNEKFKLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG L QSNAILR++ R L G+ ++E VD++ + V D+R A + Y+ ++E
Sbjct: 62 YLIDGTHKLTQSNAILRYIARKHNLCGETEEEMIRVDILENQVMDVRLAMARICYSPDFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K ++KE+PE +K F L G + + G ++++ D+ + D+L +H++ P CLDA
Sbjct: 122 KLKPGFLKEIPEKIKLFSEFL----GKRPWFAGDKLTYVDFLVYDVLDMHRIFEPKCLDA 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPEHVNRPI 642
FP L +++R KI A++ S + P+
Sbjct: 178 FPNLKDFISRFEGLKKISAYMKSSRFLPGPL 208
>ref|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus].
Length = 225
Score = 108 bits (270), Expect = 5e-24
Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLPKFQDG 207
Y+ +RG A+RMLL D S++E+ T P K F LP DG
Sbjct: 11 YWDIRGLAHAIRMLLEFTDTSYEEKRYTCGEAPDYDKSQWLDVKFKLDLDFPNLPYLMDG 70
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYEAGKEK 384
L QSNAILR++ R + G ++E VD++ + + D R + L Y ++E K +
Sbjct: 71 KNRLTQSNAILRYIARKHNMCGDTEEERIRVDIMENQIMDFRMQLVQLCYNPDHEKLKPR 130
Query: 385 YVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLS 564
Y+++LP LK F L G ++ G +++F D+ D+L +++ P CLD FP L
Sbjct: 131 YLEQLPGQLKQFSLFL----GKYSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNLK 186
Query: 565 AYVARLSARPKIKAFLASPEHVNRPINGNGKQ*G 666
A++ R A KI ++ S + P+N Q G
Sbjct: 187 AFMCRFEALEKIATYMQSDRFLKMPVNNKMAQWG 220
>ref|NP_001073823.1| glutathione S-transferase mu 1 [Bos taurus].
Length = 218
Score = 105 bits (262), Expect = 4e-23
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 11/209 (5%)
Frame = +1
Query: 49 TITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLPKF 198
T+ Y+ +RG A+R+LL D +++E+ TM P K F LP
Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTDSNYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYL 63
Query: 199 QDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYEAG 375
DG L QS AILR++ R + G+ ++E VD++ + D + A L Y +E
Sbjct: 64 IDGAHRLTQSKAILRYIARKHNMCGETEEEKIRVDVLENQTMDTANELAILCYNPEFEKL 123
Query: 376 KEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFP 555
K +Y+KE+P +K L S+ G + + G +++F D+ + D+L IH++ P CLDAFP
Sbjct: 124 KSQYLKEIPGKMK----LYSEFLGRRPWFAGDKLTFVDFLVYDVLDIHRIFEPKCLDAFP 179
Query: 556 LLSAYVARLSARPKIKAFLASPEHVNRPI 642
L +++ +I A++ S + P+
Sbjct: 180 NLKDFISHFEGLKRISAYMKSSRFLPHPV 208
>ref|NP_001071617.1| glutathione S-transferase A1 [Bos taurus].
Length = 222
Score = 103 bits (257), Expect = 2e-22
Identities = 72/195 (36%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Frame = +1
Query: 49 TITYFPVRGRCEAMRMLLADQDQSWKEEVVTM-ETWPPLKP--SCLFRQLPKFQDGDLTL 219
T+ YF RGR E +R LLA ++E+ + E LK S +F+Q+P + + L
Sbjct: 6 TLHYFNGRGRMECIRWLLAAAGVEFEEKFIEKPEDLDKLKNDGSLMFQQVPMVEIDGMKL 65
Query: 220 YQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDL--RCKYATLIYTNYEAGKEKYVK 393
Q+ AIL ++ + LYGKD KE AL+DM ++GV DL + L + K ++
Sbjct: 66 VQTRAILNYIATKYNLYGKDMKERALIDMYSEGVADLGEMIMHFPLCPPAEKDAKLTLIR 125
Query: 394 E--LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSA 567
E +L FE +L + GQ ++VG+++S AD +L++LL + L+PS L FPLL A
Sbjct: 126 EKTTNRYLPAFENVLKSH--GQDYLVGNKLSRADIHLVELLYYVEELDPSLLANFPLLKA 183
Query: 568 YVARLSARPKIKAFL 612
AR+S P +K FL
Sbjct: 184 LKARVSNIPAVKKFL 198
>ref|NP_001077241.1| glutathione S-transferase mu 1 [Bos taurus].
Length = 218
Score = 103 bits (256), Expect = 2e-22
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 11/211 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPLKPSCL----------FRQLP 192
P + Y+ +RG A+R+LL D +++E+ TM P S F LP
Sbjct: 2 PMILGYWDIRGLAHAIRLLLEYTDSNYEEKKYTMGDAPDYDRSQWLSEKFTLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG L QSNAILR++ R + G+ ++E VD++ + D+R A + Y+ ++E
Sbjct: 62 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQTMDVRLHMARICYSPDFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K ++KE+PE +K F L++ + + G ++++ D+ D+L H++ P+CLD
Sbjct: 122 TLKPGFLKEIPEKMKLFSDFLAK----RPWFAGDKLTYVDFLAYDVLDRHRIFEPTCLDE 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPEHVNRPI 642
FP L ++ R +I A++ S P+
Sbjct: 178 FPNLKDFITRFEGLKRISAYMKSSRFHPNPM 208
>ref|NP_001092486.1| glutathione S-transferase A5 [Bos taurus].
Length = 222
Score = 99.4 bits (246), Expect = 3e-21
Identities = 68/192 (35%), Positives = 107/192 (55%), Gaps = 7/192 (3%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVV-TMETWPPLK--PSCLFRQLPKFQDGDLTLYQS 228
YF RGR EA+R LLA ++E+++ + E L+ S +F+Q+P + + L Q+
Sbjct: 9 YFDARGRMEAIRWLLAAAGAEFEEKLIESSEDLDKLRYDGSLVFQQVPMVEIDGMKLVQT 68
Query: 229 NAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDL--RCKYATLIYTNYEAGKEKYVKE-- 396
AIL ++ + LYGKD KE AL+DM +GV DL L + + K ++E
Sbjct: 69 RAILNYIATKYDLYGKDMKERALIDMYTEGVADLGEMIMLLPLCPPDQKNTKLTLIQERA 128
Query: 397 LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
+L FE +L ++ Q ++VG+++S AD +L++LL + L+PS L FPLL
Sbjct: 129 TNRYLPAFENVLKSHR--QDYLVGNKLSKADIHLVELLYYVEELDPSLLANFPLLKGLKT 186
Query: 577 RLSARPKIKAFL 612
R+S P +K FL
Sbjct: 187 RVSNLPAVKKFL 198
>ref|NP_001070580.1| glutathione S-transferase A4 [Bos taurus].
Length = 222
Score = 97.1 bits (240), Expect = 1e-20
Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVV-TMETWPPLKPS--CLFRQLPKFQDGDLTLYQS 228
YF RGR E++R LLA ++EE + T E + L+ LF Q+P + + L Q+
Sbjct: 9 YFHGRGRMESIRWLLAAAGVEFEEEFLETREQYEKLQKDGRLLFGQVPLVEIDGMELTQT 68
Query: 229 NAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV----KE 396
AIL +L + L+GKD KE +DM DG DL A + + E +E K
Sbjct: 69 RAILSYLAAKYNLHGKDLKETVRIDMYADGTLDLMLMVALAAFKHPEEKEESLALAVKKA 128
Query: 397 LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
+ FE +L + G+ F+VG++ S+AD LL+++ + L+ S L FPLL +
Sbjct: 129 KTRYFPVFEKILKDH--GEDFLVGNKFSWADIQLLEVILTMEELDASVLSDFPLLKEFKT 186
Query: 577 RLSARPKIKAFL 612
R+S P IK FL
Sbjct: 187 RISNIPTIKKFL 198
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 23,357,311
Number of extensions: 668163
Number of successful extensions: 5144
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 4931
Number of HSP's successfully gapped: 17
Length of query: 249
Length of database: 17,681,374
Length adjustment: 100
Effective length of query: 149
Effective length of database: 14,372,574
Effective search space: 2141513526
Effective search space used: 2141513526
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007814
(748 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537961.2| PREDICTED: similar to Glutathione S-transferase... 378 e-105
Alignment gi|XP_533213.2| PREDICTED: similar to Glutathione S-transferase... 378 e-105
Alignment gi|XP_532423.2| PREDICTED: similar to Glutathione S-transferase... 371 e-103
Alignment gi|XP_854117.1| PREDICTED: similar to Glutathione S-transferase... 365 e-101
Alignment gi|XP_537776.1| PREDICTED: similar to Glutathione S-transferase... 356 1e-98
Alignment gi|XP_533214.1| PREDICTED: similar to glutathione S-transferase... 332 2e-91
Alignment gi|XP_853726.1| PREDICTED: similar to Glutathione S-transferase... 311 3e-85
Alignment gi|XP_855066.1| PREDICTED: similar to glutathione S-transferase... 249 1e-66
Alignment gi|XP_854548.1| PREDICTED: similar to Glutathione S-transferase... 207 1e-53
Alignment gi|XP_544987.2| PREDICTED: similar to Glutathione S-transferase... 154 8e-38
>ref|XP_537961.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 231
Score = 378 bits (971), Expect = e-105
Identities = 186/211 (88%), Positives = 198/211 (93%), Gaps = 2/211 (0%)
Frame = +1
Query: 34 TMPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDG 207
TMPPYTITYFPVRGRCEAMRMLLADQ QSWKEEVVTMETW LK SCL+ QLPKFQDG
Sbjct: 21 TMPPYTITYFPVRGRCEAMRMLLADQGQSWKEEVVTMETWMKGSLKASCLYGQLPKFQDG 80
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKY 387
DLTLYQSNAILRHLGRS GLYGKDQ+EAAL+D+VNDGVEDLRCKYA LIYTNYEAGKE+Y
Sbjct: 81 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYTNYEAGKEEY 140
Query: 388 VKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSA 567
VK LP +LKPFETLLSQN+GGQAF+VG+QISFADYNLLDLL IHQVL PSCLD+FPLLSA
Sbjct: 141 VKALPGYLKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLSA 200
Query: 568 YVARLSARPKIKAFLASPEHVNRPINGNGKQ 660
YVARLSARPK+KAFL+SPEHVNRPINGNGKQ
Sbjct: 201 YVARLSARPKLKAFLSSPEHVNRPINGNGKQ 231
>ref|XP_533213.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 317
Score = 378 bits (971), Expect = e-105
Identities = 186/211 (88%), Positives = 198/211 (93%), Gaps = 2/211 (0%)
Frame = +1
Query: 34 TMPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDG 207
TMPPYTITYFPVRGRCEAMRMLLADQ QSWKEEVVTMETW LK SCL+ QLPKFQDG
Sbjct: 107 TMPPYTITYFPVRGRCEAMRMLLADQGQSWKEEVVTMETWMKGSLKASCLYGQLPKFQDG 166
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKY 387
DLTLYQSNAILRHLGRS GLYGKDQ+EAAL+D+VNDGVEDLRCKYA LIYTNYEAGKE+Y
Sbjct: 167 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYTNYEAGKEEY 226
Query: 388 VKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSA 567
VK LP +LKPFETLLSQN+GGQAF+VG+QISFADYNLLDLL IHQVL PSCLD+FPLLSA
Sbjct: 227 VKALPGYLKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLSA 286
Query: 568 YVARLSARPKIKAFLASPEHVNRPINGNGKQ 660
YVARLSARPK+KAFL+SPEHVNRPINGNGKQ
Sbjct: 287 YVARLSARPKLKAFLSSPEHVNRPINGNGKQ 317
>ref|XP_532423.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 210
Score = 371 bits (953), Expect = e-103
Identities = 183/210 (87%), Positives = 195/210 (92%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTITYFPVRGRCEAMRMLLADQ QSWKEEVVTMETW LK SCL+ QLPKFQDGD
Sbjct: 1 MPPYTITYFPVRGRCEAMRMLLADQSQSWKEEVVTMETWMKGSLKASCLYGQLPKFQDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGRS GLYGKDQ+EAAL+D+VNDGVEDLRCKYA LIYTNYEAGKE+YV
Sbjct: 61 LTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYTNYEAGKEEYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP +LKPFE LLSQN+GGQAF+VG+QISFADYNLLDLL IHQVL PSCLD+FPLLSAY
Sbjct: 121 KALPGYLKPFEKLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
VA LSARPK+KAFL+SPEHVNRPINGNGKQ
Sbjct: 181 VACLSARPKLKAFLSSPEHVNRPINGNGKQ 210
>ref|XP_854117.1| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 318
Score = 365 bits (938), Expect = e-101
Identities = 181/211 (85%), Positives = 192/211 (90%), Gaps = 2/211 (0%)
Frame = +1
Query: 34 TMPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWP--PLKPSCLFRQLPKFQDG 207
T PPYTI YFPVRGRCEAM MLLADQ QSWKEEVVTMETW LK SCL+ QLPKFQDG
Sbjct: 108 TRPPYTIIYFPVRGRCEAMHMLLADQGQSWKEEVVTMETWMNGSLKASCLYGQLPKFQDG 167
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKY 387
DLTLYQSNAILRHLGRS GLYGKDQ+EAAL+D+VNDGVEDLRCKYA LIYTNYEAGKE+Y
Sbjct: 168 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYTNYEAGKEEY 227
Query: 388 VKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSA 567
VK LP +LKPFE LLSQN+GGQAF+VG+QISFADYNLLDLL IHQVL PSCLD+FPLLSA
Sbjct: 228 VKALPGYLKPFEMLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLSA 287
Query: 568 YVARLSARPKIKAFLASPEHVNRPINGNGKQ 660
YVARLSARPK+KAFL SPEHVNRPINGN KQ
Sbjct: 288 YVARLSARPKLKAFLLSPEHVNRPINGNRKQ 318
>ref|XP_537776.1| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 210
Score = 356 bits (913), Expect = 1e-98
Identities = 177/210 (84%), Positives = 190/210 (90%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTI YFPV+GRCEAM MLLADQ QSWKEEVVTMETW LK SCL+ QLPKFQDGD
Sbjct: 1 MPPYTIIYFPVQGRCEAMHMLLADQGQSWKEEVVTMETWMKGSLKASCLYGQLPKFQDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTL QSNAILR LGRS GLYGKDQ+EAAL+D+VNDGVEDLRCKYA LIYTNYEAGKE+YV
Sbjct: 61 LTLNQSNAILRQLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYTNYEAGKEEYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP +LKPFETLLSQN+GGQAF+V +QISFADYNLLDLL IHQVL PSCLD+FPLLSAY
Sbjct: 121 KALPGYLKPFETLLSQNEGGQAFIVENQISFADYNLLDLLLIHQVLAPSCLDSFPLLSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
VARLS R K+KAFL+SPEHVNRPINGNGKQ
Sbjct: 181 VARLSTRRKLKAFLSSPEHVNRPINGNGKQ 210
>ref|XP_533214.1| PREDICTED: similar to glutathione S-transferase, pi 1 [Canis
familiaris].
Length = 210
Score = 332 bits (852), Expect = 2e-91
Identities = 164/209 (78%), Positives = 182/209 (87%), Gaps = 2/209 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETW--PPLKPSCLFRQLPKFQDGD 210
MPPYTI YFPVRGRCEAMRMLLADQ QSWKEEVVT ++W PLK SCL+ QLPKFQDGD
Sbjct: 1 MPPYTIVYFPVRGRCEAMRMLLADQGQSWKEEVVTKDSWMQSPLKASCLYGQLPKFQDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGR+FGLYGKDQ+EAALVDMVNDGVED+R + LI+ +YE GK +YV
Sbjct: 61 LTLYQSNAILRHLGRTFGLYGKDQREAALVDMVNDGVEDVRRHCSQLIHHSYEGGKARYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
+ELP +LKPFETLL QNQGGQAF+VG QISFADYNLLDLL HQVL P CLD+ PLL AY
Sbjct: 121 QELPGYLKPFETLLIQNQGGQAFIVGDQISFADYNLLDLLLNHQVLAPGCLDSHPLLLAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGK 657
V RLSARPK+KA+LASPEHVNRP++G K
Sbjct: 181 VTRLSARPKLKAYLASPEHVNRPVHGAQK 209
>ref|XP_853726.1| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 210
Score = 311 bits (798), Expect = 3e-85
Identities = 158/210 (75%), Positives = 176/210 (83%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTI YFPV G +AM MLL DQDQSWKEEVVTMETW LK S L+ QLPKFQD D
Sbjct: 1 MPPYTIIYFPVLGCYKAMHMLLVDQDQSWKEEVVTMETWMKGSLKASYLYGQLPKFQDRD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
+TLYQS+AIL+HLG S GLYGKD +EAAL+D+VNDGV+DLR K A LIYTNYEAGKE+YV
Sbjct: 61 VTLYQSSAILQHLGHSLGLYGKDHQEAALLDVVNDGVKDLRGKCALLIYTNYEAGKEEYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP +LKPFETLLSQN+GGQAF++G+QI FADYNLLDLL I QVL CLD+F LLS Y
Sbjct: 121 KALPGYLKPFETLLSQNEGGQAFIMGNQIFFADYNLLDLLLIQQVLATRCLDSFSLLSVY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
VA LS RP +K FLASPEH+NRPINGNGKQ
Sbjct: 181 VACLSTRPMLKVFLASPEHMNRPINGNGKQ 210
>ref|XP_855066.1| PREDICTED: similar to glutathione S-transferase, pi 1 [Canis
familiaris].
Length = 182
Score = 249 bits (637), Expect = 1e-66
Identities = 134/208 (64%), Positives = 145/208 (69%), Gaps = 2/208 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTI YFPVRG CEAM MLLADQ QSWKEE VTMETW LK SCL+ QLPKFQDGD
Sbjct: 1 MPPYTIIYFPVRGHCEAMHMLLADQGQSWKEEEVTMETWMKGSLKASCLYGQLPKFQDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILR +E+YV
Sbjct: 61 LTLYQSNAILR--------------------------------------------QERYV 76
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
+ LP +LKPFE LLSQN+GGQAF+VG+QISF DYNLLDLL IHQVL PSCLD+FPLLSAY
Sbjct: 77 RALPAYLKPFEMLLSQNEGGQAFIVGNQISFVDYNLLDLLWIHQVLAPSCLDSFPLLSAY 136
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNG 654
VA LSAR K++AFLASPEHVNRPINGNG
Sbjct: 137 VAHLSARLKLEAFLASPEHVNRPINGNG 164
>ref|XP_854548.1| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 160
Score = 207 bits (526), Expect = 1e-53
Identities = 119/207 (57%), Positives = 132/207 (63%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPLKPSCLFRQLPKFQDGDLT 216
MPPYTI YFPV+G CEAMRMLLADQ Q+ P+
Sbjct: 1 MPPYTIIYFPVQGCCEAMRMLLADQGQT-----------------------PQVPGRRPH 37
Query: 217 LYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYVKE 396
LYQSNAILRHLG S GLYGKDQ+EAAL+D+VNDGVEDL LIYTNYEAGKE+YVK
Sbjct: 38 LYQSNAILRHLGLSLGLYGKDQQEAALLDVVNDGVEDL------LIYTNYEAGKEEYVKA 91
Query: 397 LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
LP +LKPFE LL QN+GGQ F+VG P LD F LLSAYVA
Sbjct: 92 LPGYLKPFEMLLFQNEGGQVFIVGP-------------------GPQLLDPFLLLSAYVA 132
Query: 577 RLSARPKIKAFLASPEHVNRPINGNGK 657
RLS R K+KAFL SPE +NRP+NGNGK
Sbjct: 133 RLSTRLKLKAFLVSPELMNRPVNGNGK 159
>ref|XP_544987.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 142
Score = 154 bits (389), Expect = 8e-38
Identities = 102/193 (52%), Positives = 113/193 (58%), Gaps = 2/193 (1%)
Frame = +1
Query: 88 MRMLLADQDQSWKEEVVTMETW--PPLKPSCLFRQLPKFQDGDLTLYQSNAILRHLGRSF 261
MRMLLADQ QSWK+EVVTMET LK SCL+ QLPKFQDGDLTLYQSNAIL HLG S
Sbjct: 1 MRMLLADQGQSWKKEVVTMETGMKDSLKVSCLYGQLPKFQDGDLTLYQSNAILGHLGHSL 60
Query: 262 GLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYVKELPEHLKPFETLLSQN 441
GLY KDQ+EAAL+D+VND N
Sbjct: 61 GLYRKDQQEAALLDVVND----------------------------------------VN 80
Query: 442 QGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVARLSARPKIKAFLASP 621
+GGQAF+V +QISF D+ L IHQVL P+ L S YVA LS RPK+KAF SP
Sbjct: 81 EGGQAFIVSNQISFVDF-----LLIHQVLAPAAWTP-SLCSQYVACLSTRPKLKAF-QSP 133
Query: 622 EHVNRPINGNGKQ 660
INGNGKQ
Sbjct: 134 ----WSINGNGKQ 142
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 24,432,284
Number of extensions: 686067
Number of successful extensions: 5382
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 5135
Number of HSP's successfully gapped: 30
Length of query: 249
Length of database: 18,874,504
Length adjustment: 100
Effective length of query: 149
Effective length of database: 15,540,904
Effective search space: 2315594696
Effective search space used: 2315594696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007814
(748 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-lik... 337 3e-93
Alignment gi|NP_001072152.1| glutathione S-transferase mu 2 [Sus scrofa]. 112 2e-25
Alignment gi|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-li... 108 3e-24
Alignment gi|XP_001924094.2| PREDICTED: glutathione S-transferase Mu 1-li... 105 3e-23
Alignment gi|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa]. 102 2e-22
Alignment gi|NP_999015.1| glutathione S-transferase A2 [Sus scrofa]. 100 1e-21
Alignment gi|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like... 97 7e-21
Alignment gi|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like... 96 3e-20
Alignment gi|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like... 96 3e-20
Alignment gi|NP_001230308.1| glutathione S-transferase A4 [Sus scrofa]. 79 3e-15
>ref|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-like [Sus scrofa].
Length = 239
Score = 337 bits (865), Expect = 3e-93
Identities = 171/210 (81%), Positives = 183/210 (87%), Gaps = 2/210 (0%)
Frame = +1
Query: 34 TMPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETW--PPLKPSCLFRQLPKFQDG 207
T+P YTI YFP RGRCEAMRMLLADQ QSWKEEVVT ETW PLK +CL+ QLPKFQDG
Sbjct: 29 TVPSYTIVYFPARGRCEAMRMLLADQGQSWKEEVVTKETWLQGPLKATCLYGQLPKFQDG 88
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKY 387
DLTLYQSNAILRHLGRS GLYGKD +EAAL+DMVNDGVEDLR + LI NYE K +Y
Sbjct: 89 DLTLYQSNAILRHLGRSLGLYGKDLREAALLDMVNDGVEDLRRLCSHLIRHNYEEDKARY 148
Query: 388 VKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSA 567
V+ELP HL+PFETLLSQNQGGQAF+VGSQISFADYNLLDLL HQVL PSCLDAFPLLSA
Sbjct: 149 VEELPGHLRPFETLLSQNQGGQAFIVGSQISFADYNLLDLLLSHQVLVPSCLDAFPLLSA 208
Query: 568 YVARLSARPKIKAFLASPEHVNRPINGNGK 657
YVARLSARPK+KAFLASPEHVNRPI G+ K
Sbjct: 209 YVARLSARPKLKAFLASPEHVNRPIFGSRK 238
>ref|NP_001072152.1| glutathione S-transferase mu 2 [Sus scrofa].
Length = 218
Score = 112 bits (280), Expect = 2e-25
Identities = 64/206 (31%), Positives = 111/206 (53%), Gaps = 11/206 (5%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLPKFQDG 207
Y+ +RG A+R+LL D S++E+ TM P K F LP DG
Sbjct: 7 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 66
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYEAGKEK 384
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 67 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 126
Query: 385 YVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLS 564
Y+KE+PE +KPF L G + + G ++++ D+ D+L ++++ +P CLD FP L
Sbjct: 127 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 182
Query: 565 AYVARLSARPKIKAFLASPEHVNRPI 642
A+++R +I A++ S + P+
Sbjct: 183 AFLSRFEGLERISAYMRSSRFLPHPV 208
>ref|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-like [Sus scrofa].
Length = 225
Score = 108 bits (270), Expect = 3e-24
Identities = 69/214 (32%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPL----------KPSCLFRQLPKFQDG 207
Y+ +RG A+RMLL D S++E+ P K F LP DG
Sbjct: 11 YWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKYKLDLDFPNLPYLMDG 70
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYEAGKEK 384
L QSNAILR++ R + G+ ++E VD++ + + D R + L Y+ ++E K +
Sbjct: 71 KNKLTQSNAILRYIARKHNMCGETEEEKIRVDIMENQIMDFRMQLIRLCYSPDHEKLKPQ 130
Query: 385 YVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLS 564
Y+++LP LK F L G ++ G +++F D+ D+L +++ P CLD FP L
Sbjct: 131 YLEQLPGQLKQFSLFL----GKYSWFAGEKLTFVDFLTYDVLDQNRIFEPRCLDEFPNLK 186
Query: 565 AYVARLSARPKIKAFLASPEHVNRPINGNGKQ*G 666
A++ R A KI A++ S + PIN Q G
Sbjct: 187 AFMCRFEALEKIAAYMQSDRFLKMPINNKMAQWG 220
>ref|XP_001924094.2| PREDICTED: glutathione S-transferase Mu 1-like [Sus scrofa].
Length = 389
Score = 105 bits (261), Expect = 3e-23
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Frame = +1
Query: 49 TITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPL----------KPSCLFRQLPKF 198
T+ Y+ +RG A+R+LL +++E M P K F LP
Sbjct: 175 TLGYWDIRGLAHAIRLLLEYTGSNYEERKYMMGDPPDYDRSQWLNERSKLGLDFPNLPYL 234
Query: 199 QDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTN-YEAG 375
DG L QSNAILR++ R + G+ +KE VD++ V D+R A + Y++ +E
Sbjct: 235 IDGPHKLTQSNAILRYIARKHNMCGETEKEKIQVDILESQVMDVRLHMARVCYSSDFEKL 294
Query: 376 KEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFP 555
K YV E+PE ++ F L G + G +++ D+ D+L +H++ P CLD FP
Sbjct: 295 KPGYVDEIPEKMRLFSAFL----GKGPWFAGHTLTYVDFLAYDILDLHRIFEPKCLDEFP 350
Query: 556 LLSAYVARLSARPKIKAFLASPEHVNRPI 642
L ++ R KI A++ S + RP+
Sbjct: 351 NLKDFITRFEGLKKISAYMKSSRFLPRPL 379
>ref|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa].
Length = 222
Score = 102 bits (254), Expect = 2e-22
Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVV-TMETWPPLKP--SCLFRQLPKFQDGDLTLYQS 228
YF RGR E +R LLA ++E+ + T E L S LF+Q+P + + L Q+
Sbjct: 9 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 68
Query: 229 NAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDL--RCKYATLIYTNYEAGKEKYVKE-- 396
AIL ++ + LYGKD KE AL+DM +GV DL L N + K +KE
Sbjct: 69 RAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAKVASIKEKS 128
Query: 397 LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
+L FE +L + GQ ++VG+++S AD L++LL + L+PS L FPLL A
Sbjct: 129 TNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPLLKALKT 186
Query: 577 RLSARPKIKAFL 612
R+S P +K FL
Sbjct: 187 RVSNLPTVKKFL 198
>ref|NP_999015.1| glutathione S-transferase A2 [Sus scrofa].
Length = 223
Score = 99.8 bits (247), Expect = 1e-21
Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPLKP-----SCLFRQLPKFQDGDLTLY 222
YF RGR E +R LLA ++E+ + E L S LF+Q+P + + L
Sbjct: 9 YFNGRGRMECIRWLLAAAGVEFEEKFI--ENPNDLNKLTNDGSLLFQQVPMVEIDGMKLV 66
Query: 223 QSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDL--RCKYATLIYTNYEAGKEKYVKE 396
Q+ AIL ++ + LYGKD KE AL+DM +GV DL L N + K +KE
Sbjct: 67 QTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAKVASIKE 126
Query: 397 --LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
+L FE +L + GQ ++VG+++S AD L++LL + L+PS L FPLL A
Sbjct: 127 KSTNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPLLKAL 184
Query: 571 VARLSARPKIKAFL 612
R+S P +K FL
Sbjct: 185 KTRVSNLPTVKKFL 198
>ref|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like [Sus scrofa].
Length = 223
Score = 97.4 bits (241), Expect = 7e-21
Identities = 69/192 (35%), Positives = 105/192 (54%), Gaps = 7/192 (3%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVV-TMETWPPLKP--SCLFRQLPKFQDGDLTLYQS 228
YF RGR E +R LLA ++E+ V T+E L+ S +F+Q+P + + L Q+
Sbjct: 9 YFDGRGRAEVIRWLLASAGVEFEEKFVDTLEDLEKLRNDGSLMFQQVPMIEIDGMKLVQT 68
Query: 229 NAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDL--RCKYATLIYTNYEAGKEKYVKE-L 399
AIL ++ + L GKD KE A VDM +G+ D+ + + + K +KE +
Sbjct: 69 RAILNYIATKYDLCGKDIKERAAVDMYTEGIADIGEMIMLLPICPPDEKDAKMALIKERV 128
Query: 400 PEHLKP-FETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
H P FE +L + GQ ++VG+++S AD L++LL + L+PS L FPLL A
Sbjct: 129 SNHYLPAFEKVLKSH--GQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPLLKALKT 186
Query: 577 RLSARPKIKAFL 612
R+S P +K FL
Sbjct: 187 RVSNLPTVKKFL 198
>ref|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 95.5 bits (236), Expect = 3e-20
Identities = 68/192 (35%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVV-TMETWPPLKPS--CLFRQLPKFQDGDLTLYQS 228
YF RGR E++R LLA ++EE T E + LK LF Q+P + + L Q+
Sbjct: 9 YFRGRGRMESIRWLLAAAGVEFEEEFFETREQYEKLKKDGLLLFGQVPLVEIDGMALTQT 68
Query: 229 NAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV----KE 396
AIL +L + L+GKD KE +DM DG DL A + +E K
Sbjct: 69 RAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEENLALVVEKA 128
Query: 397 LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
+ FE +L G+ F+VG++ S+AD LL+ + + + L+ S L FPLL A+
Sbjct: 129 KTRYFPVFEKILKDQ--GEDFLVGNKFSWADIQLLEAILMMEELDASVLSDFPLLQAFKT 186
Query: 577 RLSARPKIKAFL 612
R+S P IK FL
Sbjct: 187 RISNIPTIKKFL 198
>ref|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 95.5 bits (236), Expect = 3e-20
Identities = 68/192 (35%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVV-TMETWPPLKPS--CLFRQLPKFQDGDLTLYQS 228
YF RGR E++R LLA ++EE T E + LK LF Q+P + + L Q+
Sbjct: 9 YFRGRGRMESIRWLLAAAGVEFEEEFFETREQYEKLKKDGLLLFGQVPLVEIDGMALTQT 68
Query: 229 NAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV----KE 396
AIL +L + L+GKD KE +DM DG DL A + +E K
Sbjct: 69 RAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEENLALVVEKA 128
Query: 397 LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
+ FE +L G+ F+VG++ S+AD LL+ + + + L+ S L FPLL A+
Sbjct: 129 KTRYFPVFEKILKDQ--GEDFLVGNKFSWADIQLLEAILMMEELDASVLSDFPLLQAFKT 186
Query: 577 RLSARPKIKAFL 612
R+S P IK FL
Sbjct: 187 RISNIPTIKKFL 198
>ref|NP_001230308.1| glutathione S-transferase A4 [Sus scrofa].
Length = 223
Score = 78.6 bits (192), Expect = 3e-15
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Frame = +1
Query: 70 RGRCEAMRMLLADQDQSWKEEVV-TMETWPPLKPS--CLFRQLPKFQDGDLTLYQSNAIL 240
RGR E++R +LA + EE + T E L+ LF+Q+P + + L Q+ +IL
Sbjct: 14 RGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQTRSIL 73
Query: 241 RHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV----KELPEH 408
++ L+GKD KE L+DM +G DL + + +++ V K + +
Sbjct: 74 HYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKEVVNMAQKAIIRY 133
Query: 409 LKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVARLSA 588
FE +L + GQ F+VG+Q+S AD LL + + P+ L AFP L + ++S
Sbjct: 134 FPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHLQEFTVKISN 191
Query: 589 RPKIKAFL 612
P IK FL
Sbjct: 192 IPTIKKFL 199
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 15,120,135
Number of extensions: 433739
Number of successful extensions: 3527
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 3265
Number of HSP's successfully gapped: 12
Length of query: 249
Length of database: 11,343,932
Length adjustment: 96
Effective length of query: 153
Effective length of database: 8,953,820
Effective search space: 1369934460
Effective search space used: 1369934460
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007814
(748 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_038569.1| glutathione S-transferase P 1 [Mus musculus]. 361 e-100
Alignment gi|XP_001478705.1| PREDICTED: glutathione S-transferase P 2-lik... 355 2e-98
Alignment gi|XP_003086243.1| PREDICTED: glutathione S-transferase P 2-lik... 355 2e-98
Alignment gi|NP_861461.1| glutathione S-transferase P 2 [Mus musculus]. 354 4e-98
Alignment gi|NP_659118.1| hypothetical protein LOC225884 [Mus musculus]. 291 4e-79
Alignment gi|NP_032209.1| glutathione S-transferase Mu 2 [Mus musculus]. 114 1e-25
Alignment gi|NP_032210.3| glutathione S-transferase Mu 6 [Mus musculus]. 112 2e-25
Alignment gi|NP_081040.1| glutathione S-transferase mu 4 isoform 1 [Mus m... 110 1e-24
Alignment gi|NP_034490.1| glutathione S-transferase Mu 5 [Mus musculus]. 108 3e-24
Alignment gi|NP_034488.1| glutathione S-transferase Mu 1 [Mus musculus]. 107 1e-23
>ref|NP_038569.1| glutathione S-transferase P 1 [Mus musculus].
Length = 210
Score = 361 bits (926), Expect = e-100
Identities = 178/210 (84%), Positives = 189/210 (90%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTI YFPVRGRCEAMRMLLADQ QSWKEEVVT++TW LKP+CL+ QLPKF+DGD
Sbjct: 1 MPPYTIVYFPVRGRCEAMRMLLADQGQSWKEEVVTIDTWMQGLLKPTCLYGQLPKFEDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGRS GLYGK+Q+EAA +DMVNDGVEDLR KY TLIYTNYE GK YV
Sbjct: 61 LTLYQSNAILRHLGRSLGLYGKNQREAAQMDMVNDGVEDLRGKYVTLIYTNYENGKNDYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP HLKPFETLLSQNQGG+AF+VG QISFADYNLLDLL IHQVL P CLD FPLLSAY
Sbjct: 121 KALPGHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
VARLSARPKIKAFL+SPEHVNRPINGNGKQ
Sbjct: 181 VARLSARPKIKAFLSSPEHVNRPINGNGKQ 210
>ref|XP_001478705.1| PREDICTED: glutathione S-transferase P 2-like [Mus musculus].
Length = 210
Score = 355 bits (911), Expect = 2e-98
Identities = 175/210 (83%), Positives = 186/210 (88%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTI YFP RGRCEAMRMLL DQ QSWKEEVVT++TW LKP+CL+ QLPKF+DGD
Sbjct: 1 MPPYTIVYFPSRGRCEAMRMLLTDQGQSWKEEVVTIDTWMQGLLKPTCLYGQLPKFEDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGRS GLYGK+Q+EAA VDMVNDGVEDLR KY T+IY NYE GK YV
Sbjct: 61 LTLYQSNAILRHLGRSLGLYGKNQREAAQVDMVNDGVEDLRGKYGTMIYRNYENGKNDYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP HLKPFETLLSQNQGG+AF+VG QISFADYNLLDLL IHQVL P CLD FPLLSAY
Sbjct: 121 KALPGHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
VARLSARPKIKAFL+SPEHVNRPINGNGKQ
Sbjct: 181 VARLSARPKIKAFLSSPEHVNRPINGNGKQ 210
>ref|XP_003086243.1| PREDICTED: glutathione S-transferase P 2-like [Mus musculus].
Length = 210
Score = 355 bits (911), Expect = 2e-98
Identities = 175/210 (83%), Positives = 186/210 (88%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTI YFP RGRCEAMRMLL DQ QSWKEEVVT++TW LKP+CL+ QLPKF+DGD
Sbjct: 1 MPPYTIVYFPSRGRCEAMRMLLTDQGQSWKEEVVTIDTWMQGLLKPTCLYGQLPKFEDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGRS GLYGK+Q+EAA VDMVNDGVEDLR KY T+IY NYE GK YV
Sbjct: 61 LTLYQSNAILRHLGRSLGLYGKNQREAAQVDMVNDGVEDLRGKYGTMIYRNYENGKNDYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP HLKPFETLLSQNQGG+AF+VG QISFADYNLLDLL IHQVL P CLD FPLLSAY
Sbjct: 121 KALPGHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
VARLSARPKIKAFL+SPEHVNRPINGNGKQ
Sbjct: 181 VARLSARPKIKAFLSSPEHVNRPINGNGKQ 210
>ref|NP_861461.1| glutathione S-transferase P 2 [Mus musculus].
Length = 210
Score = 354 bits (908), Expect = 4e-98
Identities = 175/210 (83%), Positives = 186/210 (88%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTI YFP GRCEAMRMLLADQ QSWKEEVVT++TW LKP+CL+ QLPKF+DGD
Sbjct: 1 MPPYTIVYFPSPGRCEAMRMLLADQGQSWKEEVVTIDTWMQGLLKPTCLYGQLPKFEDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSNAILRHLGRS GLYGK+Q+EAA VDMVNDGVEDLR KY T+IY NYE GK YV
Sbjct: 61 LTLYQSNAILRHLGRSLGLYGKNQREAAQVDMVNDGVEDLRGKYGTMIYRNYENGKNDYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP HLKPFETLLSQNQGG+AF+VG QISFADYNLLDLL IHQVL P CLD FPLLSAY
Sbjct: 121 KALPGHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
VARLSARPKIKAFL+SPEHVNRPINGNGKQ
Sbjct: 181 VARLSARPKIKAFLSSPEHVNRPINGNGKQ 210
>ref|NP_659118.1| hypothetical protein LOC225884 [Mus musculus].
Length = 210
Score = 291 bits (745), Expect = 4e-79
Identities = 145/204 (71%), Positives = 166/204 (81%), Gaps = 2/204 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYTI YFP RGRCE MRMLLADQ QSWKEEVVT++ W K SCLF Q+PKFQDG+
Sbjct: 1 MPPYTIVYFPSRGRCEVMRMLLADQGQSWKEEVVTLDVWEQGTFKASCLFGQIPKFQDGE 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSN ILRHLGRSFGLYGKDQ+EAALVDMVNDG+EDL + A + GK++Y
Sbjct: 61 LTLYQSNTILRHLGRSFGLYGKDQQEAALVDMVNDGLEDLFRRIARQYRHILKEGKDQYQ 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
KELP HLKPFETLL+QN+GGQ+F+VG QISFADY LLD+L ++L P L+ FPL SAY
Sbjct: 121 KELPGHLKPFETLLAQNRGGQSFIVGDQISFADYRLLDVLLNLELLFPGYLNDFPLFSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPI 642
VARL +RPK+KAFL SPEHVNRP+
Sbjct: 181 VARLKSRPKLKAFLESPEHVNRPL 204
>ref|NP_032209.1| glutathione S-transferase Mu 2 [Mus musculus].
Length = 218
Score = 114 bits (284), Expect = 1e-25
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 11/211 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLP 192
P T+ Y+ +RG A+R+LL D S++++ TM P K F LP
Sbjct: 2 PMTLGYWDIRGLAHAIRLLLEYTDTSYEDKKYTMGDAPDYDRSQWLSEKFKLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG + QSNAILR+L R L G+ ++E VD++ + D R + A + Y+ ++E
Sbjct: 62 YLIDGSHKITQSNAILRYLARKHNLCGETEEERIRVDILENQAMDTRIQLAMVCYSPDFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K +Y++ LPE +K L S+ G Q + G+++++ D+ + D+L H++ P CLDA
Sbjct: 122 KKKPEYLEGLPEKMK----LYSEFLGKQPWFAGNKVTYVDFLVYDVLDQHRIFEPKCLDA 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPEHVNRPI 642
FP L ++ R KI ++ S +++PI
Sbjct: 178 FPNLKDFMGRFEGLKKISDYMKSSRFLSKPI 208
>ref|NP_032210.3| glutathione S-transferase Mu 6 [Mus musculus].
Length = 218
Score = 112 bits (281), Expect = 2e-25
Identities = 71/211 (33%), Positives = 112/211 (53%), Gaps = 11/211 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLP 192
P T+ Y+ +RG A+R+LL + ++E+ M P K F LP
Sbjct: 2 PVTLGYWDIRGLGHAIRLLLEYTETGYEEKRYAMGDAPDYDRSQWLNDKFKLDLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG + QSNAILR+LGR L G+ ++E VD++ V D R + L Y+ ++E
Sbjct: 62 YLIDGSHKVTQSNAILRYLGRKHNLCGETEEERIRVDILEKQVMDTRIQMGMLCYSADFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K +++K LP+ LK L S+ G Q + G +I+FAD+ + D+L H++ P+CLDA
Sbjct: 122 KRKPEFLKGLPDQLK----LYSEFLGKQPWFAGDKITFADFLVYDVLDQHRMFEPTCLDA 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPEHVNRPI 642
FP L ++AR KI A++ + + P+
Sbjct: 178 FPNLKDFMARFEGLRKISAYMKTSRFLPSPV 208
>ref|NP_081040.1| glutathione S-transferase mu 4 isoform 1 [Mus musculus].
Length = 218
Score = 110 bits (275), Expect = 1e-24
Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 11/211 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLP 192
P T+ Y+ +RG A+R+LL S++E+ TM P K F LP
Sbjct: 2 PMTLGYWDIRGLAHAIRLLLEYTGSSYEEKRYTMGDAPDYDRSQWLSEKFKLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG + QSNAILR++ R L G+ ++E VD++ + D+ + A + Y+ ++E
Sbjct: 62 YLIDGSHKITQSNAILRYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K +Y+++LP +K L SQ G + + VG +I+F D+ D+L +H + P+CLDA
Sbjct: 122 KLKVEYLEQLPGMVK----LFSQFLGQRTWFVGEKITFVDFLAYDILDLHLIFEPTCLDA 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPEHVNRPI 642
FP L +VAR +I A++ + + P+
Sbjct: 178 FPNLKDFVARFEVLKRISAYMKTSRFLRTPL 208
>ref|NP_034490.1| glutathione S-transferase Mu 5 [Mus musculus].
Length = 224
Score = 108 bits (271), Expect = 3e-24
Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 11/207 (5%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLPKFQDG 207
Y+ +RG A+RMLL D S++E+ P K F LP DG
Sbjct: 10 YWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKFKLDLDFPNLPYLMDG 69
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIY-TNYEAGKEK 384
+ QSNAILR++ R + G ++E VD++ + + D R + L Y +N+E K +
Sbjct: 70 KNKITQSNAILRYIARKHNMCGDTEEEKIRVDIMENQIMDFRMQLVRLCYNSNHENLKPQ 129
Query: 385 YVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLS 564
Y+++LP LK F L G + G +++F D+ D+L +++ P CLD FP L
Sbjct: 130 YLEQLPAQLKQFSLFL----GKFTWFAGEKLTFVDFLTYDVLDQNRIFEPKCLDEFPNLK 185
Query: 565 AYVARLSARPKIKAFLASPEHVNRPIN 645
A++ R A KI AFL S PIN
Sbjct: 186 AFMCRFEALEKIAAFLQSDRFFKMPIN 212
>ref|NP_034488.1| glutathione S-transferase Mu 1 [Mus musculus].
Length = 218
Score = 107 bits (266), Expect = 1e-23
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 11/211 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPPL----------KPSCLFRQLP 192
P + Y+ VRG +RMLL D S+ E+ TM P K F LP
Sbjct: 2 PMILGYWNVRGLTHPIRMLLEYTDSSYDEKRYTMGDAPDFDRSQWLNEKFKLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG + QSNAILR+L R L G+ ++E D+V + V D R + L Y ++E
Sbjct: 62 YLIDGSHKITQSNAILRYLARKHHLDGETEEERIRADIVENQVMDTRMQLIMLCYNPDFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K +++K +PE +K L S+ G + + G ++++ D+ D+L +++ P CLDA
Sbjct: 122 KQKPEFLKTIPEKMK----LYSEFLGKRPWFAGDKVTYVDFLAYDILDQYRMFEPKCLDA 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPEHVNRPI 642
FP L ++AR KI A++ S ++ PI
Sbjct: 178 FPNLRDFLARFEGLKKISAYMKSSRYIATPI 208
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 20,006,592
Number of extensions: 541219
Number of successful extensions: 3685
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 3499
Number of HSP's successfully gapped: 23
Length of query: 249
Length of database: 15,617,559
Length adjustment: 99
Effective length of query: 150
Effective length of database: 12,643,995
Effective search space: 1896599250
Effective search space used: 1896599250
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007814
(748 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000843.1| glutathione S-transferase P [Homo sapiens]. 356 1e-98
Alignment gi|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo ... 118 5e-27
Alignment gi|NP_000552.2| glutathione S-transferase Mu 1 isoform 1 [Homo ... 113 2e-25
Alignment gi|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens]. 112 5e-25
Alignment gi|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo ... 109 2e-24
Alignment gi|NP_001135840.1| glutathione S-transferase Mu 2 isoform 2 [Ho... 107 1e-23
Alignment gi|NP_000842.2| glutathione S-transferase Mu 5 [Homo sapiens]. 105 4e-23
Alignment gi|NP_671489.1| glutathione S-transferase Mu 4 isoform 2 [Homo ... 100 2e-21
Alignment gi|NP_000837.3| glutathione S-transferase A2 [Homo sapiens]. 96 4e-20
Alignment gi|NP_000838.3| glutathione S-transferase A3 [Homo sapiens]. 95 7e-20
>ref|NP_000843.1| glutathione S-transferase P [Homo sapiens].
Length = 210
Score = 356 bits (914), Expect = 1e-98
Identities = 174/210 (82%), Positives = 187/210 (89%), Gaps = 2/210 (0%)
Frame = +1
Query: 37 MPPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP--LKPSCLFRQLPKFQDGD 210
MPPYT+ YFPVRGRC A+RMLLADQ QSWKEEVVT+ETW LK SCL+ QLPKFQDGD
Sbjct: 1 MPPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGD 60
Query: 211 LTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV 390
LTLYQSN ILRHLGR+ GLYGKDQ+EAALVDMVNDGVEDLRCKY +LIYTNYEAGK+ YV
Sbjct: 61 LTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYV 120
Query: 391 KELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAY 570
K LP LKPFETLLSQNQGG+ F+VG QISFADYNLLDLL IH+VL P CLDAFPLLSAY
Sbjct: 121 KALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAY 180
Query: 571 VARLSARPKIKAFLASPEHVNRPINGNGKQ 660
V RLSARPK+KAFLASPE+VN PINGNGKQ
Sbjct: 181 VGRLSARPKLKAFLASPEYVNLPINGNGKQ 210
>ref|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo sapiens].
Length = 218
Score = 118 bits (296), Expect = 5e-27
Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 11/211 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLP 192
P T+ Y+ +RG ++R+LL D S++E+ TM P K F LP
Sbjct: 2 PMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG + QSNAILR++ R L G+ +KE D++ + D R + A L Y ++E
Sbjct: 62 YLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K +Y++ LPE LK L SQ G Q + +G +I+F D+ D+L +QV PSCLDA
Sbjct: 122 KLKPEYLQALPEMLK----LYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDA 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPEHVNRPI 642
FP L +++R KI A++ S + RP+
Sbjct: 178 FPNLKDFISRFEGLEKISAYMKSSRFLPRPV 208
>ref|NP_000552.2| glutathione S-transferase Mu 1 isoform 1 [Homo sapiens].
Length = 218
Score = 113 bits (282), Expect = 2e-25
Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLP 192
P + Y+ +RG A+R+LL D S++E+ TM P K F LP
Sbjct: 2 PMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG + QSNAIL ++ R L G+ ++E VD++ + D + + Y +E
Sbjct: 62 YLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQTMDNHMQLGMICYNPEFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K KY++ELPE LK L S+ G + + G++I+F D+ + D+L +H++ P CLDA
Sbjct: 122 KLKPKYLEELPEKLK----LYSEFLGKRPWFAGNKITFVDFLVYDVLDLHRIFEPKCLDA 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPEHVNRPI 642
FP L +++R KI A++ S + RP+
Sbjct: 178 FPNLKDFISRFEGLEKISAYMKSSRFLPRPV 208
>ref|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens].
Length = 225
Score = 112 bits (279), Expect = 5e-25
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 11/214 (5%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLPKFQDG 207
Y+ +RG A+R+LL D S++E+ T P K F LP DG
Sbjct: 11 YWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLDFPNLPYLLDG 70
Query: 208 DLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTN-YEAGKEK 384
+ QSNAILR++ R + G+ ++E VD++ + V D R + L Y++ +E K +
Sbjct: 71 KNKITQSNAILRYIARKHNMCGETEEEKIRVDIIENQVMDFRTQLIRLCYSSDHEKLKPQ 130
Query: 385 YVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLS 564
Y++ELP LK F L G ++ G +++F D+ D+L +++ +P CLD FP L
Sbjct: 131 YLEELPGQLKQFSMFL----GKFSWFAGEKLTFVDFLTYDILDQNRIFDPKCLDEFPNLK 186
Query: 565 AYVARLSARPKIKAFLASPEHVNRPINGNGKQ*G 666
A++ R A KI A+L S + PIN Q G
Sbjct: 187 AFMCRFEALEKIAAYLQSDQFCKMPINNKMAQWG 220
>ref|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo sapiens].
Length = 218
Score = 109 bits (273), Expect = 2e-24
Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 11/209 (5%)
Frame = +1
Query: 49 TITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLPKF 198
T+ Y+ +RG A+R+LL D S++E+ TM P K F LP
Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYL 63
Query: 199 QDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYEAG 375
DG + QSNAIL ++ R L G+ ++E VD++ + D+ + A + Y+ ++E
Sbjct: 64 IDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDFEKL 123
Query: 376 KEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFP 555
K +Y++ELP ++ F SQ G + + VG +I+F D+ D+L +H++ P+CLDAFP
Sbjct: 124 KPEYLEELPTMMQHF----SQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFP 179
Query: 556 LLSAYVARLSARPKIKAFLASPEHVNRPI 642
L +++R KI A++ S + +P+
Sbjct: 180 NLKDFISRFEGLEKISAYMKSSRFLPKPL 208
>ref|NP_001135840.1| glutathione S-transferase Mu 2 isoform 2 [Homo sapiens].
Length = 191
Score = 107 bits (266), Expect = 1e-23
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLP 192
P T+ Y+ +RG ++R+LL D S++E+ TM P K F LP
Sbjct: 2 PMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG + QSNAILR++ R L G+ +KE D++ + D R + A L Y ++E
Sbjct: 62 YLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K +Y++ LPE LK L SQ G Q + +G +I+F D+ D+L +QV PSCLDA
Sbjct: 122 KLKPEYLQALPEMLK----LYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDA 177
Query: 550 FPLLSAYVAR 579
FP L +++R
Sbjct: 178 FPNLKDFISR 187
>ref|NP_000842.2| glutathione S-transferase Mu 5 [Homo sapiens].
Length = 218
Score = 105 bits (262), Expect = 4e-23
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Frame = +1
Query: 43 PYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLP 192
P T+ Y+ +RG A+R+LL D S+ E+ T+ P K F LP
Sbjct: 2 PMTLGYWDIRGLAHAIRLLLEYTDSSYVEKKYTLGDAPDYDRSQWLNEKFKLGLDFPNLP 61
Query: 193 KFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYE 369
DG + QSNAILR++ R L G+ ++E VD++ + V D + L Y ++E
Sbjct: 62 YLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENQVMDNHMELVRLCYDPDFE 121
Query: 370 AGKEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDA 549
K KY++ELPE LK L S+ G + + G +I+F D+ D+L + ++ P CLDA
Sbjct: 122 KLKPKYLEELPEKLK----LYSEFLGKRPWFAGDKITFVDFLAYDVLDMKRIFEPKCLDA 177
Query: 550 FPLLSAYVARLSARPKIKAFLASPE 624
F L +++R KI A++ S +
Sbjct: 178 FLNLKDFISRFEGLKKISAYMKSSQ 202
>ref|NP_671489.1| glutathione S-transferase Mu 4 isoform 2 [Homo sapiens].
Length = 195
Score = 99.8 bits (247), Expect = 2e-21
Identities = 62/188 (32%), Positives = 103/188 (54%), Gaps = 11/188 (5%)
Frame = +1
Query: 49 TITYFPVRGRCEAMRMLLADQDQSWKEEVVTMETWPP----------LKPSCLFRQLPKF 198
T+ Y+ +RG A+R+LL D S++E+ TM P K F LP
Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYL 63
Query: 199 QDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYT-NYEAG 375
DG + QSNAIL ++ R L G+ ++E VD++ + D+ + A + Y+ ++E
Sbjct: 64 IDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDFEKL 123
Query: 376 KEKYVKELPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFP 555
K +Y++ELP ++ F SQ G + + VG +I+F D+ D+L +H++ P+CLDAFP
Sbjct: 124 KPEYLEELPTMMQHF----SQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFP 179
Query: 556 LLSAYVAR 579
L +++R
Sbjct: 180 NLKDFISR 187
>ref|NP_000837.3| glutathione S-transferase A2 [Homo sapiens].
Length = 222
Score = 95.5 bits (236), Expect = 4e-20
Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVV-TMETWPPLKPS--CLFRQLPKFQDGDLTLYQS 228
Y +RGR E++R LLA ++E+ + + E L+ +F+Q+P + + L Q+
Sbjct: 9 YSNIRGRMESIRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEIDGMKLVQT 68
Query: 229 NAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV----KE 396
AIL ++ + LYGKD KE AL+DM +G+ DL L ++ E K K
Sbjct: 69 RAILNYIASKYNLYGKDIKEKALIDMYIEGIADLGEMILLLPFSQPEEQDAKLALIQEKT 128
Query: 397 LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
+ FE +L + GQ ++VG+++S AD +L++LL + L+ S + +FPLL A
Sbjct: 129 KNRYFPAFEKVLKSH--GQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKALKT 186
Query: 577 RLSARPKIKAFL 612
R+S P +K FL
Sbjct: 187 RISNLPTVKKFL 198
>ref|NP_000838.3| glutathione S-transferase A3 [Homo sapiens].
Length = 222
Score = 94.7 bits (234), Expect = 7e-20
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Frame = +1
Query: 58 YFPVRGRCEAMRMLLADQDQSWKEEVV-TMETWPPLKP--SCLFRQLPKFQDGDLTLYQS 228
YF RGR E +R LLA ++E+ + + E L+ S +F+Q+P + + L Q+
Sbjct: 9 YFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEIDGMKLVQT 68
Query: 229 NAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYV----KE 396
AIL ++ + LYGKD KE AL+DM +G+ DL L E K K
Sbjct: 69 RAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAKIALIKEKT 128
Query: 397 LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVA 576
+ FE +L + GQ ++VG+++S AD +L++LL + L+ S + FPLL A
Sbjct: 129 KSRYFPAFEKVLQSH--GQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPLLKALKT 186
Query: 577 RLSARPKIKAFL 612
R+S P +K FL
Sbjct: 187 RISNLPTVKKFL 198
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 23,816,601
Number of extensions: 663926
Number of successful extensions: 4821
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 4598
Number of HSP's successfully gapped: 15
Length of query: 249
Length of database: 18,297,164
Length adjustment: 100
Effective length of query: 149
Effective length of database: 15,000,764
Effective search space: 2235113836
Effective search space used: 2235113836
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007814
(748 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 521 e-145
>Sscrofa_Chr02
|| Length = 162569375
Score = 521 bits (263), Expect = e-145
Identities = 263/263 (100%)
Strand = Plus / Minus
Query: 472 cagatctcctttgccgactacaacctgctggacctgcttcggattcaccaggtcctgaac 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3618859 cagatctcctttgccgactacaacctgctggacctgcttcggattcaccaggtcctgaac 3618800
Query: 532 cccagctgcctggatgccttccctctgctctcggcctacgtggcccgcctcagcgcccgg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3618799 cccagctgcctggatgccttccctctgctctcggcctacgtggcccgcctcagcgcccgg 3618740
Query: 592 cccaagatcaaggccttcctggcctcccccgagcatgtgaaccgccccatcaacggcaac 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3618739 cccaagatcaaggccttcctggcctcccccgagcatgtgaaccgccccatcaacggcaac 3618680
Query: 652 gggaaacagtaagggctttgtggctggaggcgggagccgcctgcttccctttcttcagga 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3618679 gggaaacagtaagggctttgtggctggaggcgggagccgcctgcttccctttcttcagga 3618620
Query: 712 ccaataaaatttcccagaaaagc 734
|||||||||||||||||||||||
Sbjct: 3618619 ccaataaaatttcccagaaaagc 3618597
Score = 238 bits (120), Expect = 4e-60
Identities = 159/172 (92%)
Strand = Plus / Plus
Query: 471 ccagatctcctttgccgactacaacctgctggacctgcttcggattcaccaggtcctgaa 530
||||||||||||||| |||||||||||||||||||| || | || ||||||||||||
Sbjct: 3637390 ccagatctcctttgctgactacaacctgctggaccttctgctgagccaccaggtcctggt 3637449
Query: 531 ccccagctgcctggatgccttccctctgctctcggcctacgtggcccgcctcagcgcccg 590
||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 3637450 ccccagctgcctggacgccttccccctgctctcggcctatgtggcccgcctcagcgcccg 3637509
Query: 591 gcccaagatcaaggccttcctggcctcccccgagcatgtgaaccgccccatc 642
||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3637510 gcccaagctcaaggccttcctggcctcccccgagcacgtgaaccgccccatc 3637561
Score = 238 bits (120), Expect = 4e-60
Identities = 159/172 (92%)
Strand = Plus / Minus
Query: 471 ccagatctcctttgccgactacaacctgctggacctgcttcggattcaccaggtcctgaa 530
||||||||||||||| |||||||||||||||||||| || | || ||||||||||||
Sbjct: 3724886 ccagatctcctttgctgactacaacctgctggaccttctgctgagccaccaggtcctggt 3724827
Query: 531 ccccagctgcctggatgccttccctctgctctcggcctacgtggcccgcctcagcgcccg 590
||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 3724826 ccccagctgcctggacgccttccccctgctctcggcctatgtggcccgcctcagcgcccg 3724767
Query: 591 gcccaagatcaaggccttcctggcctcccccgagcatgtgaaccgccccatc 642
||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3724766 gcccaagctcaaggccttcctggcctcccccgagcacgtgaaccgccccatc 3724715
Score = 214 bits (108), Expect = 5e-53
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 367 gaggcagggaaggagaagtacgtgaaggagctgcccgagcacctgaagccctttgagacc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3619129 gaggcagggaaggagaagtacgtgaaggagctgcccgagcacctgaagccctttgagacc 3619070
Query: 427 ctgctgtcccagaaccaggggggccaggccttcgtcgtgggcagccag 474
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3619069 ctgctgtcccagaaccaggggggccaggccttcgtcgtgggcagccag 3619022
Score = 210 bits (106), Expect = 8e-52
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 262 ggactgtatggaaaggaccagaaggaggcggccctggtggacatggtgaatgacggcgtg 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3620284 ggactgtatggaaaggaccagaaggaggcggccctggtggacatggtgaatgacggcgtg 3620225
Query: 322 gaggacctccgctgcaaatatgccaccctcatctacaccaactacg 367
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3620224 gaggacctccgctgcaaatatgccaccctcatctacaccaactacg 3620179
Score = 204 bits (103), Expect = 5e-50
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 72 agggcgctgcgaggccatgcgcatgctgctggccgaccaggatcagagctggaaggagga 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3620935 agggcgctgcgaggccatgcgcatgctgctggccgaccaggatcagagctggaaggagga 3620876
Query: 132 ggtggtgactatggagacctggcctcctctcaagccctcctgc 174
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3620875 ggtggtgactatggagacctggcctcctctcaagccctcctgc 3620833
Score = 176 bits (89), Expect = 1e-41
Identities = 89/89 (100%)
Strand = Plus / Minus
Query: 175 ctgttccggcagctcccgaagttccaggacggagacctcaccctgtaccagtccaatgcc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3620710 ctgttccggcagctcccgaagttccaggacggagacctcaccctgtaccagtccaatgcc 3620651
Query: 235 atcctgcgccacctgggccgctcctttgg 263
|||||||||||||||||||||||||||||
Sbjct: 3620650 atcctgcgccacctgggccgctcctttgg 3620622
Score = 149 bits (75), Expect = 3e-33
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 182 ggcagctcccgaagttccaggacggagacctcaccctgtaccagtccaatgccatcctgc 241
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3635911 ggcagctccccaagttccaggacggagacctcaccctgtaccagtccaatgccatcctgc 3635970
Query: 242 gccacctgggccgctcctt 260
|||||||||||||||||||
Sbjct: 3635971 gccacctgggccgctcctt 3635989
Score = 149 bits (75), Expect = 3e-33
Identities = 78/79 (98%)
Strand = Plus / Minus
Query: 182 ggcagctcccgaagttccaggacggagacctcaccctgtaccagtccaatgccatcctgc 241
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3726365 ggcagctccccaagttccaggacggagacctcaccctgtaccagtccaatgccatcctgc 3726306
Query: 242 gccacctgggccgctcctt 260
|||||||||||||||||||
Sbjct: 3726305 gccacctgggccgctcctt 3726287
Score = 117 bits (59), Expect = 9e-24
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 76 cgctgcgaggccatgcgcatgctgctggccgaccaggatcagagctggaaggaggaggtg 135
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 3635693 cgctgcgaggccatgcgcatgctgctggctgaccagggccagagctggaaggaggaggtg 3635752
Query: 136 gtgactatggagacctggc 154
||||| | |||||||||||
Sbjct: 3635753 gtgaccaaggagacctggc 3635771
Score = 117 bits (59), Expect = 9e-24
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 392 aggagctgcccgagcacctgaagccctttgagaccctgctgtcccagaaccaggggggcc 451
|||||||||| | |||||||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct: 3637157 aggagctgccggggcacctgaggccttttgagaccctgctgtcccagaaccagggcggcc 3637216
Query: 452 aggccttcgtcgtgggcagccag 474
|||||||| ||||||||||||||
Sbjct: 3637217 aggccttcatcgtgggcagccag 3637239
Score = 117 bits (59), Expect = 9e-24
Identities = 77/83 (92%)
Strand = Plus / Minus
Query: 392 aggagctgcccgagcacctgaagccctttgagaccctgctgtcccagaaccaggggggcc 451
|||||||||| | |||||||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct: 3725119 aggagctgccggggcacctgaggccttttgagaccctgctgtcccagaaccagggcggcc 3725060
Query: 452 aggccttcgtcgtgggcagccag 474
|||||||| ||||||||||||||
Sbjct: 3725059 aggccttcatcgtgggcagccag 3725037
Score = 117 bits (59), Expect = 9e-24
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 76 cgctgcgaggccatgcgcatgctgctggccgaccaggatcagagctggaaggaggaggtg 135
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 3726583 cgctgcgaggccatgcgcatgctgctggctgaccagggccagagctggaaggaggaggtg 3726524
Query: 136 gtgactatggagacctggc 154
||||| | |||||||||||
Sbjct: 3726523 gtgaccaaggagacctggc 3726505
Score = 81.8 bits (41), Expect = 5e-13
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 285 ggaggcggccctggtggacatggtgaatgacggcgtggaggacctccgc 333
||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 3636962 ggaggcggcgctgctggacatggtgaatgacggcgtggaggacctccgc 3637010
Score = 81.8 bits (41), Expect = 5e-13
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 285 ggaggcggccctggtggacatggtgaatgacggcgtggaggacctccgc 333
||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 3725314 ggaggcggcgctgctggacatggtgaatgacggcgtggaggacctccgc 3725266
Score = 73.8 bits (37), Expect = 1e-10
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 38 tgccgccttacacgatcacctacttccccgttcgagg 74
|||||||||||||||||||||||||||||||||||||
Sbjct: 3661965 tgccgccttacacgatcacctacttccccgttcgagg 3662001
Score = 73.8 bits (37), Expect = 1e-10
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 38 tgccgccttacacgatcacctacttccccgttcgagg 74
|||||||||||||||||||||||||||||||||||||
Sbjct: 3866728 tgccgccttacacgatcacctacttccccgttcgagg 3866692
Score = 65.9 bits (33), Expect = 3e-08
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 ggagctcagtcgccgcctctgctgccaccacca 37
|||||||||||||||||||||||||||||||||
Sbjct: 3661766 ggagctcagtcgccgcctctgctgccaccacca 3661798
Score = 65.9 bits (33), Expect = 3e-08
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 5 ggagctcagtcgccgcctctgctgccaccacca 37
|||||||||||||||||||||||||||||||||
Sbjct: 3866927 ggagctcagtcgccgcctctgctgccaccacca 3866895
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 19,717,854
Number of extensions: 515
Number of successful extensions: 515
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 515
Number of HSP's successfully gapped: 19
Length of query: 748
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 727
Effective length of database: 2,808,413,156
Effective search space: 2041716364412
Effective search space used: 2041716364412
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 17 (34.2 bits)
S2: 29 (58.0 bits)