Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007866
(1734 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001068838.1| kynurenine--oxoglutarate transaminase 3 [Bos... 649 0.0
Alignment gi|XP_001790564.1| PREDICTED: kynurenine aminotransferase I-lik... 394 e-109
Alignment gi|NP_001071446.1| kynurenine--oxoglutarate transaminase 1 [Bos... 394 e-109
Alignment gi|XP_002706546.1| PREDICTED: kynurenine aminotransferase I-lik... 385 e-107
Alignment gi|XP_001250330.1| PREDICTED: kynurenine aminotransferase I-lik... 385 e-107
Alignment gi|XP_002706547.1| PREDICTED: kynurenine aminotransferase I-lik... 365 e-101
Alignment gi|XP_590453.4| PREDICTED: kynurenine--oxoglutarate transaminas... 172 6e-43
Alignment gi|XP_002690271.1| PREDICTED: kynurenine--oxoglutarate transami... 171 2e-42
Alignment gi|NP_001029762.1| tyrosine aminotransferase [Bos taurus]. 78 2e-14
Alignment gi|NP_001015526.1| 1-aminocyclopropane-1-carboxylate synthase-l... 58 3e-08
>ref|NP_001068838.1| kynurenine--oxoglutarate transaminase 3 [Bos taurus].
Length = 455
Score = 649 bits (1674), Expect = 0.0
Identities = 315/377 (83%), Positives = 343/377 (90%), Gaps = 2/377 (0%)
Frame = +1
Query: 55 MFLAQRSLCNLGS--KVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLA 228
MFLA LC L K L+TV ASKILGLSTS +MS +FKNAKRIEGLDSN+W+EFT+LA
Sbjct: 1 MFLAWERLCTLSCRPKFLKTVWASKILGLSTSAKMSLRFKNAKRIEGLDSNIWIEFTKLA 60
Query: 229 ADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQK 408
ADP+VVNLGQGLPDISPP YVKE+LSKIAA+D++NQYTRGFGH SLVKALSCLY KFY
Sbjct: 61 ADPSVVNLGQGLPDISPPVYVKEELSKIAAIDNLNQYTRGFGHPSLVKALSCLYEKFYHN 120
Query: 409 QINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRS 588
+INP EEI+VTVGAYGSLFNAIQG I+EGDEVIV+VPF+DCY MV MAG TPVFVPLR
Sbjct: 121 KINPNEEILVTVGAYGSLFNAIQGLIDEGDEVIVIVPFFDCYESMVRMAGATPVFVPLRC 180
Query: 589 KPVDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHD 768
KPVDGK+ SSDWTLDPQELASKFNSKTKAIILNTPHNPLGKV+T+EELQVIADLCIK+D
Sbjct: 181 KPVDGKKCSSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVYTKEELQVIADLCIKYD 240
Query: 769 TLCISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIK 948
TLCISDEVYEW+VYTG KHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIK
Sbjct: 241 TLCISDEVYEWLVYTGNKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIK 300
Query: 949 HLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSA 1128
HLQTV QN+++ CATPLQEALAQA W+DIKRMD+PECYFNSLPKELE KRDRMV LL+S
Sbjct: 301 HLQTVQQNTVYTCATPLQEALAQAFWIDIKRMDDPECYFNSLPKELEVKRDRMVHLLESV 360
Query: 1129 GLRPIVPDGGYFIIADV 1179
GL+ IVPDGGYFIIADV
Sbjct: 361 GLKSIVPDGGYFIIADV 377
>ref|XP_001790564.1| PREDICTED: kynurenine aminotransferase I-like isoform 1 [Bos taurus].
Length = 425
Score = 394 bits (1013), Expect = e-109
Identities = 188/344 (54%), Positives = 249/344 (72%), Gaps = 3/344 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPT-VVNLGQGLPDISPPEYVKEKLSKIAAVDSM- 330
+K A+R++G+D N WVEF QLA++ VVNLGQG PD SPPE+ E + D M
Sbjct: 2 AKRLQARRLDGIDHNPWVEFVQLASEEADVVNLGQGFPDFSPPEFAVEAFQHAVSGDFML 61
Query: 331 NQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIV 510
NQYT+ FG+ L K L+ +GK ++I+P + ++VTVGAYG+LF A Q ++EGDEVI+
Sbjct: 62 NQYTKAFGYPPLTKILASFFGKLLGQEIDPLKNVLVTVGAYGALFTAFQALVDEGDEVII 121
Query: 511 MVPFYDCYGPMVSMAGGTPVFVPLRSKPVD-GKRWCSSDWTLDPQELASKFNSKTKAIIL 687
+ PF+DCY PM MAGG PVFV L+ P G+ SS+W LDP ELASKF S+TKA IL
Sbjct: 122 IEPFFDCYEPMTLMAGGRPVFVSLKPSPTQKGEPDSSSNWQLDPTELASKFTSRTKAFIL 181
Query: 688 NTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTI 867
NTP+NPLGKVF++EEL+++A LC +HD +CISDEVY+W+V+ G +H IA+ PGMWERT+
Sbjct: 182 NTPNNPLGKVFSKEELELVASLCQQHDVVCISDEVYQWMVFDGFQHISIASLPGMWERTL 241
Query: 868 TIGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMD 1047
TIGSAGKTFSVTGWK+GW +GP L+KHL+TV+QNSI+ CAT Q A+AQ+ +
Sbjct: 242 TIGSAGKTFSVTGWKVGWVLGPDSLMKHLRTVHQNSIYHCATQGQAAVAQSFEREQLHFG 301
Query: 1048 EPECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF LP+ ++ RD M++ L S G RP++P G YF+I D+
Sbjct: 302 RPSSYFVQLPQYIQRCRDHMIQSLQSMGFRPVIPQGSYFLITDI 345
>ref|NP_001071446.1| kynurenine--oxoglutarate transaminase 1 [Bos taurus].
Length = 425
Score = 394 bits (1011), Expect = e-109
Identities = 188/344 (54%), Positives = 249/344 (72%), Gaps = 3/344 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPT-VVNLGQGLPDISPPEYVKEKLSKIAAVDSM- 330
+K A+R++G+D N WVEF QLA++ VVNLGQG PD SPPE+ E + D M
Sbjct: 2 AKRLQARRLDGIDHNPWVEFVQLASEEADVVNLGQGFPDFSPPEFAVEAFQHAVSGDFML 61
Query: 331 NQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIV 510
NQYT+ FG+ L K L+ +GK ++I+P + ++VTVGAYG+LF A Q ++EGDEVI+
Sbjct: 62 NQYTKAFGYPPLTKILANFFGKLLGQEIDPLKNVLVTVGAYGALFTAFQALVDEGDEVII 121
Query: 511 MVPFYDCYGPMVSMAGGTPVFVPLRSKPVD-GKRWCSSDWTLDPQELASKFNSKTKAIIL 687
+ PF+DCY PM MAGG PVFV L+ P G+ SS+W LDP ELASKF S+TKA IL
Sbjct: 122 IEPFFDCYEPMTLMAGGRPVFVSLKPSPTQKGEPDSSSNWQLDPTELASKFTSRTKAFIL 181
Query: 688 NTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTI 867
NTP+NPLGKVF++EEL+++A LC +HD +CISDEVY+W+V+ G +H IA+ PGMWERT+
Sbjct: 182 NTPNNPLGKVFSKEELELVASLCQQHDVVCISDEVYQWMVFDGFQHISIASLPGMWERTL 241
Query: 868 TIGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMD 1047
TIGSAGKTFSVTGWK+GW +GP L+KHL+TV+QNSI+ CAT Q A+AQ+ +
Sbjct: 242 TIGSAGKTFSVTGWKVGWVLGPDSLMKHLRTVHQNSIYHCATQGQAAVAQSFEREQLHFG 301
Query: 1048 EPECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF LP+ ++ RD M++ L S G RP++P G YF+I D+
Sbjct: 302 RPSSYFVQLPQYIQRCRDHMIQSLQSMGFRPVIPQGSYFLITDI 345
>ref|XP_002706546.1| PREDICTED: kynurenine aminotransferase I-like isoform 1 [Bos taurus].
Length = 425
Score = 385 bits (990), Expect = e-107
Identities = 186/344 (54%), Positives = 248/344 (72%), Gaps = 3/344 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPT-VVNLGQGLPDISPPEYVKEKLSKIAAVDSM- 330
+K A+R++G+D + VEF QLA++ VVNLGQG PD SPPE+ E + D M
Sbjct: 2 AKRLQAQRLDGIDYSPRVEFVQLASEEADVVNLGQGFPDFSPPEFAVEAFQHAVSGDFML 61
Query: 331 NQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIV 510
NQYT+ FG+ L K L+ +GK ++I+P + ++VTVGAYG+LF A Q ++EGDEVI+
Sbjct: 62 NQYTKAFGYPPLTKILANFFGKLLGQEIDPLKNVLVTVGAYGALFTAFQALVDEGDEVII 121
Query: 511 MVPFYDCYGPMVSMAGGTPVFVPLRSKPVD-GKRWCSSDWTLDPQELASKFNSKTKAIIL 687
+ PF+DCY PM MAGG PVFV L+ P G+ SS+W LDP ELASKF S+TKA IL
Sbjct: 122 IEPFFDCYEPMTLMAGGRPVFVSLKPSPTQKGEPDSSSNWQLDPTELASKFTSRTKAFIL 181
Query: 688 NTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTI 867
NTP+NPLGKVF++EEL+++A LC +HD +CISDEVY+W+V+ G +H IA+ PGMWERT+
Sbjct: 182 NTPNNPLGKVFSKEELELVASLCQQHDVVCISDEVYQWMVFDGFQHISIASLPGMWERTL 241
Query: 868 TIGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMD 1047
TIGSAGKTFSVTGWK+GW +GP L+KHL+TV+QNSI+ CAT Q A+AQ+ +
Sbjct: 242 TIGSAGKTFSVTGWKVGWVLGPDSLMKHLRTVHQNSIYHCATQGQAAVAQSFEREQLHFG 301
Query: 1048 EPECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF LP+ ++ RD M++ L S G RP++P G YF+I D+
Sbjct: 302 RPSSYFVQLPQYIQRCRDHMIQSLQSMGFRPVIPQGSYFLITDI 345
>ref|XP_001250330.1| PREDICTED: kynurenine aminotransferase I-like [Bos taurus].
Length = 425
Score = 385 bits (990), Expect = e-107
Identities = 186/344 (54%), Positives = 248/344 (72%), Gaps = 3/344 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPT-VVNLGQGLPDISPPEYVKEKLSKIAAVDSM- 330
+K A+R++G+D + VEF QLA++ VVNLGQG PD SPPE+ E + D M
Sbjct: 2 AKRLQAQRLDGIDYSPRVEFVQLASEEADVVNLGQGFPDFSPPEFAVEAFQHAVSGDFML 61
Query: 331 NQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIV 510
NQYT+ FG+ L K L+ +GK ++I+P + ++VTVGAYG+LF A Q ++EGDEVI+
Sbjct: 62 NQYTKAFGYPPLTKILANFFGKLLGQEIDPLKNVLVTVGAYGALFTAFQALVDEGDEVII 121
Query: 511 MVPFYDCYGPMVSMAGGTPVFVPLRSKPVD-GKRWCSSDWTLDPQELASKFNSKTKAIIL 687
+ PF+DCY PM MAGG PVFV L+ P G+ SS+W LDP ELASKF S+TKA IL
Sbjct: 122 IEPFFDCYEPMTLMAGGRPVFVSLKPSPTQKGEPDSSSNWQLDPTELASKFTSRTKAFIL 181
Query: 688 NTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTI 867
NTP+NPLGKVF++EEL+++A LC +HD +CISDEVY+W+V+ G +H IA+ PGMWERT+
Sbjct: 182 NTPNNPLGKVFSKEELELVASLCQQHDVVCISDEVYQWMVFDGFQHISIASLPGMWERTL 241
Query: 868 TIGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMD 1047
TIGSAGKTFSVTGWK+GW +GP L+KHL+TV+QNSI+ CAT Q A+AQ+ +
Sbjct: 242 TIGSAGKTFSVTGWKVGWVLGPDSLMKHLRTVHQNSIYHCATQGQAAVAQSFEREQLHFG 301
Query: 1048 EPECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF LP+ ++ RD M++ L S G RP++P G YF+I D+
Sbjct: 302 RPSSYFVQLPQYIQRCRDHMIQSLQSMGFRPVIPQGSYFLITDI 345
>ref|XP_002706547.1| PREDICTED: kynurenine aminotransferase I-like isoform 2 [Bos taurus].
Length = 402
Score = 365 bits (936), Expect = e-101
Identities = 180/344 (52%), Positives = 239/344 (69%), Gaps = 3/344 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPT-VVNLGQGLPDISPPEYVKEKLSKIAAVDSM- 330
+K A+R++G+D + VEF QLA++ VVNLGQG PD SPPE+ E + D M
Sbjct: 2 AKRLQAQRLDGIDYSPRVEFVQLASEEADVVNLGQGFPDFSPPEFAVEAFQHAVSGDFML 61
Query: 331 NQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIV 510
NQYT+ FG+ L K L+ +GK ++I+P + ++VTVGAYG+LF A Q ++EGDEVI+
Sbjct: 62 NQYTKAFGYPPLTKILANFFGKLLGQEIDPLKNVLVTVGAYGALFTAFQALVDEGDEVII 121
Query: 511 MVPFYDCYGPMVSMAGGTPVFVPLRSKPVD-GKRWCSSDWTLDPQELASKFNSKTKAIIL 687
+ PF+DCY PM MAGG PVFV L+ P G+ SS+W LDP ELASKF S+TKA IL
Sbjct: 122 IEPFFDCYEPMTLMAGGRPVFVSLKPSPTQKGEPDSSSNWQLDPTELASKFTSRTKAFIL 181
Query: 688 NTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTI 867
NTP+NPLGKVF++EEL+++A LC +HD +CISDEVY+W+V+ G +H IA+ PGMWERT+
Sbjct: 182 NTPNNPLGKVFSKEELELVASLCQQHDVVCISDEVYQWMVFDGFQHISIASLPGMWERTL 241
Query: 868 TIGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMD 1047
TIGSAGKTFSVTGWK+GW +GP L+KHL+TV+QNSI+ CAT Q
Sbjct: 242 TIGSAGKTFSVTGWKVGWVLGPDSLMKHLRTVHQNSIYHCATQGQ--------------- 286
Query: 1048 EPECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
LP+ ++ RD M++ L S G RP++P G YF+I D+
Sbjct: 287 --------LPQYIQRCRDHMIQSLQSMGFRPVIPQGSYFLITDI 322
>ref|XP_590453.4| PREDICTED: kynurenine--oxoglutarate transaminase 3-like [Bos taurus].
Length = 281
Score = 172 bits (437), Expect = 6e-43
Identities = 79/95 (83%), Positives = 87/95 (91%)
Frame = +1
Query: 895 SVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSL 1074
S G+KLGWSIGPKHLIKHLQTV QN+++ CATPLQEALAQA W+DIKRMD+PECYFNSL
Sbjct: 109 SANGFKLGWSIGPKHLIKHLQTVQQNTVYTCATPLQEALAQAFWIDIKRMDDPECYFNSL 168
Query: 1075 PKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
PKELE KRDRMV LL+S GL+PIVPDGGYFIIADV
Sbjct: 169 PKELEVKRDRMVHLLESVGLKPIVPDGGYFIIADV 203
>ref|XP_002690271.1| PREDICTED: kynurenine--oxoglutarate transaminase 3-like, partial [Bos
taurus].
Length = 170
Score = 171 bits (433), Expect = 2e-42
Identities = 78/92 (84%), Positives = 86/92 (93%)
Frame = +1
Query: 904 GWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKE 1083
G+KLGWSIGPKHLIKHLQTV QN+++ CATPLQEALAQA W+DIKRMD+PECYFNSLPKE
Sbjct: 1 GFKLGWSIGPKHLIKHLQTVQQNTVYTCATPLQEALAQAFWIDIKRMDDPECYFNSLPKE 60
Query: 1084 LEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
LE KRDRMV LL+S GL+PIVPDGGYFIIADV
Sbjct: 61 LEVKRDRMVHLLESVGLKPIVPDGGYFIIADV 92
>ref|NP_001029762.1| tyrosine aminotransferase [Bos taurus].
Length = 447
Score = 78.2 bits (191), Expect = 2e-14
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 15/378 (3%)
Frame = +1
Query: 91 SKVLRTVSASKILGLSTSTEMSSKFKNAKR--IEGLDSNVWVEFTQLA---ADPTVVNLG 255
S VL V + K ++MS+K N R ++ + T +A DPTV
Sbjct: 21 SSVLGKVKSRKARWSVRPSDMSNKTFNPIRAIVDNMKVKPNPNKTMIALSIGDPTVFG-- 78
Query: 256 QGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQKQINPTE--E 429
LP + PE V + + N Y G+LS + ++ +Y P E +
Sbjct: 79 -NLP--TDPE-VTQAMKDALDSGKFNGYVPSIGYLSSREEVA----SYYHCPEAPLEAKD 130
Query: 430 IVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKR 609
+++T G ++ + G ++V P + Y + G L +
Sbjct: 131 VILTSGCSQAIELCLAVLANPGQNILVPRPGFSLYRTLAESMGIEVKLYNLLPE------ 184
Query: 610 WCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTLCISDE 789
+W +D ++L S + KT +I+N P NP G VF+R LQ I + + ++DE
Sbjct: 185 ---KNWEIDLKQLESLIDEKTVCLIVNNPSNPCGSVFSRRHLQKILAVAARQCVPILADE 241
Query: 790 VYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGW-------SIGPKHLIK 948
+Y +V++ K +AT ++ G K + V GW++GW I +
Sbjct: 242 IYGDMVFSDSKFEPLATLSSK-VPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRD 300
Query: 949 HLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDS- 1125
L ++Q + C T +Q AL L P ++++ L+ D L +
Sbjct: 301 GLTKLSQRILGPC-TLVQGALKSIL------CRTPRVFYHNTLSFLKSNADLCYGALAAI 353
Query: 1126 AGLRPIVPDGGYFIIADV 1179
GLRPI P G +++ +
Sbjct: 354 PGLRPIHPSGAMYLMVGI 371
>ref|NP_001015526.1| 1-aminocyclopropane-1-carboxylate synthase-like protein 1 [Bos
taurus].
Length = 502
Score = 57.8 bits (138), Expect = 3e-08
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 10/205 (4%)
Frame = +1
Query: 334 QYTRGFGHLSLVKALSCLYGKFYQKQINPTE-EIVVTVGAYGSLFNAIQGFI-EEGDEVI 507
QY GHL L + ++ + FY + P + E VV + SLF+A+ + E G+ +
Sbjct: 132 QYPDWRGHLFLREEVA-RFLSFYCRSPAPLKPENVVVLNGCASLFSALATVLCEAGEAFL 190
Query: 508 VMVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELASK-FNS---KTK 675
+ P+Y V + G + V G T++ E+A + NS K K
Sbjct: 191 IPAPYYGAITQHVYLYGNVRLVCVYLDSEVTGLETRPFQLTVEKLEMALQGANSEGVKVK 250
Query: 676 AIILNTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFK----IATF 843
+IL P NPLG +++ ELQ + +H+ + DEVY V+ ++ +
Sbjct: 251 GLILINPQNPLGDIYSPGELQEYLEFAKRHELHVMVDEVYMLSVFEESAGYRSVLSLERL 310
Query: 844 PGMWERTITIGSAGKTFSVTGWKLG 918
P +RT + + K F ++G + G
Sbjct: 311 PDP-QRTHVMWATSKDFGMSGLRFG 334
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 66,139,090
Number of extensions: 1725722
Number of successful extensions: 4985
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 4956
Number of HSP's successfully gapped: 11
Length of query: 578
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 470
Effective length of database: 14,107,870
Effective search space: 6630698900
Effective search space used: 6630698900
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007866
(1734 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537084.1| PREDICTED: similar to kynurenine aminotransfera... 658 0.0
Alignment gi|XP_867236.1| PREDICTED: similar to kynurenine aminotransfera... 405 e-113
Alignment gi|XP_548431.2| PREDICTED: similar to Kynurenine--oxoglutarate ... 386 e-107
Alignment gi|XP_536796.2| PREDICTED: similar to Tyrosine aminotransferase... 78 3e-14
Alignment gi|XP_854150.1| PREDICTED: similar to 1-aminocyclopropane-1-car... 60 9e-09
>ref|XP_537084.1| PREDICTED: similar to kynurenine aminotransferase III isoform 1
isoform 1 [Canis familiaris].
Length = 455
Score = 658 bits (1697), Expect = 0.0
Identities = 315/377 (83%), Positives = 345/377 (91%), Gaps = 2/377 (0%)
Frame = +1
Query: 55 MFLAQRSLCNLGS--KVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLA 228
MFLAQR C+L S K L+T+ +SKILGL TS +MS K NAKRIEGLDSNVW+EFT+LA
Sbjct: 1 MFLAQRRFCSLESRAKFLKTIYSSKILGLPTSAKMSLKITNAKRIEGLDSNVWIEFTKLA 60
Query: 229 ADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQK 408
ADP+VVNLGQGLPDISPP YVKE+LSKIAA+DS+NQYTRGFGH SLVKALSCLY KFYQ
Sbjct: 61 ADPSVVNLGQGLPDISPPIYVKEELSKIAAIDSLNQYTRGFGHPSLVKALSCLYEKFYQN 120
Query: 409 QINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRS 588
INP +EI+VT+GAYGSLFNAIQG I+EGDEVI++VPFYDCY PMV MAGGTPVF+PLRS
Sbjct: 121 PINPNKEILVTIGAYGSLFNAIQGLIDEGDEVIIIVPFYDCYEPMVRMAGGTPVFIPLRS 180
Query: 589 KPVDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHD 768
KPVDGK+W SSDWTLDPQELASKFNSKTKAIILNTPHNP+GKV+T+EELQVIADLCIK+D
Sbjct: 181 KPVDGKKWSSSDWTLDPQELASKFNSKTKAIILNTPHNPIGKVYTKEELQVIADLCIKYD 240
Query: 769 TLCISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIK 948
TLCISDEVYEW+VYTG KH KIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGP HLIK
Sbjct: 241 TLCISDEVYEWLVYTGNKHLKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPNHLIK 300
Query: 949 HLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSA 1128
HLQTV QN+I+ CATPLQEALAQA W+DIKRMDEPECYFNSLPKELE KRDRM+ L +S
Sbjct: 301 HLQTVQQNTIYTCATPLQEALAQAFWIDIKRMDEPECYFNSLPKELEVKRDRMIHLFESL 360
Query: 1129 GLRPIVPDGGYFIIADV 1179
GL+PIVPDGGYFIIADV
Sbjct: 361 GLKPIVPDGGYFIIADV 377
>ref|XP_867236.1| PREDICTED: similar to kynurenine aminotransferase III isoform 1
isoform 2 [Canis familiaris].
Length = 291
Score = 405 bits (1040), Expect = e-113
Identities = 188/213 (88%), Positives = 201/213 (94%)
Frame = +1
Query: 541 MVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVF 720
MV MAGGTPVF+PLRSKPVDGK+W SSDWTLDPQELASKFNSKTKAIILNTPHNP+GKV+
Sbjct: 1 MVRMAGGTPVFIPLRSKPVDGKKWSSSDWTLDPQELASKFNSKTKAIILNTPHNPIGKVY 60
Query: 721 TREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSV 900
T+EELQVIADLCIK+DTLCISDEVYEW+VYTG KH KIATFPGMWERTITIGSAGKTFSV
Sbjct: 61 TKEELQVIADLCIKYDTLCISDEVYEWLVYTGNKHLKIATFPGMWERTITIGSAGKTFSV 120
Query: 901 TGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPK 1080
TGWKLGWSIGP HLIKHLQTV QN+I+ CATPLQEALAQA W+DIKRMDEPECYFNSLPK
Sbjct: 121 TGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAFWIDIKRMDEPECYFNSLPK 180
Query: 1081 ELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
ELE KRDRM+ L +S GL+PIVPDGGYFIIADV
Sbjct: 181 ELEVKRDRMIHLFESLGLKPIVPDGGYFIIADV 213
>ref|XP_548431.2| PREDICTED: similar to Kynurenine--oxoglutarate transaminase I
(Kynurenine aminotransferase I) (KATI)
(Glutamine--phenylpyruvate transaminase) (Glutamine
transaminase K) (GTK) (Cysteine-S-conjugate beta-lyase)
[Canis familiaris].
Length = 424
Score = 386 bits (991), Expect = e-107
Identities = 177/338 (52%), Positives = 246/338 (72%), Gaps = 2/338 (0%)
Frame = +1
Query: 172 AKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM-NQYTRG 348
A+R++G+D N WVE T++A++ VNLGQG PD PP++ + + D M NQYT+
Sbjct: 7 ARRLDGIDHNPWVECTKMASEYDAVNLGQGFPDFPPPDFALQAFQLALSSDFMLNQYTKA 66
Query: 349 FGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYD 528
FG+ L K L+ +GK ++I+P + ++VTVGAYG+LF A Q ++EGDEVI++ PF+D
Sbjct: 67 FGYPPLTKILASFFGKLLGQEIDPLKNVLVTVGAYGALFTAFQALVDEGDEVIIIEPFFD 126
Query: 529 CYGPMVSMAGGTPVFVPLRSKPV-DGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNP 705
CY PM MAGG PVFV L+ P DG+ +S+W LDP ELASKF S+TKA+ILNTP+NP
Sbjct: 127 CYEPMTLMAGGHPVFVTLKPSPTQDGELDSASNWQLDPTELASKFTSRTKALILNTPNNP 186
Query: 706 LGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAG 885
+GKVF++ EL+++A+LC +HD +CI+DEVY+W+VY G +H IA+ PGMWERT+TIGSAG
Sbjct: 187 VGKVFSKAELELVANLCQQHDVICITDEVYQWLVYDGYQHTSIASLPGMWERTLTIGSAG 246
Query: 886 KTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYF 1065
K+FS TGWK+GW +GP L+KHL+TV+QNSI+ C T Q A+AQ+ + +P YF
Sbjct: 247 KSFSATGWKVGWVLGPDSLVKHLRTVHQNSIYHCPTQGQAAVAQSFQHEQLHFGQPSSYF 306
Query: 1066 NSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P+ ++ RD M+R L S GL+P++P G YF IAD+
Sbjct: 307 VQFPQAMQRCRDHMIRSLQSVGLKPVIPQGSYFFIADI 344
>ref|XP_536796.2| PREDICTED: similar to Tyrosine aminotransferase
(L-tyrosine:2-oxoglutarate aminotransferase) (TAT) [Canis
familiaris].
Length = 454
Score = 77.8 bits (190), Expect = 3e-14
Identities = 80/326 (24%), Positives = 135/326 (41%), Gaps = 10/326 (3%)
Frame = +1
Query: 232 DPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQKQ 411
DPTV LP + PE V + + N Y G+LS + ++ +Y +
Sbjct: 80 DPTVFG---NLP--TDPE-VTQAMKDALDSGKYNGYAPSIGYLSSREEIA----SYYHRP 129
Query: 412 INPTE--EIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLR 585
P E ++++T G ++ + G ++V P + Y + G L
Sbjct: 130 EAPLEAKDVILTSGCSQAIELCLAVLANPGQNILVPRPGFSLYRTLAESMGIEVKLYNLL 189
Query: 586 SKPVDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKH 765
+ W +D ++L S + KT +I+N P NP G VF++ LQ I + +
Sbjct: 190 PE---------KSWEIDLKQLESLIDEKTACLIVNNPSNPCGSVFSKSHLQKILAVAARQ 240
Query: 766 DTLCISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGW-------S 924
++DE+Y +V++ K +AT ++ G K + V GW+LGW
Sbjct: 241 CVPILADEIYGDMVFSDSKFEPLATLSSN-VPILSCGGLAKRWLVPGWRLGWILIHDRRD 299
Query: 925 IGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDR 1104
I + L ++Q + C T +Q AL L R E Y N+L L+ D
Sbjct: 300 IFGNEIRDGLVKLSQRILGPC-TIVQGALKSIL-----RRTPQEFYQNTL-SFLKSNADL 352
Query: 1105 MVRLLDS-AGLRPIVPDGGYFIIADV 1179
L + GLRP+ P G +++ +
Sbjct: 353 CYGALAAIPGLRPVRPSGAMYLMVGI 378
>ref|XP_854150.1| PREDICTED: similar to 1-aminocyclopropane-1-carboxylate synthase
[Canis familiaris].
Length = 603
Score = 59.7 bits (143), Expect = 9e-09
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Frame = +1
Query: 325 SMNQYTRGFGHLSLVKALSCLYGKFYQKQINPTE-EIVVTVGAYGSLFNAIQGFI-EEGD 498
S+ QY GHL L + ++ + FY K P + E VV + SLF+A+ + E G+
Sbjct: 127 SLLQYPDWRGHLFLREEVA-RFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLCEVGE 185
Query: 499 EVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELASKF----NS 666
++ P+Y V + G + V G T++ E+A +
Sbjct: 186 AFLIPAPYYGAITQHVCLYGNVRLVCVHLDSEVTGLDTRPFQLTVEKLEMALQRAHSEGV 245
Query: 667 KTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVY-TGKKHFKIATF 843
K K +IL PHNPLG +++ EL+ + +H+ + DEVY V+ + + +
Sbjct: 246 KVKGLILINPHNPLGDIYSPGELRDYLEFAKRHELHVMVDEVYMLSVFEKSAAYCSVLSL 305
Query: 844 PGM--WERTITIGSAGKTFSVTGWKLG 918
G+ +RT + + K F ++G + G
Sbjct: 306 EGLPDPQRTHVMWATSKDFGMSGLRFG 332
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 69,055,569
Number of extensions: 1778596
Number of successful extensions: 4836
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4823
Number of HSP's successfully gapped: 5
Length of query: 578
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 470
Effective length of database: 15,274,216
Effective search space: 7178881520
Effective search space used: 7178881520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007866
(1734 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001929419.2| PREDICTED: kynurenine--oxoglutarate transami... 763 0.0
Alignment gi|XP_003125974.1| PREDICTED: kynurenine--oxoglutarate transami... 763 0.0
Alignment gi|XP_003122257.1| PREDICTED: kynurenine--oxoglutarate transami... 393 e-109
Alignment gi|XP_003353726.1| PREDICTED: kynurenine--oxoglutarate transami... 320 1e-87
Alignment gi|XP_003122900.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 70 4e-12
>ref|XP_001929419.2| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 1 [Sus
scrofa].
Length = 453
Score = 763 bits (1971), Expect = 0.0
Identities = 375/375 (100%), Positives = 375/375 (100%)
Frame = +1
Query: 55 MFLAQRSLCNLGSKVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLAAD 234
MFLAQRSLCNLGSKVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLAAD
Sbjct: 1 MFLAQRSLCNLGSKVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLAAD 60
Query: 235 PTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQKQI 414
PTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQKQI
Sbjct: 61 PTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQKQI 120
Query: 415 NPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKP 594
NPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKP
Sbjct: 121 NPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKP 180
Query: 595 VDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTL 774
VDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTL
Sbjct: 181 VDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTL 240
Query: 775 CISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIKHL 954
CISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIKHL
Sbjct: 241 CISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIKHL 300
Query: 955 QTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSAGL 1134
QTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSAGL
Sbjct: 301 QTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSAGL 360
Query: 1135 RPIVPDGGYFIIADV 1179
RPIVPDGGYFIIADV
Sbjct: 361 RPIVPDGGYFIIADV 375
>ref|XP_003125974.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 2 [Sus
scrofa].
Length = 453
Score = 763 bits (1971), Expect = 0.0
Identities = 375/375 (100%), Positives = 375/375 (100%)
Frame = +1
Query: 55 MFLAQRSLCNLGSKVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLAAD 234
MFLAQRSLCNLGSKVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLAAD
Sbjct: 1 MFLAQRSLCNLGSKVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLAAD 60
Query: 235 PTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQKQI 414
PTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQKQI
Sbjct: 61 PTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQKQI 120
Query: 415 NPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKP 594
NPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKP
Sbjct: 121 NPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKP 180
Query: 595 VDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTL 774
VDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTL
Sbjct: 181 VDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTL 240
Query: 775 CISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIKHL 954
CISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIKHL
Sbjct: 241 CISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIKHL 300
Query: 955 QTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSAGL 1134
QTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSAGL
Sbjct: 301 QTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSAGL 360
Query: 1135 RPIVPDGGYFIIADV 1179
RPIVPDGGYFIIADV
Sbjct: 361 RPIVPDGGYFIIADV 375
>ref|XP_003122257.1| PREDICTED: kynurenine--oxoglutarate transaminase 1 isoform 1 [Sus
scrofa].
Length = 458
Score = 393 bits (1009), Expect = e-109
Identities = 182/343 (53%), Positives = 247/343 (72%), Gaps = 2/343 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM-N 333
+K A+R++G+D N WVEF +LA++ VVNLGQG PD PP++ E + D M N
Sbjct: 36 AKRLQARRLDGIDHNPWVEFVKLASEADVVNLGQGFPDFPPPDFALEAFQHAVSGDFMLN 95
Query: 334 QYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVM 513
QYT+ FG+ L K L+ +GK ++++P + ++VTVGAYG+LF A Q ++EGDEVI++
Sbjct: 96 QYTKAFGYPPLTKILASFFGKLLGQELDPLKNVLVTVGAYGALFTAFQALVDEGDEVIII 155
Query: 514 VPFYDCYGPMVSMAGGTPVFVPLRSKPV-DGKRWCSSDWTLDPQELASKFNSKTKAIILN 690
PF+DCY PM MAGG PVFV L+ P DG+ SS+W LDP ELASKF +TKA++LN
Sbjct: 156 EPFFDCYEPMTLMAGGLPVFVSLKPSPAQDGELDSSSNWQLDPMELASKFTPRTKALVLN 215
Query: 691 TPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTIT 870
TP+NPLGKVF++ EL+++A LC +HD +CI+DEVY+W+VY +H IA+ PGMWERT+T
Sbjct: 216 TPNNPLGKVFSKPELELVASLCQQHDVVCIADEVYQWLVYDQYQHISIASLPGMWERTLT 275
Query: 871 IGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDE 1050
+GSAGKTFS TGWK+GW +GP L++HL+TV+QNS+F C T Q A+AQ+ + +
Sbjct: 276 VGSAGKTFSATGWKVGWVLGPDRLLRHLRTVHQNSVFHCPTQAQAAVAQSFEREQLHFGQ 335
Query: 1051 PECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF LP+ ++ RD MV+ L S GLRPIVP G YF+I DV
Sbjct: 336 PSSYFVQLPQAVQRSRDHMVQSLQSVGLRPIVPQGSYFLIIDV 378
>ref|XP_003353726.1| PREDICTED: kynurenine--oxoglutarate transaminase 1 [Sus scrofa].
Length = 374
Score = 320 bits (821), Expect = 1e-87
Identities = 160/343 (46%), Positives = 212/343 (61%), Gaps = 2/343 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM-N 333
+K A+R++G+D N WVEF +LA++ VVNLGQG PD PP++ E + D M N
Sbjct: 2 AKRLQARRLDGIDHNPWVEFVKLASEADVVNLGQGFPDFPPPDFALEAFQHAVSGDFMLN 61
Query: 334 QYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVM 513
QYT+ F VI++
Sbjct: 62 QYTKAF--------------------------------------------------VIII 71
Query: 514 VPFYDCYGPMVSMAGGTPVFVPLRSKPV-DGKRWCSSDWTLDPQELASKFNSKTKAIILN 690
PF+DCY PM MAGG PVFV L+ P DG+ SS+W LDP ELASKF +TKA++LN
Sbjct: 72 EPFFDCYEPMTLMAGGLPVFVSLKPSPAQDGELDSSSNWQLDPMELASKFTPRTKALVLN 131
Query: 691 TPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTIT 870
TP+NPLGKVF++ EL+++A LC +HD +CI+DEVY+W+VY +H IA+ PGMWERT+T
Sbjct: 132 TPNNPLGKVFSKPELELVASLCQQHDVVCIADEVYQWLVYDQYQHISIASLPGMWERTLT 191
Query: 871 IGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDE 1050
+GSAGKTFS TGWK+GW +GP L++HL+TV+QNS+F C T Q A+AQ+ + +
Sbjct: 192 VGSAGKTFSATGWKVGWVLGPDRLLRHLRTVHQNSVFHCPTQAQAAVAQSFEREQLHFGQ 251
Query: 1051 PECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF LP+ ++ RD MV+ L S GLRPIVP G YF+I DV
Sbjct: 252 PSSYFVQLPQAVQRSRDHMVQSLQSVGLRPIVPQGSYFLIIDV 294
>ref|XP_003122900.1| PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like protein
1-like [Sus scrofa].
Length = 506
Score = 70.1 bits (170), Expect = 4e-12
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Frame = +1
Query: 325 SMNQYTRGFGHLSLVKALSCLYGKFYQKQINPTE-EIVVTVGAYGSLFNAIQGFI-EEGD 498
S+ QY GHL L + ++ + FY K P + E VV + SLF+A+ + E G+
Sbjct: 129 SLLQYPDWRGHLFLREEVA-RFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLCEAGE 187
Query: 499 EVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELASK-FNS--- 666
++ P+Y V + GG + V G T++ E+A + NS
Sbjct: 188 AFLIPAPYYGSITQHVCLYGGVRLVCVYLDSEVTGLETRPFQLTVEKLEMALQGANSEGV 247
Query: 667 KTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHF----KI 834
K K +IL PHNPLG V++ ELQ D +H+ I DE+Y V+ F +
Sbjct: 248 KVKGLILINPHNPLGDVYSLGELQEYLDFAKRHELHVIVDEIYLLSVFEKSVEFHSVLSL 307
Query: 835 ATFPGMWERTITIGSAGKTFSVTGWKLG 918
P +RT + +A K F ++G + G
Sbjct: 308 ERLPDS-QRTHVMWAASKDFGMSGIRFG 334
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 42,495,563
Number of extensions: 1099470
Number of successful extensions: 3084
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3071
Number of HSP's successfully gapped: 6
Length of query: 578
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 474
Effective length of database: 8,754,644
Effective search space: 4149701256
Effective search space used: 4149701256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007866
(1734 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776124.1| kynurenine--oxoglutarate transaminase 3 [Mus mu... 604 e-173
Alignment gi|NP_765992.2| kynurenine--oxoglutarate transaminase 1 [Mus mu... 386 e-107
Alignment gi|NP_666326.1| tyrosine aminotransferase [Mus musculus]. 72 1e-12
Alignment gi|NP_899043.1| 1-aminocyclopropane-1-carboxylate synthase-like... 63 8e-10
Alignment gi|NP_035964.1| kynurenine/alpha-aminoadipate aminotransferase,... 50 7e-06
>ref|NP_776124.1| kynurenine--oxoglutarate transaminase 3 [Mus musculus].
Length = 420
Score = 604 bits (1557), Expect = e-173
Identities = 283/343 (82%), Positives = 311/343 (90%)
Frame = +1
Query: 151 MSSKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM 330
M+ KFKNAKRIEGLDSNVWVEFT+LAADP+VVNLGQG PDISPP YVKE+LSK A +D+M
Sbjct: 1 MALKFKNAKRIEGLDSNVWVEFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNM 60
Query: 331 NQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIV 510
NQYTRGFGH +LVKALSCLYGK YQ+QI+P EEI+V VGAYGSLFN+IQG ++ GDEVI+
Sbjct: 61 NQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVII 120
Query: 511 MVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELASKFNSKTKAIILN 690
MVPFYDCY PMV MAG PVF+PLRSKP DG +W SSDWT DP+EL SKF+SKTKAIILN
Sbjct: 121 MVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILN 180
Query: 691 TPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTIT 870
TPHNPLGKV+TR+ELQVIADLC+KHDTLCISDEVYEW+VYTG H KIAT PGMWERTIT
Sbjct: 181 TPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTIT 240
Query: 871 IGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDE 1050
IGSAGKTFSVTGWKLGWSIGP HLIKHLQTV QNS + CATPLQ ALA+A W+DIKRMD+
Sbjct: 241 IGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDD 300
Query: 1051 PECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
PECYFNSLPKELE KRDRMVRLL+S GL+PIVPDGGYFIIADV
Sbjct: 301 PECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADV 343
>ref|NP_765992.2| kynurenine--oxoglutarate transaminase 1 [Mus musculus].
Length = 424
Score = 386 bits (991), Expect = e-107
Identities = 179/343 (52%), Positives = 246/343 (71%), Gaps = 2/343 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM-N 333
SK A+R+EG+D N WVEFT+L+ + VVNLGQG PD SPP++ + + + M N
Sbjct: 2 SKQLQARRLEGIDHNPWVEFTRLSKEYDVVNLGQGFPDFSPPDFAVQAFQQATTGNFMLN 61
Query: 334 QYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVM 513
QYT FG+ L K L+ +GK ++++P + ++VTVGAYG+LF A Q ++EGDEVI++
Sbjct: 62 QYTSAFGYPPLTKILASFFGKLLGQEMDPLKNVLVTVGAYGALFTAFQALVDEGDEVIII 121
Query: 514 VPFYDCYGPMVSMAGGTPVFVPLRSKPVD-GKRWCSSDWTLDPQELASKFNSKTKAIILN 690
P ++CY PM MAGG PVFV LR P G+ S+DW LDP ELASKF +TK ++LN
Sbjct: 122 EPAFNCYEPMTMMAGGRPVFVSLRLSPAPKGQLGSSNDWQLDPTELASKFTPRTKILVLN 181
Query: 691 TPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTIT 870
TP+NPLGKVF+++EL+++A LC +HD LC SDEVY+W+VY G +H IA+ PGMWERT+T
Sbjct: 182 TPNNPLGKVFSKKELELVAALCQQHDVLCFSDEVYQWLVYDGHQHISIASLPGMWERTLT 241
Query: 871 IGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDE 1050
IGSAGK+FS TGWK+GW +GP +++KHL+TV+QNSIF C T Q A+AQ + + +
Sbjct: 242 IGSAGKSFSATGWKVGWVMGPDNIMKHLRTVHQNSIFHCPTQAQAAVAQCFEREQQHFGQ 301
Query: 1051 PECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF LP+ + RD M++ L S GL+P++P G YF+IAD+
Sbjct: 302 PSSYFLQLPQAMGLNRDHMIQSLQSVGLKPLIPQGSYFLIADI 344
>ref|NP_666326.1| tyrosine aminotransferase [Mus musculus].
Length = 454
Score = 72.0 bits (175), Expect = 1e-12
Identities = 72/329 (21%), Positives = 135/329 (41%), Gaps = 15/329 (4%)
Frame = +1
Query: 238 TVVNLGQGLPDI-----SPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFY 402
TV++L G P + + PE V + + N Y G+LS + ++ +Y
Sbjct: 72 TVISLSIGDPTVFGNLPTDPE-VTQAMKDALDSGKYNGYAPSIGYLSSREEVA----SYY 126
Query: 403 QKQINPTE--EIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFV 576
P E ++++T G ++ + G +++ P + Y + G
Sbjct: 127 HCPEAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLY 186
Query: 577 PLRSKPVDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLC 756
L + W +D ++L S + KT +++N P NP G VF++ LQ I +
Sbjct: 187 NLLPE---------KSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVA 237
Query: 757 IKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGW----- 921
+ ++DE+Y +V++ K+ +AT ++ G K + V GW+LGW
Sbjct: 238 ERQCVPILADEIYGDMVFSDCKYEPMATL-STNVPILSCGGLAKRWLVPGWRLGWILIHD 296
Query: 922 --SIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGK 1095
I + L ++Q + C T +Q AL L P+ ++ L+
Sbjct: 297 RRDIFGNEIRDGLVKLSQRILGPC-TIVQGALKSIL------QRTPQEFYQDTLSFLKSN 349
Query: 1096 RDRMVRLLDS-AGLRPIVPDGGYFIIADV 1179
D L + GL+P+ P G +++ +
Sbjct: 350 ADLCYGALSAIPGLQPVRPSGAMYLMVGI 378
>ref|NP_899043.1| 1-aminocyclopropane-1-carboxylate synthase-like protein 1 [Mus
musculus].
Length = 479
Score = 62.8 bits (151), Expect = 8e-10
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Frame = +1
Query: 325 SMNQYTRGFGHLSLVKALSCLYGKFYQKQINPTE-EIVVTVGAYGSLFNAIQGFI-EEGD 498
S+ QY GHL L + ++ + FY K P + E VV + SLF+A+ + E G+
Sbjct: 106 SLLQYPDWRGHLFLREEVA-KFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLCEAGE 164
Query: 499 EVIVMVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELA----SKFNS 666
+++ P+Y + + G + V G T++ E+ S
Sbjct: 165 ALLIPTPYYGAITQHIYLYGNVRLAYVYLDSKVTGLNTRPFQLTVEKLEMVLQGVSSEGV 224
Query: 667 KTKAIILNTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFK----I 834
K K +IL P NPLG V++ EELQ ++H I DEVY V+ ++ +
Sbjct: 225 KVKGLILINPQNPLGDVYSPEELQDFLRFAMRHKLHVIMDEVYMLSVFEESLGYRSVLSL 284
Query: 835 ATFPGMWERTITIGSAGKTFSVTGWKLG 918
P +RT + + K F ++G + G
Sbjct: 285 ERLPDP-QRTHVMWATSKDFGMSGLRFG 311
>ref|NP_035964.1| kynurenine/alpha-aminoadipate aminotransferase, mitochondrial [Mus
musculus].
Length = 425
Score = 49.7 bits (117), Expect = 7e-06
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 26/279 (9%)
Frame = +1
Query: 229 ADPTVVNLGQGLPDIS-----PPEYVKEKLSKIAAVDSMN----QYTRGFGHLSLVKALS 381
A T+++L G P+ S + E S I D + QY+ +G L+ L
Sbjct: 29 APKTLISLAPGSPNPSMFPFKSAAFTVENGSTIRFEDDLIKRALQYSPSYGIPELLSWLK 88
Query: 382 CLYGKFYQKQINPTE----------EIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDC 531
+F K NP ++ +T G L A + I GD ++V P +
Sbjct: 89 ----QFQVKLHNPPTVNYPPNQGQMDLCITSGCQDGLCKAFEMLINPGDTILVNEPLFPG 144
Query: 532 YGPMVSMAGGTPVFVPLRSKPV--DGKRWCSSDWTLDPQELASKFNSKTKAIILNTPH-- 699
+ G + VP + +G + S W + + +K KT + P+
Sbjct: 145 TLYAMKPLGCNIINVPSDEHGIIPEGLKKILSQWKPEDSKDPTK---KTPKFLYTVPNGN 201
Query: 700 NPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGM--WERTITI 873
NP G T + + I +L K+D L I D+ Y ++ ++ TF M R I
Sbjct: 202 NPTGNSLTGDRKKEIYELARKYDFLIIEDDPYYFLQFSKPWE---PTFLSMDVDGRVIRA 258
Query: 874 GSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQ-NSIFAC 987
+ KT S +G ++G+ GPK LI+++ Q +S+ AC
Sbjct: 259 DTFSKTVS-SGLRVGFMTGPKTLIQNIVLHTQVSSVHAC 296
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 58,034,319
Number of extensions: 1501967
Number of successful extensions: 4103
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4096
Number of HSP's successfully gapped: 5
Length of query: 578
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 471
Effective length of database: 12,403,707
Effective search space: 5842145997
Effective search space used: 5842145997
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007866
(1734 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001008661.1| kynurenine--oxoglutarate transaminase 3 isof... 649 0.0
Alignment gi|NP_001008662.1| kynurenine--oxoglutarate transaminase 3 isof... 610 e-174
Alignment gi|NP_001116143.1| kynurenine--oxoglutarate transaminase 1 isof... 393 e-109
Alignment gi|NP_004050.3| kynurenine--oxoglutarate transaminase 1 isoform... 393 e-109
Alignment gi|NP_001116144.1| kynurenine--oxoglutarate transaminase 1 isof... 323 2e-88
Alignment gi|NP_000344.1| tyrosine aminotransferase [Homo sapiens]. 70 8e-12
Alignment gi|NP_001120691.1| 1-aminocyclopropane-1-carboxylate synthase-l... 59 1e-08
Alignment gi|NP_115981.1| 1-aminocyclopropane-1-carboxylate synthase-like... 59 1e-08
>ref|NP_001008661.1| kynurenine--oxoglutarate transaminase 3 isoform 1 [Homo sapiens].
Length = 454
Score = 649 bits (1673), Expect = 0.0
Identities = 314/377 (83%), Positives = 343/377 (90%), Gaps = 2/377 (0%)
Frame = +1
Query: 55 MFLAQRSLCNLG--SKVLRTVSASKILGLSTSTEMSSKFKNAKRIEGLDSNVWVEFTQLA 228
MFLAQRSLC+L +K L+T+S+SKILG STS +MS KF NAKRIEGLDSNVW+EFT+LA
Sbjct: 1 MFLAQRSLCSLSGRAKFLKTISSSKILGFSTSAKMSLKFTNAKRIEGLDSNVWIEFTKLA 60
Query: 229 ADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFYQK 408
ADP+VVNLGQG PDISPP YVKE+LSKIAA+DS+NQYTRGFGH SLVKALS LY K YQK
Sbjct: 61 ADPSVVNLGQGFPDISPPTYVKEELSKIAAIDSLNQYTRGFGHPSLVKALSYLYEKLYQK 120
Query: 409 QINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFVPLRS 588
QI+ +EI+VTVGAYGSLFN IQ I+EGDEVI++VPFYDCY PMV MAG TPVF+PLRS
Sbjct: 121 QIDSNKEILVTVGAYGSLFNTIQALIDEGDEVILIVPFYDCYEPMVRMAGATPVFIPLRS 180
Query: 589 KPVDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLCIKHD 768
KPV GKRW SSDWTLDPQEL SKFNSKTKAIILNTPHNPLGKV+ REELQVIADLCIK+D
Sbjct: 181 KPVYGKRWSSSDWTLDPQELESKFNSKTKAIILNTPHNPLGKVYNREELQVIADLCIKYD 240
Query: 769 TLCISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPKHLIK 948
TLCISDEVYEW+VY+G KH KIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGP HLIK
Sbjct: 241 TLCISDEVYEWLVYSGNKHLKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPNHLIK 300
Query: 949 HLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGKRDRMVRLLDSA 1128
HLQTV QN+I+ CATPLQEALAQA W+DIKRMD+PECYFNSLPKELE KRDRMVRLL+S
Sbjct: 301 HLQTVQQNTIYTCATPLQEALAQAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLESV 360
Query: 1129 GLRPIVPDGGYFIIADV 1179
GL+PIVPDGGYFIIADV
Sbjct: 361 GLKPIVPDGGYFIIADV 377
>ref|NP_001008662.1| kynurenine--oxoglutarate transaminase 3 isoform 2 [Homo sapiens].
Length = 420
Score = 610 bits (1574), Expect = e-174
Identities = 292/343 (85%), Positives = 315/343 (91%)
Frame = +1
Query: 151 MSSKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM 330
MS KF NAKRIEGLDSNVW+EFT+LAADP+VVNLGQG PDISPP YVKE+LSKIAA+DS+
Sbjct: 1 MSLKFTNAKRIEGLDSNVWIEFTKLAADPSVVNLGQGFPDISPPTYVKEELSKIAAIDSL 60
Query: 331 NQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIV 510
NQYTRGFGH SLVKALS LY K YQKQI+ +EI+VTVGAYGSLFN IQ I+EGDEVI+
Sbjct: 61 NQYTRGFGHPSLVKALSYLYEKLYQKQIDSNKEILVTVGAYGSLFNTIQALIDEGDEVIL 120
Query: 511 MVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELASKFNSKTKAIILN 690
+VPFYDCY PMV MAG TPVF+PLRSKPV GKRW SSDWTLDPQEL SKFNSKTKAIILN
Sbjct: 121 IVPFYDCYEPMVRMAGATPVFIPLRSKPVYGKRWSSSDWTLDPQELESKFNSKTKAIILN 180
Query: 691 TPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTIT 870
TPHNPLGKV+ REELQVIADLCIK+DTLCISDEVYEW+VY+G KH KIATFPGMWERTIT
Sbjct: 181 TPHNPLGKVYNREELQVIADLCIKYDTLCISDEVYEWLVYSGNKHLKIATFPGMWERTIT 240
Query: 871 IGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDE 1050
IGSAGKTFSVTGWKLGWSIGP HLIKHLQTV QN+I+ CATPLQEALAQA W+DIKRMD+
Sbjct: 241 IGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAFWIDIKRMDD 300
Query: 1051 PECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
PECYFNSLPKELE KRDRMVRLL+S GL+PIVPDGGYFIIADV
Sbjct: 301 PECYFNSLPKELEVKRDRMVRLLESVGLKPIVPDGGYFIIADV 343
>ref|NP_001116143.1| kynurenine--oxoglutarate transaminase 1 isoform a [Homo sapiens].
Length = 422
Score = 393 bits (1010), Expect = e-109
Identities = 180/343 (52%), Positives = 248/343 (72%), Gaps = 2/343 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM-N 333
+K A+R++G+D N WVEF +LA++ VVNLGQG PD PP++ E + D M N
Sbjct: 2 AKQLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLN 61
Query: 334 QYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVM 513
QYT+ FG+ L K L+ +G+ ++I+P ++VTVG YG+LF A Q ++EGDEVI++
Sbjct: 62 QYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIII 121
Query: 514 VPFYDCYGPMVSMAGGTPVFVPLRSKPV-DGKRWCSSDWTLDPQELASKFNSKTKAIILN 690
PF+DCY PM MAGG PVFV L+ P+ +G+ SS+W LDP ELA KF S+TKA++LN
Sbjct: 122 EPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN 181
Query: 691 TPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTIT 870
TP+NPLGKVF+REEL+++A LC +HD +CI+DEVY+W+VY G +H IA+ PGMWERT+T
Sbjct: 182 TPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLT 241
Query: 871 IGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDE 1050
IGSAGKTFS TGWK+GW +GP H++KHL+TV+QNS+F C T Q A+A++ + +
Sbjct: 242 IGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQ 301
Query: 1051 PECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF P+ ++ RD M+R L S GL+PI+P G YF+I D+
Sbjct: 302 PSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDI 344
>ref|NP_004050.3| kynurenine--oxoglutarate transaminase 1 isoform a [Homo sapiens].
Length = 422
Score = 393 bits (1010), Expect = e-109
Identities = 180/343 (52%), Positives = 248/343 (72%), Gaps = 2/343 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM-N 333
+K A+R++G+D N WVEF +LA++ VVNLGQG PD PP++ E + D M N
Sbjct: 2 AKQLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLN 61
Query: 334 QYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVM 513
QYT+ FG+ L K L+ +G+ ++I+P ++VTVG YG+LF A Q ++EGDEVI++
Sbjct: 62 QYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIII 121
Query: 514 VPFYDCYGPMVSMAGGTPVFVPLRSKPV-DGKRWCSSDWTLDPQELASKFNSKTKAIILN 690
PF+DCY PM MAGG PVFV L+ P+ +G+ SS+W LDP ELA KF S+TKA++LN
Sbjct: 122 EPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN 181
Query: 691 TPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTIT 870
TP+NPLGKVF+REEL+++A LC +HD +CI+DEVY+W+VY G +H IA+ PGMWERT+T
Sbjct: 182 TPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLT 241
Query: 871 IGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDE 1050
IGSAGKTFS TGWK+GW +GP H++KHL+TV+QNS+F C T Q A+A++ + +
Sbjct: 242 IGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQ 301
Query: 1051 PECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF P+ ++ RD M+R L S GL+PI+P G YF+I D+
Sbjct: 302 PSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDI 344
>ref|NP_001116144.1| kynurenine--oxoglutarate transaminase 1 isoform b [Homo sapiens].
Length = 372
Score = 323 bits (829), Expect = 2e-88
Identities = 159/343 (46%), Positives = 215/343 (62%), Gaps = 2/343 (0%)
Frame = +1
Query: 157 SKFKNAKRIEGLDSNVWVEFTQLAADPTVVNLGQGLPDISPPEYVKEKLSKIAAVDSM-N 333
+K A+R++G+D N WVEF +LA++ VVNLGQG PD PP++ E + D M N
Sbjct: 2 AKQLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLN 61
Query: 334 QYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFIEEGDEVIVM 513
QYT+ F VI++
Sbjct: 62 QYTKTF--------------------------------------------------VIII 71
Query: 514 VPFYDCYGPMVSMAGGTPVFVPLRSKPV-DGKRWCSSDWTLDPQELASKFNSKTKAIILN 690
PF+DCY PM MAGG PVFV L+ P+ +G+ SS+W LDP ELA KF S+TKA++LN
Sbjct: 72 EPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN 131
Query: 691 TPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTIT 870
TP+NPLGKVF+REEL+++A LC +HD +CI+DEVY+W+VY G +H IA+ PGMWERT+T
Sbjct: 132 TPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLT 191
Query: 871 IGSAGKTFSVTGWKLGWSIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDE 1050
IGSAGKTFS TGWK+GW +GP H++KHL+TV+QNS+F C T Q A+A++ + +
Sbjct: 192 IGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQ 251
Query: 1051 PECYFNSLPKELEGKRDRMVRLLDSAGLRPIVPDGGYFIIADV 1179
P YF P+ ++ RD M+R L S GL+PI+P G YF+I D+
Sbjct: 252 PSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDI 294
>ref|NP_000344.1| tyrosine aminotransferase [Homo sapiens].
Length = 454
Score = 69.7 bits (169), Expect = 8e-12
Identities = 76/329 (23%), Positives = 134/329 (40%), Gaps = 15/329 (4%)
Frame = +1
Query: 238 TVVNLGQGLPDI-----SPPEYVKEKLSKIAAVDSMNQYTRGFGHLSLVKALSCLYGKFY 402
T+++L G P + + PE V + + N Y G LS + ++ +Y
Sbjct: 72 TMISLSIGDPTVFGNLPTDPE-VTQAMKDALDSGKYNGYAPSIGFLSSREEIA----SYY 126
Query: 403 QKQINPTE--EIVVTVGAYGSLFNAIQGFIEEGDEVIVMVPFYDCYGPMVSMAGGTPVFV 576
P E ++++T G ++ + G ++V P + Y + G
Sbjct: 127 HCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLY 186
Query: 577 PLRSKPVDGKRWCSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVFTREELQVIADLC 756
L + W +D ++L + KT +I+N P NP G VF++ LQ I +
Sbjct: 187 NLLPE---------KSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVA 237
Query: 757 IKHDTLCISDEVYEWIVYTGKKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGW----- 921
+ ++DE+Y +V++ K+ +AT ++ G K + V GW+LGW
Sbjct: 238 ARQCVPILADEIYGDMVFSDCKYEPLATL-STDVPILSCGGLAKRWLVPGWRLGWILIHD 296
Query: 922 --SIGPKHLIKHLQTVNQNSIFACATPLQEALAQALWVDIKRMDEPECYFNSLPKELEGK 1095
I + L ++Q + C T +Q AL L E Y N+L L+
Sbjct: 297 RRDIFGNEIRDGLVKLSQRILGPC-TIVQGALKSILC-----RTPGEFYHNTL-SFLKSN 349
Query: 1096 RDRMVRLLDS-AGLRPIVPDGGYFIIADV 1179
D L + GLRP+ P G +++ +
Sbjct: 350 ADLCYGALAAIPGLRPVRPSGAMYLMVGI 378
>ref|NP_001120691.1| 1-aminocyclopropane-1-carboxylate synthase-like protein 1 [Homo
sapiens].
Length = 501
Score = 59.3 bits (142), Expect = 1e-08
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 9/207 (4%)
Frame = +1
Query: 325 SMNQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFI-EEGDE 501
S+ QY GHL L + ++ + + + E VV + SLF+A+ + E G+
Sbjct: 128 SLLQYADWRGHLFLREEVAKFLSFYCKSPVPLRPENVVVLNGGASLFSALATVLCEAGEA 187
Query: 502 VIVMVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELASKF----NSK 669
++ P+Y V + G + V G T++ E+A + K
Sbjct: 188 FLIPTPYYGAITQHVCLYGNIRLAYVYLDSEVTGLDTRPFQLTVEKLEMALREAHSEGVK 247
Query: 670 TKAIILNTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFK----IA 837
K +IL +P NPLG V++ EELQ +H I DEVY V+ ++ +
Sbjct: 248 VKGLILISPQNPLGDVYSPEELQEYLVFAKRHRLHVIVDEVYMLSVFEKSVGYRSVLSLE 307
Query: 838 TFPGMWERTITIGSAGKTFSVTGWKLG 918
P +RT + + K F ++G + G
Sbjct: 308 RLPDP-QRTHVMWATSKDFGMSGLRFG 333
>ref|NP_115981.1| 1-aminocyclopropane-1-carboxylate synthase-like protein 1 [Homo
sapiens].
Length = 501
Score = 59.3 bits (142), Expect = 1e-08
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 9/207 (4%)
Frame = +1
Query: 325 SMNQYTRGFGHLSLVKALSCLYGKFYQKQINPTEEIVVTVGAYGSLFNAIQGFI-EEGDE 501
S+ QY GHL L + ++ + + + E VV + SLF+A+ + E G+
Sbjct: 128 SLLQYADWRGHLFLREEVAKFLSFYCKSPVPLRPENVVVLNGGASLFSALATVLCEAGEA 187
Query: 502 VIVMVPFYDCYGPMVSMAGGTPVFVPLRSKPVDGKRWCSSDWTLDPQELASKF----NSK 669
++ P+Y V + G + V G T++ E+A + K
Sbjct: 188 FLIPTPYYGAITQHVCLYGNIRLAYVYLDSEVTGLDTRPFQLTVEKLEMALREAHSEGVK 247
Query: 670 TKAIILNTPHNPLGKVFTREELQVIADLCIKHDTLCISDEVYEWIVYTGKKHFK----IA 837
K +IL +P NPLG V++ EELQ +H I DEVY V+ ++ +
Sbjct: 248 VKGLILISPQNPLGDVYSPEELQEYLVFAKRHRLHVIVDEVYMLSVFEKSVGYRSVLSLE 307
Query: 838 TFPGMWERTITIGSAGKTFSVTGWKLG 918
P +RT + + K F ++G + G
Sbjct: 308 RLPDP-QRTHVMWATSKDFGMSGLRFG 333
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 68,019,051
Number of extensions: 1763399
Number of successful extensions: 4814
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 4797
Number of HSP's successfully gapped: 9
Length of query: 578
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 470
Effective length of database: 14,737,052
Effective search space: 6926414440
Effective search space used: 6926414440
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007866
(1734 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr04 1425 0.0
>Sscrofa_Chr04
|| Length = 143465943
Score = 1425 bits (719), Expect = 0.0
Identities = 729/733 (99%)
Strand = Plus / Plus
Query: 1000 caggaggccttggctcaagcactgtgggtcgacatcaagcgcatggacgagccggagtgt 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139720474 caggaggccttggctcaagcactgtgggtcgacatcaagcgcatggacgagccggagtgt 139720533
Query: 1060 tactttaattctttgccgaaggagttggagggcaaaagggaccggatggtacggttgctt 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139720534 tactttaattctttgccgaaggagttggagggcaaaagggaccggatggtacggttgctt 139720593
Query: 1120 gacagtgccggcctgagacccatagttcctgacgggggctacttcatcatcgccgacgtg 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139720594 gacagtgccggcctgagacccatagttcctgacgggggctacttcatcatcgccgacgtg 139720653
Query: 1180 tctctgctaggtttgtaaaggtcttcattactgcgtctctgtggaaacccagctggaatt 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139720654 tctctgctaggtttgtaaaggtcttcattactgcgtctctgtggaaacccagctggaatt 139720713
Query: 1240 atatcagaatgatgaagaaaagatgggcatcaaagccatatctcatgttagacgtggaag 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139720714 atatcagaatgatgaagaaaagatgggcatcaaagccatatctcatgttagacgtggaag 139720773
Query: 1300 tgggttcccgcagtgtcctgtaatctccttgacagttcagtccttgaccctgaatgtggt 1359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 139720774 tgggttcccgcagtgtcctgtaatctccttgacagttcagtccttgaccttgaatgtggt 139720833
Query: 1360 ggttgttacgcagtgatggttttctgcttaacacagactctgcggtcatctcgttctggt 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139720834 ggttgttacgcagtgatggttttctgcttaacacagactctgcggtcatctcgttctggt 139720893
Query: 1420 gtgtaatttaaaacacaggcacatgaaatactgtatcttcctgtgtcccttttagtaaaa 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139720894 gtgtaatttaaaacacaggcacatgaaatactgtatcttcctgtgtcccttttagtaaaa 139720953
Query: 1480 ctttagtttcctttttacttaaataagattttgggagcatcagtgctcttggggaatgct 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139720954 ctttagtttcctttttacttaaataagattttgggagcatcagtgctcttggggaatgct 139721013
Query: 1540 tgccactttggagggtacgggcaccatgtcaagaangaaagtcatgtttacggaaggtct 1599
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 139721014 tgccactttggagggtacgggcaccatgtcaagaaggaaagtcatgtttacggaaggtct 139721073
Query: 1600 acatgccaagcactttncagcacccttttgacaaaagcagtgttcgttccaattttaaag 1659
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139721074 acatgccaagcactttcaagcacccttttgacaaaagcagtgttcgttccaattttaaag 139721133
Query: 1660 gcatgaagccttagaaaatgtgaaataacgtgcctgaagtcacatagctcgactccaaaa 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139721134 gcatgaagccttagaaaatgtgaaataacgtgcctgaagtcacatagctcgactccaaaa 139721193
Query: 1720 agcagtggtcttt 1732
|||||||||||||
Sbjct: 139721194 agcagtggtcttt 139721206
Score = 301 bits (152), Expect = 7e-79
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 352 ggtcatctatcacttgtgaaagctctgtcctgcctgtatggaaagttttatcaaaagcag 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139702171 ggtcatctatcacttgtgaaagctctgtcctgcctgtatggaaagttttatcaaaagcag 139702230
Query: 412 atcaatcccactgaagaaatcgttgtgacagtgggagcgtatggatccctttttaatgcc 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139702231 atcaatcccactgaagaaatcgttgtgacagtgggagcgtatggatccctttttaatgcc 139702290
Query: 472 attcaaggattcatcgaggagggagacgaagt 503
||||||||||||||||||||||||||||||||
Sbjct: 139702291 attcaaggattcatcgaggagggagacgaagt 139702322
Score = 258 bits (130), Expect = 9e-66
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 588 gaaacctgtcgatgggaaaagatggtgcagttctgactggacgttagatcctcaagaact 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139708926 gaaacctgtcgatgggaaaagatggtgcagttctgactggacgttagatcctcaagaact 139708985
Query: 648 ggcgagcaaatttaattccaaaaccaaagctataatactgaatacgcctcataaccctct 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139708986 ggcgagcaaatttaattccaaaaccaaagctataatactgaatacgcctcataaccctct 139709045
Query: 708 tggcaaggtg 717
||||||||||
Sbjct: 139709046 tggcaaggtg 139709055
Score = 250 bits (126), Expect = 2e-63
Identities = 140/147 (95%)
Strand = Plus / Plus
Query: 206 gggtcgaattcacccagttggctgcagaccccaccgttgtcaatcttggccaaggcctcc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139699070 gggtcgaattcacccagttggctgcagaccccaccgttgtcaatcttggccaaggcctcc 139699129
Query: 266 cagacatttnnnnnnntgagtacgtcaaggagaagctgtcgaagatcgcagccgttgaca 325
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139699130 cagacatttccccccctgagtacgtcaaggagaagctgtcgaagatcgcagccgttgaca 139699189
Query: 326 gtatgaatcagtacacacggggctttg 352
|||||||||||||||||||||||||||
Sbjct: 139699190 gtatgaatcagtacacacggggctttg 139699216
Score = 244 bits (123), Expect = 1e-61
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 713 aggtgttcaccagggaggaactccaggtaatcgctgacctctgcatcaaacatgacacgc 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139709144 aggtgttcaccagggaggaactccaggtaatcgctgacctctgcatcaaacatgacacgc 139709203
Query: 773 tctgcatcagtgatgaggtctatgaatggatcgtgtacaccgggaagaagcactttaaaa 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139709204 tctgcatcagtgatgaggtctatgaatggatcgtgtacaccgggaagaagcactttaaaa 139709263
Query: 833 tag 835
|||
Sbjct: 139709264 tag 139709266
Score = 190 bits (96), Expect = 2e-45
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 53 gcatgtttttggcccagaggagtctctgcaaccttggcagtaaagtcctgagaacagttt 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139682019 gcatgtttttggcccagaggagtctctgcaaccttggcagtaaagtcctgagaacagttt 139682078
Query: 113 ctgcttcaaaaatccttggactttctacttctaccg 148
||||||||||||||||||||||||||||||||||||
Sbjct: 139682079 ctgcttcaaaaatccttggactttctacttctaccg 139682114
Score = 184 bits (93), Expect = 1e-43
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 911 agctgggctggtccattggtcctaaacacttgataaaacatttacagacagttaatcaaa 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139717423 agctgggctggtccattggtcctaaacacttgataaaacatttacagacagttaatcaaa 139717482
Query: 971 acagcatctttgcctgcgccactcccttgcagg 1003
|||||||||||||||||||||||||||||||||
Sbjct: 139717483 acagcatctttgcctgcgccactcccttgcagg 139717515
Score = 172 bits (87), Expect = 4e-40
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 502 gtcatagtgatggtgcctttctatgactgctacgggcccatggtgagcatggccggagga 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139707806 gtcatagtgatggtgcctttctatgactgctacgggcccatggtgagcatggccggagga 139707865
Query: 562 acgcccgtttttgttcccctgcgatcg 588
|||||||||||||||||||||||||||
Sbjct: 139707866 acgcccgtttttgttcccctgcgatcg 139707892
Score = 157 bits (79), Expect = 2e-35
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 834 agccacttttccgggtatgtgggaaagaacgataaccataggaagtgctgggaagacttt 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139715850 agccacttttccgggtatgtgggaaagaacgataaccataggaagtgctgggaagacttt 139715909
Query: 894 cagtgtaactggctggaag 912
|||||||||||||||||||
Sbjct: 139715910 cagtgtaactggctggaag 139715928
Score = 119 bits (60), Expect = 5e-24
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 148 gaaatgtcttcgaaattcaaaaatgcaaaacgaattgaaggccttgacagcaatgtatgg 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139698134 gaaatgtcttcgaaattcaaaaatgcaaaacgaattgaaggccttgacagcaatgtatgg 139698193
Score = 105 bits (53), Expect = 8e-20
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 1 acttgggccacggaaagcgaggtgttcgcggaagggatgtgagtggcgcgtcg 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139676661 acttgggccacggaaagcgaggtgttcgcggaagggatgtgagtggcgcgtcg 139676713
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 49,147,319
Number of extensions: 272
Number of successful extensions: 272
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 271
Number of HSP's successfully gapped: 11
Length of query: 1734
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1712
Effective length of database: 2,808,408,574
Effective search space: 4807995478688
Effective search space used: 4807995478688
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)