Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007879
(1844 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001020516.2| DNA replication licensing factor MCM7 [Bos t... 1175 0.0
Alignment gi|NP_001068626.1| DNA replication licensing factor MCM4 [Bos t... 318 8e-87
Alignment gi|NP_001013604.2| DNA replication licensing factor MCM3 [Bos t... 305 9e-83
Alignment gi|NP_001039699.1| DNA replication licensing factor MCM6 [Bos t... 296 4e-80
Alignment gi|NP_001068758.1| DNA replication licensing factor MCM5 [Bos t... 291 1e-78
Alignment gi|XP_002707828.1| PREDICTED: KIAA0030-like [Bos taurus]. 273 4e-73
Alignment gi|XP_869445.4| PREDICTED: minichromosome maintenance complex c... 272 8e-73
Alignment gi|XP_002690126.1| PREDICTED: DNA replication licensing factor ... 263 5e-70
Alignment gi|XP_001789594.1| PREDICTED: minichromosome maintenance comple... 263 5e-70
Alignment gi|XP_002692413.1| PREDICTED: minichromosome maintenance comple... 248 1e-65
>ref|NP_001020516.2| DNA replication licensing factor MCM7 [Bos taurus].
Length = 719
Score = 1175 bits (3039), Expect = 0.0
Identities = 595/614 (96%), Positives = 601/614 (97%)
Frame = +3
Query: 3 AHREQVAMYIDLDDVTEDDPELVDSICENTKRYARPFADAVQELLPQYKEREVVNKDVLD 182
AHREQVAMY+DLDD+ EDDPELVDSICENTKRYAR FADAVQELLPQYKEREVVNKDVLD
Sbjct: 41 AHREQVAMYVDLDDIAEDDPELVDSICENTKRYARLFADAVQELLPQYKEREVVNKDVLD 100
Query: 183 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKL 362
VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSS+KPRVIREVRADSVGKL
Sbjct: 101 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSNKPRVIREVRADSVGKL 160
Query: 363 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 542
VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL
Sbjct: 161 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 220
Query: 543 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 722
YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI
Sbjct: 221 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 280
Query: 723 LRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQIAEEDFYEKLAASI 902
LRTGFRQ+VQGLLSETYLEAHRIVKMSKSE+DESGAGEL+REELRQI EEDFYEKLAASI
Sbjct: 281 LRTGFRQMVQGLLSETYLEAHRIVKMSKSEEDESGAGELTREELRQITEEDFYEKLAASI 340
Query: 903 APEIYGHEDVKKAXXXXXXXXXDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR 1082
APEIYGHEDVKKA DQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR
Sbjct: 341 APEIYGHEDVKKALLLLLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR 400
Query: 1083 SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE 1262
SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE
Sbjct: 401 SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE 460
Query: 1263 VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL 1442
VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL
Sbjct: 461 VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL 520
Query: 1443 IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPESLADY 1622
IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQP VPESLADY
Sbjct: 521 IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPAVPESLADY 580
Query: 1623 ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS 1802
ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS
Sbjct: 581 ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS 640
Query: 1803 KDSLLGDKGQTART 1844
KDSLLGDKGQTART
Sbjct: 641 KDSLLGDKGQTART 654
>ref|NP_001068626.1| DNA replication licensing factor MCM4 [Bos taurus].
Length = 836
Score = 318 bits (816), Expect = 8e-87
Identities = 198/529 (37%), Positives = 301/529 (56%), Gaps = 16/529 (3%)
Frame = +3
Query: 252 NQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYT 431
++YP ++ ++ + ++ K + +R + + + +L+ + G+V R S++ P M A +
Sbjct: 220 DRYPDSILEH-QIQVRPFNALKTKNMRNLNPEDIDQLIAISGMVIRTSQLIPEMQEAFFQ 278
Query: 432 CDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQ 611
C C I +C + C T+ S ++ + S F Q +K+QE +
Sbjct: 279 CQVCAHTARVEIDRGRIAEPCVC--ERCHTSHSMALIHNR---SVFSDKQMIKLQESPED 333
Query: 612 VPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI-LRTGFRQVVQGLLSETYLEAHR 788
+P G P ++ + + QPGD V VTGI+ + +R R + +T+++
Sbjct: 334 MPAGQTPHTVVLFAHNDLVDKVQPGDRVHVTGIYRAVPIRINPRVSNVKSVYKTHID--- 390
Query: 789 IVKMSKSED------DESGAGELSREELRQIAEE-----DFYEKLAASIAPEIYGHEDVK 935
++ K++ DE +L E+ ++ +E D YE+LA+++AP IY HED+K
Sbjct: 391 VIHYRKTDSKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYERLASALAPSIYEHEDIK 450
Query: 936 KAXXXXXXXXX--DQSPRGM-KIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRG 1106
K D S G K R INI L GDPG +KSQLL Y+ L PR QYT+G+G
Sbjct: 451 KGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVHNLVPRGQYTSGKG 510
Query: 1107 SSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTIS 1286
SS VGLTA V++D + +L L+ GALVL+D GVCCIDEFDKM E+ R+ +HEVMEQQT+S
Sbjct: 511 SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGVCCIDEFDKMNESTRSVLHEVMEQQTLS 570
Query: 1287 IAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRD 1466
IAKAGI+ LNAR SILAAANP ++NP+++ +NIQLP LLSRFDL++L+ D D
Sbjct: 571 IAKAGIICQLNARTSILAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA 630
Query: 1467 NDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVE 1643
D RLA H+ ++ S + AQ E +DM ++R YIA P + + + + AYV+
Sbjct: 631 YDRRLAHHLVSLYYQSEE-EAQEEGMDMAVLRDYIAYAHSTVMPRLSQDASQALIEAYVD 689
Query: 1644 MRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRL 1790
MR+ +S+ R L +++RL+ A A++R + VE DV EA RL
Sbjct: 690 MRK-VGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRL 737
>ref|NP_001013604.2| DNA replication licensing factor MCM3 [Bos taurus].
Length = 808
Score = 305 bits (781), Expect = 9e-83
Identities = 205/560 (36%), Positives = 300/560 (53%), Gaps = 55/560 (9%)
Frame = +3
Query: 282 FELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQ 461
F + +G SK R + + + +V V GIVT+ S V+P++V + + C +
Sbjct: 98 FYIGLEGSFGSKHVSPRTLTSCFLSCVVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIER 157
Query: 462 PIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRG--SKFIKFQEMKMQEHSDQVPVGNIPR 635
T L+ PS + L+T S + Q + +QE ++ P G +PR
Sbjct: 158 RYSDLT--SLVAFPSSSVYPTKDEENNPLETEYGLSVYKDHQIITIQEMPEKAPAGQLPR 215
Query: 636 SITVLVEGENTRIAQPGDHVSVTGIF--LPILRTGFRQVVQGLLSETYLEAHRIVKMSKS 809
S+ V+++ + +PGD V V G + LP + G+ T L A + +MSK
Sbjct: 216 SVDVILDDDLVDRVKPGDRVQVVGTYRCLPGKKGGYTSGT----FRTVLIACNVKQMSKD 271
Query: 810 EDDESGAGELSR-EELRQIAEEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PR 983
A ++++ ++ + +D +++LA S+AP I+GH+ VKKA ++
Sbjct: 272 VQPSFSAEDIAKIKKFSKTRSKDIFDQLARSLAPSIHGHDYVKKAILCLLLGGVERDLEN 331
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
G IRG+INI L+GDP VAKSQLL Y+ APR+ TTGRGSSGVGLTAAV D +GE
Sbjct: 332 GSHIRGDINILLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGER 391
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GA+VLAD+GV CIDEFDKM++ DRTAIHEVMEQ ++IAKAGI LNARCS+LAA
Sbjct: 392 RLEAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAA 451
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQP 1523
ANP YGRY+ ++ +NI L +LLSRFDLL+++ D+ D + D ++ H+ +H++ R P
Sbjct: 452 ANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHRY-RAP 510
Query: 1524 PAQ--------------------FEPLDMK--------------------------LMRR 1565
Q F P D + MR+
Sbjct: 511 GEQDGDAMPLGSAVDILATDDPNFSPDDQQDTQIYEKHDNLLHGIKKKKEKMVSAAFMRK 570
Query: 1566 YIAMCREKQPTVPESLADYITAAYVEMRREAWASKDATYTS---ARTLLAILRLSTALAR 1736
YI + + +P + + A YI Y +R + S D TS ARTL ++RL+TA A+
Sbjct: 571 YIHVAKIIKPVLTQESAAYIAEEYSRLRSQDSMSSDTARTSPVTARTLETLIRLATAHAK 630
Query: 1737 LRMVDTVEKEDVNEAIRLME 1796
RM TV+ +D EA+ L++
Sbjct: 631 ARMSKTVDLQDAEEAVELVQ 650
>ref|NP_001039699.1| DNA replication licensing factor MCM6 [Bos taurus].
Length = 821
Score = 296 bits (758), Expect = 4e-80
Identities = 191/558 (34%), Positives = 295/558 (52%), Gaps = 47/558 (8%)
Frame = +3
Query: 270 LMRRFELYFQG-PSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCG 446
L + F + FQ P+ K IRE+ + +G L + G V R V P +V T+ C C
Sbjct: 106 LAKDFYVAFQDLPTRHK---IRELTSSRIGLLTRISGQVVRTHPVHPELVSGTFLCLDCQ 162
Query: 447 AETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGN 626
Q + +C + C R R L T S+F+ FQ++++QE ++P G+
Sbjct: 163 TVIKDVEQQFKYTQPNICRNPVCANRR---RFLLDTNKSRFVDFQKVRIQETQAELPRGS 219
Query: 627 IPRSITVLVEGENTRIAQPGDHVSVTGIFLPI------------LRTGFR---------Q 743
IPRS+ V++ E AQ GD TG + + T R +
Sbjct: 220 IPRSLEVILRAEAVESAQAGDKCDFTGTLIVVPDVSKLSTPGARAETDSRVSGVDGYETE 279
Query: 744 VVQGLLSETYLE-AHRIVKMS-----------------KSEDDESGAGELSREELRQIAE 869
V+GL + + ++R+V ++ + + ES +++ +E ++ E
Sbjct: 280 GVRGLRALGVRDLSYRLVFLACCVAPTNPRFGGKELRDEEQTAESIKNQMTVKEWEKVFE 339
Query: 870 ----EDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSP-RGMKIRGNINICLMGDPG 1034
++ Y L S+ P I+G+++VK+ ++ G +RG+IN+C++GDP
Sbjct: 340 MSQDKNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGDPS 399
Query: 1035 VAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCI 1214
AKSQ L +++ +PR+ YT+G+ S GLTAAV+RD S E +E GAL+LAD GVCCI
Sbjct: 400 TAKSQFLKHVEEFSPRAVYTSGKASIAAGLTAAVVRDEESHEFVIEAGALMLADNGVCCI 459
Query: 1215 DEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQN 1394
DEFDKM D+ AIHE MEQQTISI KAG+ TLNAR SILAAANP G Y+ +SL+QN
Sbjct: 460 DEFDKMDVRDQVAIHEAMEQQTISITKAGVKATLNARTSILAAANPISGHYDRSKSLKQN 519
Query: 1395 IQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIA 1574
I L A ++SRFDL +++ D + D +A+ I V HSR + + +RRY+
Sbjct: 520 INLSAPIMSRFDLFFILVDECNEVTDYAIARRI--VDLHSRIEDSIDRVYSLDEIRRYLL 577
Query: 1575 MCREKQPTVPESLADYITAAYVEMRRE--AWASKDATYTSARTLLAILRLSTALARLRMV 1748
R+ +P + + D+I Y +R+ + +K + + R L +++RLS A+AR+
Sbjct: 578 FARQFKPKISKESEDFIVEQYKRLRQRDGSGVTKSSWRITVRQLESMIRLSEAMARMHCC 637
Query: 1749 DTVEKEDVNEAIRLMEMS 1802
D V+ + V EA RL+ S
Sbjct: 638 DEVQPKHVKEAFRLLNKS 655
>ref|NP_001068758.1| DNA replication licensing factor MCM5 [Bos taurus].
Length = 734
Score = 291 bits (746), Expect = 1e-78
Identities = 193/564 (34%), Positives = 312/564 (55%), Gaps = 27/564 (4%)
Frame = +3
Query: 192 EHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKLVTV 371
EH ++E+ +++ + E+++ ++ + S + P IR +++D++ LV +
Sbjct: 94 EHLQLLEEAAKEVADEVTRPRPAGDEVLQDIQVMLK--SDASPSSIRSLKSDTMSHLVKI 151
Query: 372 RGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSG------ 533
GIV S V+ + + C C + P + ++C T+++G
Sbjct: 152 PGIVIAASGVRAKATRISIQCRSCHSTLTNIAMRPGLDGYAL--PRKCNTDQAGRPKCPL 209
Query: 534 GRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIF 713
++ K + FQ +K+QE D VP G +PR + + + PG+ V++ GI+
Sbjct: 210 DPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYCDRYLCDKVVPGNRVTIMGIY 269
Query: 714 LPILRTGF-----RQVVQGLLSETYLEAHRIVKMSKSEDDESG---AGELS---REELRQ 860
I + G R V + Y+ I + + D SG AG ++ EE R+
Sbjct: 270 -SIKKFGLTSNRGRDRVGVGIRSAYIRVLGI----QVDTDGSGRTFAGAMTPQEEEEFRR 324
Query: 861 IAE-EDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PRGMKIRGNINICLMGDPG 1034
+A + YE ++ SIAP I+G D+KKA + P G+ RG+IN+ ++GDPG
Sbjct: 325 LAALPNIYELISKSIAPSIFGGTDMKKAIACLLFGGSRKRLPDGLTRRGDINLLMLGDPG 384
Query: 1035 VAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCI 1214
AKSQLL ++++ +P YT+G+GSS GLTA+V+RD S +EGGA+VLAD GV CI
Sbjct: 385 TAKSQLLKFVEKCSPIGVYTSGKGSSAAGLTASVMRDPSSRNFIMEGGAMVLADGGVVCI 444
Query: 1215 DEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQN 1394
DEFDKM E DR AIHE MEQQTISIAKAGI TTLN+RCS+LAAAN +GR++ + E N
Sbjct: 445 DEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDETKG-EDN 503
Query: 1395 IQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHS-RQPPAQFEPLDMKLMRRYI 1571
I +LSRFD++++++D + + D+ LA+H+ +H + Q A +D+ ++++I
Sbjct: 504 IDFMPTILSRFDMIFIVKDEHNEERDVMLAKHVITLHVSALTQAQAVEGEIDLAKLKKFI 563
Query: 1572 AMCREK-QPTVPESLADYITAAYVEMRREA-WASKDATYTSA-----RTLLAILRLSTAL 1730
A CR K P + A+ + Y+ MR A +D+ S+ R L AI+R++ AL
Sbjct: 564 AYCRAKCGPRLSAEAAEKLKNRYIIMRSGARQHERDSDRRSSIPITVRQLEAIVRIAEAL 623
Query: 1731 ARLRMVDTVEKEDVNEAIRLMEMS 1802
+++++ + DV EA+RL ++S
Sbjct: 624 SKMKLQPFATEADVEEALRLFQVS 647
>ref|XP_002707828.1| PREDICTED: KIAA0030-like [Bos taurus].
Length = 916
Score = 273 bits (698), Expect = 4e-73
Identities = 187/537 (34%), Positives = 288/537 (53%), Gaps = 48/537 (8%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPS 506
+R +R + +L+ G+VT + V P++ + Y C++CG F+ C S
Sbjct: 294 LRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCG-----------FVLGPFCQS 342
Query: 507 QECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSD--QVPVGNIPRSITVLVEGENTRIA- 677
Q Q + G Q+ G + +E+ + S + V NI L G+ R A
Sbjct: 343 QN-QEVKPGSCPECQSAGPFEVNMEEVSASQPSRWFRCFVXNIS-IYRSLANGKIWRTAP 400
Query: 678 ---QPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLE-----------------AHRIVK 797
+P + LP +V L +T + A+ + K
Sbjct: 401 AAPEPCPQQGLGLSXLPGTCLASHRVTITLQGDTAYDGALNTANGFPVFATVILANHVAK 460
Query: 798 MSKSEDDESGAGELSREELRQIA----EEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXX 965
+D++ GEL+ E+++ I ++ EK+ ASIAP IYGHED+K+
Sbjct: 461 ----KDNKVAVGELTDEDVKMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGG 516
Query: 966 XDQSPRGM-KIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLR 1142
++P G K+RG+IN+ L GDPG AKSQ L Y+++++ R+ +TTG+G+S VGLTA V R
Sbjct: 517 EPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYVEKVSSRAIFTTGQGASAVGLTAYVQR 576
Query: 1143 DSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNA 1322
VS E TLE GALVLAD+GVC IDEFDKM + DRT+IHE MEQQ+ISI+KAGI+T+L A
Sbjct: 577 HPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQA 636
Query: 1323 RCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYV 1502
RC+++AAANP GRY+P + +N+ L ++SRFD+L +++D D D LA+ + V
Sbjct: 637 RCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDVLCVVRDTVDPVQDEMLARFV--V 694
Query: 1503 HQHSRQPPAQ-------------------FEPLDMKLMRRYIAMCREK-QPTVPESLADY 1622
H R P+ EPL +++R+YI +EK P + + D
Sbjct: 695 GSHVRHHPSNKEDGGSGGAPEPAMPNTYGVEPLPQEVLRKYIIYAKEKVHPKLNQMDQDK 754
Query: 1623 ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLM 1793
+ Y ++R+E+ A+ T R + +++R++ A AR+ + D V ++DVN AIR+M
Sbjct: 755 VAKMYSDLRKESMATGSIPIT-VRHIESMIRMAEAHARMHLRDYVMEDDVNMAIRVM 810
>ref|XP_869445.4| PREDICTED: minichromosome maintenance complex component 2 isoform 3
[Bos taurus].
Length = 857
Score = 272 bits (695), Expect = 8e-73
Identities = 180/514 (35%), Positives = 277/514 (53%), Gaps = 25/514 (4%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPS 506
+R +R + +L+ G+VT + V P++ + Y C++CG F+ C S
Sbjct: 294 LRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCG-----------FVLGPFCQS 342
Query: 507 QECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPG 686
Q Q + G Q+ G E+ M+E + N ++ NT P
Sbjct: 343 QN-QEVKPGSCPECQSAGPF-----EVNMEEELTGIYHNNYDGAL-------NTANGFP- 388
Query: 687 DHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQIA 866
+ T + A+ + K +D++ GEL+ E+++ I
Sbjct: 389 ------------------------VFATVILANHVAK----KDNKVAVGELTDEDVKMIT 420
Query: 867 ----EEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPRGM-KIRGNINICLMGDP 1031
++ EK+ ASIAP IYGHED+K+ ++P G K+RG+IN+ L GDP
Sbjct: 421 SLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDP 480
Query: 1032 GVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCC 1211
G AKSQ L Y+++++ R+ +TTG+G+S VGLTA V R VS E TLE GALVLAD+GVC
Sbjct: 481 GTAKSQFLKYVEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCL 540
Query: 1212 IDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQ 1391
IDEFDKM + DRT+IHE MEQQ+ISI+KAGI+T+L ARC+++AAANP GRY+P + +
Sbjct: 541 IDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSE 600
Query: 1392 NIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQ------------- 1532
N+ L ++SRFD+L +++D D D LA+ + V H R P+
Sbjct: 601 NVDLTEPIISRFDVLCVVRDTVDPVQDEMLARFV--VGSHVRHHPSNKEDGGSGGAPEPA 658
Query: 1533 ------FEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRREAWASKDATYTSA 1691
EPL +++R+YI +EK P + + D + Y ++R+E+ A+ T
Sbjct: 659 MPNTYGVEPLPQEVLRKYIIYAKEKVHPKLNQMDQDKVAKMYSDLRKESMATGSIPIT-V 717
Query: 1692 RTLLAILRLSTALARLRMVDTVEKEDVNEAIRLM 1793
R + +++R++ A AR+ + D V ++DVN AIR+M
Sbjct: 718 RHIESMIRMAEAHARMHLRDYVMEDDVNMAIRVM 751
>ref|XP_002690126.1| PREDICTED: DNA replication licensing factor MCM9-like [Bos taurus].
Length = 1139
Score = 263 bits (671), Expect = 5e-70
Identities = 185/520 (35%), Positives = 287/520 (55%), Gaps = 19/520 (3%)
Frame = +3
Query: 318 PRVIRE--VRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPI---QSPTF 482
P ++RE + VG ++V G V R S VK Y C++C Q TF
Sbjct: 107 PELVREHIPKTKDVGHFLSVTGTVIRTSLVKILEFERDYMCNKCKHVFVVQADFEQYYTF 166
Query: 483 MPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGE 662
CPS E + L + ++ +QE+K+QE ++ VG+IPRS+ V++E +
Sbjct: 167 FRPSSCPSLENCDSSKFTCLSDLSSPTRCRDYQEIKIQEQVQRLSVGSIPRSMQVILEDD 226
Query: 663 NTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELS 842
+ GD +++ G+ + + F+Q V+ + E L+A+ I ++E AG
Sbjct: 227 LVDSCKSGDDITIYGVVMQRWKP-FKQDVRCEV-EIVLKANYI-----QVNNEESAGVNM 279
Query: 843 REELRQIAEEDFYE-----------KLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPR-G 986
EE+R+ EDF+E ++ AS+ P+++G VK A ++ G
Sbjct: 280 DEEVRK-EFEDFWEHYKSDPFAGRNEILASLCPQVFGMYLVKLAVAMVLAGGIQRTDATG 338
Query: 987 MKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT 1166
++RG ++ L+GDPG KSQ L Y ++ PRS TTG GS+ GLT ++DS GE
Sbjct: 339 TRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTTGIGSTSAGLTVTAVKDS--GEWN 396
Query: 1167 LEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAA 1346
LE GALVLAD G+CCIDEF+ + E DRT+IHE MEQQTIS+AKAG++ LN R +ILAA
Sbjct: 397 LEAGALVLADAGLCCIDEFNSLKEHDRTSIHEAMEQQTISVAKAGLVCKLNTRTTILAAT 456
Query: 1347 NPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPP 1526
NP G+Y+PR S+ NI L + LLSRFDL+ ++ D + D D ++ +++ ++ P
Sbjct: 457 NPK-GQYDPRESVSVNIALSSPLLSRFDLILVLLDTKNEDWDRIIS---SFILENKGYPS 512
Query: 1527 AQFEPLDMKLMRRYIAMCREKQPTVPESLADYITAAYVEMRREAWASKDATYTSARTLLA 1706
+ M+ M+ Y + R+ QPT+ + + + Y +M+R++ S++A T+ R L +
Sbjct: 513 KSEKLWSMEKMKSYFCLIRKLQPTLSDE-GNQVLLRYYQMQRQS-DSRNAARTTIRLLES 570
Query: 1707 ILRLSTALARLRMVDTVEKEDVNEAIRLME--MSKDSLLG 1820
++RL+ A ARL DTV ED + +ME M +LLG
Sbjct: 571 LIRLAEAHARLMFRDTVTLEDAVTVVSVMESSMQGGALLG 610
>ref|XP_001789594.1| PREDICTED: minichromosome maintenance complex component 9 [Bos
taurus].
Length = 1139
Score = 263 bits (671), Expect = 5e-70
Identities = 185/520 (35%), Positives = 287/520 (55%), Gaps = 19/520 (3%)
Frame = +3
Query: 318 PRVIRE--VRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPI---QSPTF 482
P ++RE + VG ++V G V R S VK Y C++C Q TF
Sbjct: 107 PELVREHIPKTKDVGHFLSVTGTVIRTSLVKILEFERDYMCNKCKHVFVVQADFEQYYTF 166
Query: 483 MPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGE 662
CPS E + L + ++ +QE+K+QE ++ VG+IPRS+ V++E +
Sbjct: 167 FRPSSCPSLENCDSSKFTCLSDLSSPTRCRDYQEIKIQEQVQRLSVGSIPRSMQVILEDD 226
Query: 663 NTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELS 842
+ GD +++ G+ + + F+Q V+ + E L+A+ I ++E AG
Sbjct: 227 LVDSCKSGDDITIYGVVMQRWKP-FKQDVRCEV-EIVLKANYI-----QVNNEESAGVNM 279
Query: 843 REELRQIAEEDFYE-----------KLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPR-G 986
EE+R+ EDF+E ++ AS+ P+++G VK A ++ G
Sbjct: 280 DEEVRK-EFEDFWEHYKSDPFAGRNEILASLCPQVFGMYLVKLAVAMVLAGGIQRTDATG 338
Query: 987 MKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELT 1166
++RG ++ L+GDPG KSQ L Y ++ PRS TTG GS+ GLT ++DS GE
Sbjct: 339 TRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTTGIGSTSAGLTVTAVKDS--GEWN 396
Query: 1167 LEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAA 1346
LE GALVLAD G+CCIDEF+ + E DRT+IHE MEQQTIS+AKAG++ LN R +ILAA
Sbjct: 397 LEAGALVLADAGLCCIDEFNSLKEHDRTSIHEAMEQQTISVAKAGLVCKLNTRTTILAAT 456
Query: 1347 NPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPP 1526
NP G+Y+PR S+ NI L + LLSRFDL+ ++ D + D D ++ +++ ++ P
Sbjct: 457 NPK-GQYDPRESVSVNIALSSPLLSRFDLILVLLDTKNEDWDRIIS---SFILENKGYPS 512
Query: 1527 AQFEPLDMKLMRRYIAMCREKQPTVPESLADYITAAYVEMRREAWASKDATYTSARTLLA 1706
+ M+ M+ Y + R+ QPT+ + + + Y +M+R++ S++A T+ R L +
Sbjct: 513 KSEKLWSMEKMKSYFCLIRKLQPTLSDE-GNQVLLRYYQMQRQS-DSRNAARTTIRLLES 570
Query: 1707 ILRLSTALARLRMVDTVEKEDVNEAIRLME--MSKDSLLG 1820
++RL+ A ARL DTV ED + +ME M +LLG
Sbjct: 571 LIRLAEAHARLMFRDTVTLEDAVTVVSVMESSMQGGALLG 610
>ref|XP_002692413.1| PREDICTED: minichromosome maintenance complex component 8 isoform 1
[Bos taurus].
Length = 832
Score = 248 bits (633), Expect = 1e-65
Identities = 169/549 (30%), Positives = 276/549 (50%), Gaps = 57/549 (10%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPS 506
++ VRA+ GK + +RG V RVS KP + C CG + + CP
Sbjct: 199 LKNVRANYYGKYIALRGTVVRVSNTKPLCTKMAFLCAACGEIQSLSLPDGKYNLPTKCPV 258
Query: 507 QECQTNRSGGRLYLQTRGSKF---IKFQEMKMQE--HSDQVPVGNIPRSITVLVEGENTR 671
C+ G+ + R S + +Q +K+QE DQ G IPR+I + +
Sbjct: 259 PACR-----GKSFTALRSSPLTVTMDWQSIKIQELMSDDQREAGRIPRTIECELVHDLVD 313
Query: 672 IAQPGDHVSVTGIF-LPILRTGFRQVVQGLLSETYLEAHRIV----KMSKSEDDESGAGE 836
PGD V++TG+ + G R + Y+EA+ + + +K+ +D G
Sbjct: 314 SCVPGDTVTITGVVKVSNAEEGSRNKNDKCMFLLYIEANSVSNNKGQKTKASEDGCKHGA 373
Query: 837 LSREELRQI-------AEEDFYEKLAASIAPEIYGHEDVKK----AXXXXXXXXXDQSPR 983
L L+ + +EE+ ++ + S+ P I+GHE VK A D R
Sbjct: 374 LMEFSLKDLYAIQEIQSEENLFKLIVNSLCPVIFGHELVKAGLALALFGGSQKYADDKNR 433
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
+ IRG+ ++ ++GDPG+ KSQ+L + +APR Y G ++ GLT + +DS SG+
Sbjct: 434 -IPIRGDPHVLVVGDPGLGKSQMLQAVCSVAPRGVYVCGNTTTTSGLTVTLSKDSSSGDF 492
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GALVL DQG+C IDEFDKM A+ E MEQQ+IS+AKAG++ +L AR SI+AA
Sbjct: 493 ALEAGALVLGDQGICGIDEFDKMGN-QHQALLEAMEQQSISLAKAGMVCSLPARTSIIAA 551
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQ- 1520
ANP G YN +++ +N+++ +ALLSRFDL++++ D P+ D+D L++H+ + ++
Sbjct: 552 ANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILLDTPNEDHDHLLSEHVIAIRAGKQRA 611
Query: 1521 ----------------------------------PPAQFEPLDMKLMRRYIAMCRE-KQP 1595
P +P+ +L+R+YI R+ P
Sbjct: 612 VSSATVARMNSQDSNTSILEVVSDKPLSERLKVVPGETIDPIPHQLLRKYIGYSRQYVYP 671
Query: 1596 TVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVN 1775
+ A + Y+E+R+++ + T+ R L +++RL+ A ARL + + KED
Sbjct: 672 RLSTEAAQILQNFYLELRKQSQRLSSSPITT-RQLESLIRLTEARARLELREEATKEDAE 730
Query: 1776 EAIRLMEMS 1802
+ + +M+ S
Sbjct: 731 DIVEIMKYS 739
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 74,613,313
Number of extensions: 2242104
Number of successful extensions: 10198
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 10128
Number of HSP's successfully gapped: 15
Length of query: 614
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 506
Effective length of database: 14,107,870
Effective search space: 7138582220
Effective search space used: 7138582220
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007879
(1844 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_849809.1| PREDICTED: similar to DNA replication licensing... 1169 0.0
Alignment gi|XP_859866.1| PREDICTED: similar to DNA replication licensing... 1160 0.0
Alignment gi|XP_536865.2| PREDICTED: similar to DNA replication licensing... 1160 0.0
Alignment gi|XP_859831.1| PREDICTED: similar to DNA replication licensing... 556 e-158
Alignment gi|XP_535063.2| PREDICTED: similar to minichromosome maintenanc... 314 2e-85
Alignment gi|XP_538960.2| PREDICTED: similar to DNA replication licensing... 304 2e-82
Alignment gi|XP_541736.2| PREDICTED: similar to minichromosome maintenanc... 303 3e-82
Alignment gi|XP_533338.2| PREDICTED: similar to DNA replication licensing... 298 9e-81
Alignment gi|XP_853134.1| PREDICTED: similar to DNA replication licensing... 282 9e-76
Alignment gi|XP_541221.2| PREDICTED: similar to minichromosome maintenanc... 262 7e-70
>ref|XP_849809.1| PREDICTED: similar to DNA replication licensing factor MCM7 (CDC47
homolog) (P1.1-MCM3) isoform 3 [Canis familiaris].
Length = 719
Score = 1169 bits (3025), Expect = 0.0
Identities = 594/614 (96%), Positives = 598/614 (97%)
Frame = +3
Query: 3 AHREQVAMYIDLDDVTEDDPELVDSICENTKRYARPFADAVQELLPQYKEREVVNKDVLD 182
AHREQVAMYIDLDDV EDDPELVDSICEN +RY R FADAVQELLPQYKEREVVNKDVLD
Sbjct: 41 AHREQVAMYIDLDDVAEDDPELVDSICENARRYTRLFADAVQELLPQYKEREVVNKDVLD 100
Query: 183 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKL 362
VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSS+KPRVIREVRADSVGKL
Sbjct: 101 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSNKPRVIREVRADSVGKL 160
Query: 363 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 542
VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL
Sbjct: 161 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 220
Query: 543 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 722
YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI
Sbjct: 221 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 280
Query: 723 LRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQIAEEDFYEKLAASI 902
LRTGFRQVVQGLLSETYLEAHR+VKMSKSEDDES A ELSREELRQI EEDFYEKLAASI
Sbjct: 281 LRTGFRQVVQGLLSETYLEAHRVVKMSKSEDDESAAVELSREELRQITEEDFYEKLAASI 340
Query: 903 APEIYGHEDVKKAXXXXXXXXXDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR 1082
APEIYGHEDVKKA DQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR
Sbjct: 341 APEIYGHEDVKKALLLLLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR 400
Query: 1083 SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE 1262
SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE
Sbjct: 401 SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE 460
Query: 1263 VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL 1442
VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL
Sbjct: 461 VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL 520
Query: 1443 IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPESLADY 1622
IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYI+MCREKQPTVPESLADY
Sbjct: 521 IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYISMCREKQPTVPESLADY 580
Query: 1623 ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS 1802
ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS
Sbjct: 581 ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS 640
Query: 1803 KDSLLGDKGQTART 1844
KDSLLGDKGQTART
Sbjct: 641 KDSLLGDKGQTART 654
>ref|XP_859866.1| PREDICTED: similar to DNA replication licensing factor MCM7 (CDC47
homolog) (P1.1-MCM3) isoform 5 [Canis familiaris].
Length = 724
Score = 1160 bits (3002), Expect = 0.0
Identities = 593/619 (95%), Positives = 597/619 (96%), Gaps = 5/619 (0%)
Frame = +3
Query: 3 AHREQVAMYIDLDDVTEDDPELVDSICENTKRYARPFADAVQELLPQYKEREVVNKDVLD 182
AHREQVAMYIDLDDV EDDPELVDSICEN +RY R FADAVQELLPQYKEREVVNKDVLD
Sbjct: 41 AHREQVAMYIDLDDVAEDDPELVDSICENARRYTRLFADAVQELLPQYKEREVVNKDVLD 100
Query: 183 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKL 362
VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSS+KPRVIREVRADSVGKL
Sbjct: 101 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSNKPRVIREVRADSVGKL 160
Query: 363 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 542
VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL
Sbjct: 161 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 220
Query: 543 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 722
YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI
Sbjct: 221 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 280
Query: 723 LRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQIAEE-----DFYEK 887
LRTGFRQVVQGLLSETYLEAHR+VKMSKSEDDES A ELSREELRQI E DFYEK
Sbjct: 281 LRTGFRQVVQGLLSETYLEAHRVVKMSKSEDDESAAVELSREELRQITGESPGGEDFYEK 340
Query: 888 LAASIAPEIYGHEDVKKAXXXXXXXXXDQSPRGMKIRGNINICLMGDPGVAKSQLLSYID 1067
LAASIAPEIYGHEDVKKA DQSPRGMKIRGNINICLMGDPGVAKSQLLSYID
Sbjct: 341 LAASIAPEIYGHEDVKKALLLLLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYID 400
Query: 1068 RLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADR 1247
RLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADR
Sbjct: 401 RLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADR 460
Query: 1248 TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRF 1427
TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRF
Sbjct: 461 TAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRF 520
Query: 1428 DLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPE 1607
DLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYI+MCREKQPTVPE
Sbjct: 521 DLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYISMCREKQPTVPE 580
Query: 1608 SLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIR 1787
SLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIR
Sbjct: 581 SLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIR 640
Query: 1788 LMEMSKDSLLGDKGQTART 1844
LMEMSKDSLLGDKGQTART
Sbjct: 641 LMEMSKDSLLGDKGQTART 659
>ref|XP_536865.2| PREDICTED: similar to DNA replication licensing factor MCM7 (CDC47
homolog) (P1.1-MCM3) isoform 1 [Canis familiaris].
Length = 733
Score = 1160 bits (3000), Expect = 0.0
Identities = 594/628 (94%), Positives = 598/628 (95%), Gaps = 14/628 (2%)
Frame = +3
Query: 3 AHREQVAMYIDLDDVTEDDPELVDSICENTKRYARPFADAVQELLPQYKEREVVNKDVLD 182
AHREQVAMYIDLDDV EDDPELVDSICEN +RY R FADAVQELLPQYKEREVVNKDVLD
Sbjct: 41 AHREQVAMYIDLDDVAEDDPELVDSICENARRYTRLFADAVQELLPQYKEREVVNKDVLD 100
Query: 183 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKL 362
VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSS+KPRVIREVRADSVGKL
Sbjct: 101 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSNKPRVIREVRADSVGKL 160
Query: 363 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 542
VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL
Sbjct: 161 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 220
Query: 543 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 722
YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI
Sbjct: 221 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 280
Query: 723 LRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQIA------------ 866
LRTGFRQVVQGLLSETYLEAHR+VKMSKSEDDES A ELSREELRQI
Sbjct: 281 LRTGFRQVVQGLLSETYLEAHRVVKMSKSEDDESAAVELSREELRQITGESPGGAWEHKL 340
Query: 867 --EEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPRGMKIRGNINICLMGDPGVA 1040
EEDFYEKLAASIAPEIYGHEDVKKA DQSPRGMKIRGNINICLMGDPGVA
Sbjct: 341 LPEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPRGMKIRGNINICLMGDPGVA 400
Query: 1041 KSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDE 1220
KSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDE
Sbjct: 401 KSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDE 460
Query: 1221 FDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQ 1400
FDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQ
Sbjct: 461 FDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQ 520
Query: 1401 LPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC 1580
LPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYI+MC
Sbjct: 521 LPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYISMC 580
Query: 1581 REKQPTVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVE 1760
REKQPTVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVE
Sbjct: 581 REKQPTVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVE 640
Query: 1761 KEDVNEAIRLMEMSKDSLLGDKGQTART 1844
KEDVNEAIRLMEMSKDSLLGDKGQTART
Sbjct: 641 KEDVNEAIRLMEMSKDSLLGDKGQTART 668
>ref|XP_859831.1| PREDICTED: similar to DNA replication licensing factor MCM7 (CDC47
homolog) (P1.1-MCM3) isoform 4 [Canis familiaris].
Length = 389
Score = 556 bits (1434), Expect = e-158
Identities = 279/292 (95%), Positives = 283/292 (96%)
Frame = +3
Query: 3 AHREQVAMYIDLDDVTEDDPELVDSICENTKRYARPFADAVQELLPQYKEREVVNKDVLD 182
AHREQVAMYIDLDDV EDDPELVDSICEN +RY R FADAVQELLPQYKEREVVNKDVLD
Sbjct: 41 AHREQVAMYIDLDDVAEDDPELVDSICENARRYTRLFADAVQELLPQYKEREVVNKDVLD 100
Query: 183 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKL 362
VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSS+KPRVIREVRADSVGKL
Sbjct: 101 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSNKPRVIREVRADSVGKL 160
Query: 363 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 542
VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL
Sbjct: 161 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 220
Query: 543 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 722
YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI
Sbjct: 221 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 280
Query: 723 LRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQIAEEDF 878
LRTGFRQVVQGLLSETYLEAHR+VKMSKSEDDES A ELSREELRQI + F
Sbjct: 281 LRTGFRQVVQGLLSETYLEAHRVVKMSKSEDDESAAVELSREELRQITDVIF 332
>ref|XP_535063.2| PREDICTED: similar to minichromosome maintenance protein 4 [Canis
familiaris].
Length = 929
Score = 314 bits (804), Expect = 2e-85
Identities = 194/526 (36%), Positives = 295/526 (56%), Gaps = 13/526 (2%)
Frame = +3
Query: 252 NQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYT 431
++YP ++ ++ + ++ K + +R + D + +L+ + G+V R S++ P M A +
Sbjct: 313 DRYPDSILEH-QIQVRPFNALKTKNMRNLNPDDIDQLIAISGMVIRTSQLIPEMQEAFFQ 371
Query: 432 CDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQ 611
C C I +C + C T S ++ + S F Q +K+QE +
Sbjct: 372 CQVCAHTARVEIDRGRIAEPSVC--EHCHTTHSMALIHNR---SVFSDKQMIKLQESPED 426
Query: 612 VPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI-LRTGFRQVVQGLLSETYLEAHR 788
+P G P ++ + + QPGD V++TGI+ + +R R + +T+++
Sbjct: 427 MPAGQTPHTVILFAHNDLVDKVQPGDRVNITGIYRAVPIRVSSRVSNVKSVYKTHIDVIH 486
Query: 789 IVKMSKSED---DESGAGELSREELRQIAEE-----DFYEKLAASIAPEIYGHEDVKKAX 944
K DE +L E+ ++ +E D YE+LA+++AP IY HED+KK
Sbjct: 487 YRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGI 546
Query: 945 XXXXXXXX--DQSPRGM-KIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG 1115
D S G K R INI L GDPG +KSQLL Y+ L PR QYT+G+GSS
Sbjct: 547 LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA 606
Query: 1116 VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAK 1295
VGLTA V++D + +L L+ GALVL+D G+CCIDEFDKM E+ R+ +HEVMEQQT+SIAK
Sbjct: 607 VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAK 666
Query: 1296 AGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDL 1475
AGI+ LNAR SILAAANP ++NP+++ +NIQLP LLSRFDL++L+ D D D
Sbjct: 667 AGIICQLNARTSILAAANPVESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDR 726
Query: 1476 RLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRR 1652
RLA H+ ++ S + + E +DM +++ YIA P + + + + AYV+MR+
Sbjct: 727 RLAHHLVALYYRSEEQMEE-EFMDMAVLKDYIAYAHSMVMPRLSQEASQALIEAYVDMRK 785
Query: 1653 EAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRL 1790
+S+ R L +++RL+ A A++R VE DV EA RL
Sbjct: 786 -IGSSRGMVSAYPRQLESLIRLAEAHAKVRFSSKVEAVDVEEAKRL 830
>ref|XP_538960.2| PREDICTED: similar to DNA replication licensing factor MCM3 (DNA
polymerase alpha holoenzyme-associated protein P1) (RLF
beta subunit) (P102 protein) (P1-MCM3) [Canis
familiaris].
Length = 916
Score = 304 bits (778), Expect = 2e-82
Identities = 204/559 (36%), Positives = 298/559 (53%), Gaps = 54/559 (9%)
Frame = +3
Query: 282 FELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQ 461
F + +G SK R + + + +V V GIVT+ S V+P++V + + C +
Sbjct: 206 FYIGLEGSFGSKHVSPRTLTSCFLSCVVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIER 265
Query: 462 PIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRG--SKFIKFQEMKMQEHSDQVPVGNIPR 635
T L+ PS + L+T S + Q + +QE ++ P G +PR
Sbjct: 266 RYSDLT--TLVAFPSSSVYPTKDEENNPLETEYGLSVYKDHQTITIQEMPEKAPAGQLPR 323
Query: 636 SITVLVEGENTRIAQPGDHVSVTGIF--LPILRTGFRQVVQGLLSETYLEAHRIVKMSKS 809
S+ V+++ + +PGD V V G + LP + G+ T L A + +MSK
Sbjct: 324 SVDVILDDDLVDKVKPGDRVQVVGTYRCLPGKKGGYTSGT----FRTILIACNVKQMSKD 379
Query: 810 EDDESGAGELSR-EELRQIAEEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PR 983
A ++++ ++ + +D +++LA S+AP I+GH+ VKKA ++
Sbjct: 380 VQPSFSAEDIAKIKKFSKTRSKDIFDQLARSLAPSIHGHDYVKKAILCLLLGGVERDLEN 439
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
G IRG+INI L+GDP VAKSQLL Y+ APR+ TTGRGSSGVGLTAAV D +GE
Sbjct: 440 GSHIRGDINILLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGER 499
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GA+VLAD+GV CIDEFDKM++ DRTAIHEVMEQ ++IAKAGI LNARCS+LAA
Sbjct: 500 RLEAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAA 559
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH------ 1505
ANP YGRY+ ++ +NI L +LLSRFDLL+++ D+ D + D ++ H+ +H
Sbjct: 560 ANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHRYRAPG 619
Query: 1506 ------------------------QHSRQPPAQFEPLDMKL---------------MRRY 1568
Q +Q +E D L MR+Y
Sbjct: 620 EQDGDAMPLGSAVDILATDDPDFNQEDQQDTQIYEKHDNLLHGTKKKKEKMVSAAFMRKY 679
Query: 1569 IAMCREKQPTVPESLADYITAAYVEMRREAWASKDATYTS---ARTLLAILRLSTALARL 1739
I + + +P + + A YI Y +R + S D TS ARTL ++RL+TA A+
Sbjct: 680 IHVAKIIKPILTQESAAYIAEEYSRLRSQDSMSSDTARTSPVTARTLETLIRLATAHAKA 739
Query: 1740 RMVDTVEKEDVNEAIRLME 1796
RM TV+ +D EA+ L++
Sbjct: 740 RMSKTVDLQDAEEAVELVQ 758
>ref|XP_541736.2| PREDICTED: similar to minichromosome maintenance protein 2 [Canis
familiaris].
Length = 1001
Score = 303 bits (777), Expect = 3e-82
Identities = 185/518 (35%), Positives = 293/518 (56%), Gaps = 29/518 (5%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPS 506
+R +R + +L+ G+VT + V P++ + Y C++C S P +
Sbjct: 392 LRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKC---------SFVLGPFCQSQN 442
Query: 507 QE-----CQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTR 671
QE C +S G + + + +Q +++QE +V G +PRS ++ +
Sbjct: 443 QEVKPGSCPECQSAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVD 502
Query: 672 IAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREE 851
+PGD + +TGI+ + T + A+ + K +D++ GEL+ E+
Sbjct: 503 SCKPGDEIELTGIYHNNYDGSLNTANGFPVFATVILANHVAK----KDNKVAVGELTDED 558
Query: 852 LRQIA----EEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPRGM-KIRGNINIC 1016
++ I ++ EK+ ASIAP IYGHED+K+ ++P G K+RG+IN+
Sbjct: 559 VKMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVL 618
Query: 1017 LMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLAD 1196
L GDPG AKSQ L YI++++ R+ +TTG+G+S VGLTA V R VS E TLE GALVLAD
Sbjct: 619 LCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLAD 678
Query: 1197 QGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPR 1376
+GVC IDEFDKM + DRT+IHE MEQQ+ISI+KAGI+T+L ARC+I+AAANP GRY+P
Sbjct: 679 RGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTIIAAANPIGGRYDPS 738
Query: 1377 RSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI--TYVHQH-----------SR 1517
+ N+ L ++SRFD+L +++D D D LA+ + +++ H
Sbjct: 739 LTFSDNVDLTEPIISRFDVLCVVRDTVDPVQDEMLARFVVGSHIRHHPSNKEEGLGSSGT 798
Query: 1518 QPPAQ-----FEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRREAWASKDAT 1679
Q PA EPL +++++YI +EK P + + D + Y ++R+E+ A+
Sbjct: 799 QEPAMPNTYGVEPLPQEVLKKYIIYAKEKVHPKLNQMDQDKVAKMYSDLRKESMATGSIP 858
Query: 1680 YTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLM 1793
T R + +++R++ A AR+ + D V ++DV+ AIR+M
Sbjct: 859 IT-VRHIESMIRMAEAHARIHLRDYVIEDDVSMAIRVM 895
>ref|XP_533338.2| PREDICTED: similar to DNA replication licensing factor MCM6 (P105MCM)
[Canis familiaris].
Length = 955
Score = 298 bits (764), Expect = 9e-81
Identities = 190/559 (33%), Positives = 293/559 (52%), Gaps = 48/559 (8%)
Frame = +3
Query: 270 LMRRFELYFQG-PSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCG 446
L + F + FQ P+ K IRE+ + +G L + G V R V P +V T+ C C
Sbjct: 240 LAKDFYVAFQDLPTRHK---IRELTSSRIGLLTRISGQVVRTHPVHPELVSGTFLCLDCQ 296
Query: 447 AETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGN 626
Q + +C + C R R L T S+F+ FQ++++QE ++P G+
Sbjct: 297 TVIKDVEQQFKYTQPNICRNPVCANRR---RFLLDTNKSRFVDFQKVRIQETQAELPRGS 353
Query: 627 IPRSITVLVEGENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLE--------- 779
IPRS+ V++ E AQ GD TG + + + + G +ET
Sbjct: 354 IPRSLEVILRAEAVESAQAGDKCDFTGTLIVVPDVS-KLSIPGARAETNSRVSGVDGYET 412
Query: 780 --------------AHRIVKMS-----------------KSEDDESGAGELSREELRQIA 866
++R+V ++ + + ES +++ +E ++
Sbjct: 413 EGIRGLRALGVRDLSYRLVFLACCVAPTNPRFGGKELRDEEQTAESIKNQMTVKEWEKVF 472
Query: 867 E----EDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSP-RGMKIRGNINICLMGDP 1031
E ++ Y L S+ P I+G+++VK+ ++ G +RG+IN+C++GDP
Sbjct: 473 EMSQDKNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGDP 532
Query: 1032 GVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCC 1211
AKSQ L +++ +PR+ YT+G+ SS GLTAAV+RD S E +E GAL+LAD GVCC
Sbjct: 533 STAKSQFLKHVEEFSPRAVYTSGKASSAAGLTAAVVRDEESHEFVIEAGALMLADNGVCC 592
Query: 1212 IDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQ 1391
IDEFDKM D+ AIHE MEQQTISI KAG+ TLNAR SILAAANP G Y+ +SL+Q
Sbjct: 593 IDEFDKMDVRDQVAIHEAMEQQTISITKAGVKATLNARTSILAAANPISGHYDRSKSLKQ 652
Query: 1392 NIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYI 1571
NI L A ++SRFDL +++ D + D +A+ I V HSR + + +RRY+
Sbjct: 653 NINLSAPIMSRFDLFFILVDECNEVTDYAIARRI--VDLHSRIEDSIDRVYSLDDIRRYL 710
Query: 1572 AMCREKQPTVPESLADYITAAYVEMRRE--AWASKDATYTSARTLLAILRLSTALARLRM 1745
R+ +P + + D+I Y +R+ + +K + + R L +++RLS A+AR+
Sbjct: 711 LFARQFKPKISKESEDFIVEQYKRLRQRDGSGVTKSSWRITVRQLESMIRLSEAMARMHC 770
Query: 1746 VDTVEKEDVNEAIRLMEMS 1802
D V+ + V EA RL+ S
Sbjct: 771 CDEVQPKHVKEAFRLLNKS 789
>ref|XP_853134.1| PREDICTED: similar to DNA replication licensing factor MCM5 (CDC46
homolog) (P1-CDC46) [Canis familiaris].
Length = 634
Score = 282 bits (721), Expect = 9e-76
Identities = 184/521 (35%), Positives = 290/521 (55%), Gaps = 24/521 (4%)
Frame = +3
Query: 312 SKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPL 491
++P + V++D + LV + GI+ S V+ + + C C P
Sbjct: 32 NQPLLGGSVQSDMMSHLVKIPGIIISASGVRAKATRISIQCRSCRNTLSNIAMRPGLEGY 91
Query: 492 IMCPSQECQTNRSG------GRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLV 653
+ ++C T+++G ++ K + FQ +K+QE D VP G +PR + +
Sbjct: 92 AL--PRKCNTDQAGRPKCPLDPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYC 149
Query: 654 EGENTRIAQPGDHVSVTGIFLPILRTGF-----RQVVQGLLSETYLEAHRIVKMSKSEDD 818
+ PG+ V++ GI+ I + G R V + +Y+ I ++
Sbjct: 150 DRYLCDKVVPGNRVTIMGIY-SIKKFGLTTSKGRDRVGVGIRSSYIRVLGI-QVDTDGSG 207
Query: 819 ESGAGELS---REELRQIAE-EDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PR 983
S AG ++ EE R++A + YE ++ SIAP I+G D+KKA + P
Sbjct: 208 RSFAGAVTPQEEEEFRRLAALPNVYEVISKSIAPSIFGGTDMKKAIACLLFGGSRKRLPD 267
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
G+ RG+IN+ ++GDPG AKSQLL ++++ +P YT+G+GSS GLTA+V+RD S
Sbjct: 268 GLTRRGDINLLMLGDPGTAKSQLLKFVEKCSPIGVYTSGKGSSAAGLTASVMRDPSSRNF 327
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
+EGGA+VLAD GV CIDEFDKM E DR AIHE MEQQTISIAKAGI TTLN+RCS+LAA
Sbjct: 328 IMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAA 387
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHS-RQ 1520
AN +GR++ + E NI +LSRFD++++++D + + D+ LA+H+ +H + Q
Sbjct: 388 ANSVFGRWDETKG-EDNIDFMPTILSRFDMIFIVKDEHNEERDVMLAKHVITLHVSALTQ 446
Query: 1521 PPAQFEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRREA-WASKDATYTS-- 1688
A +D+ ++++IA CR K P + A+ + Y+ MR A +D+ S
Sbjct: 447 TQAVEGEVDLTKLKKFIAYCRAKCGPRLSAEAAEKLKNRYIIMRSGARQHERDSDRRSNI 506
Query: 1689 ---ARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS 1802
R L AI+R++ AL+++++ + DV EA+RL ++S
Sbjct: 507 PITVRQLEAIVRIAEALSKMKLQPFATEADVEEALRLFQVS 547
>ref|XP_541221.2| PREDICTED: similar to minichromosome maintenance protein domain
containing 1 [Canis familiaris].
Length = 1141
Score = 262 bits (670), Expect = 7e-70
Identities = 184/521 (35%), Positives = 290/521 (55%), Gaps = 20/521 (3%)
Frame = +3
Query: 318 PRVIRE--VRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPI---QSPTF 482
P ++RE + VG ++V G V R S VK Y C++C Q TF
Sbjct: 107 PELVREHIPKTKDVGHFLSVTGTVIRTSLVKILEFERDYMCNKCKHVFVVKADFEQYYTF 166
Query: 483 MPLIMCPSQE-CQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEG 659
CPS E C +++ L + + +QE+K+QE ++ VG+IPRS+ V++E
Sbjct: 167 CRPSSCPSLEGCDSSKFTCLSGLSSSPVRCRDYQEIKIQEQVQRLSVGSIPRSMKVILED 226
Query: 660 ENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGEL 839
+ + GD +++ G+ + + F+Q V+ + E L+A+ + ++E AG +
Sbjct: 227 DLVDSCKSGDDLTIYGVVMQRWKP-FQQDVRCEV-EIVLKANYV-----QVNNEQSAGIV 279
Query: 840 SREELRQIAEEDFYE-----------KLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPR- 983
EE+++ EDF+E ++ AS+ P+++G VK A ++
Sbjct: 280 MDEEVQK-EFEDFWESYKSDPFAGRNEILASLCPQVFGMYLVKLAVAMVLAGGIQRTDAS 338
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
G ++RG ++ L+GDPG KSQ L Y ++ PRS TTG GS+ GLT ++DS GE
Sbjct: 339 GTRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTTGIGSTSAGLTVTAVKDS--GEW 396
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GALVLAD G+CCIDEF+ + E DRT+IHE MEQQTIS+AKAG++ LN R +ILAA
Sbjct: 397 NLEAGALVLADAGLCCIDEFNSLKEHDRTSIHEAMEQQTISVAKAGLVCKLNTRTTILAA 456
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQP 1523
NP G+Y+P S+ NI L + LLSRFDL+ ++ D + D D ++ +++ ++ P
Sbjct: 457 TNPK-GQYDPHESVSVNIALGSPLLSRFDLILVLLDTKNEDWDRIIS---SFILENKGYP 512
Query: 1524 PAQFEPLDMKLMRRYIAMCREKQPTVPESLADYITAAYVEMRREAWASKDATYTSARTLL 1703
+ M+ M+ Y + R QPT+ + + + + Y +M+R++ S++A T+ R L
Sbjct: 513 SKSEKLWSMEKMKTYFCLIRNLQPTLSD-VGNQVLLRYYQMQRQS-DSRNAARTTIRLLE 570
Query: 1704 AILRLSTALARLRMVDTVEKEDVNEAIRLME--MSKDSLLG 1820
+++RL+ A ARL DTV ED A+ +ME M +LLG
Sbjct: 571 SLIRLAEAHARLMFRDTVTLEDAITAVSVMESSMQGGALLG 611
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 77,833,295
Number of extensions: 2312965
Number of successful extensions: 10392
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 10334
Number of HSP's successfully gapped: 16
Length of query: 614
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 505
Effective length of database: 15,240,880
Effective search space: 7696644400
Effective search space used: 7696644400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007879
(1844 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003354515.1| PREDICTED: DNA replication licensing factor ... 483 e-136
Alignment gi|XP_001924848.1| PREDICTED: DNA replication licensing factor ... 301 6e-82
Alignment gi|XP_003358597.1| PREDICTED: DNA replication licensing factor ... 287 2e-77
Alignment gi|XP_001927529.3| PREDICTED: DNA replication licensing factor ... 248 8e-66
Alignment gi|XP_003353280.1| PREDICTED: DNA replication licensing factor ... 102 9e-22
Alignment gi|XP_003353282.1| PREDICTED: DNA replication licensing factor ... 89 6e-18
Alignment gi|XP_003354516.1| PREDICTED: DNA replication licensing factor ... 69 1e-11
>ref|XP_003354515.1| PREDICTED: DNA replication licensing factor MCM7-like [Sus scrofa].
Length = 255
Score = 483 bits (1244), Expect = e-136
Identities = 246/255 (96%), Positives = 246/255 (96%)
Frame = +3
Query: 798 MSKSEDDESGAGELSREELRQIAEEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS 977
MSKSEDDESGAGELSREELRQIAEEDFYEKLAASIAPEIYGHEDVKKA DQS
Sbjct: 1 MSKSEDDESGAGELSREELRQIAEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQS 60
Query: 978 PRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSG 1157
PRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSG
Sbjct: 61 PRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSG 120
Query: 1158 ELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSIL 1337
ELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSIL
Sbjct: 121 ELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSIL 180
Query: 1338 AAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSR 1517
AAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSR
Sbjct: 181 AAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSR 240
Query: 1518 QPPAQFEPLDMKLMR 1562
QPPAQFEPLDMKLMR
Sbjct: 241 QPPAQFEPLDMKLMR 255
>ref|XP_001924848.1| PREDICTED: DNA replication licensing factor MCM3 [Sus scrofa].
Length = 808
Score = 301 bits (772), Expect = 6e-82
Identities = 200/557 (35%), Positives = 295/557 (52%), Gaps = 52/557 (9%)
Frame = +3
Query: 282 FELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQ 461
F + +G SK R + + + +V V GIVT+ S V+P++V + + C +
Sbjct: 98 FYIGLEGSFGSKHVSPRTLTSCFLSCVVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIER 157
Query: 462 PIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSI 641
T + S + L + S + Q + +QE ++ P G +PRS+
Sbjct: 158 RYTDLTTLEAFPSSSVYPTKDEENNPLETEYGLSVYKDHQIITIQEMPEKAPAGQLPRSV 217
Query: 642 TVLVEGENTRIAQPGDHVSVTGIF--LPILRTGFRQVVQGLLSETYLEAHRIVKMSKSED 815
V+++ + +PGD V V G + LP + G+ T L A + +MSK
Sbjct: 218 DVILDDDLVDKVKPGDRVQVVGTYRCLPGKKGGYTSGT----FRTVLIACNVKQMSKDAQ 273
Query: 816 DESGAGELSR-EELRQIAEEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PRGM 989
A ++++ ++ + +D +++LA S+AP I+GH+ VKKA ++ G
Sbjct: 274 PSFSAEDIAKIKKFSKTRSKDIFDQLARSLAPSIHGHDYVKKAILCLLLGGVERDLENGS 333
Query: 990 KIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTL 1169
IRG+INI L+GDP VAKSQLL Y+ APR+ TTGRGSSGVGLTAAV D +GE L
Sbjct: 334 HIRGDINILLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRL 393
Query: 1170 EGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAAN 1349
E GA+VLAD+GV CIDEFDKM++ DRTAIHEVMEQ ++IAKAGI LNARCS+LAAAN
Sbjct: 394 EAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAAAN 453
Query: 1350 PAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH-------- 1505
P YGRY+ ++ +NI L +LLSRFDLL+++ D+ D + D ++ H+ +H
Sbjct: 454 PVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHRYRAPGEQ 513
Query: 1506 ----------------------QHSRQPPAQFEPLDMKL---------------MRRYIA 1574
Q +Q +E D L M++YI
Sbjct: 514 DGDAMPLGSAVDILATDDPNFSQEDQQDTQIYEKHDNLLHGTKKKKEKMVSAAFMKKYIH 573
Query: 1575 MCREKQPTVPESLADYITAAYVEMRREAWASKDATYTS---ARTLLAILRLSTALARLRM 1745
+ + +P + + A YI Y +R + S D TS ARTL ++RL+TA A+ RM
Sbjct: 574 VAKIIKPALTQESAAYIAEEYSRLRSQDSMSSDTARTSPVTARTLETLIRLATAHAKARM 633
Query: 1746 VDTVEKEDVNEAIRLME 1796
TV+ +D EA+ L++
Sbjct: 634 SKTVDLQDAEEAVELVQ 650
>ref|XP_003358597.1| PREDICTED: DNA replication licensing factor MCM2 [Sus scrofa].
Length = 596
Score = 287 bits (734), Expect = 2e-77
Identities = 173/471 (36%), Positives = 267/471 (56%), Gaps = 27/471 (5%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCG--AETYQPIQSPTFMPLIMC 500
+R +R + +L+ G+VT + V P++ + Y C++CG + Q+ P C
Sbjct: 73 LRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCGFVLGPFCQSQNQEVKPG-SC 131
Query: 501 PSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQ 680
P ECQ S G + + + +Q +++QE +V G +PRS ++ + +
Sbjct: 132 P--ECQ---SAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCK 186
Query: 681 PGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQ 860
PGD + +TGI+ + T + A+ + K +D++ GEL+ E+++
Sbjct: 187 PGDEIELTGIYHNNYDGALNTANGFPVFATVILANHVAK----KDNKVAVGELTDEDVKM 242
Query: 861 IA----EEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPRGM-KIRGNINICLMG 1025
I ++ EK+ ASIAP IYGHED+K+ ++P G K+RG+IN+ L G
Sbjct: 243 ITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCG 302
Query: 1026 DPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGV 1205
DPG AKSQ L YI++++ R+ +TTG+G+S VGLTA V R VS E TLE GALVLAD+GV
Sbjct: 303 DPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGV 362
Query: 1206 CCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSL 1385
C IDEFDKM + DRT+IHE MEQQ+ISI+KAGI+T+L ARC+++AAANP GRY+P +
Sbjct: 363 CLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTF 422
Query: 1386 EQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQ----------- 1532
+N+ L ++SRFD+L +++D D D LA+ + V H R P+
Sbjct: 423 SENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFV--VGSHVRHHPSNKEDGGLGGTPE 480
Query: 1533 --------FEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRREA 1658
EPL +++R+YI +EK P + + D + Y ++R+E+
Sbjct: 481 PAMPNTYGVEPLPQEVLRKYIIYAKEKVHPKLNQMDQDKVAKMYSDLRKES 531
>ref|XP_001927529.3| PREDICTED: DNA replication licensing factor MCM8 [Sus scrofa].
Length = 837
Score = 248 bits (633), Expect = 8e-66
Identities = 170/549 (30%), Positives = 276/549 (50%), Gaps = 57/549 (10%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPS 506
++ VRA+ GK +++RG V RVS +KP + C CG + + CP
Sbjct: 204 LKNVRANYYGKYISLRGTVVRVSNIKPLCTKMAFLCATCGEIQSFSLPDGKYNLPTKCPI 263
Query: 507 QECQTNRSGGRLYLQTRGSKFI---KFQEMKMQE--HSDQVPVGNIPRSITVLVEGENTR 671
C+ G+ + R S +Q +K+QE DQ G IPR+I + +
Sbjct: 264 PACR-----GKSFTALRSSPLTVTTDWQSIKIQELMSDDQREAGRIPRTIECELVHDLVD 318
Query: 672 IAQPGDHVSVTGIF-LPILRTGFRQVVQGLLSETYLEAHRIVKM----SKSEDDESGAGE 836
PGD V++TG+ + G R + Y+EA+ + +K+ +D G
Sbjct: 319 SCVPGDTVTITGVVKVSNAEEGSRNKNDKCMFLLYVEANSVSNSKGQNTKTSEDGYKPGT 378
Query: 837 LSREELRQI-------AEEDFYEKLAASIAPEIYGHEDVKK----AXXXXXXXXXDQSPR 983
L L+ + +EE+ ++ + S+ P I+GHE VK A D R
Sbjct: 379 LMEFSLKDLYAIQEIQSEENLFKLIVNSLCPVIFGHELVKAGLALALFGGSQKYADDKNR 438
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
+ IRG+ +I ++GDPG+ KSQ+L +APR Y G ++ GLT + +DS SG+
Sbjct: 439 -IPIRGDPHILVVGDPGLGKSQMLQAACSVAPRGVYVCGNTTTTSGLTVTLSKDSSSGDF 497
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GALVL DQG+C IDEFDKM A+ E MEQQ+IS+AKAG++ +L AR SI+AA
Sbjct: 498 ALEAGALVLGDQGICGIDEFDKMGN-QHQALLEAMEQQSISLAKAGMVCSLPARTSIIAA 556
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQ- 1520
ANP G YN +++ +N+++ +ALLSRFDL++++ D P+ D+D L++H+ + ++
Sbjct: 557 ANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILLDTPNEDHDHLLSEHVIAIRAGKQRA 616
Query: 1521 ----------------------------------PPAQFEPLDMKLMRRYIAMCRE-KQP 1595
P + +P+ +L+R+YI R+ P
Sbjct: 617 VSSATVTRMNSQDSNTSILEVVSDKPLSERLKVVPGEEIDPIPHQLLRKYIGYARQYVYP 676
Query: 1596 TVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVN 1775
+ A + Y+E+R+++ + T+ R L +++RL+ A ARL + + KED
Sbjct: 677 RLSTEAAQILQDFYLELRKQSQRLNSSPITT-RQLESLIRLTEARARLELREEATKEDAE 735
Query: 1776 EAIRLMEMS 1802
+ + +M+ S
Sbjct: 736 DIVEIMKYS 744
>ref|XP_003353280.1| PREDICTED: DNA replication licensing factor MCM9 [Sus scrofa].
Length = 391
Score = 102 bits (253), Expect = 9e-22
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 18/287 (6%)
Frame = +3
Query: 318 PRVIRE--VRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPI---QSPTF 482
P ++RE + VG ++V G V R S VK Y C++C Q TF
Sbjct: 107 PELVREHIPKTKDVGHFLSVTGTVIRTSLVKILEFERDYMCNKCKHVFVVKADFEQYYTF 166
Query: 483 MPLIMCPSQE-CQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEG 659
CPS E C + + L + ++ +QE+K+QE ++ VG+IPRS+ V++E
Sbjct: 167 CRPSSCPSLESCGSTKFTCLSDLSSSPTRCRDYQEIKIQEQVQRLSVGSIPRSMKVILED 226
Query: 660 ENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGEL 839
+ + GD +++ G+ + + F+Q V+ + E L+A+ + ++E G
Sbjct: 227 DLVDSCKSGDDLTIYGVVMQRWKP-FQQDVRCEV-EIVLKANYV-----QVNNEQSTGIN 279
Query: 840 SREELRQIAEEDFYE-----------KLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPR- 983
EE+R+ EDF+E ++ AS+ P++YG VK A ++
Sbjct: 280 MDEEVRK-EFEDFWEYYKSDPFAGRNEILASLCPQVYGMYLVKLAVAMVLAGGIQRTDAT 338
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGL 1124
G ++RG ++ L+GDPG KSQ L Y ++ PRS TTG GS+ G+
Sbjct: 339 GTRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTTGIGSTSAGI 385
>ref|XP_003353282.1| PREDICTED: DNA replication licensing factor MCM9-like [Sus scrofa].
Length = 856
Score = 89.4 bits (220), Expect = 6e-18
Identities = 59/178 (33%), Positives = 103/178 (57%), Gaps = 2/178 (1%)
Frame = +3
Query: 1293 KAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDND 1472
+ ++ LN R +ILAA NP G+Y+P+ ++ NI L + LLSRFDL+ ++ D + D D
Sbjct: 159 RKNLVCKLNTRTTILAATNPK-GQYDPQETVSVNIALGSPLLSRFDLILVLLDTKNEDWD 217
Query: 1473 LRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPESLADYITAAYVEMRR 1652
++ +++ ++ P + M+ M+ Y + R QPT+ + + + + Y +M+R
Sbjct: 218 RVIS---SFILENKGYPSKSEKLWSMEKMKTYFCLIRNLQPTLSD-VGNQVLLRYYQMQR 273
Query: 1653 EAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLME--MSKDSLLG 1820
++ S++A T+ R L +++RL+ A ARL DTV ED A+ +ME M +LLG
Sbjct: 274 QS-DSRNAARTTIRLLESLIRLAEAHARLMFRDTVTLEDAITAVSVMESSMQGGALLG 330
>ref|XP_003354516.1| PREDICTED: DNA replication licensing factor MCM7-like [Sus scrofa].
Length = 99
Score = 68.6 bits (166), Expect = 1e-11
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3
Query: 1743 MVDTVEKEDVNEAIRLMEMSKDSLLGDKGQTART 1844
MVDTVEKEDVNEAIRLMEMSKDSLLGDKGQTART
Sbjct: 1 MVDTVEKEDVNEAIRLMEMSKDSLLGDKGQTART 34
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 48,151,273
Number of extensions: 1444682
Number of successful extensions: 6541
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 6507
Number of HSP's successfully gapped: 8
Length of query: 614
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 509
Effective length of database: 8,729,747
Effective search space: 4443441223
Effective search space used: 4443441223
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007879
(1844 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032594.1| DNA replication licensing factor MCM7 [Mus musc... 1129 0.0
Alignment gi|NP_032591.3| DNA replication licensing factor MCM4 [Mus musc... 316 4e-86
Alignment gi|NP_032589.1| DNA replication licensing factor MCM3 [Mus musc... 305 1e-82
Alignment gi|NP_032590.2| DNA replication licensing factor MCM2 [Mus musc... 304 2e-82
Alignment gi|NP_032593.1| DNA replication licensing factor MCM6 [Mus musc... 298 7e-81
Alignment gi|NP_032592.2| DNA replication licensing factor MCM5 [Mus musc... 289 6e-78
Alignment gi|NP_082106.2| DNA replication licensing factor MCM9 [Mus musc... 259 6e-69
Alignment gi|NP_079952.2| DNA replication licensing factor MCM8 [Mus musc... 249 5e-66
>ref|NP_032594.1| DNA replication licensing factor MCM7 [Mus musculus].
Length = 719
Score = 1129 bits (2919), Expect = 0.0
Identities = 567/614 (92%), Positives = 591/614 (96%)
Frame = +3
Query: 3 AHREQVAMYIDLDDVTEDDPELVDSICENTKRYARPFADAVQELLPQYKEREVVNKDVLD 182
AHREQVA+Y+DLDD+ EDDPELVDSICEN KRY+R F D VQELLP+YKE+EVVNKDVLD
Sbjct: 41 AHREQVALYVDLDDIAEDDPELVDSICENAKRYSRLFGDVVQELLPEYKEKEVVNKDVLD 100
Query: 183 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKL 362
VYIEHRLMMEQRSRDPGA R+PQNQYP ELMRRFELYF+GPSSSKPRVIREVRADSVGKL
Sbjct: 101 VYIEHRLMMEQRSRDPGAVRNPQNQYPSELMRRFELYFRGPSSSKPRVIREVRADSVGKL 160
Query: 363 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 542
+TVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL
Sbjct: 161 LTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 220
Query: 543 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 722
YLQTRGSKF+KFQEMK+QEHSDQVPVGNIPRSITV++EGENTRIAQPGDHVSVTGIFLP+
Sbjct: 221 YLQTRGSKFVKFQEMKIQEHSDQVPVGNIPRSITVVLEGENTRIAQPGDHVSVTGIFLPV 280
Query: 723 LRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQIAEEDFYEKLAASI 902
LRTGF+Q+ QGLLSETYLEAH IVKM+KS+DD SGAGELS EEL+QIAEEDFYEKLAASI
Sbjct: 281 LRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAASI 340
Query: 903 APEIYGHEDVKKAXXXXXXXXXDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR 1082
APEIYGHEDVKKA DQSP+GMKIRGNI+ICLMGDPGVAKSQLLSYIDRLAPR
Sbjct: 341 APEIYGHEDVKKALLLLLVGGVDQSPQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPR 400
Query: 1083 SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE 1262
SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE
Sbjct: 401 SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE 460
Query: 1263 VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL 1442
VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQN+QLPAALLSRFDLLWL
Sbjct: 461 VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNVQLPAALLSRFDLLWL 520
Query: 1443 IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPESLADY 1622
IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMC E+QPTVPESLADY
Sbjct: 521 IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCHERQPTVPESLADY 580
Query: 1623 ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS 1802
ITAAYVEMRREA ASKDATYTSARTLLAILRLSTALARLRMVD VEKEDVNEAIRLMEMS
Sbjct: 581 ITAAYVEMRREARASKDATYTSARTLLAILRLSTALARLRMVDIVEKEDVNEAIRLMEMS 640
Query: 1803 KDSLLGDKGQTART 1844
KDSLLG+KGQTART
Sbjct: 641 KDSLLGEKGQTART 654
>ref|NP_032591.3| DNA replication licensing factor MCM4 [Mus musculus].
Length = 862
Score = 316 bits (809), Expect = 4e-86
Identities = 197/526 (37%), Positives = 295/526 (56%), Gaps = 13/526 (2%)
Frame = +3
Query: 252 NQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYT 431
++YP ++ ++ + ++ K + +R + + + +L+T+ G+V R S++ P M A +
Sbjct: 246 DRYPDSILEH-QIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQ 304
Query: 432 CDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQ 611
C C T I C C T S ++ + S F Q +K+QE +
Sbjct: 305 CQVCAHTTRVEIDRGRIAE--PCSCVHCHTTHSMALIHNR---SFFSDKQMIKLQESPED 359
Query: 612 VPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI-LRTGFRQVVQGLLSETYLEAHR 788
+P G P +I + + QPGD V+VTGI+ + +R R + +T+++
Sbjct: 360 MPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIH 419
Query: 789 IVKMSKSE----DDESGAGELSREELRQIAE----EDFYEKLAASIAPEIYGHEDVKKAX 944
K D+E+ S + ++ + E D YE+LA+++AP IY HED+KK
Sbjct: 420 YRKTDAKRLHGLDEEAEQKLFSEKRVKLLKELSRKPDIYERLASALAPSIYEHEDIKKGI 479
Query: 945 XXXXXXXX--DQSPRGM-KIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG 1115
D S G K R INI L GDPG +KSQLL Y+ L PR QYT+G+GSS
Sbjct: 480 LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA 539
Query: 1116 VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAK 1295
VGLTA V++D + +L L+ GALVL+D G+CCIDEFDKM E+ R+ +HEVMEQQT+SIAK
Sbjct: 540 VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAK 599
Query: 1296 AGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDL 1475
AGI+ LNAR S+LAAANP ++NP+++ +NIQLP LLSRFDL++L+ D D D
Sbjct: 600 AGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDR 659
Query: 1476 RLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRR 1652
RLA H+ ++ S + + E LDM +++ YIA P + E + + AYV MR+
Sbjct: 660 RLAHHLVSLYYQSEE-QVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRK 718
Query: 1653 EAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRL 1790
+S+ R L +++RL+ A A++R + VE DV EA RL
Sbjct: 719 -IGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRL 763
>ref|NP_032589.1| DNA replication licensing factor MCM3 [Mus musculus].
Length = 812
Score = 305 bits (780), Expect = 1e-82
Identities = 202/557 (36%), Positives = 298/557 (53%), Gaps = 52/557 (9%)
Frame = +3
Query: 282 FELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQ 461
F + +G SK R + + + +V V GIVT+ S V+P++V + + C +
Sbjct: 98 FYIGLEGSFGSKHVSPRTLTSCFLSCVVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIER 157
Query: 462 PIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRG--SKFIKFQEMKMQEHSDQVPVGNIPR 635
T L+ PS + L+T S + Q + +QE ++ P G +PR
Sbjct: 158 RYSDLT--TLVAFPSSSVYPTKDEENNPLETEYGLSVYKDHQTITIQEMPEKAPAGQLPR 215
Query: 636 SITVLVEGENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSED 815
S+ V+++ + +PGD + V G + + G + T L A + +MSK
Sbjct: 216 SVDVILDDDLVDKVKPGDRIQVVGTYRCL--PGKKGCYTSGTFRTVLIACNVKQMSKDIQ 273
Query: 816 DESGAGELSR-EELRQIAEEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PRGM 989
A ++++ ++ + +D +E+LA S+AP I+GH+ VKKA ++ G
Sbjct: 274 PAFSADDIAKIKKFSKTRSKDVFEQLARSLAPSIHGHDYVKKAILCLLLGGVERELENGS 333
Query: 990 KIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTL 1169
IRG+INI L+GDP VAKSQLL Y+ APR+ TTGRGSSGVGLTAAV D +GE L
Sbjct: 334 HIRGDINILLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRL 393
Query: 1170 EGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAAN 1349
E GA+VLAD+GV CIDEFDKM++ DRTAIHEVMEQ ++IAKAGI LNARCS+LAAAN
Sbjct: 394 EAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAAAN 453
Query: 1350 PAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQH------ 1511
P YGRY+ ++ +NI L +LLSRFDLL+++ D+ D + D ++ H+ +HQ+
Sbjct: 454 PVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHQYRAPGEQ 513
Query: 1512 ------------------------SRQPPAQFEPLDMKL---------------MRRYIA 1574
+Q +E D L M++YI
Sbjct: 514 DGDALPLGSSVDILATDDPDFTQDDQQDTRIYEKHDSLLHGTKKKKEKMVSAAFMKKYIH 573
Query: 1575 MCREKQPTVPESLADYITAAYVEMRREAWASKDATYTS---ARTLLAILRLSTALARLRM 1745
+ + +PT+ + A YI Y +R + S D TS ARTL ++RL+TA A+ RM
Sbjct: 574 VAKIIKPTLTQESAAYIAEEYSRLRSQDSMSSDTARTSPVTARTLETLIRLATAHAKARM 633
Query: 1746 VDTVEKEDVNEAIRLME 1796
TV+ +D EA+ L++
Sbjct: 634 SKTVDLQDAEEAVELVQ 650
>ref|NP_032590.2| DNA replication licensing factor MCM2 [Mus musculus].
Length = 904
Score = 304 bits (778), Expect = 2e-82
Identities = 186/518 (35%), Positives = 294/518 (56%), Gaps = 29/518 (5%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCG--AETYQPIQSPTFMPLIMC 500
+R +R + +L+ G+VT + V P++ + Y C +C + Q+ P C
Sbjct: 294 LRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCSKCNFVLGPFCQSQNQEVKPG-SC 352
Query: 501 PSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQ 680
P ECQ S G + + + +Q +++QE +V G +PRS ++ + +
Sbjct: 353 P--ECQ---SAGPFEINMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCK 407
Query: 681 PGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQ 860
PGD + +TGI+ + T + A+ + K +D++ GEL+ E+++
Sbjct: 408 PGDEIELTGIYHNNYDGSLNTANGFPVFATIILANHVAK----KDNKVAVGELTDEDVKM 463
Query: 861 IA----EEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPRGM-KIRGNINICLMG 1025
I ++ EK+ ASIAP IYGHED+K+ ++P G K+RG+IN+ L G
Sbjct: 464 ITGLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCG 523
Query: 1026 DPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGV 1205
DPG AKSQ L YI++++ R+ +TTG+G+S VGLTA V R VS E TLE GALVLAD+GV
Sbjct: 524 DPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGV 583
Query: 1206 CCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSL 1385
C IDEFDKM + DRT+IHE MEQQ+ISI+KAGI+T+L ARC+++AAANP GRY+P +
Sbjct: 584 CLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTF 643
Query: 1386 EQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQ----------- 1532
+N+ L ++SRFD+L +++D D D LA+ + V H R P+
Sbjct: 644 SENVDLTEPIISRFDVLCVVRDTVDPVQDEMLARFV--VGSHVRHHPSNKKDEGLTNGGT 701
Query: 1533 ----------FEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRREAWASKDAT 1679
EPL +++++YI +E+ +P + + D + Y ++R+E+ A+
Sbjct: 702 LEPAMPNTYGVEPLPQEVLKKYIIYAKERVRPKLNQMDQDKVARMYSDLRKESMATGSIP 761
Query: 1680 YTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLM 1793
T R + +++R++ A AR+ + D V ++DVN AIR+M
Sbjct: 762 IT-VRHIESMIRMAEAHARMHLRDYVMEDDVNMAIRVM 798
>ref|NP_032593.1| DNA replication licensing factor MCM6 [Mus musculus].
Length = 821
Score = 298 bits (764), Expect = 7e-81
Identities = 183/538 (34%), Positives = 287/538 (53%), Gaps = 46/538 (8%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPS 506
IRE+ + +G L + G V R V P +V T+ C C Q + +C +
Sbjct: 123 IRELTSSRIGLLTRISGQVVRTHPVHPELVSGTFLCLDCQTVIKDVEQQFKYTQPNICRN 182
Query: 507 QECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPG 686
C + R L T S+F+ FQ++++QE ++P G+IPRS+ V++ E AQ G
Sbjct: 183 PVCANRK---RFLLDTNKSRFVDFQKVRIQETQAELPRGSIPRSLEVILRAEAVESAQAG 239
Query: 687 DHVSVTGIFLPI------------LRTGFR---------QVVQGLLSETYLE-AHRIVKM 800
D TG + + T R + ++GL + + ++R+V +
Sbjct: 240 DRCDFTGALIVVPDVSKLSTPGARAETNSRVSGADGYETEGIRGLRALGVRDLSYRLVFL 299
Query: 801 S-----------------KSEDDESGAGELSREELRQIAE----EDFYEKLAASIAPEIY 917
+ + + ES +++ +E ++ E ++ Y L S+ P I+
Sbjct: 300 ACHVAPTNPRFGGKELRDEEQTAESIKNQMTVKEWEKVFEMSQDKNLYHNLCTSLFPTIH 359
Query: 918 GHEDVKKAXXXXXXXXXDQSP-RGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYT 1094
G+++VK+ ++ G +RG+IN+C++GDP AKSQ L ++D +PR+ YT
Sbjct: 360 GNDEVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGDPSTAKSQFLKHVDEFSPRAVYT 419
Query: 1095 TGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQ 1274
+G+ SS GLTAAV+RD S E +E GAL+LAD GVCCIDEFDKM D+ AIHE MEQ
Sbjct: 420 SGKASSAAGLTAAVVRDEESHEFVIEAGALMLADNGVCCIDEFDKMDMRDQVAIHEAMEQ 479
Query: 1275 QTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDR 1454
QTISI KAG+ TLNAR SILAAANP G Y+ +SL+QNI L A ++SRFDL +++ D
Sbjct: 480 QTISITKAGVKATLNARTSILAAANPVSGHYDRSKSLKQNINLSAPIMSRFDLFFILVDE 539
Query: 1455 PDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPESLADYITAA 1634
+ D +A+ I +H + + LD +RRY+ R+ +P + + D+I
Sbjct: 540 CNEVTDYAIARRIVDLHSRIEESIDRVYSLDD--IRRYLLFARQFKPKISKESEDFIVEQ 597
Query: 1635 YVEMRRE--AWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS 1802
Y +R+ + +K + + R L +++RLS ++AR+ D V+ + V EA RL+ S
Sbjct: 598 YKRLRQRDGSGVTKSSWRITVRQLESMIRLSESMARMHCCDEVQPKHVKEAFRLLNKS 655
>ref|NP_032592.2| DNA replication licensing factor MCM5 [Mus musculus].
Length = 734
Score = 289 bits (739), Expect = 6e-78
Identities = 190/561 (33%), Positives = 308/561 (54%), Gaps = 24/561 (4%)
Frame = +3
Query: 192 EHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKLVTV 371
EH ++E+ +++ + EL++ ++ + S + P IR +++D + LV +
Sbjct: 94 EHLQLLEEAAKEVADEVTRPRPAGDELLQDIQVMLK--SDASPSSIRILKSDMMSHLVKI 151
Query: 372 RGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSG------ 533
GI+ S V+ + + C C P + ++C +++G
Sbjct: 152 PGIIISASAVRAKATRISIQCRSCHNTLTNIAMRPGLEGYAL--PRKCNMDQAGRPKCPL 209
Query: 534 GRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIF 713
++ K + FQ +K+QE D VP G +PR + + + PG+ V++ GI+
Sbjct: 210 DPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYCDRYLCDKVVPGNRVTIMGIY 269
Query: 714 LPILRTGF-----RQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELS---REELRQIAE 869
I + G R V + +Y+ I ++ S AG +S EE R++A
Sbjct: 270 -SIKKFGLNPSKGRDRVGVGIRSSYIRVLGI-QVDTDGSGRSFAGSVSPQEEEEFRRLAA 327
Query: 870 -EDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PRGMKIRGNINICLMGDPGVAK 1043
+ YE ++ SI+P I+G D+KKA + P G+ RG+IN+ ++GDPG AK
Sbjct: 328 LPNIYELISKSISPSIFGGMDMKKAIACLLFGGSRKRLPDGLTRRGDINLLMLGDPGTAK 387
Query: 1044 SQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEF 1223
SQLL ++++ +P YT+G+GSS GLTA+V+RD S +EGGA+VLAD GV CIDEF
Sbjct: 388 SQLLKFVEKCSPIGVYTSGKGSSAAGLTASVIRDPSSRNFIMEGGAMVLADGGVVCIDEF 447
Query: 1224 DKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQL 1403
DKM E DR AIHE MEQQTISIAKAGI TTLN+RCS+LAAAN +GR++ + E NI
Sbjct: 448 DKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDETKG-EDNIDF 506
Query: 1404 PAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHS-RQPPAQFEPLDMKLMRRYIAMC 1580
+LSRFD++++++D + + D+ LA+H+ +H + Q A +D+ M+++IA C
Sbjct: 507 MPTILSRFDMIFIVKDEHNEERDMMLAKHVMTLHVSALTQTQAVEGEIDLAKMKKFIAYC 566
Query: 1581 REK-QPTVPESLADYITAAYVEMRREA-WASKDATYTSA-----RTLLAILRLSTALARL 1739
R + P + A+ + Y+ MR A +D+ S+ R L AI+R++ AL+++
Sbjct: 567 RARCGPRLSAEAAEKLKNRYIIMRSGARQHERDSDRRSSIPITVRQLEAIVRIAEALSKM 626
Query: 1740 RMVDTVEKEDVNEAIRLMEMS 1802
++ + DV EA+RL ++S
Sbjct: 627 KLQPFATEADVEEALRLFQVS 647
>ref|NP_082106.2| DNA replication licensing factor MCM9 [Mus musculus].
Length = 1290
Score = 259 bits (661), Expect = 6e-69
Identities = 179/529 (33%), Positives = 285/529 (53%), Gaps = 28/529 (5%)
Frame = +3
Query: 318 PRVIRE--VRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQC--------GAETYQPI 467
P ++RE + VG ++V G V R S VK Y C++C E Y
Sbjct: 263 PELVREHIPKTKDVGHFLSVTGTVIRTSLVKVLEFERDYMCNKCKHVFMVEADFEQYYTF 322
Query: 468 QSPTFMPLIMCPS-QECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSIT 644
P+ CPS C +++ L + ++ +QE+K+QE ++ VG+IPRS+
Sbjct: 323 SRPS-----SCPSLASCDSSKFSCLSDLSSSPARCRDYQEIKIQEQVQRLSVGSIPRSMK 377
Query: 645 VLVEGENTRIAQPGDHVSVTGIFLPILRTGFRQV---VQGLLSETYLEAHRIVKMSKSED 815
V++E + + GD +++ G+ + + R V V+ +L Y++ +
Sbjct: 378 VILEDDLVDSCKSGDDLTIYGVVMQRWKPFQRDVRCEVEIVLKANYVQVN---------- 427
Query: 816 DESGAGELSREELRQIAEEDFYE-----------KLAASIAPEIYGHEDVKKAXXXXXXX 962
+E +G + E+ R+ EDF+E ++ AS+ P+++G VK A
Sbjct: 428 NEQSSGMVMDEDTRK-EFEDFWEHYKSDPFAGRNEILASLCPQVFGMYLVKLAVAMVLAG 486
Query: 963 XXDQSPR-GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVL 1139
++ G ++RG ++ L+GDPG KSQ L Y ++ PRS TTG GS+ GLT +
Sbjct: 487 GIQRTDAAGTRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTTGIGSTSAGLTVTAV 546
Query: 1140 RDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLN 1319
+DS GE LE GALVLAD G+CCIDEF+ + E DRT+IHE MEQQTIS+AKAG++ LN
Sbjct: 547 KDS--GEWNLEAGALVLADAGLCCIDEFNSLKEHDRTSIHEAMEQQTISVAKAGLVCKLN 604
Query: 1320 ARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITY 1499
R +ILAA NP G+Y+P+ S+ NI L + LLSRFDL+ ++ D + D D ++ ++
Sbjct: 605 TRTTILAATNPK-GQYDPKESVSVNIALGSPLLSRFDLVLVLLDTRNEDWDRIIS---SF 660
Query: 1500 VHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPESLADYITAAYVEMRREAWASKDAT 1679
+ ++ P M+ M+ Y + R PT+ E +++ + Y +M+R++ S++A
Sbjct: 661 ILENKGYPSKSENLWSMEKMKTYFCLIRNLHPTLSE-VSNQVLLRYYQMQRQS-DSRNAA 718
Query: 1680 YTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLME--MSKDSLLG 1820
T+ R L +++RL+ A ARL V ED A+ +ME M +LLG
Sbjct: 719 RTTIRLLESLIRLAEAHARLMFRSAVTLEDAVTAVSVMESSMQGGALLG 767
>ref|NP_079952.2| DNA replication licensing factor MCM8 [Mus musculus].
Length = 805
Score = 249 bits (636), Expect = 5e-66
Identities = 179/555 (32%), Positives = 279/555 (50%), Gaps = 57/555 (10%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPS 506
++ +RA GK +++RG V RVS +KP + C CG P+ + CP
Sbjct: 172 LKNIRATCYGKYISIRGTVVRVSNIKPLCTNMAFQCAACGEIQSFPLPDGKYTLPTKCPV 231
Query: 507 QECQTNRSGGRLYLQTRGSKF---IKFQEMKMQE--HSDQVPVGNIPRSITVLVEGENTR 671
C+ GR + R S + +Q +K+QE Q G IPR+I + +
Sbjct: 232 PACR-----GRSFAPLRSSPLTVTLDWQLIKIQELMSDAQREAGRIPRTIECELVHDLVD 286
Query: 672 IAQPGDHVSVTGIF-LPILRTGFRQVVQGLLSETYLEAHRIV--KMSKSEDDESGAG--- 833
PGD V+VTGI + G R + Y+EA+ + K K++ E G
Sbjct: 287 SCVPGDTVTVTGIVKVSNSEEGSRNKNDKCMFLLYIEANSVSNSKGPKAQTAEDGCKHGT 346
Query: 834 --ELSREELRQI----AEEDFYEKLAASIAPEIYGHEDVKK----AXXXXXXXXXDQSPR 983
E S ++L I AEE+ + + S+ P I+GHE VK A D R
Sbjct: 347 LMEFSLKDLYAIREIQAEENLLKLVVNSLCPVIFGHELVKAGLTLALFGGSQKYADDKNR 406
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
+ IRG+ ++ ++GDPG+ KSQ+L +APR Y G ++ GLT + +DS SG+
Sbjct: 407 -IPIRGDPHVLIVGDPGLGKSQMLQAACNVAPRGVYVCGNTTTSSGLTVTLSKDSSSGDF 465
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GALVL DQG+C IDEFDKM A+ E MEQQ+IS+AKAG++ +L AR SI+AA
Sbjct: 466 ALEAGALVLGDQGICGIDEFDKMGN-QHQALLEAMEQQSISLAKAGVVCSLPARTSIIAA 524
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQ- 1520
ANP G YN R++ +N+++ +ALLSRFDL++++ D P+ +D L++H+ + ++
Sbjct: 525 ANPVGGHYNKARTVSENLKMGSALLSRFDLVFILLDTPNEQHDHLLSEHVIAIRAGKQKA 584
Query: 1521 ----------------------------------PPAQFEPLDMKLMRRYIAMCRE-KQP 1595
P Q +P+ +L+R+YI R+ P
Sbjct: 585 VSSATVTRVLSQDSNTSVLEVVSEKPLSERLKVAPGEQTDPIPHQLLRKYIGYARQYVHP 644
Query: 1596 TVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVN 1775
+ A + Y+E+R+++ + T+ R L +++RL+ A ARL + + +ED
Sbjct: 645 RLSTDAAQALQDFYLELRKQSQRVGSSPITT-RQLESLIRLTEARARLELREEATREDAE 703
Query: 1776 EAIRLMEMSKDSLLG 1820
+ I +M K S+LG
Sbjct: 704 DIIEIM---KHSMLG 715
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 64,395,589
Number of extensions: 1877936
Number of successful extensions: 8299
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 8261
Number of HSP's successfully gapped: 10
Length of query: 614
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 507
Effective length of database: 12,403,707
Effective search space: 6288679449
Effective search space used: 6288679449
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007879
(1844 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_005907.3| DNA replication licensing factor MCM7 isoform 1... 1160 0.0
Alignment gi|NP_877577.1| DNA replication licensing factor MCM7 isoform 2... 912 0.0
Alignment gi|NP_877423.1| DNA replication licensing factor MCM4 [Homo sap... 317 2e-86
Alignment gi|NP_005905.2| DNA replication licensing factor MCM4 [Homo sap... 317 2e-86
Alignment gi|NP_002379.2| DNA replication licensing factor MCM3 [Homo sap... 305 9e-83
Alignment gi|NP_004517.2| DNA replication licensing factor MCM2 [Homo sap... 304 2e-82
Alignment gi|NP_005906.2| DNA replication licensing factor MCM6 [Homo sap... 299 7e-81
Alignment gi|NP_006730.2| DNA replication licensing factor MCM5 [Homo sap... 291 1e-78
Alignment gi|NP_060166.2| DNA replication licensing factor MCM9 isoform 1... 259 6e-69
Alignment gi|NP_115874.3| DNA replication licensing factor MCM8 isoform 1... 253 5e-67
>ref|NP_005907.3| DNA replication licensing factor MCM7 isoform 1 [Homo sapiens].
Length = 719
Score = 1160 bits (3002), Expect = 0.0
Identities = 587/614 (95%), Positives = 597/614 (97%)
Frame = +3
Query: 3 AHREQVAMYIDLDDVTEDDPELVDSICENTKRYARPFADAVQELLPQYKEREVVNKDVLD 182
AHREQVA+Y+DLDDV EDDPELVDSICEN +RYA+ FADAVQELLPQYKEREVVNKDVLD
Sbjct: 41 AHREQVALYVDLDDVAEDDPELVDSICENARRYAKLFADAVQELLPQYKEREVVNKDVLD 100
Query: 183 VYIEHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKL 362
VYIEHRLMMEQRSRDPG RSPQNQYP ELMRRFELYFQGPSS+KPRVIREVRADSVGKL
Sbjct: 101 VYIEHRLMMEQRSRDPGMVRSPQNQYPAELMRRFELYFQGPSSNKPRVIREVRADSVGKL 160
Query: 363 VTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 542
VTVRGIVTRVSEVKP+MVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL
Sbjct: 161 VTVRGIVTRVSEVKPKMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRL 220
Query: 543 YLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 722
YLQTRGS+FIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI
Sbjct: 221 YLQTRGSRFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI 280
Query: 723 LRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQIAEEDFYEKLAASI 902
LRTGFRQVVQGLLSETYLEAHRIVKM+KSEDDESGAGEL+REELRQIAEEDFYEKLAASI
Sbjct: 281 LRTGFRQVVQGLLSETYLEAHRIVKMNKSEDDESGAGELTREELRQIAEEDFYEKLAASI 340
Query: 903 APEIYGHEDVKKAXXXXXXXXXDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR 1082
APEIYGHEDVKKA DQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR
Sbjct: 341 APEIYGHEDVKKALLLLLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPR 400
Query: 1083 SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE 1262
SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE
Sbjct: 401 SQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHE 460
Query: 1263 VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL 1442
VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL
Sbjct: 461 VMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWL 520
Query: 1443 IQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPESLADY 1622
IQDRPDRDNDLRLAQHITYVHQHSRQPP+QFEPLDMKLMRRYIAMCREKQP VPESLADY
Sbjct: 521 IQDRPDRDNDLRLAQHITYVHQHSRQPPSQFEPLDMKLMRRYIAMCREKQPMVPESLADY 580
Query: 1623 ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMS 1802
ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVD VEKEDVNEAIRLMEMS
Sbjct: 581 ITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDVVEKEDVNEAIRLMEMS 640
Query: 1803 KDSLLGDKGQTART 1844
KDSLLGDKGQTART
Sbjct: 641 KDSLLGDKGQTART 654
>ref|NP_877577.1| DNA replication licensing factor MCM7 isoform 2 [Homo sapiens].
Length = 543
Score = 912 bits (2358), Expect = 0.0
Identities = 463/478 (96%), Positives = 467/478 (97%)
Frame = +3
Query: 411 MVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMK 590
MVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGS+FIKFQEMK
Sbjct: 1 MVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSRFIKFQEMK 60
Query: 591 MQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSET 770
MQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSET
Sbjct: 61 MQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSET 120
Query: 771 YLEAHRIVKMSKSEDDESGAGELSREELRQIAEEDFYEKLAASIAPEIYGHEDVKKAXXX 950
YLEAHRIVKM+KSEDDESGAGEL+REELRQIAEEDFYEKLAASIAPEIYGHEDVKKA
Sbjct: 121 YLEAHRIVKMNKSEDDESGAGELTREELRQIAEEDFYEKLAASIAPEIYGHEDVKKALLL 180
Query: 951 XXXXXXDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTA 1130
DQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTA
Sbjct: 181 LLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTA 240
Query: 1131 AVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILT 1310
AVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILT
Sbjct: 241 AVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILT 300
Query: 1311 TLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH 1490
TLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH
Sbjct: 301 TLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQH 360
Query: 1491 ITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREKQPTVPESLADYITAAYVEMRREAWASK 1670
ITYVHQHSRQPP+QFEPLDMKLMRRYIAMCREKQP VPESLADYITAAYVEMRREAWASK
Sbjct: 361 ITYVHQHSRQPPSQFEPLDMKLMRRYIAMCREKQPMVPESLADYITAAYVEMRREAWASK 420
Query: 1671 DATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLMEMSKDSLLGDKGQTART 1844
DATYTSARTLLAILRLSTALARLRMVD VEKEDVNEAIRLMEMSKDSLLGDKGQTART
Sbjct: 421 DATYTSARTLLAILRLSTALARLRMVDVVEKEDVNEAIRLMEMSKDSLLGDKGQTART 478
>ref|NP_877423.1| DNA replication licensing factor MCM4 [Homo sapiens].
Length = 863
Score = 317 bits (813), Expect = 2e-86
Identities = 197/526 (37%), Positives = 299/526 (56%), Gaps = 13/526 (2%)
Frame = +3
Query: 252 NQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYT 431
++YP ++ ++ + ++ K + +R + + + +L+T+ G+V R S++ P M A +
Sbjct: 247 DRYPDSILEH-QIQVRPFNALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQ 305
Query: 432 CDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQ 611
C C T + +C C T S ++ + S F Q +K+QE +
Sbjct: 306 CQVCAHTTRVEMDRGRIAEPSVCG--RCHTTHSMALIHNR---SLFSDKQMIKLQESPED 360
Query: 612 VPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI-LRTGFRQVVQGLLSETYLEAHR 788
+P G P ++ + + QPGD V+VTGI+ + +R R + +T+++
Sbjct: 361 MPAGQTPHTVILFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIH 420
Query: 789 IVKMSKSED---DESGAGELSREELRQIAEE-----DFYEKLAASIAPEIYGHEDVKKAX 944
K DE +L E+ ++ +E D YE+LA+++AP IY HED+KK
Sbjct: 421 YRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGI 480
Query: 945 XXXXXXXX--DQSPRGM-KIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG 1115
D S G K R INI L GDPG +KSQLL Y+ L PR QYT+G+GSS
Sbjct: 481 LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA 540
Query: 1116 VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAK 1295
VGLTA V++D + +L L+ GALVL+D G+CCIDEFDKM E+ R+ +HEVMEQQT+SIAK
Sbjct: 541 VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAK 600
Query: 1296 AGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDL 1475
AGI+ LNAR S+LAAANP ++NP+++ +NIQLP LLSRFDL++L+ D D D
Sbjct: 601 AGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLLLDPQDEAYDR 660
Query: 1476 RLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRR 1652
RLA H+ ++ S + A+ E LDM +++ YIA P + E + + AYV+MR+
Sbjct: 661 RLAHHLVALYYQSEE-QAEEELLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVDMRK 719
Query: 1653 EAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRL 1790
+S+ R L +++RL+ A A++R+ + VE DV EA RL
Sbjct: 720 -IGSSRGMVSAYPRQLESLIRLAEAHAKVRLSNKVEAIDVEEAKRL 764
>ref|NP_005905.2| DNA replication licensing factor MCM4 [Homo sapiens].
Length = 863
Score = 317 bits (813), Expect = 2e-86
Identities = 197/526 (37%), Positives = 299/526 (56%), Gaps = 13/526 (2%)
Frame = +3
Query: 252 NQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYT 431
++YP ++ ++ + ++ K + +R + + + +L+T+ G+V R S++ P M A +
Sbjct: 247 DRYPDSILEH-QIQVRPFNALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQ 305
Query: 432 CDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQ 611
C C T + +C C T S ++ + S F Q +K+QE +
Sbjct: 306 CQVCAHTTRVEMDRGRIAEPSVCG--RCHTTHSMALIHNR---SLFSDKQMIKLQESPED 360
Query: 612 VPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPI-LRTGFRQVVQGLLSETYLEAHR 788
+P G P ++ + + QPGD V+VTGI+ + +R R + +T+++
Sbjct: 361 MPAGQTPHTVILFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIH 420
Query: 789 IVKMSKSED---DESGAGELSREELRQIAEE-----DFYEKLAASIAPEIYGHEDVKKAX 944
K DE +L E+ ++ +E D YE+LA+++AP IY HED+KK
Sbjct: 421 YRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGI 480
Query: 945 XXXXXXXX--DQSPRGM-KIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG 1115
D S G K R INI L GDPG +KSQLL Y+ L PR QYT+G+GSS
Sbjct: 481 LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA 540
Query: 1116 VGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAK 1295
VGLTA V++D + +L L+ GALVL+D G+CCIDEFDKM E+ R+ +HEVMEQQT+SIAK
Sbjct: 541 VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAK 600
Query: 1296 AGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDL 1475
AGI+ LNAR S+LAAANP ++NP+++ +NIQLP LLSRFDL++L+ D D D
Sbjct: 601 AGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLLLDPQDEAYDR 660
Query: 1476 RLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRR 1652
RLA H+ ++ S + A+ E LDM +++ YIA P + E + + AYV+MR+
Sbjct: 661 RLAHHLVALYYQSEE-QAEEELLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVDMRK 719
Query: 1653 EAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVNEAIRL 1790
+S+ R L +++RL+ A A++R+ + VE DV EA RL
Sbjct: 720 -IGSSRGMVSAYPRQLESLIRLAEAHAKVRLSNKVEAIDVEEAKRL 764
>ref|NP_002379.2| DNA replication licensing factor MCM3 [Homo sapiens].
Length = 808
Score = 305 bits (781), Expect = 9e-83
Identities = 204/559 (36%), Positives = 299/559 (53%), Gaps = 54/559 (9%)
Frame = +3
Query: 282 FELYFQGPSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQ 461
F + +G SK R + + + +V V GIVT+ S V+P++V + + C +
Sbjct: 98 FYVGLEGSFGSKHVSPRTLTSCFLSCVVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIER 157
Query: 462 PIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRG--SKFIKFQEMKMQEHSDQVPVGNIPR 635
T L+ PS + L+T S + Q + +QE ++ P G +PR
Sbjct: 158 RYSDLT--TLVAFPSSSVYPTKDEENNPLETEYGLSVYKDHQTITIQEMPEKAPAGQLPR 215
Query: 636 SITVLVEGENTRIAQPGDHVSVTGIF--LPILRTGFRQVVQGLLSETYLEAHRIVKMSKS 809
S+ V+++ + A+PGD V V G + LP + G+ T L A + +MSK
Sbjct: 216 SVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTSGT----FRTVLIACNVKQMSKD 271
Query: 810 EDDESGAGELSR-EELRQIAEEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PR 983
A ++++ ++ + +D +++LA S+AP I+GH+ VKKA ++
Sbjct: 272 AQPSFSAEDIAKIKKFSKTRSKDIFDQLAKSLAPSIHGHDYVKKAILCLLLGGVERDLEN 331
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
G IRG+INI L+GDP VAKSQLL Y+ APR+ TTGRGSSGVGLTAAV D +GE
Sbjct: 332 GSHIRGDINILLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGER 391
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GA+VLAD+GV CIDEFDKM++ DRTAIHEVMEQ ++IAKAGI LNARCS+LAA
Sbjct: 392 RLEAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAA 451
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVH------ 1505
ANP YGRY+ ++ +NI L +LLSRFDLL+++ D+ D + D ++ H+ +H
Sbjct: 452 ANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHRYRAPG 511
Query: 1506 ------------------------QHSRQPPAQFEPLDMKL---------------MRRY 1568
Q +Q +E D L M++Y
Sbjct: 512 EQDGDAMPLGSAVDILATDDPNFSQEDQQDTQIYEKHDNLLHGTKKKKEKMVSAAFMKKY 571
Query: 1569 IAMCREKQPTVPESLADYITAAYVEMRREAWASKDATYTS---ARTLLAILRLSTALARL 1739
I + + +P + + A YI Y +R + S D TS ARTL ++RL+TA A+
Sbjct: 572 IHVAKIIKPVLTQESATYIAEEYSRLRSQDSMSSDTARTSPVTARTLETLIRLATAHAKA 631
Query: 1740 RMVDTVEKEDVNEAIRLME 1796
RM TV+ +D EA+ L++
Sbjct: 632 RMSKTVDLQDAEEAVELVQ 650
>ref|NP_004517.2| DNA replication licensing factor MCM2 [Homo sapiens].
Length = 904
Score = 304 bits (778), Expect = 2e-82
Identities = 187/516 (36%), Positives = 296/516 (57%), Gaps = 27/516 (5%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCG--AETYQPIQSPTFMPLIMC 500
+R +R + +L+ G+VT + V P++ + Y C++C + Q+ P C
Sbjct: 294 LRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVKPG-SC 352
Query: 501 PSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQ 680
P ECQ S G + + + +Q +++QE +V G +PRS ++ + +
Sbjct: 353 P--ECQ---SAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCK 407
Query: 681 PGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELSREELRQ 860
PGD + +TGI+ + T + A+ + K +D++ GEL+ E+++
Sbjct: 408 PGDEIELTGIYHNNYDGSLNTANGFPVFATVILANHVAK----KDNKVAVGELTDEDVKM 463
Query: 861 IA----EEDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSPRGM-KIRGNINICLMG 1025
I ++ EK+ ASIAP IYGHED+K+ ++P G K+RG+IN+ L G
Sbjct: 464 ITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCG 523
Query: 1026 DPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGV 1205
DPG AKSQ L YI++++ R+ +TTG+G+S VGLTA V R VS E TLE GALVLAD+GV
Sbjct: 524 DPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGV 583
Query: 1206 CCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSL 1385
C IDEFDKM + DRT+IHE MEQQ+ISI+KAGI+T+L ARC+++AAANP GRY+P +
Sbjct: 584 CLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTF 643
Query: 1386 EQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI--TYVHQH------------SRQP 1523
+N+ L ++SRFD+L +++D D D LA+ + ++V H S
Sbjct: 644 SENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEGLANGSAAE 703
Query: 1524 PAQ-----FEPLDMKLMRRYIAMCREK-QPTVPESLADYITAAYVEMRREAWASKDATYT 1685
PA EPL +++++YI +E+ P + + D + Y ++R+E+ A+ T
Sbjct: 704 PAMPNTYGVEPLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIPIT 763
Query: 1686 SARTLLAILRLSTALARLRMVDTVEKEDVNEAIRLM 1793
R + +++R++ A AR+ + D V ++DVN AIR+M
Sbjct: 764 -VRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVM 798
>ref|NP_005906.2| DNA replication licensing factor MCM6 [Homo sapiens].
Length = 821
Score = 299 bits (765), Expect = 7e-81
Identities = 190/558 (34%), Positives = 296/558 (53%), Gaps = 47/558 (8%)
Frame = +3
Query: 270 LMRRFELYFQG-PSSSKPRVIREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCG 446
L + F + FQ P+ K IRE+ + +G L + G V R V P +V T+ C C
Sbjct: 106 LAKDFYVAFQDLPTRHK---IRELTSSRIGLLTRISGQVVRTHPVHPELVSGTFLCLDCQ 162
Query: 447 AETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGN 626
Q + +C + C R R L T S+F+ FQ++++QE ++P G+
Sbjct: 163 TVIRDVEQQFKYTQPNICRNPVCANRR---RFLLDTNKSRFVDFQKVRIQETQAELPRGS 219
Query: 627 IPRSITVLVEGENTRIAQPGDHVSVTGIFLPI------------LRTGFR---------Q 743
IPRS+ V++ E AQ GD TG + + T R +
Sbjct: 220 IPRSLEVILRAEAVESAQAGDKCDFTGTLIVVPDVSKLSTPGARAETNSRVSGVDGYETE 279
Query: 744 VVQGLLSETYLE-AHRIVKMS-----------------KSEDDESGAGELSREELRQIAE 869
++GL + + ++R+V ++ + + ES +++ +E ++ E
Sbjct: 280 GIRGLRALGVRDLSYRLVFLACCVAPTNPRFGGKELRDEEQTAESIKNQMTVKEWEKVFE 339
Query: 870 ----EDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQSP-RGMKIRGNINICLMGDPG 1034
++ Y L S+ P I+G+++VK+ ++ G +RG+IN+C++GDP
Sbjct: 340 MSQDKNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGDPS 399
Query: 1035 VAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCI 1214
AKSQ L +++ +PR+ YT+G+ SS GLTAAV+RD S E +E GAL+LAD GVCCI
Sbjct: 400 TAKSQFLKHVEEFSPRAVYTSGKASSAAGLTAAVVRDEESHEFVIEAGALMLADNGVCCI 459
Query: 1215 DEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQN 1394
DEFDKM D+ AIHE MEQQTISI KAG+ TLNAR SILAAANP G Y+ +SL+QN
Sbjct: 460 DEFDKMDVRDQVAIHEAMEQQTISITKAGVKATLNARTSILAAANPISGHYDRSKSLKQN 519
Query: 1395 IQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPAQFEPLDMKLMRRYIA 1574
I L A ++SRFDL +++ D + D +A+ I +H + + LD +RRY+
Sbjct: 520 INLSAPIMSRFDLFFILVDECNEVTDYAIARRIVDLHSRIEESIDRVYSLDD--IRRYLL 577
Query: 1575 MCREKQPTVPESLADYITAAYVEMRRE--AWASKDATYTSARTLLAILRLSTALARLRMV 1748
R+ +P + + D+I Y +R+ + +K + + R L +++RLS A+AR+
Sbjct: 578 FARQFKPKISKESEDFIVEQYKHLRQRDGSGVTKSSWRITVRQLESMIRLSEAMARMHCC 637
Query: 1749 DTVEKEDVNEAIRLMEMS 1802
D V+ + V EA RL+ S
Sbjct: 638 DEVQPKHVKEAFRLLNKS 655
>ref|NP_006730.2| DNA replication licensing factor MCM5 [Homo sapiens].
Length = 734
Score = 291 bits (745), Expect = 1e-78
Identities = 191/561 (34%), Positives = 309/561 (55%), Gaps = 24/561 (4%)
Frame = +3
Query: 192 EHRLMMEQRSRDPGAARSPQNQYPPELMRRFELYFQGPSSSKPRVIREVRADSVGKLVTV 371
EH ++E+ +++ + E+++ ++ + S + P IR +++D + LV +
Sbjct: 94 EHLQLLEEAAKEVADEVTRPRPSGEEVLQDIQVMLK--SDASPSSIRSLKSDMMSHLVKI 151
Query: 372 RGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSG------ 533
GI+ S V+ + + C C P + ++C T+++G
Sbjct: 152 PGIIIAASAVRAKATRISIQCRSCRNTLTNIAMRPGLEGYAL--PRKCNTDQAGRPKCPL 209
Query: 534 GRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIF 713
++ K + FQ +K+QE D VP G +PR + + + PG+ V++ GI+
Sbjct: 210 DPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYCDRYLCDKVVPGNRVTIMGIY 269
Query: 714 LPILRTGF-----RQVVQGLLSETYLEAHRIVKMSKSEDDESGAGELS---REELRQIAE 869
I + G R V + +Y+ I ++ S AG +S EE R++A
Sbjct: 270 -SIKKFGLTTSRGRDRVGVGIRSSYIRVLGI-QVDTDGSGRSFAGAVSPQEEEEFRRLAA 327
Query: 870 -EDFYEKLAASIAPEIYGHEDVKKAXXXXXXXXXDQS-PRGMKIRGNINICLMGDPGVAK 1043
+ YE ++ SIAP I+G D+KKA + P G+ RG+IN+ ++GDPG AK
Sbjct: 328 LPNVYEVISKSIAPSIFGGTDMKKAIACLLFGGSRKRLPDGLTRRGDINLLMLGDPGTAK 387
Query: 1044 SQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGVCCIDEF 1223
SQLL ++++ +P YT+G+GSS GLTA+V+RD S +EGGA+VLAD GV CIDEF
Sbjct: 388 SQLLKFVEKCSPIGVYTSGKGSSAAGLTASVMRDPSSRNFIMEGGAMVLADGGVVCIDEF 447
Query: 1224 DKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSLEQNIQL 1403
DKM E DR AIHE MEQQTISIAKAGI TTLN+RCS+LAAAN +GR++ + E NI
Sbjct: 448 DKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDETKG-EDNIDF 506
Query: 1404 PAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHS-RQPPAQFEPLDMKLMRRYIAMC 1580
+LSRFD++++++D + + D+ LA+H+ +H + Q A +D+ ++++IA C
Sbjct: 507 MPTILSRFDMIFIVKDEHNEERDVMLAKHVITLHVSALTQTQAVEGEIDLAKLKKFIAYC 566
Query: 1581 REK-QPTVPESLADYITAAYVEMRREA-WASKDATYTSA-----RTLLAILRLSTALARL 1739
R K P + A+ + Y+ MR A +D+ S+ R L AI+R++ AL+++
Sbjct: 567 RVKCGPRLSAEAAEKLKNRYIIMRSGARQHERDSDRRSSIPITVRQLEAIVRIAEALSKM 626
Query: 1740 RMVDTVEKEDVNEAIRLMEMS 1802
++ + DV EA+RL ++S
Sbjct: 627 KLQPFATEADVEEALRLFQVS 647
>ref|NP_060166.2| DNA replication licensing factor MCM9 isoform 1 [Homo sapiens].
Length = 1143
Score = 259 bits (662), Expect = 6e-69
Identities = 183/521 (35%), Positives = 289/521 (55%), Gaps = 20/521 (3%)
Frame = +3
Query: 318 PRVIRE--VRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPI---QSPTF 482
P ++RE + VG ++V G V R S VK Y C++C Q TF
Sbjct: 107 PELVREHIPKTKDVGHFLSVTGTVIRTSLVKVLEFERDYMCNKCKHVFVIKADFEQYYTF 166
Query: 483 MPLIMCPSQE-CQTNRSGGRLYLQTRGSKFIKFQEMKMQEHSDQVPVGNIPRSITVLVEG 659
CPS E C +++ L + ++ +QE+K+QE ++ VG+IPRS+ V++E
Sbjct: 167 CRPSSCPSLESCDSSKFTCLSGLSSSPTRCRDYQEIKIQEQVQRLSVGSIPRSMKVILED 226
Query: 660 ENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMSKSEDDESGAGEL 839
+ + GD +++ GI + + F+Q V+ + E L+A+ I ++E +G +
Sbjct: 227 DLVDSCKSGDDLTIYGIVMQRWKP-FQQDVRCEV-EIVLKANYI-----QVNNEQSSGII 279
Query: 840 SREELRQIAEEDFYEK-----------LAASIAPEIYGHEDVKKAXXXXXXXXXDQSPR- 983
EE+++ EDF+E + AS+ P+++G VK A ++
Sbjct: 280 MDEEVQK-EFEDFWEYYKSDPFAGRNVILASLCPQVFGMYLVKLAVAMVLAGGIQRTDAT 338
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
G ++RG ++ L+GDPG KSQ L Y ++ PRS TTG GS+ GLT ++DS GE
Sbjct: 339 GTRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTTGIGSTSAGLTVTAVKDS--GEW 396
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GALVLAD G+CCIDEF+ + E DRT+IHE MEQQTIS+AKAG++ LN R +ILAA
Sbjct: 397 NLEAGALVLADAGLCCIDEFNSLKEHDRTSIHEAMEQQTISVAKAGLVCKLNTRTTILAA 456
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQP 1523
NP G+Y+P+ S+ NI L + LLSRFDL+ ++ D + D D ++ +++ ++ P
Sbjct: 457 TNPK-GQYDPQESVSVNIALGSPLLSRFDLILVLLDTKNEDWDRIIS---SFILENKGYP 512
Query: 1524 PAQFEPLDMKLMRRYIAMCREKQPTVPESLADYITAAYVEMRREAWASKDATYTSARTLL 1703
+ M+ M+ Y + R QPT+ + + + + Y +M+R++ ++A T+ R L
Sbjct: 513 SKSEKLWSMEKMKTYFCLIRNLQPTLSD-VGNQVLLRYYQMQRQS-DCRNAARTTIRLLE 570
Query: 1704 AILRLSTALARLRMVDTVEKEDVNEAIRLME--MSKDSLLG 1820
+++RL+ A ARL DTV ED + +ME M +LLG
Sbjct: 571 SLIRLAEAHARLMFRDTVTLEDAITVVSVMESSMQGGALLG 611
>ref|NP_115874.3| DNA replication licensing factor MCM8 isoform 1 [Homo sapiens].
Length = 840
Score = 253 bits (645), Expect = 5e-67
Identities = 175/549 (31%), Positives = 276/549 (50%), Gaps = 57/549 (10%)
Frame = +3
Query: 327 IREVRADSVGKLVTVRGIVTRVSEVKPRMVVATYTCDQCGAETYQPIQSPTFMPLIMCPS 506
++ VRA+ GK + +RG V RVS +KP + C CG P+ + CP
Sbjct: 207 LKNVRANYYGKYIALRGTVVRVSNIKPLCTKMAFLCAACGEIQSFPLPDGKYSLPTKCPV 266
Query: 507 QECQTNRSGGRLYLQTRGSKF---IKFQEMKMQE--HSDQVPVGNIPRSITVLVEGENTR 671
C+ GR + R S + +Q +K+QE DQ G IPR+I + +
Sbjct: 267 PVCR-----GRSFTALRSSPLTVTMDWQSIKIQELMSDDQREAGRIPRTIECELVHDLVD 321
Query: 672 IAQPGDHVSVTGIF-LPILRTGFRQVVQGLLSETYLEAHRIV----KMSKSEDDESGAGE 836
PGD V++TGI + G R + Y+EA+ I + +KS +D G
Sbjct: 322 SCVPGDTVTITGIVKVSNAEEGSRNKNDKCMFLLYIEANSISNSKGQKTKSSEDGCKHGM 381
Query: 837 LSREELRQI-------AEEDFYEKLAASIAPEIYGHEDVKK----AXXXXXXXXXDQSPR 983
L L+ + AEE+ ++ + S+ P I+GHE VK A D R
Sbjct: 382 LMEFSLKDLYAIQEIQAEENLFKLIVNSLCPVIFGHELVKAGLALALFGGSQKYADDKNR 441
Query: 984 GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGEL 1163
+ IRG+ +I ++GDPG+ KSQ+L +APR Y G ++ GLT + +DS SG+
Sbjct: 442 -IPIRGDPHILVVGDPGLGKSQMLQAACNVAPRGVYVCGNTTTTSGLTVTLSKDSSSGDF 500
Query: 1164 TLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAA 1343
LE GALVL DQG+C IDEFDKM A+ E MEQQ+IS+AKAG++ +L AR SI+AA
Sbjct: 501 ALEAGALVLGDQGICGIDEFDKMGN-QHQALLEAMEQQSISLAKAGVVCSLPARTSIIAA 559
Query: 1344 ANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQ- 1520
ANP G YN +++ +N+++ +ALLSRFDL++++ D P+ +D L++H+ + ++
Sbjct: 560 ANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILLDTPNEHHDHLLSEHVIAIRAGKQRT 619
Query: 1521 ----------------------------------PPAQFEPLDMKLMRRYIAMCRE-KQP 1595
P +P+ +L+R+YI R+ P
Sbjct: 620 ISSATVARMNSQDSNTSVLEVVSEKPLSERLKVVPGETIDPIPHQLLRKYIGYARQYVYP 679
Query: 1596 TVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDTVEKEDVN 1775
+ A + Y+E+R+++ + T+ R L +++RL+ A ARL + + KED
Sbjct: 680 RLSTEAARVLQDFYLELRKQSQRLNSSPITT-RQLESLIRLTEARARLELREEATKEDAE 738
Query: 1776 EAIRLMEMS 1802
+ + +M+ S
Sbjct: 739 DIVEIMKYS 747
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 76,306,378
Number of extensions: 2263583
Number of successful extensions: 9845
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 9782
Number of HSP's successfully gapped: 14
Length of query: 614
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 505
Effective length of database: 14,704,088
Effective search space: 7425564440
Effective search space used: 7425564440
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007879
(1844 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 64 3e-07
>Sscrofa_Chr02
|| Length = 162569375
Score = 63.9 bits (32), Expect = 3e-07
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1747 tggacactgtggagaaggaagacgtgaacgaagccataaggctgatgg 1794
||||||| |||||||||||||| ||||| |||||||||||||| ||||
Sbjct: 122909681 tggacacagtggagaaggaagatgtgaatgaagccataaggctaatgg 122909728
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 44,816,508
Number of extensions: 251
Number of successful extensions: 251
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 251
Number of HSP's successfully gapped: 1
Length of query: 1844
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1822
Effective length of database: 2,808,408,574
Effective search space: 5116920421828
Effective search space used: 5116920421828
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)