Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007946
(988 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001030466.1| inhibitor of growth protein 4 [Bos taurus]. 436 e-122
Alignment gi|XP_001253820.3| PREDICTED: inhibitor of growth family, membe... 361 e-100
Alignment gi|NP_001035670.1| inhibitor of growth protein 5 [Bos taurus]. 316 2e-86
Alignment gi|NP_001071382.1| inhibitor of growth protein 1 [Bos taurus]. 174 1e-43
Alignment gi|NP_001180154.1| inhibitor of growth protein 2 [Bos taurus]. 155 5e-38
Alignment gi|XP_002698696.1| PREDICTED: inhibitor of growth family, membe... 155 5e-38
Alignment gi|NP_001179873.1| inhibitor of growth protein 3 [Bos taurus]. 109 3e-24
Alignment gi|XP_002686952.1| PREDICTED: inhibitor of growth family, membe... 109 3e-24
>ref|NP_001030466.1| inhibitor of growth protein 4 [Bos taurus].
Length = 248
Score = 436 bits (1121), Expect = e-122
Identities = 216/248 (87%), Positives = 217/248 (87%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLA+EYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLASEYMSSARSRSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLRQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
RTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV
Sbjct: 121 YDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 180
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIE FHFACVGLTTKPRGKWFCPR
Sbjct: 181 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIERFHFACVGLTTKPRGKWFCPR 240
Query: 740 CSQERKKK 763
CSQERKKK
Sbjct: 241 CSQERKKK 248
>ref|XP_001253820.3| PREDICTED: inhibitor of growth family, member 4-like, partial [Bos
taurus].
Length = 215
Score = 361 bits (927), Expect = e-100
Identities = 180/215 (83%), Positives = 181/215 (84%), Gaps = 4/215 (1%)
Frame = +2
Query: 131 LKAEIDKLATEYMXXXXXXXXXXXXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHI 310
LKAEIDKLA+EYM QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHI
Sbjct: 1 LKAEIDKLASEYMSSARSRSSEEKLALLRQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHI 60
Query: 311 RRLDTDLARFEADLKEKQIEXXXXXXXXXXXXXX----RTQKEKKAARARSKGKNSDEEA 478
RRLDTDLARFEADLKEKQIE RTQKEKKAARARSKGKNSDEEA
Sbjct: 61 RRLDTDLARFEADLKEKQIESSDYDSSSSKGKKSEEGGRTQKEKKAARARSKGKNSDEEA 120
Query: 479 PKAAQKKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDN 658
PKAAQKKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDN
Sbjct: 121 PKAAQKKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDN 180
Query: 659 PDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK 763
PDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK
Sbjct: 181 PDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK 215
>ref|NP_001035670.1| inhibitor of growth protein 5 [Bos taurus].
Length = 240
Score = 316 bits (809), Expect = 2e-86
Identities = 161/248 (64%), Positives = 176/248 (70%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MA MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+
Sbjct: 1 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSSDQ 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
+IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K
Sbjct: 61 RVEHLQKIQSAYNKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKLEGSDF 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
R QKEK+ +R R + + S+++ PK + K T T SV
Sbjct: 121 ESAGGRGLKKGRGQKEKRGSRGRGR-RTSEDDTPKKKKHKGGSEFTD--------TILSV 171
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKWFCPR
Sbjct: 172 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPR 231
Query: 740 CSQERKKK 763
C QER+KK
Sbjct: 232 CVQERRKK 239
>ref|NP_001071382.1| inhibitor of growth protein 1 [Bos taurus].
Length = 278
Score = 174 bits (441), Expect = 1e-43
Identities = 97/271 (35%), Positives = 141/271 (52%), Gaps = 20/271 (7%)
Frame = +2
Query: 35 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXX 214
Y+E YLDSIE+LPF+LQRN LMR++D + +++ E+D+ Y
Sbjct: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEY---YERFKREADGAQKRRAL 71
Query: 215 XQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXXXXXXX 394
IQ A + +E GD+K+QL Q E+V+ R++D+ + EA
Sbjct: 72 HCIQRALIRSQELGDEKIQLVSQMVELVENRARQVDSHVELLEAQQDAADATGHSKAGQD 131
Query: 395 XXXXXXRTQKEK---KAARARSKGKNSD-----------------EEAPKAAQKKLKLVR 514
Q EK K +R + +N + E+ KA++KK +
Sbjct: 132 KSKNEAIAQAEKPNNKRSRRQRNNENRENAANNHDHDDVTSGTPKEKKAKASKKKKRSKA 191
Query: 515 TSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFAC 694
+ P+ D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+C
Sbjct: 192 KAEREASPA------------DLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSC 239
Query: 695 VGLTTKPRGKWFCPRCSQERKKK*TRALDSN 787
VGL+ KP+GKW+CP+C E +K +AL+ +
Sbjct: 240 VGLSHKPKGKWYCPKCRGESEKTMDKALEKS 270
>ref|NP_001180154.1| inhibitor of growth protein 2 [Bos taurus].
Length = 283
Score = 155 bits (392), Expect = 5e-38
Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 10/252 (3%)
Frame = +2
Query: 35 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXX 214
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y
Sbjct: 30 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKEDDSNQKKRLQQ-- 87
Query: 215 XQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT------DLARFEADLKEKQIEXX 376
+Q A +E GD+K+Q+ Q E+V+ R+++ D A E + +++
Sbjct: 88 -HLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERAADKAKMDSS 146
Query: 377 XXXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQ----KKLKLVRTSPEYGMPSV 544
RT + + + ++ D++ PK + KK K + E V
Sbjct: 147 QPERSSRRPRRQRTSESRDLCHMTNGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 206
Query: 545 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 724
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 207 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 255
Query: 725 WFCPRCSQERKK 760
W+CP+C + +K
Sbjct: 256 WYCPKCRGDNEK 267
>ref|XP_002698696.1| PREDICTED: inhibitor of growth family, member 2 [Bos taurus].
Length = 283
Score = 155 bits (392), Expect = 5e-38
Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 10/252 (3%)
Frame = +2
Query: 35 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXX 214
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y
Sbjct: 30 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKEDDSNQKKRLQQ-- 87
Query: 215 XQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT------DLARFEADLKEKQIEXX 376
+Q A +E GD+K+Q+ Q E+V+ R+++ D A E + +++
Sbjct: 88 -HLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERAADKAKMDSS 146
Query: 377 XXXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQ----KKLKLVRTSPEYGMPSV 544
RT + + + ++ D++ PK + KK K + E V
Sbjct: 147 QPERSSRRPRRQRTSESRDLCHMTNGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 206
Query: 545 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 724
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 207 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 255
Query: 725 WFCPRCSQERKK 760
W+CP+C + +K
Sbjct: 256 WYCPKCRGDNEK 267
>ref|NP_001179873.1| inhibitor of growth protein 3 [Bos taurus].
Length = 418
Score = 109 bits (273), Expect = 3e-24
Identities = 41/66 (62%), Positives = 53/66 (80%)
Frame = +2
Query: 575 LDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQER 754
+D DPNEP YC+C+QVSYGEM+GCDN DC IEWFH+ CVGLT P+GKW+CP+C+
Sbjct: 351 VDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAM 410
Query: 755 KKK*TR 772
K++ +R
Sbjct: 411 KRRGSR 416
Score = 78.2 bits (191), Expect = 1e-14
Identities = 37/108 (34%), Positives = 65/108 (60%)
Frame = +2
Query: 32 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXX 211
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+
Sbjct: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
Query: 212 XXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLK 355
I++ Y K E D+KVQLA Q Y++VD+H+R+LD +LA+F+ +L+
Sbjct: 62 MASIKKDYYKALEDADEKVQLANQIYDLVDRHLRKLDQELAKFKMELE 109
>ref|XP_002686952.1| PREDICTED: inhibitor of growth family, member 3-like [Bos taurus].
Length = 418
Score = 109 bits (273), Expect = 3e-24
Identities = 41/66 (62%), Positives = 53/66 (80%)
Frame = +2
Query: 575 LDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQER 754
+D DPNEP YC+C+QVSYGEM+GCDN DC IEWFH+ CVGLT P+GKW+CP+C+
Sbjct: 351 VDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAM 410
Query: 755 KKK*TR 772
K++ +R
Sbjct: 411 KRRGSR 416
Score = 78.2 bits (191), Expect = 1e-14
Identities = 37/108 (34%), Positives = 65/108 (60%)
Frame = +2
Query: 32 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXX 211
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+
Sbjct: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
Query: 212 XXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLK 355
I++ Y K E D+KVQLA Q Y++VD+H+R+LD +LA+F+ +L+
Sbjct: 62 MASIKKDYYKALEDADEKVQLANQIYDLVDRHLRKLDQELAKFKMELE 109
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,320,616
Number of extensions: 1317651
Number of successful extensions: 5963
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 5917
Number of HSP's successfully gapped: 10
Length of query: 329
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 226
Effective length of database: 14,273,310
Effective search space: 3225768060
Effective search space used: 3225768060
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007946
(988 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_853656.1| PREDICTED: similar to Inhibitor of growth prote... 437 e-122
Alignment gi|XP_867735.1| PREDICTED: similar to Inhibitor of growth prote... 420 e-117
Alignment gi|XP_534907.2| PREDICTED: similar to inhibitor of growth famil... 414 e-116
Alignment gi|XP_854098.1| PREDICTED: similar to inhibitor of growth famil... 402 e-112
Alignment gi|XP_867714.1| PREDICTED: similar to Inhibitor of growth prote... 389 e-108
Alignment gi|XP_867723.1| PREDICTED: similar to inhibitor of growth famil... 379 e-105
Alignment gi|XP_867659.1| PREDICTED: similar to inhibitor of growth famil... 365 e-101
Alignment gi|XP_848604.1| PREDICTED: similar to inhibitor of growth famil... 295 5e-80
Alignment gi|XP_856524.1| PREDICTED: similar to inhibitor of growth famil... 280 2e-75
Alignment gi|XP_867668.1| PREDICTED: similar to inhibitor of growth famil... 198 8e-51
>ref|XP_853656.1| PREDICTED: similar to Inhibitor of growth protein 4 isoform 2
[Canis familiaris].
Length = 249
Score = 437 bits (1123), Expect = e-122
Identities = 217/249 (87%), Positives = 217/249 (87%), Gaps = 1/249 (0%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXX-RTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGS 556
RTQKEKKAARARSKGKNSDEEAPKA QKKLKLVRTSPEYGMPSVTFGS
Sbjct: 121 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKATQKKLKLVRTSPEYGMPSVTFGS 180
Query: 557 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 736
VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
Sbjct: 181 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 240
Query: 737 RCSQERKKK 763
RCSQERKKK
Sbjct: 241 RCSQERKKK 249
>ref|XP_867735.1| PREDICTED: similar to Inhibitor of growth protein 4 isoform 10
[Canis familiaris].
Length = 243
Score = 420 bits (1079), Expect = e-117
Identities = 211/249 (84%), Positives = 211/249 (84%), Gaps = 1/249 (0%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXX-RTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGS 556
RTQKEKKAARARSKGKNSDEEAPKA QKK SPEYGMPSVTFGS
Sbjct: 121 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKATQKK------SPEYGMPSVTFGS 174
Query: 557 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 736
VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
Sbjct: 175 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 234
Query: 737 RCSQERKKK 763
RCSQERKKK
Sbjct: 235 RCSQERKKK 243
>ref|XP_534907.2| PREDICTED: similar to inhibitor of growth family, member 4 isoform
1 [Canis familiaris].
Length = 236
Score = 414 bits (1065), Expect = e-116
Identities = 205/236 (86%), Positives = 205/236 (86%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
RTQKEKKAARARSKGKNSDEEAPKA QKKLKLVRTSPEYGMPSVTFGSV
Sbjct: 121 YDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKATQKKLKLVRTSPEYGMPSVTFGSV 180
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKW 727
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKW
Sbjct: 181 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKW 236
>ref|XP_854098.1| PREDICTED: similar to inhibitor of growth family, member 4 [Canis
familiaris].
Length = 305
Score = 402 bits (1033), Expect = e-112
Identities = 204/261 (78%), Positives = 209/261 (80%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFEL RNFQL+R LDQR E KAEIDKLAT+YM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELHRNFQLVRHLDQRAEGRKAEIDKLATKYMSSNRSRSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKH RLDTDLA FEADLKE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHTWRLDTDLAHFEADLKENSSSKGK 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
TQKEKKAARARSKGKNSDEEAPKA QKKLKLVRTSPE GMPSVTFGSV
Sbjct: 121 KKGG--------TQKEKKAARARSKGKNSDEEAPKATQKKLKLVRTSPECGMPSVTFGSV 172
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYG+MIGCDNPDCSIEWFHFACVGLTTKP GKWFCPR
Sbjct: 173 HPSDVLDMPVDPNEPTYCLCHQVSYGKMIGCDNPDCSIEWFHFACVGLTTKPWGKWFCPR 232
Query: 740 CSQERKKK*TRALDSNSFFHI 802
CSQ +KK ALDS+ FFHI
Sbjct: 233 CSQGKKKS-RGALDSHDFFHI 252
>ref|XP_867714.1| PREDICTED: similar to Inhibitor of growth protein 4 isoform 8
[Canis familiaris].
Length = 237
Score = 389 bits (998), Expect = e-108
Identities = 196/245 (80%), Positives = 198/245 (80%), Gaps = 1/245 (0%)
Frame = +2
Query: 32 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXX 211
MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLAL 60
Query: 212 XXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXXXXXX 391
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 LKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSDYDSS 120
Query: 392 XXXXXXX-RTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSVHPS 568
RTQKEKKAARARSKGKNSDEEAPK + K P +TFGSVHPS
Sbjct: 121 SSKGKKKGRTQKEKKAARARSKGKNSDEEAPKKRRHK--------SLAPPGLTFGSVHPS 172
Query: 569 DVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ 748
DVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ
Sbjct: 173 DVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ 232
Query: 749 ERKKK 763
ERKKK
Sbjct: 233 ERKKK 237
>ref|XP_867723.1| PREDICTED: similar to inhibitor of growth family, member 4 isoform
9 [Canis familiaris].
Length = 224
Score = 379 bits (973), Expect = e-105
Identities = 192/248 (77%), Positives = 193/248 (77%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLD+ LKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDN------------------------LKAEIDKLATEYMSSARSLSSEE 36
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 37 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 96
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
RTQKEKKAARARSKGKNSDEEAPKA QKKLKLVRTSPEYGMPSVTFGSV
Sbjct: 97 YDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKATQKKLKLVRTSPEYGMPSVTFGSV 156
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR
Sbjct: 157 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 216
Query: 740 CSQERKKK 763
CSQERKKK
Sbjct: 217 CSQERKKK 224
>ref|XP_867659.1| PREDICTED: similar to inhibitor of growth family, member 4 isoform
3 [Canis familiaris].
Length = 242
Score = 365 bits (936), Expect = e-101
Identities = 184/215 (85%), Positives = 184/215 (85%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
RTQKEKKAARARSKGKNSDEEAPKA QKKLKLVRTSPEYGMPSVTFGSV
Sbjct: 121 YDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKATQKKLKLVRTSPEYGMPSVTFGSV 180
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPD 664
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPD
Sbjct: 181 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPD 215
>ref|XP_848604.1| PREDICTED: similar to inhibitor of growth family, member 5 isoform
1 [Canis familiaris].
Length = 227
Score = 295 bits (755), Expect = 5e-80
Identities = 152/236 (64%), Positives = 165/236 (69%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MA MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+
Sbjct: 1 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
+IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K
Sbjct: 61 RVEHLQKIQSAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
R QKEK+ +R R + + S+E+ PK + K T T SV
Sbjct: 121 ESSGGRGLKKGRAQKEKRGSRGRGR-RTSEEDTPKKKKHKGGSEFTD--------TILSV 171
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKW 727
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKW
Sbjct: 172 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKW 227
>ref|XP_856524.1| PREDICTED: similar to inhibitor of growth family, member 5 isoform
2 [Canis familiaris].
Length = 255
Score = 280 bits (716), Expect = 2e-75
Identities = 152/264 (57%), Positives = 165/264 (62%), Gaps = 28/264 (10%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MA MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+
Sbjct: 1 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
+IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K
Sbjct: 61 RVEHLQKIQSAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
R QKEK+ +R R + + S+E+ PK + K T T SV
Sbjct: 121 ESSGGRGLKKGRAQKEKRGSRGRGR-RTSEEDTPKKKKHKGGSEFTD--------TILSV 171
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPD------------------------- 664
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPD
Sbjct: 172 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDVSTAPAGTGWGVLPSTSVLTAALPS 231
Query: 665 ---CSIEWFHFACVGLTTKPRGKW 727
C IEWFHFACV LTTKP+GKW
Sbjct: 232 ALQCPIEWFHFACVDLTTKPKGKW 255
>ref|XP_867668.1| PREDICTED: similar to inhibitor of growth family, member 4 isoform
4 [Canis familiaris].
Length = 137
Score = 198 bits (503), Expect = 8e-51
Identities = 101/117 (86%), Positives = 101/117 (86%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE 370
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE 117
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 43,091,037
Number of extensions: 1357691
Number of successful extensions: 6247
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 6156
Number of HSP's successfully gapped: 20
Length of query: 329
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 226
Effective length of database: 15,440,896
Effective search space: 3489642496
Effective search space used: 3489642496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007946
(988 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003126591.2| PREDICTED: inhibitor of growth protein 4-lik... 244 5e-65
Alignment gi|XP_003133390.1| PREDICTED: inhibitor of growth protein 2-lik... 155 4e-38
Alignment gi|XP_003355645.1| PREDICTED: inhibitor of growth protein 4-lik... 146 2e-35
Alignment gi|XP_003360929.1| PREDICTED: inhibitor of growth protein 1-lik... 133 2e-31
Alignment gi|XP_003134787.1| PREDICTED: inhibitor of growth protein 3 iso... 109 2e-24
Alignment gi|XP_003360198.1| PREDICTED: inhibitor of growth protein 3 iso... 54 1e-07
Alignment gi|XP_003360197.1| PREDICTED: inhibitor of growth protein 3 iso... 54 1e-07
Alignment gi|XP_003357819.1| PREDICTED: transcription initiation factor T... 50 3e-06
>ref|XP_003126591.2| PREDICTED: inhibitor of growth protein 4-like [Sus scrofa].
Length = 308
Score = 244 bits (623), Expect = 5e-65
Identities = 134/174 (77%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
+A G E SIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 44 LAGGAGGEKAPRSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 103
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE-XX 376
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 104 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 163
Query: 377 XXXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMP 538
RTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMP
Sbjct: 164 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMP 217
>ref|XP_003133390.1| PREDICTED: inhibitor of growth protein 2-like [Sus scrofa].
Length = 280
Score = 155 bits (391), Expect = 4e-38
Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 10/252 (3%)
Frame = +2
Query: 35 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXX 214
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y
Sbjct: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKEDDSNQKKRLQQ-- 84
Query: 215 XQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT------DLARFEADLKEKQIEXX 376
+Q A +E GD+K+Q+ Q E+V+ R+++ D A E + +++
Sbjct: 85 -HLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143
Query: 377 XXXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQ----KKLKLVRTSPEYGMPSV 544
RT + + + ++ D++ PK + KK K + E V
Sbjct: 144 QPERSSRRPRRQRTSESRDLCHMTNGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 203
Query: 545 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 724
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 204 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 252
Query: 725 WFCPRCSQERKK 760
W+CP+C + +K
Sbjct: 253 WYCPKCRGDNEK 264
>ref|XP_003355645.1| PREDICTED: inhibitor of growth protein 4-like [Sus scrofa].
Length = 61
Score = 146 bits (368), Expect = 2e-35
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2
Query: 581 MPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKK 760
MPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKK
Sbjct: 1 MPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKK 60
Query: 761 K 763
K
Sbjct: 61 K 61
>ref|XP_003360929.1| PREDICTED: inhibitor of growth protein 1-like, partial [Sus
scrofa].
Length = 254
Score = 133 bits (334), Expect = 2e-31
Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Frame = +2
Query: 83 QRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXXXQIQEAYGKCKEFGDD 262
++ Q++++LD+ E K E D + IQ A + +E GD+
Sbjct: 18 EQRTQILKELDEYYEKFKREADSAQKRRVLHC--------------IQRALIRSQELGDE 63
Query: 263 KVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXXXXXXXXXXXXXRTQKEK---K 433
K+Q+ Q E+V+ R++D+ + FEA + TQ EK K
Sbjct: 64 KIQIVSQMVELVENRTRQVDSHVELFEAHQEVSDTTGHSKAGQDKSKNETITQPEKPNNK 123
Query: 434 AARARSKGKNSD-----------------EEAPKAAQKKLKLVRTSPEYGMPSVTFGSVH 562
+R + +N + E+ KA++KK + + P+
Sbjct: 124 RSRRQRNNENRENAANNHDHDDVTSGTPKEKKAKASKKKKRSKAKAEREASPA------- 176
Query: 563 PSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRC 742
D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL+ KP+GKW
Sbjct: 177 -----DLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLSHKPKGKWXXXXX 231
Query: 743 SQERKKK*TRALDSN 787
E +K +AL+ +
Sbjct: 232 XXENEKTMDKALEKS 246
>ref|XP_003134787.1| PREDICTED: inhibitor of growth protein 3 isoform 1 [Sus scrofa].
Length = 418
Score = 109 bits (273), Expect = 2e-24
Identities = 41/66 (62%), Positives = 53/66 (80%)
Frame = +2
Query: 575 LDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQER 754
+D DPNEP YC+C+QVSYGEM+GCDN DC IEWFH+ CVGLT P+GKW+CP+C+
Sbjct: 351 VDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAM 410
Query: 755 KKK*TR 772
K++ +R
Sbjct: 411 KRRGSR 416
Score = 78.2 bits (191), Expect = 7e-15
Identities = 37/108 (34%), Positives = 65/108 (60%)
Frame = +2
Query: 32 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXX 211
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+
Sbjct: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
Query: 212 XXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLK 355
I++ Y K E D+KVQLA Q Y++VD+H+R+LD +LA+F+ +L+
Sbjct: 62 MASIKKDYYKALEDADEKVQLANQIYDLVDRHLRKLDQELAKFKMELE 109
>ref|XP_003360198.1| PREDICTED: inhibitor of growth protein 3 isoform 3 [Sus scrofa].
Length = 92
Score = 53.9 bits (128), Expect = 1e-07
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = +2
Query: 32 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXX 211
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+
Sbjct: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
Query: 212 XXQIQEAYGKCKEFGDDKVQLAMQTYEM 295
I++ Y K E D+KVQLA Q Y++
Sbjct: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89
>ref|XP_003360197.1| PREDICTED: inhibitor of growth protein 3 isoform 2 [Sus scrofa].
Length = 93
Score = 53.9 bits (128), Expect = 1e-07
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = +2
Query: 32 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXX 211
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+
Sbjct: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
Query: 212 XXQIQEAYGKCKEFGDDKVQLAMQTYEM 295
I++ Y K E D+KVQLA Q Y++
Sbjct: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89
>ref|XP_003357819.1| PREDICTED: transcription initiation factor TFIID subunit 3-like [Sus
scrofa].
Length = 1130
Score = 49.7 bits (117), Expect = 3e-06
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +2
Query: 641 MIGCDNPDCSIEWFHFACVGLTTKP--RGKWFCPRCSQERKKK 763
MIGCD D +W+H+ CVG+T P +WFCP+C ++K+K
Sbjct: 1081 MIGCDGCD---DWYHWPCVGITAAPPEEMQWFCPKCPNKKKEK 1120
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,669,142
Number of extensions: 852699
Number of successful extensions: 3778
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 3750
Number of HSP's successfully gapped: 9
Length of query: 329
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 230
Effective length of database: 8,879,129
Effective search space: 2042199670
Effective search space used: 2042199670
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007946
(988 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_579923.1| inhibitor of growth protein 4 [Mus musculus]. 443 e-124
Alignment gi|NP_079730.1| inhibitor of growth protein 5 [Mus musculus]. 317 1e-86
Alignment gi|NP_036049.2| inhibitor of growth protein 1 [Mus musculus]. 175 6e-44
Alignment gi|NP_075992.2| inhibitor of growth protein 2 [Mus musculus]. 154 8e-38
Alignment gi|NP_076115.3| inhibitor of growth protein 3 [Mus musculus]. 113 3e-25
>ref|NP_579923.1| inhibitor of growth protein 4 [Mus musculus].
Length = 248
Score = 443 bits (1139), Expect = e-124
Identities = 218/248 (87%), Positives = 218/248 (87%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLRQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
RTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV
Sbjct: 121 YDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 180
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR
Sbjct: 181 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 240
Query: 740 CSQERKKK 763
CSQERKKK
Sbjct: 241 CSQERKKK 248
>ref|NP_079730.1| inhibitor of growth protein 5 [Mus musculus].
Length = 240
Score = 317 bits (811), Expect = 1e-86
Identities = 159/248 (64%), Positives = 181/248 (72%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MA MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+
Sbjct: 1 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSSAQ 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
+IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK++
Sbjct: 61 RVEHLQKIQSAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDRMDGSDF 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
R+QKEK+++R R + + S+E+ PK + K + E+ + + SV
Sbjct: 121 ESTGARSLKKGRSQKEKRSSRGRGR-RTSEEDTPKKKKHK-----SGSEF---TDSILSV 171
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKWFCPR
Sbjct: 172 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPR 231
Query: 740 CSQERKKK 763
C QE++KK
Sbjct: 232 CVQEKRKK 239
>ref|NP_036049.2| inhibitor of growth protein 1 [Mus musculus].
Length = 279
Score = 175 bits (443), Expect = 6e-44
Identities = 92/262 (35%), Positives = 142/262 (54%), Gaps = 11/262 (4%)
Frame = +2
Query: 35 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXX 214
Y+E YLDSIE+LPF+LQRN LMR++D + +++ E+D ++
Sbjct: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDDYYEKFKRETDGTQKRRVLHC- 73
Query: 215 XQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEA--DLKE---------K 361
IQ A + +E GD+K+Q+ Q E+V+ R++D+ + FEA D+ + +
Sbjct: 74 --IQRALIRSQELGDEKIQIVSQMVELVENRSRQVDSHVELFEAHQDISDGTGGSGKAGQ 131
Query: 362 QIEXXXXXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPS 541
R+++++ + N D + + K K +TS +
Sbjct: 132 DKSKSEAITQADKPNNKRSRRQRNNENRENASNNHDHDDITSGTPKEKKAKTSKKKKRSK 191
Query: 542 VTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRG 721
+ + D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL KP+G
Sbjct: 192 AK--AEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG 249
Query: 722 KWFCPRCSQERKKK*TRALDSN 787
KW+CP+C E +K +AL+ +
Sbjct: 250 KWYCPKCRGESEKTMDKALEKS 271
>ref|NP_075992.2| inhibitor of growth protein 2 [Mus musculus].
Length = 281
Score = 154 bits (390), Expect = 8e-38
Identities = 83/252 (32%), Positives = 128/252 (50%), Gaps = 10/252 (3%)
Frame = +2
Query: 35 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXX 214
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y
Sbjct: 28 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKEDDSNQKKRLQQ-- 85
Query: 215 XQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT------DLARFEADLKEKQIEXX 376
+Q A +E GD+K+Q+ Q E+V+ R+++ D A E + +++
Sbjct: 86 -HLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKSKMDSS 144
Query: 377 XXXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQ----KKLKLVRTSPEYGMPSV 544
RT + + + + D++ PK + KK K + E V
Sbjct: 145 QPERSSRRPRRQRTSESRDLCHMTNGIDDCDDQPPKEKRSKSAKKKKRSKAKQEREASPV 204
Query: 545 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 724
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 205 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 253
Query: 725 WFCPRCSQERKK 760
W+CP+C + +K
Sbjct: 254 WYCPKCRGDNEK 265
>ref|NP_076115.3| inhibitor of growth protein 3 [Mus musculus].
Length = 421
Score = 113 bits (282), Expect = 3e-25
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Frame = +2
Query: 428 KKAARARSKGKNSDEEAPKAAQKKLKLVRTSP----EYGMPSVTFGSVHPSDVLDMPVDP 595
K +S + S + ++ L L +S E + + +D DP
Sbjct: 301 KSKNNTKSSSQQSSSSSSSSSSSSLSLCSSSSTVVQEVSQQATVVPESDSNSQVDWTYDP 360
Query: 596 NEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK*TR 772
NEP YC+C+QVSYGEM+GCDN DC IEWFH+ CVGLT P+GKWFCP+C+ K++ +R
Sbjct: 361 NEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWFCPQCTAAMKRRGSR 419
Score = 78.2 bits (191), Expect = 9e-15
Identities = 37/108 (34%), Positives = 65/108 (60%)
Frame = +2
Query: 32 MYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXX 211
+YLE YL+ IE LP +L+ F MR++D + ++ ++++ +E+
Sbjct: 2 LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61
Query: 212 XXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLK 355
I++ Y K E D+KVQLA Q Y++VD+H+R+LD +LA+F+ +L+
Sbjct: 62 MASIKKDYYKALEDADEKVQLANQIYDLVDRHLRKLDQELAKFKMELE 109
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,753,140
Number of extensions: 1105510
Number of successful extensions: 4714
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4673
Number of HSP's successfully gapped: 6
Length of query: 329
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 227
Effective length of database: 12,553,887
Effective search space: 2849732349
Effective search space used: 2849732349
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007946
(988 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_057246.2| inhibitor of growth protein 4 isoform 1 [Homo s... 441 e-124
Alignment gi|NP_001121056.1| inhibitor of growth protein 4 isoform 4 [Hom... 437 e-123
Alignment gi|NP_001121055.1| inhibitor of growth protein 4 isoform 3 [Hom... 437 e-123
Alignment gi|NP_001121054.1| inhibitor of growth protein 4 isoform 9 [Hom... 437 e-123
Alignment gi|NP_001121057.1| inhibitor of growth protein 4 isoform 5 [Hom... 374 e-104
Alignment gi|NP_115705.2| inhibitor of growth protein 5 [Homo sapiens]. 317 1e-86
Alignment gi|NP_001121058.1| inhibitor of growth protein 4 isoform 6 [Hom... 254 1e-67
Alignment gi|NP_937862.1| inhibitor of growth protein 1 isoform A [Homo s... 175 7e-44
Alignment gi|NP_001555.1| inhibitor of growth protein 2 [Homo sapiens]. 154 9e-38
Alignment gi|NP_005528.3| inhibitor of growth protein 1 isoform D [Homo s... 140 2e-33
>ref|NP_057246.2| inhibitor of growth protein 4 isoform 1 [Homo sapiens].
Length = 248
Score = 441 bits (1135), Expect = e-124
Identities = 217/248 (87%), Positives = 217/248 (87%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
RTQKEKKAARARSKGKNSDEEAPK AQKKLKLVRTSPEYGMPSVTFGSV
Sbjct: 121 YDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGSV 180
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR
Sbjct: 181 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 240
Query: 740 CSQERKKK 763
CSQERKKK
Sbjct: 241 CSQERKKK 248
>ref|NP_001121056.1| inhibitor of growth protein 4 isoform 4 [Homo sapiens].
Length = 245
Score = 437 bits (1124), Expect = e-123
Identities = 217/248 (87%), Positives = 217/248 (87%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
RTQKEKKAARARSKGKNSDEEAPK AQKKLKLVRTSPEYGMPSVTFGSV
Sbjct: 121 YDSSSSKG---RTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGSV 177
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR
Sbjct: 178 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 237
Query: 740 CSQERKKK 763
CSQERKKK
Sbjct: 238 CSQERKKK 245
>ref|NP_001121055.1| inhibitor of growth protein 4 isoform 3 [Homo sapiens].
Length = 246
Score = 437 bits (1124), Expect = e-123
Identities = 217/248 (87%), Positives = 217/248 (87%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
RTQKEKKAARARSKGKNSDEEAPK AQKKLKLVRTSPEYGMPSVTFGSV
Sbjct: 121 YDSSSSKEG--RTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGSV 178
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR
Sbjct: 179 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 238
Query: 740 CSQERKKK 763
CSQERKKK
Sbjct: 239 CSQERKKK 246
>ref|NP_001121054.1| inhibitor of growth protein 4 isoform 9 [Homo sapiens].
Length = 249
Score = 437 bits (1123), Expect = e-123
Identities = 217/249 (87%), Positives = 217/249 (87%), Gaps = 1/249 (0%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 380 XXXXXXXXXXX-RTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGS 556
RTQKEKKAARARSKGKNSDEEAPK AQKKLKLVRTSPEYGMPSVTFGS
Sbjct: 121 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS 180
Query: 557 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 736
VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
Sbjct: 181 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 240
Query: 737 RCSQERKKK 763
RCSQERKKK
Sbjct: 241 RCSQERKKK 249
>ref|NP_001121057.1| inhibitor of growth protein 4 isoform 5 [Homo sapiens].
Length = 225
Score = 374 bits (961), Expect = e-104
Identities = 192/249 (77%), Positives = 193/249 (77%), Gaps = 1/249 (0%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLD+ LKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDN------------------------LKAEIDKLATEYMSSARSLSSEE 36
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 37 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 96
Query: 380 XXXXXXXXXXX-RTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGS 556
RTQKEKKAARARSKGKNSDEEAPK AQKKLKLVRTSPEYGMPSVTFGS
Sbjct: 97 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS 156
Query: 557 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 736
VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP
Sbjct: 157 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 216
Query: 737 RCSQERKKK 763
RCSQERKKK
Sbjct: 217 RCSQERKKK 225
>ref|NP_115705.2| inhibitor of growth protein 5 [Homo sapiens].
Length = 240
Score = 317 bits (811), Expect = 1e-86
Identities = 161/248 (64%), Positives = 176/248 (70%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MA MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+
Sbjct: 1 MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXX 379
+IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K
Sbjct: 61 RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF 120
Query: 380 XXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYGMPSVTFGSV 559
R QKEK+ +R R + + S+E+ PK + K T T SV
Sbjct: 121 ESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPKKKKHKGGSEFTD--------TILSV 171
Query: 560 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPR 739
HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKWFCPR
Sbjct: 172 HPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPR 231
Query: 740 CSQERKKK 763
C QE++KK
Sbjct: 232 CVQEKRKK 239
>ref|NP_001121058.1| inhibitor of growth protein 4 isoform 6 [Homo sapiens].
Length = 179
Score = 254 bits (648), Expect = 1e-67
Identities = 137/172 (79%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Frame = +2
Query: 20 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXX 199
MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYM
Sbjct: 1 MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60
Query: 200 XXXXXXQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE-XX 376
QIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIE
Sbjct: 61 KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120
Query: 377 XXXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPEYG 532
RTQKEKKAARARSKGKNSDEEAPK AQKKLKLVRT P G
Sbjct: 121 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTVPLSG 172
>ref|NP_937862.1| inhibitor of growth protein 1 isoform A [Homo sapiens].
Length = 279
Score = 175 bits (443), Expect = 7e-44
Identities = 93/262 (35%), Positives = 139/262 (53%), Gaps = 11/262 (4%)
Frame = +2
Query: 35 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXX 214
Y+E YLDSIE+LPF+LQRN LMR++D + +++ E+D+ Y
Sbjct: 15 YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEC---YERFSRETDGAQKRRML 71
Query: 215 XQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXXXXXXX 394
+Q A + +E GD+K+Q+ Q E+V+ R++D+ + FEA +
Sbjct: 72 HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGA 131
Query: 395 XXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQK-----------KLKLVRTSPEYGMPS 541
+ K RS+ + ++E A+ K K +TS +
Sbjct: 132 DRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSK 191
Query: 542 VTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRG 721
+ + D+P+DPNEPTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL KP+G
Sbjct: 192 AK--AEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG 249
Query: 722 KWFCPRCSQERKKK*TRALDSN 787
KW+CP+C E +K +AL+ +
Sbjct: 250 KWYCPKCRGENEKTMDKALEKS 271
>ref|NP_001555.1| inhibitor of growth protein 2 [Homo sapiens].
Length = 280
Score = 154 bits (390), Expect = 9e-38
Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 10/252 (3%)
Frame = +2
Query: 35 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXX 214
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y
Sbjct: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKEDDLNQKKRLQQL- 85
Query: 215 XQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT------DLARFEADLKEKQIEXX 376
+Q A +E GD+K+Q+ Q E+V+ R+++ D A E + +++
Sbjct: 86 --LQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143
Query: 377 XXXXXXXXXXXXRTQKEKKAARARSKGKNSDEEAPKAAQ----KKLKLVRTSPEYGMPSV 544
RT + + + ++ D++ PK + KK K + E V
Sbjct: 144 QPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 203
Query: 545 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 724
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 204 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 252
Query: 725 WFCPRCSQERKK 760
W+CP+C + +K
Sbjct: 253 WYCPKCRGDNEK 264
>ref|NP_005528.3| inhibitor of growth protein 1 isoform D [Homo sapiens].
Length = 422
Score = 140 bits (353), Expect = 2e-33
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 11/242 (4%)
Frame = +2
Query: 95 QLMRDLDQRTEDLKAEIDKLATEYMXXXXXXXXXXXXXXXXQIQEAYGKCKEFGDDKVQL 274
Q++++LD+ E E D M +Q A + +E GD+K+Q+
Sbjct: 189 QILKELDECYERFSRETDGAQKRRMLHC--------------VQRALIRSQELGDEKIQI 234
Query: 275 AMQTYEMVDKHIRRLDTDLARFEADLKEKQIEXXXXXXXXXXXXXXRTQKEKKAARARSK 454
Q E+V+ R++D+ + FEA + + K RS+
Sbjct: 235 VSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSR 294
Query: 455 GKNSDEEAPKAAQK-----------KLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNE 601
+ ++E A+ K K +TS + + + D+P+DPNE
Sbjct: 295 RQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAK--AEREASPADLPIDPNE 352
Query: 602 PTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK*TRALD 781
PTYCLC+QVSYGEMIGCDN +C IEWFHF+CVGL KP+GKW+CP+C E +K +AL+
Sbjct: 353 PTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALE 412
Query: 782 SN 787
+
Sbjct: 413 KS 414
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,314,557
Number of extensions: 1336482
Number of successful extensions: 5960
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 5888
Number of HSP's successfully gapped: 16
Length of query: 329
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 226
Effective length of database: 14,901,872
Effective search space: 3367823072
Effective search space used: 3367823072
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007946
(988 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 476 e-131
gb|GL893088.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 64 2e-07
>Sscrofa_Chr05
|| Length = 111506441
Score = 476 bits (240), Expect = e-131
Identities = 259/264 (98%), Gaps = 1/264 (0%)
Strand = Plus / Minus
Query: 726 ggttttgtccacgctgctcccaagaacggaagaagaaatagacgagggccttggattcca 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66542566 ggttttgtccacgctgctcccaagaacggaagaagaaatagacgagggccttggattcca 66542507
Query: 786 acagtttcttccacatcccctgacctgggctaatggggagagggatgcctggctggggcc 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66542506 acagtttcttccacatcccctgacctgggctaatggggagagggatgcctggctggggcc 66542447
Query: 846 gggggtcagggagaagtggatggagcagtgtcgtcatccctcctcct-ccctccccaatc 904
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 66542446 gggggtcagggagaagtggatggagcagtgtcgtcatccctcctcctcccctccccactc 66542387
Query: 905 ctggtgctgaggctgcacccaaaccctggcagggaggggtgccgcagccaggtacggtat 964
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 66542386 ctggtgctgaggctgcacccagaccctggcagggaggggtgccgcagccagtaacggtat 66542327
Query: 965 gtgctctcattcagcccaccccct 988
||||||||||||||||||||||||
Sbjct: 66542326 gtgctctcattcagcccaccccct 66542303
Score = 337 bits (170), Expect = 7e-90
Identities = 170/170 (100%)
Strand = Plus / Minus
Query: 128 gacctgaaggctgaaattgacaagttggccacagagtatatgagtagcgcccgcagcctg 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66543976 gacctgaaggctgaaattgacaagttggccacagagtatatgagtagcgcccgcagcctg 66543917
Query: 188 agctccgaggaaaaactggcccttctcaaacagatccaggaggcctatggcaagtgcaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66543916 agctccgaggaaaaactggcccttctcaaacagatccaggaggcctatggcaagtgcaag 66543857
Query: 248 gaatttggtgacgacaaggtgcagcttgccatgcagacctatgaaatggt 297
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66543856 gaatttggtgacgacaaggtgcagcttgccatgcagacctatgaaatggt 66543807
Score = 250 bits (126), Expect = 1e-63
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 539 tcagtgacctttggcagtgtccacccctctgatgtgttggatatgcctgtggatcccaac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66543123 tcagtgacctttggcagtgtccacccctctgatgtgttggatatgcctgtggatcccaac 66543064
Query: 599 gaacccacctattgcctttgtcaccaggtctcctatggagagatgattggctgtgacaac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66543063 gaacccacctattgcctttgtcaccaggtctcctatggagagatgattggctgtgacaac 66543004
Query: 659 cctgat 664
||||||
Sbjct: 66543003 cctgat 66542998
Score = 232 bits (117), Expect = 3e-58
Identities = 117/117 (100%)
Strand = Plus / Minus
Query: 295 ggtggacaaacacattcgtcgtctggacacagacctggcccgttttgaggctgatctgaa 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66543626 ggtggacaaacacattcgtcgtctggacacagacctggcccgttttgaggctgatctgaa 66543567
Query: 355 agagaaacagattgagtcaagtgactacgacagctcttccagcaaaggcaaaaagag 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66543566 agagaaacagattgagtcaagtgactacgacagctcttccagcaaaggcaaaaagag 66543510
Score = 202 bits (102), Expect = 3e-49
Identities = 105/106 (99%)
Strand = Plus / Minus
Query: 411 gccggacccaaaaggagaagaaagctgcccgtgctcgttccaaagggaaaaactccgacg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66543340 gccggacccaaaaggagaagaaagctgcccgtgctcgttccaaagggaaaaactctgacg 66543281
Query: 471 aagaagcccccaaggctgcccagaagaagttaaaactcgtgcgcac 516
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66543280 aagaagcccccaaggctgcccagaagaagttaaaactcgtgcgcac 66543235
Score = 143 bits (72), Expect = 2e-31
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 57 gtattgaaaacctgccctttgaactgcagagaaacttccagctcatgagggacctggacc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66546214 gtattgaaaacctgccctttgaactgcagagaaacttccagctcatgagggacctggacc 66546155
Query: 117 aaagaacagagg 128
||||||||||||
Sbjct: 66546154 aaagaacagagg 66546143
Score = 127 bits (64), Expect = 1e-26
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 665 tgttccattgagtggttccactttgcctgtgttgggctgactaccaagcctcgggggaag 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66542730 tgttccattgagtggttccactttgcctgtgttgggctgactaccaagcctcgggggaag 66542671
Query: 725 tggt 728
||||
Sbjct: 66542670 tggt 66542667
Score = 63.9 bits (32), Expect = 2e-07
Identities = 39/40 (97%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 2 gctttgttttgcttcaagatggctgcg-gggatgtatttg 40
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 66579900 gctttgttttgcttcaagatggctgcgngggatgtatttg 66579939
>gb|GL893088.1| Sus scrofa unplaced genomic scaffold chrU_scaffold1889
Length = 88322
Score = 63.9 bits (32), Expect = 2e-07
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 593 cccaacgaacccacctattgcctttgtcaccaggtctcctatggagagatgattggctgt 652
|||||||| ||||| || || ||||| | ||||||||||||||||||||||| |||||
Sbjct: 3139 cccaacgagcccacgtactgtctttgcaatcaggtctcctatggagagatgatcggctgc 3198
Query: 653 gacaaccctgattgttccattgagtggttccactttgcctgtgttgggctga 704
|||||| || || |||| |||||||||||||| |||| || |||||||
Sbjct: 3199 gacaacgacgagtgccccatcgagtggttccacttctcctgcgtggggctga 3250
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,874,129
Number of extensions: 280
Number of successful extensions: 280
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 279
Number of HSP's successfully gapped: 9
Length of query: 988
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 967
Effective length of database: 2,808,413,156
Effective search space: 2715735521852
Effective search space used: 2715735521852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)