Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007964
(1008 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071376.1| cytochrome P450, family 4, subfamily A, poly... 449 e-126
Alignment gi|NP_001092460.1| cytochrome P450, family 4, subfamily A, poly... 442 e-124
Alignment gi|NP_001069670.1| cytochrome P450 4B1 [Bos taurus]. 263 2e-70
Alignment gi|XP_002688601.1| PREDICTED: cytochrome P450, family 4, subfam... 199 3e-51
Alignment gi|XP_586481.3| PREDICTED: cytochrome P450, family 4, subfamily... 199 3e-51
Alignment gi|NP_001039856.1| leukotriene-B(4) omega-hydroxylase 2 [Bos ta... 193 2e-49
Alignment gi|XP_002688602.1| PREDICTED: cytochrome P450, family 4, subfam... 193 2e-49
Alignment gi|XP_002704774.1| PREDICTED: cytochrome P450, family 4, subfam... 193 2e-49
Alignment gi|NP_001030214.1| cytochrome P450, family 4, subfamily F, poly... 192 4e-49
Alignment gi|NP_001068790.1| cytochrome P450, family 4, subfamily F, poly... 184 1e-46
>ref|NP_001071376.1| cytochrome P450, family 4, subfamily A, polypeptide 11 [Bos taurus].
Length = 514
Score = 449 bits (1156), Expect = e-126
Identities = 214/292 (73%), Positives = 245/292 (83%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQWLLKAL FPSPPSHW YGH REFQEE EL LLKRVEKYP AC RW+WGTRA++
Sbjct: 38 YLRRQWLLKALHHFPSPPSHWFYGHKREFQEEGELPHLLKRVEKYPRACVRWMWGTRALL 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
LVYDPDYMK+VL RSDPK +++R + PWIG GLLLL GQTWFQ RRMLTPAFHYDILKP
Sbjct: 98 LVYDPDYMKMVLGRSDPKAQIIHRFVKPWIGTGLLLLEGQTWFQHRRMLTPAFHYDILKP 157
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVG+MA SV+VMLDKWE+LV+QD LEI G VSLMTLDTIMKCAFS QGSVQTD +S SY
Sbjct: 158 YVGIMADSVRVMLDKWEELVSQDSHLEIFGHVSLMTLDTIMKCAFSQQGSVQTDRNSQSY 217
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI D+ +L +R ++AF QND+IYRL+PE H NHRA ++AHQHTD VI+ RK +LQK+
Sbjct: 218 IQAIKDVSHLIISRLRNAFHQNDLIYRLTPEGHWNHRACQLAHQHTDAVIKERKVRLQKE 277
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++E VR +RHLDFL+ILL A+ME G+SLSD DL EVDTFMFE H TASG
Sbjct: 278 GELEKVRSRRHLDFLDILLFARMENGSSLSDEDLRAEVDTFMFEGHDTTASG 329
>ref|NP_001092460.1| cytochrome P450, family 4, subfamily A, polypeptide 22 [Bos taurus].
Length = 515
Score = 442 bits (1136), Expect = e-124
Identities = 214/292 (73%), Positives = 240/292 (82%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQWLLKAL QFPSPPSHW YGH +EFQ+ESEL PLL+RVEKYP AC RWLWGT+A+V
Sbjct: 38 YLRRQWLLKALHQFPSPPSHWFYGHKKEFQKESELPPLLERVEKYPKACVRWLWGTKALV 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
LVYDPDYMKV L RSDPK Y+ L PWIG GLLLL GQ WFQ RRMLTPAF YDILK
Sbjct: 98 LVYDPDYMKVFLGRSDPKPHRTYKYLAPWIGTGLLLLEGQKWFQHRRMLTPAFRYDILKA 157
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVG+MA SV+VMLDKWE+LV+QD LEI G VSLMTLDTIMKCAFSHQGSVQ D S SY
Sbjct: 158 YVGIMADSVRVMLDKWEELVSQDSHLEIFGHVSLMTLDTIMKCAFSHQGSVQMDRSSQSY 217
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI DL +L +R ++AF QND+IYRL+PE NHRA ++ HQHTD VI+ RKA LQK+
Sbjct: 218 IQAIRDLSHLIVSRLRNAFHQNDLIYRLTPEGRWNHRACQLTHQHTDAVIKERKAHLQKE 277
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++E VR +RHLDFL+ILLLA+ME G+SLSD DL EVDTFMFE H TASG
Sbjct: 278 GELEKVRSRRHLDFLDILLLARMENGSSLSDEDLRAEVDTFMFEGHDTTASG 329
>ref|NP_001069670.1| cytochrome P450 4B1 [Bos taurus].
Length = 511
Score = 263 bits (672), Expect = 2e-70
Identities = 133/290 (45%), Positives = 178/290 (61%)
Frame = +2
Query: 134 LRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVL 313
LRRQ L +A+ +F PP+HWL+GH+ E Q+ L ++ ++P A W+ +
Sbjct: 34 LRRQMLARAMDRFSGPPTHWLFGHALEIQQTGSLDKVVSWTHEFPYAHQLWVGQFLGFLN 93
Query: 314 VYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPY 493
+YDPDY K V +R DPK Y + WIG GLL+L G WFQ R++LTP FHYD+LKPY
Sbjct: 94 IYDPDYAKAVYSRGDPKAPDFYDFFLQWIGKGLLVLQGPKWFQHRKLLTPGFHYDVLKPY 153
Query: 494 VGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYI 673
V L A+S +VMLDKWE+ + +I V M LD++MKC F S D D++ Y+
Sbjct: 154 VALFAESTRVMLDKWEKKAREQKSFDIYSDVGHMALDSLMKCTFGKGTSGLNDRDNNYYL 213
Query: 674 QAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQG 853
++ +L L R S ND IY L+P + RA ++AH HTD+VI+ RKA LQ +
Sbjct: 214 -SVKELTLLMQQRIDSFQYHNDFIYFLTPHGRRFLRACQVAHDHTDQVIRERKAALQDEK 272
Query: 854 KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTAS 1003
+ E ++ KRHLDFL+ILL A E+G LSD DL EVDTFMFE H T S
Sbjct: 273 ERERIQSKRHLDFLDILLGAWDEEGIKLSDEDLRAEVDTFMFEGHDTTTS 322
>ref|XP_002688601.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like
[Bos taurus].
Length = 523
Score = 199 bits (506), Expect = 3e-51
Identities = 113/291 (38%), Positives = 165/291 (56%), Gaps = 9/291 (3%)
Frame = +2
Query: 161 LQQFPSPPS-HWLYGHSREFQE-ESELQPLLKRVEKYPSACARWLWGTRAMVLVYDPDYM 334
LQ FP PP +W GH ++ E L+ + V YP L +++ PD +
Sbjct: 48 LQCFPQPPKRNWFLGHMGQYPPTEKGLRDFTQLVANYPQGFRICLGPAIPIIIFCHPDMI 107
Query: 335 KVVL---ARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLM 505
++V A + PK + Y L PW+G GLLL G W + RRMLTPAFH++ILKPY+ +
Sbjct: 108 RIVANASAAAAPKDVIFYDFLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIF 167
Query: 506 AKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAI 682
KS +M KW++L+ + L++ +SLMTLD++ KC FS+ + Q + YI +I
Sbjct: 168 TKSADIMHAKWQRLITEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQE--KPNEYIASI 225
Query: 683 WDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGKME 862
+L L + R + FL D +Y L+P+ + RA R+ H TD VIQ R+ L +G +
Sbjct: 226 LELSALVAKRNQQIFLHMDFLYFLTPDWRRFRRACRLVHDFTDAVIQERRHTLPSEGTDD 285
Query: 863 NVR---KKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K + LDF+++LLL + E G LSD D+ E DTFMFE H TASG
Sbjct: 286 FLKAKVKTKTLDFIDVLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASG 336
>ref|XP_586481.3| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like
[Bos taurus].
Length = 523
Score = 199 bits (506), Expect = 3e-51
Identities = 113/291 (38%), Positives = 165/291 (56%), Gaps = 9/291 (3%)
Frame = +2
Query: 161 LQQFPSPPS-HWLYGHSREFQE-ESELQPLLKRVEKYPSACARWLWGTRAMVLVYDPDYM 334
LQ FP PP +W GH ++ E L+ + V YP L +++ PD +
Sbjct: 48 LQCFPQPPKRNWFLGHMGQYPPTEKGLRDFTQLVANYPQGFRICLGPAIPIIIFCHPDMI 107
Query: 335 KVVL---ARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLM 505
++V A + PK + Y L PW+G GLLL G W + RRMLTPAFH++ILKPY+ +
Sbjct: 108 RIVANASAAAAPKDVIFYDFLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIF 167
Query: 506 AKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAI 682
KS +M KW++L+ + L++ +SLMTLD++ KC FS+ + Q + YI +I
Sbjct: 168 TKSADIMHAKWQRLITEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQE--KPNEYIASI 225
Query: 683 WDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGKME 862
+L L + R + FL D +Y L+P+ + RA R+ H TD VIQ R+ L +G +
Sbjct: 226 LELSALVAKRNQQIFLHMDFLYFLTPDWRRFRRACRLVHDFTDAVIQERRHTLPSEGTDD 285
Query: 863 NVR---KKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K + LDF+++LLL + E G LSD D+ E DTFMFE H TASG
Sbjct: 286 FLKAKVKTKTLDFIDVLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASG 336
>ref|NP_001039856.1| leukotriene-B(4) omega-hydroxylase 2 [Bos taurus].
Length = 522
Score = 193 bits (491), Expect = 2e-49
Identities = 114/291 (39%), Positives = 159/291 (54%), Gaps = 9/291 (3%)
Frame = +2
Query: 161 LQQFPSPPSH-WLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVL-VYDPDYM 334
L+ FP PP W +GH Q E L++ + Y W G +L + P+++
Sbjct: 48 LRCFPQPPKRSWFWGHLGLAQSNEESMRLVEELGHYFRDVHLWWMGPFFPILRLVHPNFV 107
Query: 335 KVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLM 505
+L S PK Y L PW+G GLLL G W RR+LTPAFH++ILKPY+ +
Sbjct: 108 APLLQASATIIPKDMFFYSFLKPWLGDGLLLSAGDKWSSHRRLLTPAFHFEILKPYMKIF 167
Query: 506 AKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAI 682
KS +M KW++L + RL++ +SLMTLD++ KC FS+ + Q YI AI
Sbjct: 168 NKSADIMHAKWQRLALEGSTRLDMFEHISLMTLDSLQKCVFSYDSNCQE--KPSEYIAAI 225
Query: 683 WDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGKME 862
+L L R K FL D +Y L+ + + +RA R+ H TD +IQ R+ L QG E
Sbjct: 226 LELSALVMKRIKHIFLHVDFLYYLTRDGQRFYRACRLVHDFTDAIIQKRRRTLISQGSQE 285
Query: 863 NVR---KKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K + LDF+++LLLA+ E G L D D+ E DTFMFE H TASG
Sbjct: 286 FLKTKTKAKTLDFIDVLLLAKDEDGKGLPDEDIRAEADTFMFEGHDTTASG 336
>ref|XP_002688602.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like
[Bos taurus].
Length = 524
Score = 193 bits (491), Expect = 2e-49
Identities = 113/291 (38%), Positives = 158/291 (54%), Gaps = 9/291 (3%)
Frame = +2
Query: 161 LQQFPSPPS-HWLYGHSREFQE-ESELQPLLKRVEKYPSACARWLWGTRAMVLVYDPDYM 334
L+ FP PP +W GH E L + + V YP W+ +V+ PD +
Sbjct: 48 LRCFPQPPKRNWFLGHLGLVPPTEQGLSKVTQLVTNYPQGYLMWMGPIIPLVIFCHPDLI 107
Query: 335 KVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLM 505
+ + S PK V Y L PW+G GLLL G W RRMLTPAFH++ILKPY+ +
Sbjct: 108 RTFASASAAIAPKNVVFYNFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIF 167
Query: 506 AKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAI 682
KS +M KW++L+ + L++ +SLMTLD++ KC FS+ + Q YI AI
Sbjct: 168 TKSADIMHAKWQRLIIEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQE--KPSDYIAAI 225
Query: 683 WDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ---G 853
+L L + R + FL D +Y L+P+ + RA R+ H T VIQ R+ L K+
Sbjct: 226 LELSALVAKRYQQIFLHMDFLYYLTPDGWRFRRACRLVHDFTGAVIQERRRTLPKEDIDD 285
Query: 854 KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K + LDF+++LLL + E G LSD D+ E DTFMFE H TASG
Sbjct: 286 FLKAKEKTKTLDFIDVLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASG 336
>ref|XP_002704774.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like
[Bos taurus].
Length = 524
Score = 193 bits (491), Expect = 2e-49
Identities = 113/291 (38%), Positives = 158/291 (54%), Gaps = 9/291 (3%)
Frame = +2
Query: 161 LQQFPSPPS-HWLYGHSREFQE-ESELQPLLKRVEKYPSACARWLWGTRAMVLVYDPDYM 334
L+ FP PP +W GH E L + + V YP W+ +V+ PD +
Sbjct: 48 LRCFPQPPKRNWFLGHLGLVPPTEQGLSKVTQLVTNYPQGYLMWMGPIIPLVIFCHPDLI 107
Query: 335 KVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLM 505
+ + S PK V Y L PW+G GLLL G W RRMLTPAFH++ILKPY+ +
Sbjct: 108 RTFASASAAIAPKNVVFYNFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIF 167
Query: 506 AKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAI 682
KS +M KW++L+ + L++ +SLMTLD++ KC FS+ + Q YI AI
Sbjct: 168 TKSADIMHAKWQRLIIEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQE--KPSDYIAAI 225
Query: 683 WDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ---G 853
+L L + R + FL D +Y L+P+ + RA R+ H T VIQ R+ L K+
Sbjct: 226 LELSALVAKRYQQIFLHMDFLYYLTPDGWRFRRACRLVHDFTGAVIQERRRTLPKEDIDD 285
Query: 854 KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K + LDF+++LLL + E G LSD D+ E DTFMFE H TASG
Sbjct: 286 FLKAKEKTKTLDFIDVLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASG 336
>ref|NP_001030214.1| cytochrome P450, family 4, subfamily F, polypeptide 2 [Bos taurus].
Length = 524
Score = 192 bits (488), Expect = 4e-49
Identities = 112/293 (38%), Positives = 160/293 (54%), Gaps = 9/293 (3%)
Frame = +2
Query: 155 KALQQFPSPPS-HWLYGHSREFQE-ESELQPLLKRVEKYPSACARWLWGTRAMVLVYDPD 328
+ LQ FP PP +W GH E + L + V KY W+ +++ PD
Sbjct: 46 RRLQCFPQPPKRNWFLGHLGLVPPTEQGMSKLTELVAKYSQGFRIWMGPITPIIVFCHPD 105
Query: 329 YMKVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVG 499
+++V S PK + Y +L PW+G GLLL G W + RRMLTPAFH++ILKPY+
Sbjct: 106 LIRIVANASAAVAPKDVIFYEVLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMK 165
Query: 500 LMAKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQ 676
+ KS +M KW+ L+ + L++ +SLMTLD++ KC FS+ + Q YI
Sbjct: 166 IFTKSTDIMHAKWQHLIKEGHTHLDMFEHISLMTLDSLQKCIFSYDSNCQE--KPSEYIA 223
Query: 677 AIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGK 856
AI +L L + R + FL D +Y L+P+ + RA R+ H TD VIQ L +
Sbjct: 224 AILELSALVAKRHQEIFLHMDFLYYLTPDGRRFRRACRLVHDFTDAVIQEWHRTLPSESI 283
Query: 857 MENVR---KKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ ++ K + LDF+++LLL + E G LSD D+ E DTFMFE H TASG
Sbjct: 284 DDFLKAKAKTKTLDFIDVLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASG 336
>ref|NP_001068790.1| cytochrome P450, family 4, subfamily F, polypeptide 2 [Bos taurus].
Length = 523
Score = 184 bits (467), Expect = 1e-46
Identities = 111/293 (37%), Positives = 152/293 (51%), Gaps = 9/293 (3%)
Frame = +2
Query: 155 KALQQFPSPPS-HWLYGHSREFQE-ESELQPLLKRVEKYPSACARWLWGTRAMVLVYDPD 328
+ L+ F PP +W GH E L + YP W MV+ PD
Sbjct: 46 RRLRCFLQPPKPNWFLGHMNLVPSTEQGLIYFTQMAANYPRGYLIWFGPIIPMVIFCHPD 105
Query: 329 YMKVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVG 499
++ + S PK Y L PW+G GLLL G W RRMLTPAFH++ILKPY+
Sbjct: 106 MLRSITNASAAIAPKDMQFYGTLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYIK 165
Query: 500 LMAKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQ 676
+ KS ++M KWE L+ + L++ +SL+TLD + KC FS + Q YI
Sbjct: 166 IFTKSAEIMHAKWEHLITEGHTHLDMFEHISLLTLDNLQKCVFSFDSNCQE--KPSEYIA 223
Query: 677 AIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGK 856
AI +L L S R + FL D +Y L+ + + A R+ H TD VIQ R+ L K+
Sbjct: 224 AILELSALVSKRNQQLFLYMDFLYYLTSDGQRFRNACRLVHDFTDAVIQERRRTLPKENI 283
Query: 857 MENVR---KKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ ++ K + LDF+++LLL + E G LSD D+ E DTFMFE H TASG
Sbjct: 284 DDFLKAKAKTKTLDFIDVLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASG 336
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 39,465,922
Number of extensions: 1071760
Number of successful extensions: 4224
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 4190
Number of HSP's successfully gapped: 12
Length of query: 336
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 233
Effective length of database: 14,273,310
Effective search space: 3325681230
Effective search space used: 3325681230
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007964
(1008 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001041482.1| cytochrome P450 4A38 [Canis lupus familiaris]. 409 e-114
Alignment gi|NP_001041499.1| cytochrome P450, family 4, subfamily A, poly... 407 e-114
Alignment gi|NP_001041490.1| cytochrome P450 4A37 [Canis lupus familiaris]. 402 e-112
Alignment gi|XP_850244.1| PREDICTED: similar to cytochrome P450, family 4... 264 9e-71
Alignment gi|NP_001193862.1| cytochrome P450 4X1 [Canis lupus familiaris]. 246 2e-65
Alignment gi|XP_860991.1| PREDICTED: similar to cytochrome P450, family 4... 238 5e-63
Alignment gi|XP_541982.2| PREDICTED: similar to Cytochrome P450 4F3 (CYPI... 201 9e-52
Alignment gi|XP_541983.2| PREDICTED: similar to Cytochrome P450 4F6 (CYPI... 182 6e-46
Alignment gi|XP_541984.2| PREDICTED: similar to cytochrome P450, family 2... 178 8e-45
Alignment gi|XP_852938.1| PREDICTED: similar to cytochrome P450, family 4... 136 3e-32
>ref|NP_001041482.1| cytochrome P450 4A38 [Canis lupus familiaris].
Length = 510
Score = 409 bits (1050), Expect = e-114
Identities = 195/292 (66%), Positives = 230/292 (78%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
Y RQWLLKA+QQFPSPPSHW +GH +EFQ+ ELQ L KR EKYP A RWLWG+R +
Sbjct: 38 YWHRQWLLKAIQQFPSPPSHWFFGHRQEFQKGRELQELKKRTEKYPCASPRWLWGSRVSL 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
+VYDPDYM+++L RSDPK+ YRL+ PWIG GLLLLNG+ WFQ RRMLTPAFHYDILKP
Sbjct: 98 VVYDPDYMRMILGRSDPKSDGSYRLMAPWIGYGLLLLNGEIWFQHRRMLTPAFHYDILKP 157
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV LMA SVQVMLDKWE+L+ Q+ LEI VSLMTLDTIMKCAFS+QG+ Q D +S +Y
Sbjct: 158 YVRLMADSVQVMLDKWEELLTQNSHLEIFEHVSLMTLDTIMKCAFSYQGNHQADRNSQAY 217
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI DL NL R ++ F Q DI Y L+ E +NH+A ++AH+HTDRVI+LRKAQLQ +
Sbjct: 218 IQAIRDLNNLVFARVRNVFYQKDIFYGLTSEGRRNHKACQLAHEHTDRVIKLRKAQLQDE 277
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++E +R KRHLDFL+ILL A+ME G LSD DL EVDTFMFE H TASG
Sbjct: 278 GELEKIRNKRHLDFLDILLFAKMENGRGLSDKDLRAEVDTFMFEGHDTTASG 329
>ref|NP_001041499.1| cytochrome P450, family 4, subfamily A, polypeptide 11 [Canis lupus
familiaris].
Length = 510
Score = 407 bits (1046), Expect = e-114
Identities = 195/292 (66%), Positives = 232/292 (79%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
Y RRQWLLKA+QQFPSPPSHWL+GH RE Q+ ELQ LLK +E +P A +RW+WGT A +
Sbjct: 38 YQRRQWLLKAVQQFPSPPSHWLFGHKRELQKGDELQLLLKWIEDFPCAFSRWIWGTEAEI 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
++YDPDYMK++L RSDPK Y+L+ PWIG GLLLLNG+TW Q RRMLTPAFHYDILKP
Sbjct: 98 MIYDPDYMKLILGRSDPKPDGSYKLMAPWIGYGLLLLNGETWSQHRRMLTPAFHYDILKP 157
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV LMA SVQVMLDKWE+L++Q+ LEI VSLMTLDTIMKCAFS+QG+ Q D +S +Y
Sbjct: 158 YVRLMADSVQVMLDKWEELLSQNSHLEIFDHVSLMTLDTIMKCAFSYQGNHQADRNSQAY 217
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI DL NL R ++ F Q DI Y L+ E +NH+A ++AHQHTDRVI+LRKAQLQ +
Sbjct: 218 IQAIRDLNNLVFARMRNVFYQKDIFYGLTSEGRRNHKACQLAHQHTDRVIKLRKAQLQDK 277
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++E VR KRHLDFL+ILL A++E G LSD DL EVDTFMFE H TASG
Sbjct: 278 GELEKVRNKRHLDFLDILLFAKVENGRGLSDKDLRAEVDTFMFEGHDTTASG 329
>ref|NP_001041490.1| cytochrome P450 4A37 [Canis lupus familiaris].
Length = 510
Score = 402 bits (1032), Expect = e-112
Identities = 194/292 (66%), Positives = 225/292 (77%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
Y RRQWLLKA+QQFPSPPSHW +GH +EFQ ELQ K EKYP A RWLWG+R +
Sbjct: 38 YQRRQWLLKAVQQFPSPPSHWFFGHKQEFQTGQELQVFQKWTEKYPCASPRWLWGSRVSL 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
+VYDPDYMK++L RSDPK Y + PWIG GLLLL+G+ WFQ RRMLTPAFHYDILKP
Sbjct: 98 VVYDPDYMKMILGRSDPKAGGSYTFITPWIGYGLLLLHGEAWFQHRRMLTPAFHYDILKP 157
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV LMA SVQVMLDKWE+L+ Q+ LEI VSLMTLDTIMKCAFS+QG+ Q D +S +Y
Sbjct: 158 YVRLMADSVQVMLDKWEELLTQNSHLEIFEHVSLMTLDTIMKCAFSYQGNHQADRNSQAY 217
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI D+ NL R ++ F Q DI Y L+ E +NH+A +IAHQHTDRVI+LRKAQLQ +
Sbjct: 218 IQAIRDMNNLVFARVRNVFYQKDIFYGLTSEGRRNHKARQIAHQHTDRVIKLRKAQLQDE 277
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++E VR KRHLDFL+ILL A+ME G LSD DL EVDTFMFE H TASG
Sbjct: 278 GELEKVRNKRHLDFLDILLFAKMENGKGLSDKDLRAEVDTFMFEGHDTTASG 329
>ref|XP_850244.1| PREDICTED: similar to cytochrome P450, family 4, subfamily B,
polypeptide 1 isoform 2 [Canis familiaris].
Length = 511
Score = 264 bits (675), Expect = 9e-71
Identities = 134/291 (46%), Positives = 175/291 (60%)
Frame = +2
Query: 134 LRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVL 313
LRRQ L +A+ FP PP+HWL+GH++E Q+ L ++ +Y A WL +
Sbjct: 34 LRRQMLARAMDSFPGPPTHWLFGHAQEIQQTGSLDKVVTWAHQYDYAHPLWLGPFLGFLN 93
Query: 314 VYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPY 493
+Y+PDY K V +R DPK + VY + WIG GLL+L G W+Q R++LTP FHYD+LK Y
Sbjct: 94 IYEPDYAKAVYSRGDPKAADVYDFFLQWIGKGLLVLQGPKWYQHRKLLTPGFHYDVLKSY 153
Query: 494 VGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYI 673
V + S MLDKWE+ +D +I V M LD++MKC F S DS SY
Sbjct: 154 VAVFTNSTHAMLDKWEEKAREDKSFDIFCDVGYMALDSLMKCTFGKGDSSLGHRDS-SYY 212
Query: 674 QAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQG 853
A+ DL L R +S ND IY L+P + RA + AH HTD+VI+ RKA LQ +
Sbjct: 213 SAVRDLTLLMQQRIESFQYHNDFIYWLTPHGRRFLRACQAAHDHTDQVIRERKAALQDEK 272
Query: 854 KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ E ++ +RHLDFL+ILL A+ E G LSD DL EVDTFMFE H T SG
Sbjct: 273 EQEKIQNRRHLDFLDILLGARDENGIKLSDADLRAEVDTFMFEGHDTTTSG 323
>ref|NP_001193862.1| cytochrome P450 4X1 [Canis lupus familiaris].
Length = 507
Score = 246 bits (629), Expect = 2e-65
Identities = 124/287 (43%), Positives = 181/287 (63%), Gaps = 1/287 (0%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRR LL+ L FP+PP+HW YGH + Q+ +++ L + VEKYP A W+ +A
Sbjct: 33 YLRRLRLLRDLCPFPAPPTHWFYGHQKLLQD-GKIEKLEELVEKYPCAFPYWVGPFQAFF 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
+YDPDY K L R+DPK+ +Y+ LIP +G GL+ L G WFQ R +LTP F+ +ILK
Sbjct: 92 YIYDPDYAKTFLGRTDPKSKYLYKFLIPCLGNGLVNLEGSKWFQHRCLLTPGFNVNILKS 151
Query: 491 YVGLMAKSVQVMLDKWEQLVA-QDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHS 667
Y+ +MA SV ML KWE++ QD +E+ ++LMTLD +MKCAFS + + Q +
Sbjct: 152 YIKVMAHSVNTMLGKWEKICGTQDTVVEVFEHINLMTLDVLMKCAFSQETNCQISSNHDL 211
Query: 668 YIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQK 847
Y++ ++ + R S +DII++ SP+ H+ +I HQ+T++VIQ RK L+
Sbjct: 212 YVKTTFEASKINFYRLYSFLHHHDIIFKFSPQGHRLQELVKILHQYTEKVIQDRKKLLKD 271
Query: 848 QGKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXH 988
+ K N +K++ D+L+I+L AQ E GNS SDTDL EV+TF+ H
Sbjct: 272 EKKHGNTQKRKDQDYLDIILSAQAENGNSFSDTDLRSEVNTFILAGH 318
>ref|XP_860991.1| PREDICTED: similar to cytochrome P450, family 4, subfamily B,
polypeptide 1 isoform 3 [Canis familiaris].
Length = 496
Score = 238 bits (608), Expect = 5e-63
Identities = 127/291 (43%), Positives = 166/291 (57%)
Frame = +2
Query: 134 LRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVL 313
LRRQ L +A+ FP PP+HWL+GH++E Q+ L ++ +Y A WL +
Sbjct: 34 LRRQMLARAMDSFPGPPTHWLFGHAQEIQQTGSLDKVVTWAHQYDYAHPLWLGPFLGFLN 93
Query: 314 VYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPY 493
+Y+PDY K V +R G GLL+L G W+Q R++LTP FHYD+LK Y
Sbjct: 94 IYEPDYAKAVYSRG---------------GKGLLVLQGPKWYQHRKLLTPGFHYDVLKSY 138
Query: 494 VGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYI 673
V + S MLDKWE+ +D +I V M LD++MKC F S DS SY
Sbjct: 139 VAVFTNSTHAMLDKWEEKAREDKSFDIFCDVGYMALDSLMKCTFGKGDSSLGHRDS-SYY 197
Query: 674 QAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQG 853
A+ DL L R +S ND IY L+P + RA + AH HTD+VI+ RKA LQ +
Sbjct: 198 SAVRDLTLLMQQRIESFQYHNDFIYWLTPHGRRFLRACQAAHDHTDQVIRERKAALQDEK 257
Query: 854 KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ E ++ +RHLDFL+ILL A+ E G LSD DL EVDTFMFE H T SG
Sbjct: 258 EQEKIQNRRHLDFLDILLGARDENGIKLSDADLRAEVDTFMFEGHDTTTSG 308
>ref|XP_541982.2| PREDICTED: similar to Cytochrome P450 4F3 (CYPIVF3) (Leukotriene-B(4)
omega-hydroxylase) (Leukotriene-B(4) 20-monooxygenase)
(Cytochrome P450-LTB-omega) [Canis familiaris].
Length = 465
Score = 201 bits (511), Expect = 9e-52
Identities = 121/293 (41%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Frame = +2
Query: 155 KALQQFPSPPS-HWLYGHSREFQEESE-LQPLLKRVEKYPSACARWLWGTRAMVLVYDPD 328
+ LQ FP PP +W +GH Q E L + Y C W+ A++ ++ P
Sbjct: 46 RRLQCFPQPPKRNWFWGHVGLIQSSEEGLLYTQELASTYGDVCCWWVGPWHAVIRIFHPT 105
Query: 329 YMKVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVG 499
Y+K VL S PK V Y LL PW+G GLLL G W RRMLTPAFH++ILKPYV
Sbjct: 106 YIKPVLFSSAAIAPKDMVFYSLLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYVK 165
Query: 500 LMAKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQ 676
+ S VM KW++LV++ L++ +SLMTLD++ KC FS + Q YI
Sbjct: 166 IFNYSTNVMHAKWKRLVSEGSTHLDMFEHISLMTLDSLQKCVFSFDSNCQE--KPSEYIA 223
Query: 677 AIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGK 856
AI +L L + R + L D +Y L+P+ + RA R+ H TD VIQ R+ L QG
Sbjct: 224 AILELSALVAKRHQQ-ILHMDFLYYLTPDGQRFRRACRLVHNFTDAVIQERRRTLPVQGV 282
Query: 857 ---MENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ K + LDF+++LLL++ E G LSD D+ E DTFMFE H TASG
Sbjct: 283 DDFLMTKAKSKTLDFIDVLLLSKDEDGKQLSDKDIRAEADTFMFEGHDTTASG 335
>ref|XP_541983.2| PREDICTED: similar to Cytochrome P450 4F6 (CYPIVF6) [Canis
familiaris].
Length = 540
Score = 182 bits (461), Expect = 6e-46
Identities = 109/288 (37%), Positives = 156/288 (54%), Gaps = 6/288 (2%)
Frame = +2
Query: 161 LQQFPSPPS-HWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVL-VYDPDYM 334
L+ FP PP +W +GH + E +++ + Y W G VL + P ++
Sbjct: 68 LRCFPQPPKRNWFWGHLGLVKSNEEGLRMIEDLGHYFRDVHLWWIGPFYPVLRLVHPKFV 127
Query: 335 KVVL---ARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLM 505
+L A PK Y L PW+G GLLL G W RR+LTPAFH++ILK YV +
Sbjct: 128 APLLQAPATIVPKDMFFYNFLKPWLGDGLLLSAGDKWSHHRRLLTPAFHFEILKSYVKIF 187
Query: 506 AKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAI 682
+S +M KW++LV++ L++ +SLMTLD++ KC FS + Q YI AI
Sbjct: 188 NRSADIMHAKWKRLVSEGSTHLDMFEHISLMTLDSLQKCVFSFDSNCQE--SPSEYIAAI 245
Query: 683 WDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGKME 862
+L L R + L D +Y LSP+ + RA + H TD +IQ R+ L +G +
Sbjct: 246 LELSALVVKRNEQVLLYLDFLYNLSPDGRRFRRACELVHNFTDAIIQERRHTLISRGSCD 305
Query: 863 NVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K +DF+++LLLA+ E G LSD D+ E DTFMFE H TASG
Sbjct: 306 FLKSKT-MDFIDVLLLAKDEAGKQLSDEDIRAEADTFMFEGHDTTASG 352
>ref|XP_541984.2| PREDICTED: similar to cytochrome P450, family 2, subfamily E,
polypeptide 2 homolog [Canis familiaris].
Length = 531
Score = 178 bits (451), Expect = 8e-45
Identities = 109/292 (37%), Positives = 157/292 (53%), Gaps = 8/292 (2%)
Frame = +2
Query: 155 KALQQFPSPPS-HWLYGHSREF-QEESELQPLLKRVEKYPSACARWLWGTRAMVLVYDPD 328
+ L FP PP +WL GH + E+ LQ K ++ W+ ++++ PD
Sbjct: 54 RRLSCFPQPPRRNWLLGHLGMYLPNETGLQDEKKVLDNMHHVILVWIGPVLPLLVLVHPD 113
Query: 329 YMKVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVG 499
Y+K ++ S PK + Y L PW+G GLLL G W + RR+LTPAFH+DILKPY+
Sbjct: 114 YIKPLVGASAAIAPKDDLFYGFLKPWLGDGLLLSKGDKWSRHRRLLTPAFHFDILKPYMK 173
Query: 500 LMAKSVQVMLDKWEQLVAQDP-RLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQ 676
+ + +M KW +L L++ VSLMTLD++ KC FS+ + Q YI
Sbjct: 174 IFNQCTDIMHGKWRRLAQGSVISLDMFEHVSLMTLDSLQKCVFSYNSNCQE--KMSDYIS 231
Query: 677 AIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGK 856
AI +L L R D IY L+ + + +A H+ T VIQ R+ L++QG
Sbjct: 232 AIIELSALVVRRQYRLHHHIDFIYYLTADGRRFRQACDTVHRFTTEVIQERRQALRQQGA 291
Query: 857 MENVRKK--RHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K + LDF+++LLLA+ E G LSD D+ E DTFMFE H T+SG
Sbjct: 292 ETWLKGKQGKTLDFIDVLLLARDEDGRELSDEDIRAEADTFMFEGHDTTSSG 343
>ref|XP_852938.1| PREDICTED: similar to cytochrome P450, family 4, subfamily A,
polypeptide 11 [Canis familiaris].
Length = 411
Score = 136 bits (343), Expect = 3e-32
Identities = 89/203 (43%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Frame = +2
Query: 401 GCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLMAKSVQVML-DKWEQLVAQDPRLEIV 577
G GLLLLNG+ WFQ RRMLTPAFHYDILKPYV LM SVQVML +KWE+L++Q+ LEI
Sbjct: 71 GYGLLLLNGEIWFQHRRMLTPAFHYDILKPYVRLMVDSVQVMLVNKWEELLSQNSHLEIF 130
Query: 578 GPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAIWDLKNLFSTRTKSAFLQNDIIYRLS 757
VSLMTLD T K AF +D
Sbjct: 131 EHVSLMTLD----------------------------------TIMKCAFRPSD------ 150
Query: 758 PESHKNHRAARIAHQHTDRVIQLRKAQLQKQGKMENVRKKRHLDFLNILLLAQMEKGNSL 937
Q + +G+ VR KRHLDFL+I A+ME G L
Sbjct: 151 ---------------------QAEEGSATGRGRAGEVRNKRHLDFLDISFFAKMENGRGL 189
Query: 938 SDTDLPCEVDTFMFEXHXHTASG 1006
SD DL EVDTF FE H TASG
Sbjct: 190 SDKDLRAEVDTFKFEGHDTTASG 212
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 41,139,465
Number of extensions: 1103341
Number of successful extensions: 4317
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 4291
Number of HSP's successfully gapped: 12
Length of query: 336
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 233
Effective length of database: 15,440,896
Effective search space: 3597728768
Effective search space used: 3597728768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007964
(1008 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999589.1| cytochrome P450 4A24 [Sus scrofa]. 576 e-165
Alignment gi|XP_003356524.1| PREDICTED: cytochrome P450 4A24-like [Sus sc... 558 e-159
Alignment gi|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus sc... 556 e-159
Alignment gi|NP_999590.1| taurochenodeoxycholic 6 alpha-hydroxylase [Sus ... 522 e-148
Alignment gi|XP_003356525.1| PREDICTED: cytochrome P450 4A24-like isoform... 518 e-147
Alignment gi|XP_003128064.2| PREDICTED: cytochrome P450 4A24-like isoform... 508 e-144
Alignment gi|XP_003127953.1| PREDICTED: cytochrome P450 4A11-like [Sus sc... 437 e-123
Alignment gi|XP_003128065.1| PREDICTED: cytochrome P450 4B1-like [Sus scr... 267 6e-72
Alignment gi|XP_003356523.1| PREDICTED: cytochrome P450 4X1-like [Sus scr... 231 4e-61
Alignment gi|XP_003356530.1| PREDICTED: cytochrome P450 4A24-like [Sus sc... 210 1e-54
>ref|NP_999589.1| cytochrome P450 4A24 [Sus scrofa].
Length = 504
Score = 576 bits (1485), Expect = e-165
Identities = 282/292 (96%), Positives = 284/292 (97%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL RQWLLKALQQFPSPPSHWLYGHSREFQEESEL PLLKRVEKYPSACARWLWGTRAMV
Sbjct: 32 YLHRQWLLKALQQFPSPPSHWLYGHSREFQEESELPPLLKRVEKYPSACARWLWGTRAMV 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP
Sbjct: 92 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 151
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY
Sbjct: 152 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 211
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPE HKNHRAARIAHQHTDRVIQLRKAQLQKQ
Sbjct: 212 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPEGHKNHRAARIAHQHTDRVIQLRKAQLQKQ 271
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G+MENVRKKRHLDFL+ILLLAQMEKGNSLSDTDL EVDTFMFE H TASG
Sbjct: 272 GEMENVRKKRHLDFLDILLLAQMEKGNSLSDTDLRAEVDTFMFEGHDTTASG 323
>ref|XP_003356524.1| PREDICTED: cytochrome P450 4A24-like [Sus scrofa].
Length = 504
Score = 558 bits (1439), Expect = e-159
Identities = 272/292 (93%), Positives = 279/292 (95%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQWLLKALQQFPSPPSHWLYGHSREFQ+E E Q LLKR+EKYPSACARW WGTRAMV
Sbjct: 32 YLRRQWLLKALQQFPSPPSHWLYGHSREFQQEGEQQSLLKRIEKYPSACARWRWGTRAMV 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
LVYDPDYMKVVLARSDPK SVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP
Sbjct: 92 LVYDPDYMKVVLARSDPKNSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 151
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY
Sbjct: 152 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 211
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAIWDLKNLFS RTKSAFLQNDIIYRLSPE KNHRAARIAHQHTDRVIQL+KAQ+QKQ
Sbjct: 212 IQAIWDLKNLFSIRTKSAFLQNDIIYRLSPEGRKNHRAARIAHQHTDRVIQLKKAQVQKQ 271
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G+MENVRKKRHLDFL+ILLLA+MEKGNSLSDTDL EVDTFMFE H TASG
Sbjct: 272 GEMENVRKKRHLDFLDILLLARMEKGNSLSDTDLRAEVDTFMFEGHDTTASG 323
>ref|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus scrofa].
Length = 504
Score = 556 bits (1434), Expect = e-159
Identities = 272/292 (93%), Positives = 277/292 (94%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL RQWLLKALQQFPSPPSHWLYGHSREFQEE E Q LLKR+ KYPSACARW WGTRA+V
Sbjct: 32 YLHRQWLLKALQQFPSPPSHWLYGHSREFQEEGEQQSLLKRIGKYPSACARWRWGTRALV 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
LVYDPDYMKVVLARSDPK SVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP
Sbjct: 92 LVYDPDYMKVVLARSDPKNSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 151
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGS QTDGDSHSY
Sbjct: 152 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSTQTDGDSHSY 211
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPE K+HRAARIAHQHTDRVIQLRKAQLQKQ
Sbjct: 212 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPEGRKSHRAARIAHQHTDRVIQLRKAQLQKQ 271
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G+MENVRKKRHLDFL+ILLLAQMEKGNSLSDTDL EVDTFMFE H TASG
Sbjct: 272 GEMENVRKKRHLDFLDILLLAQMEKGNSLSDTDLRAEVDTFMFEGHDTTASG 323
>ref|NP_999590.1| taurochenodeoxycholic 6 alpha-hydroxylase [Sus scrofa].
Length = 504
Score = 522 bits (1344), Expect = e-148
Identities = 254/292 (86%), Positives = 266/292 (91%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV
Sbjct: 32 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
LVYDPDYMKVVLARS+PK V+YRLLIPWIGCGLLLLNGQ WFQRRRMLTPAFHYDILKP
Sbjct: 92 LVYDPDYMKVVLARSEPKAPVLYRLLIPWIGCGLLLLNGQMWFQRRRMLTPAFHYDILKP 151
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGS QTDGDS SY
Sbjct: 152 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSAQTDGDSQSY 211
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAIWDLKNL +R +SAFLQNDIIYRLSPE + RA + HQHTDRVIQLRK LQK+
Sbjct: 212 IQAIWDLKNLIFSRLRSAFLQNDIIYRLSPEGRQCQRACQKVHQHTDRVIQLRKTHLQKE 271
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G+MENV+KKRHLDFL+ILL A+ME GNSLSDTD+ EVDTFM H TASG
Sbjct: 272 GEMENVKKKRHLDFLDILLFARMENGNSLSDTDVRAEVDTFMAAGHDSTASG 323
>ref|XP_003356525.1| PREDICTED: cytochrome P450 4A24-like isoform 2 [Sus scrofa].
Length = 504
Score = 518 bits (1333), Expect = e-147
Identities = 254/292 (86%), Positives = 268/292 (91%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESEL PLLKRVEKYPSACA W WGTRAMV
Sbjct: 32 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELPPLLKRVEKYPSACALWRWGTRAMV 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
LVYDPDYMKVVLARSDPK SVVYRLLIPWIG GLLLL+GQ WFQ RRMLTPAFH+DILKP
Sbjct: 92 LVYDPDYMKVVLARSDPKNSVVYRLLIPWIGNGLLLLDGQAWFQHRRMLTPAFHHDILKP 151
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV LMA SVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDG+SHSY
Sbjct: 152 YVRLMADSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGNSHSY 211
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI DL +L +R ++ F QND+IYRLSPE ++HRA ++AHQHTDRVIQLRKAQLQKQ
Sbjct: 212 IQAIRDLNDLLFSRVRNVFQQNDVIYRLSPEGRRSHRACQLAHQHTDRVIQLRKAQLQKQ 271
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G+MENVRKKRHLDFL+ILLLAQMEKGNSLSDTDL EVDTFMFE H TASG
Sbjct: 272 GEMENVRKKRHLDFLDILLLAQMEKGNSLSDTDLRAEVDTFMFEGHDTTASG 323
>ref|XP_003128064.2| PREDICTED: cytochrome P450 4A24-like isoform 1 [Sus scrofa].
Length = 504
Score = 508 bits (1308), Expect = e-144
Identities = 247/292 (84%), Positives = 265/292 (90%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESEL PLLKRVEKYPSACA W WGTRAMV
Sbjct: 32 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELPPLLKRVEKYPSACALWRWGTRAMV 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
LVYDPDYMKVVLARS+PK + Y+ LIPW+G GLLLL+GQ WFQ RRMLTPAFH+DILKP
Sbjct: 92 LVYDPDYMKVVLARSEPKPHITYKYLIPWLGNGLLLLDGQAWFQHRRMLTPAFHHDILKP 151
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV LMA SVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDG+SHSY
Sbjct: 152 YVRLMADSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGNSHSY 211
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI DL +L +R ++ F QND+IYRLSPE ++HRA ++AHQHTDRVIQLRKAQLQKQ
Sbjct: 212 IQAIRDLNDLLFSRVRNVFQQNDVIYRLSPEGRRSHRACQLAHQHTDRVIQLRKAQLQKQ 271
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G+MENVRKKRHLDFL+ILLLAQMEKGNSLSDTDL EVDTFMFE H TASG
Sbjct: 272 GEMENVRKKRHLDFLDILLLAQMEKGNSLSDTDLRAEVDTFMFEGHDTTASG 323
>ref|XP_003127953.1| PREDICTED: cytochrome P450 4A11-like [Sus scrofa].
Length = 510
Score = 437 bits (1125), Expect = e-123
Identities = 210/292 (71%), Positives = 245/292 (83%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL RQWLLKALQQFPSPPSHWLYGHSRE ++++LQ L+RV+ +P AC WLWG +A +
Sbjct: 38 YLHRQWLLKALQQFPSPPSHWLYGHSREHLKDNDLQEALRRVKNFPRACPYWLWGNKAHL 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
++YDPDYMKVVL RSDPK + V++ L PWIG GLLL +GQTWFQ RRMLTPAFHYDILKP
Sbjct: 98 VIYDPDYMKVVLGRSDPKLTDVHKFLSPWIGYGLLLSDGQTWFQHRRMLTPAFHYDILKP 157
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV LMA SV+VMLDKWEQLV QD LEI G VSLMTLDT+MKCAFS+QGSVQTD +SHSY
Sbjct: 158 YVNLMADSVKVMLDKWEQLVTQDSHLEIFGHVSLMTLDTVMKCAFSYQGSVQTDRNSHSY 217
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQA+ +L +LF R +SA QNDIIYRLSPE + +A ++AHQHTD+VI+LRKA LQK+
Sbjct: 218 IQAVGNLNSLFVARLRSALYQNDIIYRLSPEGRLSRQACQLAHQHTDQVIRLRKAHLQKE 277
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G+MEN+RKKRHLDFL+ILL A+ME G+SLSDTDL EVDTFMFE H TASG
Sbjct: 278 GEMENLRKKRHLDFLDILLFARMENGSSLSDTDLRAEVDTFMFEGHDTTASG 329
>ref|XP_003128065.1| PREDICTED: cytochrome P450 4B1-like [Sus scrofa].
Length = 511
Score = 267 bits (683), Expect = 6e-72
Identities = 133/291 (45%), Positives = 182/291 (62%)
Frame = +2
Query: 134 LRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVL 313
LRRQ L +A+ +FP PP+HW++GH+ E Q+ L ++ ++P A WL +
Sbjct: 34 LRRQMLARAMDKFPGPPTHWIFGHALEIQQTGSLDKMVSWAHQFPHAHPLWLGPFLGFLN 93
Query: 314 VYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPY 493
+Y+P+Y K V +R DPK S +Y + WIG GLL+L+G WFQ R++LTP FH+D+LKPY
Sbjct: 94 IYEPEYAKAVYSRGDPKASDLYDFFLQWIGKGLLVLHGPKWFQHRKLLTPGFHHDVLKPY 153
Query: 494 VGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYI 673
V +MA S +VMLDKWE+ +D +I V M L+ +MKC F +G+ + ++Y
Sbjct: 154 VAVMANSARVMLDKWEEKAREDKSFDIYHDVGHMALELLMKCTFG-KGTSGLNYSDNAYH 212
Query: 674 QAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQG 853
A+ DL L R S ND IY L+P + RA R+AH HTD+VI+ RKA LQ +
Sbjct: 213 LAVRDLTLLMQQRLSSFQYHNDFIYWLTPHGRRFLRACRVAHDHTDQVIRERKAALQDKE 272
Query: 854 KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ E ++ +RHLDFL+ILL AQ E LSD DL EVDTFMFE H T SG
Sbjct: 273 EQERIQSRRHLDFLDILLGAQDEDRVKLSDADLRAEVDTFMFEGHDTTTSG 323
>ref|XP_003356523.1| PREDICTED: cytochrome P450 4X1-like [Sus scrofa].
Length = 430
Score = 231 bits (590), Expect = 4e-61
Identities = 119/293 (40%), Positives = 176/293 (60%), Gaps = 1/293 (0%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL+RQ LL+ L+ FPSPPSHW YGH + Q ++ L + +KYP A WL +A
Sbjct: 33 YLQRQRLLRDLRPFPSPPSHWFYGHQKIIQNGG-METLGEITDKYPRAFPFWLGPFQAFF 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
+YDPDY K +L+R DPK++ +Y+ + P +G GLL LNG WFQ RR+LTP H + LK
Sbjct: 92 FIYDPDYAKTLLSRPDPKSNFLYKFMDPVVGKGLLNLNGPKWFQHRRLLTPGLHLNALKS 151
Query: 491 YVGLMAKSVQVMLDKWEQLV-AQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHS 667
+V +MA SV ML KWE++ +D LEI V+L+TLD IMKC F + + Q +
Sbjct: 152 HVEIMAHSVNTMLGKWERICGTEDTLLEISAHVTLLTLDIIMKCVFGLETNCQINSTYDH 211
Query: 668 YIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQK 847
YI+A + N+ R + +D+I++ SP+ H+ + +I H +T+++IQ K
Sbjct: 212 YIKAANESSNIIFYRLYNFLYHHDVIFKFSPKGHRLWQLRKILHPYTEKIIQAGKNSRMN 271
Query: 848 QGKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ + N +K+++ + L+I L A E G+S SDTDL EV+TF+ H G
Sbjct: 272 ENQQGNTQKRKYQNVLDIALSALAENGDSFSDTDLWSEVNTFLLAGHETMTGG 324
>ref|XP_003356530.1| PREDICTED: cytochrome P450 4A24-like [Sus scrofa].
Length = 357
Score = 210 bits (534), Expect = 1e-54
Identities = 105/115 (91%), Positives = 108/115 (93%)
Frame = +2
Query: 662 HSYIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQL 841
HSYIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPE KNHRAARIAHQHTDRVIQLRKAQL
Sbjct: 62 HSYIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPEGRKNHRAARIAHQHTDRVIQLRKAQL 121
Query: 842 QKQGKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
QKQG+MENVRKKRHLDFL+ILLLA+MEKGNSLSDTDL EVDTFMFE H TASG
Sbjct: 122 QKQGEMENVRKKRHLDFLDILLLARMEKGNSLSDTDLRAEVDTFMFEGHDTTASG 176
Score = 66.6 bits (161), Expect = 2e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSRE 214
YLRRQWLLKALQQFPSPPSHWLYGHSRE
Sbjct: 32 YLRRQWLLKALQQFPSPPSHWLYGHSRE 59
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,468,435
Number of extensions: 692527
Number of successful extensions: 2687
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 2648
Number of HSP's successfully gapped: 17
Length of query: 336
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 237
Effective length of database: 8,879,129
Effective search space: 2104353573
Effective search space used: 2104353573
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007964
(1008 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_034141.3| cytochrome P450 4A10 [Mus musculus]. 386 e-107
Alignment gi|NP_001093651.1| cytochrome P450, family 4, subfamily a, poly... 385 e-107
Alignment gi|NP_758510.2| cytochrome P450, family 4, subfamily a family [... 380 e-106
Alignment gi|NP_803125.2| cytochrome P450 4A12A [Mus musculus]. 379 e-105
Alignment gi|NP_964002.2| cytochrome P450, family 4, subfamily a, polypep... 379 e-105
Alignment gi|NP_001093653.1| cytochrome P450, family 4, subfamily a, poly... 367 e-101
Alignment gi|NP_031848.1| cytochrome P450 4A14 precursor [Mus musculus]. 363 e-100
Alignment gi|NP_001093655.1| cytochrome P450, family 4, subfamily a, poly... 357 1e-98
Alignment gi|NP_031849.1| cytochrome P450 4B1 [Mus musculus]. 270 1e-72
Alignment gi|NP_001003947.1| cytochrome P450, family 4, subfamily x, poly... 250 1e-66
>ref|NP_034141.3| cytochrome P450 4A10 [Mus musculus].
Length = 509
Score = 386 bits (992), Expect = e-107
Identities = 184/292 (63%), Positives = 225/292 (77%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL RQWLLKA QQFPSPP HW +GH + F+ + ELQ ++ +E +PSA RW WG++A +
Sbjct: 38 YLHRQWLLKAFQQFPSPPFHWFFGHEK-FKGDQELQEIVSCIENFPSAFPRWFWGSKAYL 96
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
VYDPDYMKV+L RSDPK + YRLL PWIG GLLLLNGQ WFQ RRMLTPAFHYDILKP
Sbjct: 97 TVYDPDYMKVILGRSDPKANGAYRLLAPWIGYGLLLLNGQPWFQHRRMLTPAFHYDILKP 156
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV MA S+++MLDKWE+L QD +EI +SLMTLDT+MKCAFSH+GSVQ DG+ +Y
Sbjct: 157 YVKNMADSIRLMLDKWERLADQDSSIEIFQHISLMTLDTVMKCAFSHKGSVQVDGNYRTY 216
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
+QAI DL NLF +R ++ F QND IY+LS +A ++AH HTD VI+LRK QLQ +
Sbjct: 217 LQAIGDLNNLFHSRVRNIFHQNDTIYKLSSNGRLAKQACQLAHDHTDGVIKLRKDQLQDE 276
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++E ++KKR LDFL+ILL A+ME G+S+SD DL EVDTFMFE H TASG
Sbjct: 277 GELEKIKKKRRLDFLDILLFARMENGDSMSDKDLRAEVDTFMFEGHDTTASG 328
>ref|NP_001093651.1| cytochrome P450, family 4, subfamily a, polypeptide 32 [Mus
musculus].
Length = 509
Score = 385 bits (990), Expect = e-107
Identities = 184/292 (63%), Positives = 226/292 (77%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL R+WLLKALQQFPSPP HW +GH +F+ E EL+ ++ +E +PSA W WG+ A +
Sbjct: 38 YLHRKWLLKALQQFPSPPFHWFFGHE-QFKGEQELKEVVSCIEHFPSAFPCWFWGSNAYL 96
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
VYDPDYMKV+L RSDPK + +YRLL PWIG GLLLLNGQ WFQ RRMLTPAFHYDILKP
Sbjct: 97 TVYDPDYMKVILGRSDPKANGIYRLLAPWIGYGLLLLNGQPWFQHRRMLTPAFHYDILKP 156
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV MA S+++MLDKWE+L QD +EI +SLMTLDT+MKCAFSH+GSVQ DG+ +Y
Sbjct: 157 YVKNMADSIRLMLDKWERLAGQDSSIEIFQHISLMTLDTVMKCAFSHKGSVQVDGNYKTY 216
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
+QAI DL NLF +R ++ F QND IYRLS +A ++AH HTD VI++RK QLQ +
Sbjct: 217 LQAIGDLNNLFHSRVRNIFHQNDTIYRLSSNGRLAKQACQLAHDHTDGVIKMRKDQLQDE 276
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++EN++KKR LDFL+ILL A+ME G+S+SD DL EVDTFMFE H TASG
Sbjct: 277 GELENIKKKRRLDFLDILLFARMENGDSMSDKDLRAEVDTFMFEGHDTTASG 328
>ref|NP_758510.2| cytochrome P450, family 4, subfamily a family [Mus musculus].
Length = 508
Score = 380 bits (976), Expect = e-106
Identities = 183/292 (62%), Positives = 223/292 (76%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL RQWLL + QQFPSPPSHWL+GH + ++ +LQ +L R++ +PSAC +WLWG++ +
Sbjct: 38 YLHRQWLLSSTQQFPSPPSHWLFGH--KILKDQDLQDILTRIKNFPSACPQWLWGSKVRI 95
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
VYDPDYMK++L RSDPK YR L PWIG GLLLL+GQTWFQ RRMLTPAFHYDILKP
Sbjct: 96 QVYDPDYMKLILGRSDPKAHGSYRFLAPWIGRGLLLLDGQTWFQHRRMLTPAFHYDILKP 155
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
Y +MA SV VMLDKWEQ+V QD LEI ++LMTLDTIMKCAFSH+GSVQ D SY
Sbjct: 156 YTEIMADSVHVMLDKWEQIVGQDSTLEIFQHITLMTLDTIMKCAFSHEGSVQLDRKYKSY 215
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQA+ DL NLF R ++ F QNDIIYR+S + A ++AH HTD+VI+ R++QLQ +
Sbjct: 216 IQAVEDLNNLFFLRVRNIFHQNDIIYRVSSNGCLANSACQLAHDHTDQVIKSRRSQLQDE 275
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++E ++KKR LDFL+ILL A+ME G SLSD DL EVDTFMFE H TASG
Sbjct: 276 EELEKLKKKRRLDFLDILLFARMENGKSLSDKDLRAEVDTFMFEGHDTTASG 327
>ref|NP_803125.2| cytochrome P450 4A12A [Mus musculus].
Length = 508
Score = 379 bits (973), Expect = e-105
Identities = 181/292 (61%), Positives = 225/292 (77%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL RQWLL + QQFPSPPSHWL+GH + ++ +LQ +L R++ +PSAC +WLWG++ +
Sbjct: 38 YLHRQWLLSSTQQFPSPPSHWLFGH--KILKDQDLQDILTRIKNFPSACPQWLWGSKVRI 95
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
VYDPDYMK++L RSDPK + YR L PWIG GLL+L+GQTWFQ RRMLTPAFHYDILKP
Sbjct: 96 QVYDPDYMKLILGRSDPKANGSYRFLAPWIGRGLLMLDGQTWFQHRRMLTPAFHYDILKP 155
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
Y +MA SV+VMLDKWEQ+V QD LEI ++LMTLDTIMKCAFSH+GSVQ D SY
Sbjct: 156 YTEIMADSVRVMLDKWEQIVGQDSTLEIFRHITLMTLDTIMKCAFSHEGSVQLDRKYKSY 215
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQA+ DL +L +R ++ F QNDIIYR+S K + A ++AH HTD+VI+ R+ QLQ +
Sbjct: 216 IQAVEDLNDLVFSRVRNIFHQNDIIYRVSSNGCKANSACKLAHDHTDQVIKSRRIQLQDE 275
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++E ++KKR LDFL+ILL A+ME G SLSD DL EVDTFMFE H TASG
Sbjct: 276 EELEKLKKKRRLDFLDILLFARMENGKSLSDKDLRAEVDTFMFEGHDTTASG 327
>ref|NP_964002.2| cytochrome P450, family 4, subfamily a, polypeptide 31 [Mus
musculus].
Length = 509
Score = 379 bits (972), Expect = e-105
Identities = 179/292 (61%), Positives = 226/292 (77%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL R+WLLKALQQFPSPP HW +GH +F+ + ELQ ++ +E +PSA RW WG++A +
Sbjct: 38 YLHRKWLLKALQQFPSPPFHWFFGHE-QFKGDQELQEIVSCIENFPSAFPRWFWGSKAYL 96
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
VYDPDYMKV+L RSDPK + YRLL PWIG GLLLLNGQ+WFQ R+MLTPAFHYDILK
Sbjct: 97 TVYDPDYMKVILGRSDPKANGAYRLLAPWIGYGLLLLNGQSWFQHRKMLTPAFHYDILKT 156
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV MA S+++MLDKWE+L QD +EI +SLMTLDT+MKCAFSH+GSVQ DG+ +Y
Sbjct: 157 YVKNMADSIRLMLDKWERLAGQDSSIEIFQHISLMTLDTVMKCAFSHKGSVQVDGNYKTY 216
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
+QAI DL NL +R ++ F QND IY+LS +++A ++AH HTD VI++RK QLQ +
Sbjct: 217 LQAIGDLNNLVHSRVRNMFHQNDTIYKLSSNGRLSNQACQLAHDHTDGVIKMRKDQLQDE 276
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++EN++KKR LDFL+ILL A+ME +S+SD DL EVDTFM E H TASG
Sbjct: 277 GELENIKKKRRLDFLDILLFARMENEDSMSDKDLRAEVDTFMIEGHDTTASG 328
>ref|NP_001093653.1| cytochrome P450, family 4, subfamily a, polypeptide 29 [Mus
musculus].
Length = 509
Score = 367 bits (941), Expect = e-101
Identities = 177/292 (60%), Positives = 221/292 (75%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQWLL+AL QFPSPPSHWL+GH +F+ + EL+ +L+ +EK+P A W+WG+ +
Sbjct: 38 YLRRQWLLRALYQFPSPPSHWLFGHCLQFKVDEELRWILRYLEKFPGAFLHWIWGSHVFI 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
V DPDYMKV+L R+DPK S+ YR L PW+G GL LNG WFQ RR+LTPAFHYDILKP
Sbjct: 98 KVCDPDYMKVILGRADPKASL-YRFLTPWLGHGLFFLNGDEWFQHRRLLTPAFHYDILKP 156
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVG+MA SVQVML+KWEQ+ QD LEI P+SLM LDTIMK AFS+QGSVQ D S +Y
Sbjct: 157 YVGIMADSVQVMLEKWEQIACQDITLEIFHPISLMMLDTIMKYAFSYQGSVQLDRSSQAY 216
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
+QA+ DL NL ++R K+ FL NDIIY L+ S + + A +IAH+HTDRV++LRKAQLQ
Sbjct: 217 LQAVSDLNNLVTSRMKNVFLHNDIIYNLTSHSRRTNSACQIAHEHTDRVVKLRKAQLQDN 276
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
M+ +R KR LDFL+ILLL++M+ G+SLSD L EVD+ MF H ASG
Sbjct: 277 KSMKKLRGKRCLDFLDILLLSRMDDGSSLSDKALRAEVDSLMFGGHDTPASG 328
>ref|NP_031848.1| cytochrome P450 4A14 precursor [Mus musculus].
Length = 507
Score = 363 bits (931), Expect = e-100
Identities = 182/292 (62%), Positives = 220/292 (75%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQWLLK LQ FP PSHWL+GH + + ELQ +L VEK+PSAC + L G+ V
Sbjct: 38 YLRRQWLLKTLQHFPCMPSHWLWGHHLK---DKELQQILIWVEKFPSACLQCLSGSNIRV 94
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
L+YDPDY+KVVL RSDPK S +Y+ PWIG GLLLLNG+ WFQ RRMLTPAFHYDILKP
Sbjct: 95 LLYDPDYVKVVLGRSDPKASGIYQFFAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKP 154
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YV +MA SV +MLDKWE+L QD LEI VSLMTLDT+MKCAFS+QGSVQ D +S Y
Sbjct: 155 YVKIMADSVNIMLDKWEKLDGQDHPLEIFHCVSLMTLDTVMKCAFSYQGSVQLDENSKLY 214
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
+A+ DL NL R ++AF + +IIY +S + +H A +IAH+HTD VI++RK+QLQ +
Sbjct: 215 TKAVEDLNNLTFFRLRNAFYKYNIIYNMSSDGRLSHHACQIAHEHTDGVIKMRKSQLQNE 274
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+++ RKKRHLDFL+ILL A+ME NSLSD DL EVDTFMFE H TASG
Sbjct: 275 EELQKARKKRHLDFLDILLFARMEDRNSLSDEDLRAEVDTFMFEGHDTTASG 326
>ref|NP_001093655.1| cytochrome P450, family 4, subfamily a, polypeptide 30b, pseudogene
[Mus musculus].
Length = 508
Score = 357 bits (915), Expect = 1e-98
Identities = 177/293 (60%), Positives = 218/293 (74%), Gaps = 1/293 (0%)
Frame = +2
Query: 131 YLRRQWLLKALQQFP-SPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAM 307
YL RQWL+K+LQQFP +PP WL+G++ + Q+ LQ +L VEK+PS RWLWG A
Sbjct: 38 YLHRQWLIKSLQQFPPAPPPQWLFGNTLKDQD---LQQILLCVEKFPSTYVRWLWGNHAR 94
Query: 308 VLVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILK 487
V++YDPDYMKV+L RSDPK Y PWIG GLLLLNG+ WFQ RRMLTPAFHYDILK
Sbjct: 95 VVIYDPDYMKVILGRSDPKVVRSYSFFAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILK 154
Query: 488 PYVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHS 667
PYVG+M SV VMLDKWEQLV QD LEI +SLMT++T+MKCAFS+QGSVQ + +S S
Sbjct: 155 PYVGIMVDSVHVMLDKWEQLVDQDCPLEIYQDISLMTMETMMKCAFSYQGSVQLEENSKS 214
Query: 668 YIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQK 847
YI+A+ DL +L R ++ F QN+ IY LS + A +IAH+HT+RVI++RKAQLQ
Sbjct: 215 YIKAVEDLTHLIYLRVRNGFHQNNTIYSLSSNGRSFYHACQIAHKHTERVIRMRKAQLQN 274
Query: 848 QGKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ ++E RKK+ LDFL+ILL AQ E G SLSD D+ E+DTFMFE H TASG
Sbjct: 275 EAELEKFRKKKRLDFLDILLFAQTEDGKSLSDEDVRAEMDTFMFEGHNTTASG 327
>ref|NP_031849.1| cytochrome P450 4B1 [Mus musculus].
Length = 511
Score = 270 bits (691), Expect = 1e-72
Identities = 138/290 (47%), Positives = 181/290 (62%)
Frame = +2
Query: 137 RRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVLV 316
RRQ L +AL FP PP HWL+GH+ E Q+ L ++ E++P A WL + +
Sbjct: 35 RRQKLARALDSFPGPPKHWLFGHALEIQKTGGLDKVVTWTEQFPYAHPLWLGQFIVFLNI 94
Query: 317 YDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYV 496
Y+PDY K V +R DPK + VY + WIG GLL+L G WFQ R++LTP FHYD+LKPYV
Sbjct: 95 YEPDYAKAVYSRGDPKAAYVYDFFLQWIGKGLLVLEGPKWFQHRKLLTPGFHYDVLKPYV 154
Query: 497 GLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQ 676
+ A+S +VMLDKWE+ +++ +I V M LDT+MKC F S + D +SY
Sbjct: 155 AIFAESTRVMLDKWEKKASENKSFDIFCDVGHMALDTLMKCTFGKGDSGLSHSD-NSYYL 213
Query: 677 AIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGK 856
A+ DL L R S ND IY L+P + RA +IAH HTD VI+ RKA LQ + +
Sbjct: 214 AVSDLTLLMQQRIDSFQYHNDFIYWLTPHGRRFLRACQIAHDHTDHVIRQRKAALQDEKE 273
Query: 857 MENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ ++++RHLDFL+ILL A+ E G LSD DL EVDTFMFE H T SG
Sbjct: 274 QKKLQERRHLDFLDILLGARDESGIKLSDADLRAEVDTFMFEGHDTTTSG 323
>ref|NP_001003947.1| cytochrome P450, family 4, subfamily x, polypeptide 1 [Mus musculus].
Length = 507
Score = 250 bits (639), Expect = 1e-66
Identities = 130/292 (44%), Positives = 191/292 (65%), Gaps = 1/292 (0%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQ LL+ L FP PP+HWL GH + F +E ++ L + V+K+P A W+ +A
Sbjct: 33 YLRRQRLLRDLSPFPGPPAHWLLGHQK-FLQEDNMETLDEIVKKHPCAFPCWVGPFQAFF 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
+YDPDY K+ L+R+DPK +++LL P IG GLL L+G WFQ R +LTPAFH DILKP
Sbjct: 92 YIYDPDYAKIFLSRTDPKMQYLHQLLTPCIGRGLLNLDGPRWFQHRCLLTPAFHQDILKP 151
Query: 491 YVGLMAKSVQVMLDKWEQL-VAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHS 667
V MA SV+VMLDKWE++ Q+ +E+ ++LMTLD IMKCAF + + Q +G S
Sbjct: 152 CVDTMAHSVKVMLDKWEKMWTTQETTIEVFEHINLMTLDIIMKCAFGQETNCQINGTYES 211
Query: 668 YIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQK 847
Y++A ++L + S+R + + +DII++LSP+ H ++ HQ+T+++IQ RK L+
Sbjct: 212 YVKATFELGEIISSRLYNFWHHHDIIFKLSPKGHCFQELGKVIHQYTEKIIQDRKKILKN 271
Query: 848 QGKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTAS 1003
Q K ++ + + FL+I+L AQ E + SD DL EV+TFM+ H +A+
Sbjct: 272 QVKQDDTQTSQ--IFLDIVLSAQAEDERAFSDADLRAEVNTFMWAGHDASAA 321
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 34,286,305
Number of extensions: 914301
Number of successful extensions: 3461
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 3402
Number of HSP's successfully gapped: 25
Length of query: 336
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 234
Effective length of database: 12,553,887
Effective search space: 2937609558
Effective search space used: 2937609558
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007964
(1008 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000769.2| cytochrome P450 4A11 [Homo sapiens]. 421 e-118
Alignment gi|NP_001010969.2| cytochrome P450 4A22 precursor [Homo sapiens]. 400 e-111
Alignment gi|NP_001093242.1| cytochrome P450 4B1 isoform a [Homo sapiens]. 257 1e-68
Alignment gi|NP_000770.2| cytochrome P450 4B1 isoform b [Homo sapiens]. 257 1e-68
Alignment gi|NP_828847.1| cytochrome P450 4X1 [Homo sapiens]. 252 3e-67
Alignment gi|NP_835235.1| cytochrome P450 4Z1 [Homo sapiens]. 252 3e-67
Alignment gi|NP_001122404.1| cytochrome P450 4F11 [Homo sapiens]. 211 1e-54
Alignment gi|NP_067010.3| cytochrome P450 4F11 [Homo sapiens]. 211 1e-54
Alignment gi|NP_000887.2| leukotriene-B(4) omega-hydroxylase 2 isoform a ... 197 1e-50
Alignment gi|NP_001073.3| leukotriene-B(4) omega-hydroxylase 1 [Homo sapi... 194 1e-49
>ref|NP_000769.2| cytochrome P450 4A11 [Homo sapiens].
Length = 519
Score = 421 bits (1082), Expect = e-118
Identities = 203/292 (69%), Positives = 235/292 (80%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL RQWLLKALQQFP PPSHWL+GH +E Q++ ELQ + K VE +PSAC WLWG + V
Sbjct: 38 YLHRQWLLKALQQFPCPPSHWLFGHIQELQQDQELQRIQKWVETFPSACPHWLWGGKVRV 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
+YDPDYMKV+L RSDPK+ YR L PWIG GLLLLNGQTWFQ RRMLTPAFHYDILKP
Sbjct: 98 QLYDPDYMKVILGRSDPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKP 157
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVGLMA SV+VMLDKWE+L+ QD LE+ VSLMTLDTIMKCAFSHQGS+Q D +S SY
Sbjct: 158 YVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSHQGSIQVDRNSQSY 217
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI DL NL +R ++AF QND IY L+ HRA ++AHQHTD+VIQLRKAQLQK+
Sbjct: 218 IQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTDQVIQLRKAQLQKE 277
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++E +++KRHLDFL+ILLLA+ME G+ LSD DL EVDTFMFE H TASG
Sbjct: 278 GELEKIKRKRHLDFLDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASG 329
>ref|NP_001010969.2| cytochrome P450 4A22 precursor [Homo sapiens].
Length = 519
Score = 400 bits (1027), Expect = e-111
Identities = 195/292 (66%), Positives = 231/292 (79%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YL RQWLLKALQQFP PPSHWL+GH +EFQ + ELQ + +RV+ +PSAC W+WG + V
Sbjct: 38 YLHRQWLLKALQQFPCPPSHWLFGHIQEFQHDQELQRIQERVKTFPSACPYWIWGGKVRV 97
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
+YDPDYMKV+L RSDPK+ Y+ L P IG GLLLLNGQTWFQ RRMLTPAFH DILKP
Sbjct: 98 QLYDPDYMKVILGRSDPKSHGSYKFLAPRIGYGLLLLNGQTWFQHRRMLTPAFHNDILKP 157
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
YVGLMA SV+VMLDKWE+L+ QD LE+ VSLMTLDTIMK AFSHQGS+Q D +S SY
Sbjct: 158 YVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKSAFSHQGSIQVDRNSQSY 217
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
IQAI DL +L ++AF +ND IY L+ HRA ++AHQHTD+VIQLRKAQLQK+
Sbjct: 218 IQAISDLNSLVFCCMRNAFHENDTIYSLTSAGRWTHRACQLAHQHTDQVIQLRKAQLQKE 277
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
G++E +++KRHLDFL+ILLLA+ME G+ LSD DL EVDTFMFE H TASG
Sbjct: 278 GELEKIKRKRHLDFLDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASG 329
>ref|NP_001093242.1| cytochrome P450 4B1 isoform a [Homo sapiens].
Length = 512
Score = 257 bits (657), Expect = 1e-68
Identities = 130/291 (44%), Positives = 172/291 (59%)
Frame = +2
Query: 134 LRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVL 313
LRRQ L KA+ +FP PP+HWL+GH+ E QE L ++ ++P A W +
Sbjct: 34 LRRQTLAKAMDKFPGPPTHWLFGHALEIQETGSLDKVVSWAHQFPYAHPLWFGQFIGFLN 93
Query: 314 VYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPY 493
+Y+PDY K V +R DPK VY + WIG GLL+L G W Q R++LTP FHYD+LKPY
Sbjct: 94 IYEPDYAKAVYSRGDPKAPDVYDFFLQWIGRGLLVLEGPKWLQHRKLLTPGFHYDVLKPY 153
Query: 494 VGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYI 673
V + +S ++MLDKWE+ + +I V M L+T+MKC F + SY
Sbjct: 154 VAVFTESTRIMLDKWEEKAREGKSFDIFCDVGHMALNTLMKCTFGRGDTGLGHSRDSSYY 213
Query: 674 QAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQG 853
A+ DL L R S ND IY L+P + RA ++AH HTD+VI+ RKA LQ +
Sbjct: 214 LAVSDLTLLMQQRLVSFQYHNDFIYWLTPHGRRFLRACQVAHDHTDQVIRERKAALQDEK 273
Query: 854 KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ ++ +RHLDFL+ILL A+ E LSD DL EVDTFMFE H T SG
Sbjct: 274 VRKKIQNRRHLDFLDILLGARDEDDIKLSDADLRAEVDTFMFEGHDTTTSG 324
>ref|NP_000770.2| cytochrome P450 4B1 isoform b [Homo sapiens].
Length = 511
Score = 257 bits (656), Expect = 1e-68
Identities = 131/291 (45%), Positives = 173/291 (59%)
Frame = +2
Query: 134 LRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMVL 313
LRRQ L KA+ +FP PP+HWL+GH+ E QE L ++ ++P A W +
Sbjct: 34 LRRQTLAKAMDKFPGPPTHWLFGHALEIQETGSLDKVVSWAHQFPYAHPLWFGQFIGFLN 93
Query: 314 VYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPY 493
+Y+PDY K V +R DPK VY + WIG GLL+L G W Q R++LTP FHYD+LKPY
Sbjct: 94 IYEPDYAKAVYSRGDPKAPDVYDFFLQWIGRGLLVLEGPKWLQHRKLLTPGFHYDVLKPY 153
Query: 494 VGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYI 673
V + +S ++MLDKWE+ + +I V M L+T+MKC F +G SY
Sbjct: 154 VAVFTESTRIMLDKWEEKAREGKSFDIFCDVGHMALNTLMKCTFG-RGDTGLGHRDSSYY 212
Query: 674 QAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQG 853
A+ DL L R S ND IY L+P + RA ++AH HTD+VI+ RKA LQ +
Sbjct: 213 LAVSDLTLLMQQRLVSFQYHNDFIYWLTPHGRRFLRACQVAHDHTDQVIRERKAALQDEK 272
Query: 854 KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
+ ++ +RHLDFL+ILL A+ E LSD DL EVDTFMFE H T SG
Sbjct: 273 VRKKIQNRRHLDFLDILLGARDEDDIKLSDADLRAEVDTFMFEGHDTTTSG 323
>ref|NP_828847.1| cytochrome P450 4X1 [Homo sapiens].
Length = 509
Score = 252 bits (644), Expect = 3e-67
Identities = 124/292 (42%), Positives = 192/292 (65%), Gaps = 1/292 (0%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
YLRRQ LL+ L+ FP+PP+HW GH + Q+++ ++ L + +EKYP A W+ +A
Sbjct: 33 YLRRQRLLRDLRPFPAPPTHWFLGHQKFIQDDN-MEKLEEIIEKYPRAFPFWIGPFQAFF 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
+YDPDY K +L+R+DPK+ + + P +G GL L+G WFQ RR+LTP FH++ILK
Sbjct: 92 CIYDPDYAKTLLSRTDPKSQYLQKFSPPLLGKGLAALDGPKWFQHRRLLTPGFHFNILKA 151
Query: 491 YVGLMAKSVQVMLDKWEQLVA-QDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHS 667
Y+ +MA SV++MLDKWE++ + QD +E+ ++ M+LD IMKCAFS + + QT+
Sbjct: 152 YIEVMAHSVKMMLDKWEKICSTQDTSVEVYEHINSMSLDIIMKCAFSKETNCQTNSTHDP 211
Query: 668 YIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQK 847
Y +AI++L + R S +DII++LSP+ ++ + +R+ +Q+TD +IQ RK LQ
Sbjct: 212 YAKAIFELSKIIFHRLYSLLYHSDIIFKLSPQGYRFQKLSRVLNQYTDTIIQERKKSLQA 271
Query: 848 QGKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTAS 1003
K +N K+++ DFL+I+L A+ E G+S SD D+ EV TF+ H A+
Sbjct: 272 GVKQDNTPKRKYQDFLDIVLSAKDESGSSFSDIDVHSEVSTFLLAGHDTLAA 323
>ref|NP_835235.1| cytochrome P450 4Z1 [Homo sapiens].
Length = 505
Score = 252 bits (644), Expect = 3e-67
Identities = 124/291 (42%), Positives = 190/291 (65%)
Frame = +2
Query: 131 YLRRQWLLKALQQFPSPPSHWLYGHSREFQEESELQPLLKRVEKYPSACARWLWGTRAMV 310
Y RR+W+++AL FP+PP+HW YGH +EF E + K +EKYP A W+
Sbjct: 33 YQRRRWMIRALHLFPAPPAHWFYGH-KEFYPVKEFEVYHKLMEKYPCAVPLWVGPFTMFF 91
Query: 311 LVYDPDYMKVVLARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKP 490
V+DPDY K++L R DPK++V +++L W+G GL+ L+G W + R+++ P F+ ILK
Sbjct: 92 SVHDPDYAKILLKRQDPKSAVSHKILESWVGRGLVTLDGSKWKKHRQIVKPGFNISILKI 151
Query: 491 YVGLMAKSVQVMLDKWEQLVAQDPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSY 670
++ +M++SV++ML+KWE+ +AQ+ RLE+ VSLMTLD+IMKCAFSHQGS+Q D SY
Sbjct: 152 FITMMSESVRMMLNKWEEHIAQNSRLELFQHVSLMTLDSIMKCAFSHQGSIQLDSTLDSY 211
Query: 671 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQ 850
++A+++L + + R + ND++++ S + + + HQ T++VIQ RK L+ +
Sbjct: 212 LKAVFNLSKISNQRMNNFLHHNDLVFKFSSQGQIFSKFNQELHQFTEKVIQDRKESLKDK 271
Query: 851 GKMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTAS 1003
K + +K+R DFL+ILL A+ E S+ DL EV TFMF H T+S
Sbjct: 272 LKQDTTQKRR-WDFLDILLSAKSENTKDFSEADLQAEVKTFMFAGHDTTSS 321
>ref|NP_001122404.1| cytochrome P450 4F11 [Homo sapiens].
Length = 524
Score = 211 bits (536), Expect = 1e-54
Identities = 117/293 (39%), Positives = 167/293 (56%), Gaps = 9/293 (3%)
Frame = +2
Query: 155 KALQQFPSPPS-HWLYGHSREFQEESE-LQPLLKRVEKYPSACARWLWGTRAMVLVYDPD 328
+ LQ FP PP +W +GH E ++ L + V YP WL T ++++ PD
Sbjct: 46 RRLQCFPQPPKQNWFWGHQGLVTPTEEGMKTLTQLVTTYPQGFKLWLGPTFPLLILCHPD 105
Query: 329 YMKVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVG 499
++ + + S PK + Y L PW+G GLLL G W + RRMLTPAFH++ILKPY+
Sbjct: 106 IIRPITSASAAVAPKDMIFYGFLKPWLGDGLLLSGGDKWSRHRRMLTPAFHFNILKPYMK 165
Query: 500 LMAKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQ 676
+ KSV +M DKW++L ++ RL++ +SLMTLD++ KC FS + + Q YI
Sbjct: 166 IFNKSVNIMHDKWQRLASEGSARLDMFEHISLMTLDSLQKCVFSFESNCQE--KPSEYIA 223
Query: 677 AIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQG- 853
AI +L R + L D +Y L+P+ + RA + H TD VIQ R+ L QG
Sbjct: 224 AILELSAFVEKRNQQILLHTDFLYYLTPDGQRFRRACHLVHDFTDAVIQERRCTLPTQGI 283
Query: 854 --KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++N K + LDF+++LLL++ E G LSD D+ E DTFMFE H TASG
Sbjct: 284 DDFLKNKAKSKTLDFIDVLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASG 336
>ref|NP_067010.3| cytochrome P450 4F11 [Homo sapiens].
Length = 524
Score = 211 bits (536), Expect = 1e-54
Identities = 117/293 (39%), Positives = 167/293 (56%), Gaps = 9/293 (3%)
Frame = +2
Query: 155 KALQQFPSPPS-HWLYGHSREFQEESE-LQPLLKRVEKYPSACARWLWGTRAMVLVYDPD 328
+ LQ FP PP +W +GH E ++ L + V YP WL T ++++ PD
Sbjct: 46 RRLQCFPQPPKQNWFWGHQGLVTPTEEGMKTLTQLVTTYPQGFKLWLGPTFPLLILCHPD 105
Query: 329 YMKVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVG 499
++ + + S PK + Y L PW+G GLLL G W + RRMLTPAFH++ILKPY+
Sbjct: 106 IIRPITSASAAVAPKDMIFYGFLKPWLGDGLLLSGGDKWSRHRRMLTPAFHFNILKPYMK 165
Query: 500 LMAKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQ 676
+ KSV +M DKW++L ++ RL++ +SLMTLD++ KC FS + + Q YI
Sbjct: 166 IFNKSVNIMHDKWQRLASEGSARLDMFEHISLMTLDSLQKCVFSFESNCQE--KPSEYIA 223
Query: 677 AIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQG- 853
AI +L R + L D +Y L+P+ + RA + H TD VIQ R+ L QG
Sbjct: 224 AILELSAFVEKRNQQILLHTDFLYYLTPDGQRFRRACHLVHDFTDAVIQERRCTLPTQGI 283
Query: 854 --KMENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++N K + LDF+++LLL++ E G LSD D+ E DTFMFE H TASG
Sbjct: 284 DDFLKNKAKSKTLDFIDVLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASG 336
>ref|NP_000887.2| leukotriene-B(4) omega-hydroxylase 2 isoform a [Homo sapiens].
Length = 520
Score = 197 bits (501), Expect = 1e-50
Identities = 117/291 (40%), Positives = 160/291 (54%), Gaps = 9/291 (3%)
Frame = +2
Query: 161 LQQFPSPPS-HWLYGHSREFQEESE-LQPLLKRVEKYPSACARWLWGTRAMVLVYDPDYM 334
L+ FP PP +W GH E L + C W+ A+V ++ P Y+
Sbjct: 48 LRCFPQPPKRNWFLGHLGLIHSSEEGLLYTQSLACTFGDMCCWWVGPWHAIVRIFHPTYI 107
Query: 335 KVVL---ARSDPKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLM 505
K VL A PK V Y L PW+G GLLL G+ W + RRMLTPAFH++ILKPY+ +
Sbjct: 108 KPVLFAPAAIVPKDKVFYSFLKPWLGDGLLLSAGEKWSRHRRMLTPAFHFNILKPYMKIF 167
Query: 506 AKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAI 682
+SV +M KW+ L ++ RL++ +SLMTLD++ KC FS Q YI AI
Sbjct: 168 NESVNIMHAKWQLLASEGSARLDMFEHISLMTLDSLQKCVFSFDSHCQE--KPSEYIAAI 225
Query: 683 WDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGK-- 856
+L L + R + L D +Y L+P+ + RA R+ H TD VIQ R+ L QG
Sbjct: 226 LELSALVTKRHQQILLYIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDD 285
Query: 857 -MENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K + LDF+++LLL++ E G LSD D+ E DTFMFE H TASG
Sbjct: 286 FLQAKAKSKTLDFIDVLLLSKDEDGKKLSDEDIRAEADTFMFEGHDTTASG 336
>ref|NP_001073.3| leukotriene-B(4) omega-hydroxylase 1 [Homo sapiens].
Length = 520
Score = 194 bits (492), Expect = 1e-49
Identities = 114/293 (38%), Positives = 160/293 (54%), Gaps = 9/293 (3%)
Frame = +2
Query: 155 KALQQFPSPPS-HWLYGHSREFQEESE-LQPLLKRVEKYPSACARWLWGTRAMVLVYDPD 328
+ L+ FP PP +W +GH E ++ L + V YP W+ ++ + PD
Sbjct: 46 RRLRCFPQPPRRNWFWGHQGMVNPTEEGMRVLTQLVATYPQGFKVWMGPISPLLSLCHPD 105
Query: 329 YMKVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVG 499
++ V+ S PK Y L PW+G GLLL G W + RRMLTPAFH++ILKPY+
Sbjct: 106 IIRSVINASAAIAPKDKFFYSFLEPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMK 165
Query: 500 LMAKSVQVMLDKWEQLVAQDPR-LEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQ 676
+ +SV +M KW+ L ++ L++ +SLMTLD++ KC FS Q YI
Sbjct: 166 IFNESVNIMHAKWQLLASEGSACLDMFEHISLMTLDSLQKCVFSFDSHCQE--KPSEYIA 223
Query: 677 AIWDLKNLFSTRTKSAFLQNDIIYRLSPESHKNHRAARIAHQHTDRVIQLRKAQLQKQGK 856
AI +L L S R L D +Y L+P+ + RA R+ H TD VIQ R+ L QG
Sbjct: 224 AILELSALVSKRHHEILLHIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGV 283
Query: 857 ---MENVRKKRHLDFLNILLLAQMEKGNSLSDTDLPCEVDTFMFEXHXHTASG 1006
++ K + LDF+++LLL++ E G LSD D+ E DTFMFE H TASG
Sbjct: 284 DDFLQAKAKSKTLDFIDVLLLSKDEDGKKLSDEDIRAEADTFMFEGHDTTASG 336
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 40,455,086
Number of extensions: 1088152
Number of successful extensions: 4160
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4111
Number of HSP's successfully gapped: 16
Length of query: 336
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 233
Effective length of database: 14,901,872
Effective search space: 3472136176
Effective search space used: 3472136176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-007964
(1008 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 416 e-114
gb|GL892328.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 86 4e-14
>Sscrofa_Chr06
|| Length = 157765593
Score = 416 bits (210), Expect = e-114
Identities = 213/214 (99%)
Strand = Plus / Minus
Query: 1 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152153726 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 152153667
Query: 61 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctacttctcctcaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152153666 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctacttctcctcaaggc 152153607
Query: 121 agcacagctctacctgcgcaggcagtggctgctcaaagccctccagcagttcccgtcccc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 152153606 agcacagctctacctgcgcagacagtggctgctcaaagccctccagcagttcccgtcccc 152153547
Query: 181 tccttcccactggctctatggacacagcagggag 214
||||||||||||||||||||||||||||||||||
Sbjct: 152153546 tccttcccactggctctatggacacagcagggag 152153513
Score = 408 bits (206), Expect = e-111
Identities = 212/214 (99%)
Strand = Plus / Plus
Query: 1 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152189982 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 152190041
Query: 61 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctacttctcctcaaggc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152190042 tatctctgggctcctgcaggtggcctccctgctcgggctgctgctacttctcctcaaggc 152190101
Query: 121 agcacagctctacctgcgcaggcagtggctgctcaaagccctccagcagttcccgtcccc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 152190102 agcacagctctacctgcgcagacagtggctgctcaaagccctccagcagttcccgtcccc 152190161
Query: 181 tccttcccactggctctatggacacagcagggag 214
||||||||||||||||||||||||||||||||||
Sbjct: 152190162 tccttcccactggctctatggacacagcagggag 152190195
Score = 392 bits (198), Expect = e-106
Identities = 210/214 (98%)
Strand = Plus / Minus
Query: 1 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151927005 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 151926946
Query: 61 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctacttctcctcaaggc 120
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 151926945 tgcctctgggctcctgcaggtggcctccctgctcgggctgctgctgcttctcctcaaggc 151926886
Query: 121 agcacagctctacctgcgcaggcagtggctgctcaaagccctccagcagttcccgtcccc 180
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 151926885 agcacagctctacctgcacagacagtggctgctcaaagccctccagcagttcccgtcccc 151926826
Query: 181 tccttcccactggctctatggacacagcagggag 214
||||||||||||||||||||||||||||||||||
Sbjct: 151926825 tccttcccactggctctatggacacagcagggag 151926792
Score = 392 bits (198), Expect = e-106
Identities = 210/214 (98%)
Strand = Plus / Minus
Query: 1 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152031955 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 152031896
Query: 61 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctacttctcctcaaggc 120
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 152031895 tgcctctgggctcctgcaggtggcctccctgctcgggctgctgctgcttctcctcaaggc 152031836
Query: 121 agcacagctctacctgcgcaggcagtggctgctcaaagccctccagcagttcccgtcccc 180
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 152031835 agcacagctctacctgcacagacagtggctgctcaaagccctccagcagttcccgtcccc 152031776
Query: 181 tccttcccactggctctatggacacagcagggag 214
||||||||||||||||||||||||||||||||||
Sbjct: 152031775 tccttcccactggctctatggacacagcagggag 152031742
Score = 392 bits (198), Expect = e-106
Identities = 211/214 (98%), Gaps = 1/214 (0%)
Strand = Plus / Plus
Query: 1 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 152125539 agtcagggacagtcagccatccagaagccc-tgcaccatgacggtccctgccctggccag 152125597
Query: 61 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctacttctcctcaaggc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 152125598 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctgcttctcctcaaggc 152125657
Query: 121 agcacagctctacctgcgcaggcagtggctgctcaaagccctccagcagttcccgtcccc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 152125658 agcacagctctacctgcgcagacagtggctgctcaaagccctccagcagttcccgtcccc 152125717
Query: 181 tccttcccactggctctatggacacagcagggag 214
||||||||||||||||||||||||||||||||||
Sbjct: 152125718 tccttcccactggctctatggacacagcagggag 152125751
Score = 385 bits (194), Expect = e-104
Identities = 210/214 (98%), Gaps = 1/214 (0%)
Strand = Plus / Plus
Query: 1 agtcagggacagtcagccatccagaagcccgtgcaccatgacggtccctgccctggccag 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 152012738 agtcagggacagtcagccatccagaagccc-tgcaccatgacggtccctgccctggccag 152012796
Query: 61 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctacttctcctcaaggc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 152012797 tgtctctgggctcctgcaggtggcctccctgctcgggctgctgctgcttctcctcaaggc 152012856
Query: 121 agcacagctctacctgcgcaggcagtggctgctcaaagccctccagcagttcccgtcccc 180
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 152012857 agcacagctctacctgcacagacagtggctgctcaaagccctccagcagttcccgtcccc 152012916
Query: 181 tccttcccactggctctatggacacagcagggag 214
||||||||||||||||||||||||||||||||||
Sbjct: 152012917 tccttcccactggctctatggacacagcagggag 152012950
Score = 285 bits (144), Expect = 2e-74
Identities = 153/156 (98%)
Strand = Plus / Plus
Query: 654 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgta 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152001053 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgta 152001112
Query: 714 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaaagccataaga 773
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 152001113 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaaggccgtaaga 152001172
Query: 774 accaccgtgccgccaggatagcccatcaacacacag 809
|||||||||||||||||||||||||||||||||||
Sbjct: 152001173 gccaccgtgccgccaggatagcccatcaacacacag 152001208
Score = 285 bits (144), Expect = 2e-74
Identities = 153/156 (98%)
Strand = Plus / Plus
Query: 654 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgta 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152136677 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgta 152136736
Query: 714 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaaagccataaga 773
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 152136737 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaaggccgtaaga 152136796
Query: 774 accaccgtgccgccaggatagcccatcaacacacag 809
|||||||||||||||||||||||||||||||||||
Sbjct: 152136797 gccaccgtgccgccaggatagcccatcaacacacag 152136832
Score = 285 bits (144), Expect = 2e-74
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 213 agtttcaagaggaaagcgagctgcaacccctcctgaaaagggtagagaaatacccaagtg 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152197327 agtttcaagaggaaagcgagctgcaacccctcctgaaaagggtagagaaatacccaagtg 152197386
Query: 273 cctgtgctcgctggctgtggggaacaagagccatggtactggtctatgaccctgactaca 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152197387 cctgtgctcgctggctgtggggaacaagagccatggtactggtctatgaccctgactaca 152197446
Query: 333 tgaaggtggtcctggcgagatcag 356
||||||||||||||||||||||||
Sbjct: 152197447 tgaaggtggtcctggcgagatcag 152197470
Score = 280 bits (141), Expect = 1e-72
Identities = 147/149 (98%)
Strand = Plus / Minus
Query: 661 ccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgtacgaagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152166259 ccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgtacgaagag 152166200
Query: 721 tgcctttctccagaatgacatcatctacaggctgagccctgaaagccataagaaccaccg 780
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 152166199 tgcctttctccagaatgacatcatctacaggctgagccctgaaggccgtaagaaccaccg 152166140
Query: 781 tgccgccaggatagcccatcaacacacag 809
|||||||||||||||||||||||||||||
Sbjct: 152166139 tgccgccaggatagcccatcaacacacag 152166111
Score = 278 bits (140), Expect = 6e-72
Identities = 152/156 (97%)
Strand = Plus / Minus
Query: 654 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgta 713
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 152044440 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctatccgca 152044381
Query: 714 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaaagccataaga 773
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 152044380 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaaggccgtaaga 152044321
Query: 774 accaccgtgccgccaggatagcccatcaacacacag 809
||||||||||||||||||||||||||||||||||||
Sbjct: 152044320 accaccgtgccgccaggatagcccatcaacacacag 152044285
Score = 278 bits (140), Expect = 6e-72
Identities = 152/156 (97%)
Strand = Plus / Plus
Query: 654 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgta 713
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 152106934 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctatccgca 152106993
Query: 714 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaaagccataaga 773
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 152106994 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaaggccgtaaga 152107053
Query: 774 accaccgtgccgccaggatagcccatcaacacacag 809
||||||||||||||||||||||||||||||||||||
Sbjct: 152107054 accaccgtgccgccaggatagcccatcaacacacag 152107089
Score = 262 bits (132), Expect = 3e-67
Identities = 141/144 (97%)
Strand = Plus / Minus
Query: 213 agtttcaagaggaaagcgagctgcaacccctcctgaaaagggtagagaaatacccaagtg 272
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 152047397 agtttcaagaggaaagcgagctgccacccctcctgaaaagggtagagaaatacccaagtg 152047338
Query: 273 cctgtgctcgctggctgtggggaacaagagccatggtactggtctatgaccctgactaca 332
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152047337 cctgtgctctctggcggtggggaacaagagccatggtactggtctatgaccctgactaca 152047278
Query: 333 tgaaggtggtcctggcgagatcag 356
||||||||||||||||||||||||
Sbjct: 152047277 tgaaggtggtcctggcgagatcag 152047254
Score = 262 bits (132), Expect = 3e-67
Identities = 141/144 (97%)
Strand = Plus / Plus
Query: 213 agtttcaagaggaaagcgagctgcaacccctcctgaaaagggtagagaaatacccaagtg 272
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 152133725 agtttcaagaggaaagcgagctgccacccctcctgaaaagggtagagaaatacccaagtg 152133784
Query: 273 cctgtgctcgctggctgtggggaacaagagccatggtactggtctatgaccctgactaca 332
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152133785 cctgtgctctctggcggtggggaacaagagccatggtactggtctatgaccctgactaca 152133844
Query: 333 tgaaggtggtcctggcgagatcag 356
||||||||||||||||||||||||
Sbjct: 152133845 tgaaggtggtcctggcgagatcag 152133868
Score = 258 bits (130), Expect = 5e-66
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 401 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151999436 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 151999495
Query: 461 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151999496 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 151999555
Query: 521 gtgatgctgg 530
||||||||||
Sbjct: 151999556 gtgatgctgg 151999565
Score = 258 bits (130), Expect = 5e-66
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 401 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152046063 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 152046004
Query: 461 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152046003 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 152045944
Query: 521 gtgatgctgg 530
||||||||||
Sbjct: 152045943 gtgatgctgg 152045934
Score = 258 bits (130), Expect = 5e-66
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 401 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152105317 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 152105376
Query: 461 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152105377 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 152105436
Query: 521 gtgatgctgg 530
||||||||||
Sbjct: 152105437 gtgatgctgg 152105446
Score = 258 bits (130), Expect = 5e-66
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 401 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152135060 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 152135119
Query: 461 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152135120 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 152135179
Query: 521 gtgatgctgg 530
||||||||||
Sbjct: 152135180 gtgatgctgg 152135189
Score = 252 bits (127), Expect = 3e-64
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 529 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152106439 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 152106498
Query: 589 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152106499 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 152106558
Query: 649 agacggg 655
|||||||
Sbjct: 152106559 agacggg 152106565
Score = 252 bits (127), Expect = 3e-64
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 529 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152136182 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 152136241
Query: 589 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152136242 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 152136301
Query: 649 agacggg 655
|||||||
Sbjct: 152136302 agacggg 152136308
Score = 244 bits (123), Expect = 8e-62
Identities = 126/127 (99%)
Strand = Plus / Minus
Query: 529 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151939754 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 151939695
Query: 589 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 648
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 151939694 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgcccagac 151939635
Query: 649 agacggg 655
|||||||
Sbjct: 151939634 agacggg 151939628
Score = 244 bits (123), Expect = 8e-62
Identities = 126/127 (99%)
Strand = Plus / Minus
Query: 529 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152044935 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 152044876
Query: 589 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 648
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 152044875 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgcccagac 152044816
Query: 649 agacggg 655
|||||||
Sbjct: 152044815 agacggg 152044809
Score = 244 bits (123), Expect = 8e-62
Identities = 126/127 (99%)
Strand = Plus / Plus
Query: 529 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152177069 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 152177128
Query: 589 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152177129 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 152177188
Query: 649 agacggg 655
||||||
Sbjct: 152177189 tgacggg 152177195
Score = 242 bits (122), Expect = 3e-61
Identities = 128/130 (98%)
Strand = Plus / Plus
Query: 401 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 460
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 152198662 ggctgtggtttgctcctgttgaatgggcagatgtggttccagcgtcggcggatgctgacc 152198721
Query: 461 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 520
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152198722 ccagctttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 152198781
Query: 521 gtgatgctgg 530
||||||||||
Sbjct: 152198782 gtgatgctgg 152198791
Score = 236 bits (119), Expect = 2e-59
Identities = 125/127 (98%)
Strand = Plus / Plus
Query: 529 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152000558 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 152000617
Query: 589 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 648
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 152000618 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcacccagac 152000677
Query: 649 agacggg 655
|||||||
Sbjct: 152000678 agacggg 152000684
Score = 236 bits (119), Expect = 2e-59
Identities = 125/127 (98%)
Strand = Plus / Plus
Query: 529 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 588
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 152199801 ggacaagtgggagcagctcgtcgcccaggacccacatctggagatcgtgggacccgtctc 152199860
Query: 589 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 648
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 152199861 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgcccagac 152199920
Query: 649 agacggg 655
|||||||
Sbjct: 152199921 agacggg 152199927
Score = 224 bits (113), Expect = 7e-56
Identities = 152/165 (92%)
Strand = Plus / Plus
Query: 50 gccctggccagtgtctctgggctcctgcaggtggcctccctgctcgggctgctgctactt 109
||||||| |||||||||||||||||||||||||||||| || |||||||||| || |||
Sbjct: 119141350 gccctgggcagtgtctctgggctcctgcaggtggcctcggtgttcgggctgctcctgctt 119141409
Query: 110 ctcctcaaggcagcacagctctacctgcgcaggcagtggctgctcaaagccctccagcag 169
|| ||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 119141410 ctgctcaaggcaacacagctctacctgcacagacagtggctgctcaaagcccttcagcag 119141469
Query: 170 ttcccgtcccctccttcccactggctctatggacacagcagggag 214
||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 119141470 ttcccatcccctccttcccactggctctatggacacagccgggag 119141514
Score = 198 bits (100), Expect = 4e-48
Identities = 133/144 (92%)
Strand = Plus / Plus
Query: 213 agtttcaagaggaaagcgagctgcaacccctcctgaaaagggtagagaaatacccaagtg 272
|||||||||||||| | |||| |||| | |||||||||||| ||| ||||||||||||||
Sbjct: 152029559 agtttcaagaggaaggtgagcagcaatcactcctgaaaaggatagggaaatacccaagtg 152029618
Query: 273 cctgtgctcgctggctgtggggaacaagagccatggtactggtctatgaccctgactaca 332
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152029619 cctgtgctcgctggagatggggaacaagagccttggtactggtctatgaccctgactaca 152029678
Query: 333 tgaaggtggtcctggcgagatcag 356
||||||||||||||||||||||||
Sbjct: 152029679 tgaaggtggtcctggcgagatcag 152029702
Score = 198 bits (100), Expect = 4e-48
Identities = 133/144 (92%)
Strand = Plus / Plus
Query: 213 agtttcaagaggaaagcgagctgcaacccctcctgaaaagggtagagaaatacccaagtg 272
|||||||| ||||| | |||| |||| | |||||||||||| ||||||||||||||||||
Sbjct: 152103982 agtttcaacaggaaggtgagcagcaatcactcctgaaaaggatagagaaatacccaagtg 152104041
Query: 273 cctgtgctcgctggctgtggggaacaagagccatggtactggtctatgaccctgactaca 332
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152104042 cctgtgctcgctggagatggggaacaagagccatggtactggtctatgaccctgactaca 152104101
Query: 333 tgaaggtggtcctggcgagatcag 356
|||||||||||||||| |||||||
Sbjct: 152104102 tgaaggtggtcctggcaagatcag 152104125
Score = 196 bits (99), Expect = 2e-47
Identities = 108/111 (97%)
Strand = Plus / Plus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 152001637 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggagagatggagaac 152001696
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgcccaa 916
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 152001697 gtgaggaagaagaggcacttggatttcctggacatcctcctccttgcccaa 152001747
Score = 196 bits (99), Expect = 2e-47
Identities = 108/111 (97%)
Strand = Plus / Plus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 152137261 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggagagatggagaac 152137320
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgcccaa 916
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 152137321 gtgaggaagaagaggcacttggatttcctggacatcctcctccttgcccaa 152137371
Score = 196 bits (99), Expect = 2e-47
Identities = 108/111 (97%)
Strand = Plus / Plus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 152178105 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggagagatggagaac 152178164
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgcccaa 916
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 152178165 gtgaggaagaagaggcacttggatttcctggacatcctcctccttgcccaa 152178215
Score = 192 bits (97), Expect = 3e-46
Identities = 106/109 (97%)
Strand = Plus / Minus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 152043868 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggagagatggagaac 152043809
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgccc 914
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 152043808 gtgaggaagaagaggcacttggatttcctggacatcctcctccttgccc 152043760
Score = 192 bits (97), Expect = 3e-46
Identities = 106/109 (97%)
Strand = Plus / Minus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 152165682 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggagagatggagaac 152165623
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgccc 914
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 152165622 gtgaggaagaagaggcacttggatttcctggacatcctcctccttgccc 152165574
Score = 188 bits (95), Expect = 4e-45
Identities = 107/111 (96%)
Strand = Plus / Minus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||
Sbjct: 151938664 acagaccgagtgatccagctgaggaaggcgcagctgcaaaagcagggagagatggagaac 151938605
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgcccaa 916
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 151938604 gtgaggaagaagaggcacttggatttcctggacatcctcctccttgcccaa 151938554
Score = 180 bits (91), Expect = 1e-42
Identities = 109/115 (94%)
Strand = Plus / Plus
Query: 242 ctcctgaaaagggtagagaaatacccaagtgcctgtgctcgctggctgtggggaacaaga 301
|||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 152174705 ctcctgaaaaggatagggaaatacccaagtgcctgtgctcgctggagatggggaacaaga 152174764
Query: 302 gccatggtactggtctatgaccctgactacatgaaggtggtcctggcgagatcag 356
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152174765 gccttggtactggtctatgaccctgactacatgaaggtggtcctggcgagatcag 152174819
Score = 161 bits (81), Expect = 9e-37
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
|||||||||||||||||| || |||||||||| |||||||||||||| | |||||||||
Sbjct: 152107506 acagaccgagtgatccagttgaagaaggcgcaggtgcaaaagcagggagagatggagaac 152107565
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgccc 914
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 152107566 gtgaggaagaagaggcacttggatttcctggacatcctcctccttgccc 152107614
Score = 161 bits (81), Expect = 9e-37
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
|||||||||||||||||| || |||||||||| |||||||||||||| | |||||||||
Sbjct: 152108683 acagaccgagtgatccagttgaagaaggcgcaggtgcaaaagcagggagagatggagaac 152108742
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgccc 914
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 152108743 gtgaggaagaagaggcacttggatttcctggacatcctcctccttgccc 152108791
Score = 157 bits (79), Expect = 1e-35
Identities = 112/123 (91%)
Strand = Plus / Plus
Query: 529 ggacaagtgggagcagctcgtcgcccaggacccacgtctggagatcgtgggacccgtctc 588
|||||| ||||||||||| ||| |||||||| ||| |||||||||| | |||| ||||||
Sbjct: 119150572 ggacaaatgggagcagcttgtcacccaggactcacatctggagatctttggacacgtctc 119150631
Query: 589 cttgatgaccctggacaccatcatgaagtgcgccttcagccaccagggcagcgtccagac 648
||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||
Sbjct: 119150632 cttgatgaccctggacaccgtcatgaagtgtgccttcagctaccagggcagcgtccagac 119150691
Query: 649 aga 651
|||
Sbjct: 119150692 aga 119150694
Score = 155 bits (78), Expect = 6e-35
Identities = 102/110 (92%)
Strand = Plus / Plus
Query: 654 gggattcccactcctacatccaggccatttgggatctcaaaaatctcttttctacccgta 713
|||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||||
Sbjct: 152200296 gggattcccagtcctacatccaggccatttgggatctcaaaaatctcattttttcccgct 152200355
Query: 714 cgaagagtgcctttctccagaatgacatcatctacaggctgagccctgaa 763
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152200356 tgaggagtgcctttctccagaatgacatcatctacaggctgagccctgaa 152200405
Score = 145 bits (73), Expect = 5e-32
Identities = 109/121 (90%)
Strand = Plus / Plus
Query: 410 ttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgaccccagccttc 469
|||||||||||| |||| ||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 152175978 ttgctcctgttggatggacaggcgtggttccagcaccggcggatgctgaccccagccttc 152176037
Query: 470 cactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaagtgatgctg 529
|| |||||||||||||||||||||| ||||||||||| | |||||||| |||||||||
Sbjct: 152176038 catcatgacatcctgaagccctacgtgcgtctcatggccgactctgtccaggtgatgctg 152176097
Query: 530 g 530
|
Sbjct: 152176098 g 152176098
Score = 139 bits (70), Expect = 3e-30
Identities = 115/130 (88%)
Strand = Plus / Plus
Query: 401 ggctgtggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgacc 460
|||| |||||||||||| | | |||||||||| |||||||||| |||||||||||||||
Sbjct: 119149497 ggctatggtttgctcctatcggatgggcagacatggttccagcaccggcggatgctgacc 119149556
Query: 461 ccagccttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaa 520
|||||||||||||||||||||||||||||||| || |||||||||| | |||||| |
Sbjct: 119149557 ccagccttccactatgacatcctgaagccctatgtgaatctcatggccgactctgtcaag 119149616
Query: 521 gtgatgctgg 530
||||||||||
Sbjct: 119149617 gtgatgctgg 119149626
Score = 117 bits (59), Expect = 1e-23
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtg-cgaagtggacacgttcat 975
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 152001832 atggagaaggggaacagcttgtcggacaccgacct-ccgtgccgaagtggacacgttcat 152001890
Query: 976 gttcgaggntcatgnacacacagccagtggcat 1008
|||||||| ||||| |||||||||||||||
Sbjct: 152001891 gttcgagggtcatgacaccacagccagtggcat 152001923
Score = 117 bits (59), Expect = 1e-23
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtg-cgaagtggacacgttcat 975
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 152043673 atggagaaggggaacagcttgtcggacaccgacct-ccgtgccgaagtggacacgttcat 152043615
Query: 976 gttcgaggntcatgnacacacagccagtggcat 1008
|||||||| ||||| |||||||||||||||
Sbjct: 152043614 gttcgagggtcatgacaccacagccagtggcat 152043582
Score = 117 bits (59), Expect = 1e-23
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtg-cgaagtggacacgttcat 975
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 152107701 atggagaaggggaacagcttgtcggacaccgacct-ccgtgccgaagtggacacgttcat 152107759
Query: 976 gttcgaggntcatgnacacacagccagtggcat 1008
|||||||| ||||| |||||||||||||||
Sbjct: 152107760 gttcgagggtcatgacaccacagccagtggcat 152107792
Score = 117 bits (59), Expect = 1e-23
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtg-cgaagtggacacgttcat 975
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 152108878 atggagaaggggaacagcttgtcggacaccgacct-ccgtgccgaagtggacacgttcat 152108936
Query: 976 gttcgaggntcatgnacacacagccagtggcat 1008
|||||||| ||||| |||||||||||||||
Sbjct: 152108937 gttcgagggtcatgacaccacagccagtggcat 152108969
Score = 117 bits (59), Expect = 1e-23
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtg-cgaagtggacacgttcat 975
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 152137456 atggagaaggggaacagcttgtcggacaccgacct-ccgtgccgaagtggacacgttcat 152137514
Query: 976 gttcgaggntcatgnacacacagccagtggcat 1008
|||||||| ||||| |||||||||||||||
Sbjct: 152137515 gttcgagggtcatgacaccacagccagtggcat 152137547
Score = 117 bits (59), Expect = 1e-23
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtg-cgaagtggacacgttcat 975
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 152165487 atggagaaggggaacagcttgtcggacaccgacct-ccgtgccgaagtggacacgttcat 152165429
Query: 976 gttcgaggntcatgnacacacagccagtggcat 1008
|||||||| ||||| |||||||||||||||
Sbjct: 152165428 gttcgagggtcatgacaccacagccagtggcat 152165396
Score = 117 bits (59), Expect = 1e-23
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtg-cgaagtggacacgttcat 975
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 152178300 atggagaaggggaacagcttgtcggacaccgacct-ccgtgccgaagtggacacgttcat 152178358
Query: 976 gttcgaggntcatgnacacacagccagtggcat 1008
|||||||| ||||| |||||||||||||||
Sbjct: 152178359 gttcgagggtcatgacaccacagccagtggcat 152178391
Score = 115 bits (58), Expect = 5e-23
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtgcgaagtggacacgttcatg 976
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 151938469 atggagaaggggaacagcttgtcggacaccgacctccatgccgaagtggacacgttcatg 151938410
Query: 977 ttcgaggntcatgnacacacagccagtggcat 1008
||||||| ||||| |||||||||||||||
Sbjct: 151938409 ttcgagggtcatgacaccacagccagtggcat 151938378
Score = 107 bits (54), Expect = 1e-20
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 808 agaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaacgt 867
||||| |||||||| |||| ||||||| || ||||| ||| | ||| | ||||||||| |
Sbjct: 119151678 agaccaagtgatccggctgaggaaggctcacctgcagaaggaaggagagatggagaactt 119151737
Query: 868 gaggaagaagaggcacttggatttcctgaacatcctcctccttgcc 913
|||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 119151738 gaggaagaagaggcacttggatttcctggacatcctcctctttgcc 119151783
Score = 97.6 bits (49), Expect = 1e-17
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 406 tggtttgctcctgttgaatgggcagacgtggttccagcgtcggcggatgctgaccccagc 465
|||||||| ||| || |||||||||| |||||||||| | || |||||||||||||||
Sbjct: 151940841 tggtttgcctctgctggatgggcagacatggttccagcaccagcagatgctgaccccagc 151940782
Query: 466 cttccactatgacatcctgaagccctacgtaggtctcatggccaagtctgtccaagtgat 525
||||||||| |||||||| || ||||| || |||| ||||||| |||||||| |||||
Sbjct: 151940781 cttccactaagacatcctaaaaccctatgtgtgtcttgtggccaactctgtccaggtgat 151940722
Query: 526 gctgg 530
|||||
Sbjct: 151940721 gctgg 151940717
Score = 95.6 bits (48), Expect = 4e-17
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 806 acagaccgagtgatccagctgcggaaggcgcagctgcaaaagcagggaaaaatggagaac 865
||||||||||||||||||||| ||||| | || || || ||| ||||| | ||||| ||
Sbjct: 152200880 acagaccgagtgatccagctgaggaagactcaccttcagaaggagggagagatggaaaat 152200939
Query: 866 gtgaggaagaagaggcacttggatttcctgaacatcctcctccttgcc 913
|||| ||||||||||||||||||||||||| |||| |||||| |||||
Sbjct: 152200940 gtgaagaagaagaggcacttggatttcctggacattctcctctttgcc 152200987
Score = 91.7 bits (46), Expect = 7e-16
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 353 tcagaccccaagacttctgttgtctacagattgctgatcccctggattgg 402
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 151998910 tcagaccccaagaattctgttgtctacagattgctgatcccctggattgg 151998959
Score = 91.7 bits (46), Expect = 7e-16
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 353 tcagaccccaagacttctgttgtctacagattgctgatcccctggattgg 402
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 152046588 tcagaccccaagaattctgttgtctacagattgctgatcccctggattgg 152046539
Score = 91.7 bits (46), Expect = 7e-16
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 353 tcagaccccaagacttctgttgtctacagattgctgatcccctggattgg 402
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 152104791 tcagaccccaagaattctgttgtctacagattgctgatcccctggattgg 152104840
Score = 91.7 bits (46), Expect = 7e-16
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 353 tcagaccccaagacttctgttgtctacagattgctgatcccctggattgg 402
|||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 152134534 tcagaccccaagacttctgttgtctacagactgctgatcccctggattgg 152134583
Score = 77.8 bits (39), Expect = 1e-11
Identities = 95/111 (85%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 659 tcccactcctacatccaggccatttgggatctcaaaaatctc-ttttctacccgtacgaa 717
|||||||||||| |||||||| ||||||| |||| ||||||| |||||| || | ||
Sbjct: 151939255 tcccactcctacctccaggccgtttgggacctcagaaatctcattttctcccactg-gag 151939197
Query: 718 gagtgcctttctccagaatgacatcatctacaggctgagccctgaaagcca 768
||||||||| ||||| |||||| |||||||||||||||| |||||| ||||
Sbjct: 151939196 gagtgccttcctccacaatgacgtcatctacaggctgagtcctgaaggcca 151939146
Score = 71.9 bits (36), Expect = 6e-10
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 315 tctatgaccctgactacatgaaggtggtcctggcgagatc 354
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 119148301 tctatgaccctgactacatgaaggtggtcctggggagatc 119148340
Score = 67.9 bits (34), Expect = 1e-08
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 353 tcagaccccaagacttctgttgtctacagattgctgatcccctggattgg 402
||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 152198136 tcagagcccaaggctcctgttctctacagattgctgatcccctggattgg 152198185
Score = 65.9 bits (33), Expect = 4e-08
Identities = 56/61 (91%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtg-cgaagtggacacgttcat 975
|||||||| |||||||||||||| ||||||||| | ||||| ||||||||||||||||||
Sbjct: 152201074 atggagaatgggaacagcttgtctgacaccgacgt-ccgtgccgaagtggacacgttcat 152201132
Query: 976 g 976
|
Sbjct: 152201133 g 152201133
Score = 61.9 bits (31), Expect = 6e-07
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 917 atggagaaggggaacagcttgtcggacaccgacctcccgtgc-gaagtggacacgttcat 975
|||||||| |||| ||||||||| ||||||||||| |||||| ||||| |||||||||||
Sbjct: 119151876 atggagaatgggagcagcttgtctgacaccgacct-ccgtgctgaagtagacacgttcat 119151934
Query: 976 gtt 978
|||
Sbjct: 119151935 gtt 119151937
>gb|GL892328.1| Sus scrofa unplaced genomic scaffold chrU_scaffold1203
Length = 25253
Score = 85.7 bits (43), Expect = 4e-14
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 50 gccctggccagtgtctctgggctcctgcaggtggcctccctgctcgggctgctgctactt 109
||||||| ||||||| ||||||||||||| |||||||| ||| || |||||||||| |||
Sbjct: 18763 gccctgggcagtgtccctgggctcctgcatgtggcctcactgttcaggctgctgctgctt 18822
Query: 110 ctcctcaaggc 120
|||||||||||
Sbjct: 18823 ctcctcaaggc 18833
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,283,752
Number of extensions: 231
Number of successful extensions: 231
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 63
Length of query: 1008
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 987
Effective length of database: 2,808,413,156
Effective search space: 2771903784972
Effective search space used: 2771903784972
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)