Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008044
(2404 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001014964.1| serine/threonine-protein kinase A-Raf [Bos t... 1136 0.0
Alignment gi|NP_001095975.1| RAF proto-oncogene serine/threonine-protein ... 701 0.0
Alignment gi|XP_002687048.1| PREDICTED: v-raf murine sarcoma viral oncoge... 671 0.0
Alignment gi|XP_869161.2| PREDICTED: v-raf murine sarcoma viral oncogene ... 671 0.0
Alignment gi|XP_002697169.1| PREDICTED: RAF proto-oncogene serine/threoni... 230 5e-60
Alignment gi|NP_001193791.1| kinase suppressor of Ras 2 [Bos taurus]. 179 1e-44
Alignment gi|XP_002695708.1| PREDICTED: kinase suppressor of ras-like [Bo... 175 2e-43
Alignment gi|XP_001788801.1| PREDICTED: kinase suppressor of ras-like [Bo... 175 2e-43
Alignment gi|NP_001192220.1| mitogen-activated protein kinase kinase kina... 147 4e-35
Alignment gi|XP_001790682.1| PREDICTED: mitogen-activated protein kinase ... 147 4e-35
>ref|NP_001014964.1| serine/threonine-protein kinase A-Raf [Bos taurus].
Length = 606
Score = 1136 bits (2938), Expect = 0.0
Identities = 559/597 (93%), Positives = 562/597 (94%)
Frame = +3
Query: 105 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 284
MEPPRGPPANGAEPSR+VGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV
Sbjct: 1 MEPPRGPPANGAEPSRSVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 60
Query: 285 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 464
VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF
Sbjct: 61 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 120
Query: 465 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 644
HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSG SRQHE PSNRPLNEPL
Sbjct: 121 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGSSRQHEVPSNRPLNEPL 180
Query: 645 TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN 824
TPQ PSSCTQHRDPEHF FPA AN PLQRIRSTSTPNVHMVSTTAPMDSGL+QLT Q+FN
Sbjct: 181 TPQSPSSCTQHRDPEHFSFPAQANTPLQRIRSTSTPNVHMVSTTAPMDSGLIQLTGQNFN 240
Query: 825 TDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSG 1004
TD HSKSPSEQRERKSLADDKKKVKNLGYRDSG
Sbjct: 241 TDAAGNRGGGDGAPRGSPSPASVSSGRKSPHSKSPSEQRERKSLADDKKKVKNLGYRDSG 300
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK
Sbjct: 301 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 360
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL
Sbjct: 361 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 420
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM
Sbjct: 421 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 480
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK
Sbjct: 481 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 540
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 1895
AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC
Sbjct: 541 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 597
>ref|NP_001095975.1| RAF proto-oncogene serine/threonine-protein kinase [Bos taurus].
Length = 668
Score = 701 bits (1809), Expect = 0.0
Identities = 363/610 (59%), Positives = 437/610 (71%), Gaps = 25/610 (4%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+PS+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLS-GGSRQHETPSNRPLNEPLTPQGPSSC 668
YKFH+HCS+KVPT+CVD S R+ + GG + + R + E ++ P S
Sbjct: 170 YKFHEHCSTKVPTMCVDWSNIRQLLLFPNSTVGDGGVPALPSLTMRRMRESVSRIPPGSQ 229
Query: 669 TQHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDXX 836
++ P F F P+ + QR RSTSTPNVHMVS T P+DS +++ S N
Sbjct: 230 HRYSTPHAFTFSASSPSSEGSLSQRQRSTSTPNVHMVSATLPVDSRMIE--NNSLNASPR 287
Query: 837 XXXXXXXXXXXXXXXXXXXXXXXXXXHS-------------KSPSE-QRERK--SLADDK 968
S K+P+ QRER S +K
Sbjct: 288 AWSRRFCVRGRDAIRSHSESGSPSALSSSPNNLSPTGWSQPKTPAPAQRERAPGSSTQEK 347
Query: 969 KKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQA 1148
K++ G RDS YYWE+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ
Sbjct: 348 NKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF 407
Query: 1149 QAFKNEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLID 1328
QAF+NE+ VLRKTRHVNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID
Sbjct: 408 QAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID 467
Query: 1329 VARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSG 1508
+ARQTAQGMDYLHAKNIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+G
Sbjct: 468 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG 527
Query: 1509 SVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLS 1688
S+LWMA EVIRMQD NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY S
Sbjct: 528 SILWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS 587
Query: 1689 PDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR 1868
PDLSK+ NCPKAM+RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR
Sbjct: 588 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHR 647
Query: 1869 -TQADELPAC 1895
+++ AC
Sbjct: 648 AAHTEDINAC 657
>ref|XP_002687048.1| PREDICTED: v-raf murine sarcoma viral oncogene homolog B1 [Bos
taurus].
Length = 765
Score = 671 bits (1730), Expect = 0.0
Identities = 354/610 (58%), Positives = 429/610 (70%), Gaps = 21/610 (3%)
Frame = +3
Query: 129 ANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGR 308
+N P + + V+V+LPNKQRTVV R G++V DSL KAL +RGL +CC VYR+ G
Sbjct: 146 SNPKSPQKPI--VRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQDGE 203
Query: 309 KTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTC 488
K WDT I+ L GEEL VEVLE+VPLT HNFVRKTFF+LAFCDFC K LF GFRCQTC
Sbjct: 204 KKPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTC 263
Query: 489 GYKFHQHCSSKVPTVCVDMSTNRRQF------YHSVQDLSGGSRQHETP-SNRPLNEPLT 647
GYKFHQ CS++VP +CV+ F +H + + P + P P
Sbjct: 264 GYKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPIPQEEASLAETTLPCGSSPSAPPSD 323
Query: 648 PQGPSSCTQHRDPEHFPFPAP--------ANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQ 803
GP T + P P P N QR RS+S PNVH ++T P++ +
Sbjct: 324 SIGPPILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVH-INTIEPVNIDDL- 381
Query: 804 LTAQSFNTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLA--DDKKKV 977
+ Q F +D KSP QRERKS + +D+ ++
Sbjct: 382 IRDQGFRSDGGSTTGLSATPPASLPGSLSNVKAL----QKSPGPQRERKSSSSSEDRNRM 437
Query: 978 KNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAF 1157
K LG RDS WE+P ++ + +RIG+GSFGTV++G+WHGDVAVK+L V PT +Q QAF
Sbjct: 438 KTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAF 497
Query: 1158 KNEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVAR 1337
KNE+ VLRKTRHVNILLFMG+ T+P AI+TQWCEGSSLYHHLH+ +T+F+M++LID+AR
Sbjct: 498 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 557
Query: 1338 QTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVL 1517
QTAQGMDYLHAK+IIHRDLKSNNIFLHE LTVKIGDFGLATVK+RWSG+ EQ SGS+L
Sbjct: 558 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 617
Query: 1518 WMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDL 1697
WMA EVIRMQD NPYSFQSDVYA+G+VLYELMTG LPYS+I +RDQIIFMVGRGYLSPDL
Sbjct: 618 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 677
Query: 1698 SKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR--- 1868
SK+ SNCPKAM+RL+++CLK +R+ERPLFPQILA+IELL RSLPKI RSASEPSL+R
Sbjct: 678 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGF 737
Query: 1869 -TQADELPAC 1895
T+ L AC
Sbjct: 738 QTEDFSLYAC 747
>ref|XP_869161.2| PREDICTED: v-raf murine sarcoma viral oncogene homolog B1 isoform 2,
partial [Bos taurus].
Length = 686
Score = 671 bits (1730), Expect = 0.0
Identities = 354/610 (58%), Positives = 429/610 (70%), Gaps = 21/610 (3%)
Frame = +3
Query: 129 ANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGR 308
+N P + + V+V+LPNKQRTVV R G++V DSL KAL +RGL +CC VYR+ G
Sbjct: 67 SNPKSPQKPI--VRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQDGE 124
Query: 309 KTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTC 488
K WDT I+ L GEEL VEVLE+VPLT HNFVRKTFF+LAFCDFC K LF GFRCQTC
Sbjct: 125 KKPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTC 184
Query: 489 GYKFHQHCSSKVPTVCVDMSTNRRQF------YHSVQDLSGGSRQHETP-SNRPLNEPLT 647
GYKFHQ CS++VP +CV+ F +H + + P + P P
Sbjct: 185 GYKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPIPQEEASLAETTLPCGSSPSAPPSD 244
Query: 648 PQGPSSCTQHRDPEHFPFPAP--------ANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQ 803
GP T + P P P N QR RS+S PNVH ++T P++ +
Sbjct: 245 SIGPPILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVH-INTIEPVNIDDL- 302
Query: 804 LTAQSFNTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLA--DDKKKV 977
+ Q F +D KSP QRERKS + +D+ ++
Sbjct: 303 IRDQGFRSDGGSTTGLSATPPASLPGSLSNVKAL----QKSPGPQRERKSSSSSEDRNRM 358
Query: 978 KNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAF 1157
K LG RDS WE+P ++ + +RIG+GSFGTV++G+WHGDVAVK+L V PT +Q QAF
Sbjct: 359 KTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAF 418
Query: 1158 KNEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVAR 1337
KNE+ VLRKTRHVNILLFMG+ T+P AI+TQWCEGSSLYHHLH+ +T+F+M++LID+AR
Sbjct: 419 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 478
Query: 1338 QTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVL 1517
QTAQGMDYLHAK+IIHRDLKSNNIFLHE LTVKIGDFGLATVK+RWSG+ EQ SGS+L
Sbjct: 479 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 538
Query: 1518 WMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDL 1697
WMA EVIRMQD NPYSFQSDVYA+G+VLYELMTG LPYS+I +RDQIIFMVGRGYLSPDL
Sbjct: 539 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 598
Query: 1698 SKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR--- 1868
SK+ SNCPKAM+RL+++CLK +R+ERPLFPQILA+IELL RSLPKI RSASEPSL+R
Sbjct: 599 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGF 658
Query: 1869 -TQADELPAC 1895
T+ L AC
Sbjct: 659 QTEDFSLYAC 668
>ref|XP_002697169.1| PREDICTED: RAF proto-oncogene serine/threonine-protein kinase-like
[Bos taurus].
Length = 291
Score = 230 bits (586), Expect = 5e-60
Identities = 120/233 (51%), Positives = 156/233 (66%), Gaps = 8/233 (3%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+PS+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDL-SGGSRQHETPSNRPLNEPLTPQGPSSC 668
YKFH+HCS+KVPT+CVD S R+ + GG + + R + E ++ P S
Sbjct: 170 YKFHEHCSTKVPTMCVDWSNIRQLLLFPNSTVGDGGVPALPSLTMRRMRESVSRIPPGSQ 229
Query: 669 TQHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQ 815
++ P F F P+ + QR RSTSTPNVHMVS T P+DS ++++TA+
Sbjct: 230 HRYSTPHAFTFSASSPSSEGSLSQRQRSTSTPNVHMVSATLPVDSRMIEVTAR 282
>ref|NP_001193791.1| kinase suppressor of Ras 2 [Bos taurus].
Length = 949
Score = 179 bits (453), Expect = 1e-44
Identities = 106/292 (36%), Positives = 166/292 (56%), Gaps = 10/292 (3%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
W++P ++++ + IG G FG V+ GRWHG+VA++++ + + +Q +AFK E+ R+TR
Sbjct: 659 WDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTR 718
Query: 1191 HVNILLFMG-FMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLH 1367
H N++LFMG M+ P AIIT C+G +LY + A D+ + +A++ +GM YLH
Sbjct: 719 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 778
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQ---PLEQPSGSVLWMAAEVI 1538
AK I+H+DLKS N+F G V I DFGL ++ + L +G + +A E+I
Sbjct: 779 AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRRDDKLRIQNGWLCHLAPEII 837
Query: 1539 RMQDPN------PYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLS 1700
R P+ P+S SDV+A G + YEL P+ + II+ +G G + P+LS
Sbjct: 838 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEAIIWQMGTG-MKPNLS 895
Query: 1701 KISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEP 1856
+I K + +L C F++EERP F +++ +E LPK R S P
Sbjct: 896 QIGMG--KEISDILLFCWAFEQEERPTFTKLMDMLE----KLPKRNRRLSHP 941
>ref|XP_002695708.1| PREDICTED: kinase suppressor of ras-like [Bos taurus].
Length = 999
Score = 175 bits (443), Expect = 2e-43
Identities = 105/300 (35%), Positives = 164/300 (54%), Gaps = 10/300 (3%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
W++P +V+L + IG G +G V RGRWHG+VA+++L++ + + FK E+ R+TR
Sbjct: 682 WDIPFEQVELGEPIGQGRWGRVHRGRWHGEVAIRLLEMDGHNQDHLKLFKKEVMNYRQTR 741
Query: 1191 HVNILLFMG-FMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLH 1367
H N++LFMG M P AIIT +C+G +L+ + T D+ + +A++ +GM YLH
Sbjct: 742 HENVVLFMGACMNPPHLAIITSFCKGRTLHSFVRDPKTSLDINKTRQIAQEIIKGMGYLH 801
Query: 1368 AKNIIHRDLKSNNIFLHEGLTV--KIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIR 1541
AK I+H+DLKS N+F G V G FG++ V L+ + ++A E++R
Sbjct: 802 AKGIVHKDLKSKNVFYDNGKVVITDFGLFGISGVVREGRRENQLKLSHDWLCYLAPEIVR 861
Query: 1542 MQDPN------PYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGY-LSPDLS 1700
P P+S +DVYA+G V YEL P+ + + + +I+ +G G + L+
Sbjct: 862 EMTPGKDEDQLPFSKAADVYAFGTVWYELQARDWPFKN-QAAEALIWQIGSGEGMKRVLA 920
Query: 1701 KISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQAD 1880
IS K + +LS C F +ERP FP ++ +E LPK+ R S P AD
Sbjct: 921 SISLG--KEVTEILSACWAFDLQERPSFPLLMDMLE----KLPKLNRRLSHPGHFWKSAD 974
>ref|XP_001788801.1| PREDICTED: kinase suppressor of ras-like [Bos taurus].
Length = 999
Score = 175 bits (443), Expect = 2e-43
Identities = 105/300 (35%), Positives = 164/300 (54%), Gaps = 10/300 (3%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
W++P +V+L + IG G +G V RGRWHG+VA+++L++ + + FK E+ R+TR
Sbjct: 682 WDIPFEQVELGEPIGQGRWGRVHRGRWHGEVAIRLLEMDGHNQDHLKLFKKEVMNYRQTR 741
Query: 1191 HVNILLFMG-FMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLH 1367
H N++LFMG M P AIIT +C+G +L+ + T D+ + +A++ +GM YLH
Sbjct: 742 HENVVLFMGACMNPPHLAIITSFCKGRTLHSFVRDPKTSLDINKTRQIAQEIIKGMGYLH 801
Query: 1368 AKNIIHRDLKSNNIFLHEGLTV--KIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIR 1541
AK I+H+DLKS N+F G V G FG++ V L+ + ++A E++R
Sbjct: 802 AKGIVHKDLKSKNVFYDNGKVVITDFGLFGISGVVREGRRENQLKLSHDWLCYLAPEIVR 861
Query: 1542 MQDPN------PYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGY-LSPDLS 1700
P P+S +DVYA+G V YEL P+ + + + +I+ +G G + L+
Sbjct: 862 EMTPGKDEDQLPFSKAADVYAFGTVWYELQARDWPFKN-QAAEALIWQIGSGEGMKRVLA 920
Query: 1701 KISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQAD 1880
IS K + +LS C F +ERP FP ++ +E LPK+ R S P AD
Sbjct: 921 SISLG--KEVTEILSACWAFDLQERPSFPLLMDMLE----KLPKLNRRLSHPGHFWKSAD 974
>ref|NP_001192220.1| mitogen-activated protein kinase kinase kinase 12 [Bos taurus].
Length = 860
Score = 147 bits (371), Expect = 4e-35
Identities = 103/273 (37%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVAQPTAEQAQAFKNEMQVLRKT 1187
WEVP E+ L+ +G+G+ G VF GR+HG+ VAVK ++ + T +++ LRK
Sbjct: 118 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKL 168
Query: 1188 RHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
+H NI+ F G T+ P + I+ ++C LY L A L+D + A GM+YL
Sbjct: 169 KHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSMGIAGGMNYL 227
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFG----LATVKTRWSGAQPLEQPSGSVLWMAAE 1532
H IIHRDLKS N+ + VKI DFG L+ T+ S A G+V WMA E
Sbjct: 228 HLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFA-------GTVAWMAPE 280
Query: 1533 VIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISS 1712
VIR + P S + D++++GVVL+EL+TG +PY + S II+ VG L + S
Sbjct: 281 VIRNE---PVSEKVDIWSFGVVLWELLTGEIPYKDVDS-SAIIWGVGSNSLH---LPVPS 333
Query: 1713 NCPKAMRRLLSDCLKFQREERPLFPQILATIEL 1811
+CP + LL C + RP F QIL +++
Sbjct: 334 SCPDGFKILLRQCWNSKPRNRPSFRQILLHLDI 366
>ref|XP_001790682.1| PREDICTED: mitogen-activated protein kinase kinase kinase 12 [Bos
taurus].
Length = 860
Score = 147 bits (371), Expect = 4e-35
Identities = 103/273 (37%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVAQPTAEQAQAFKNEMQVLRKT 1187
WEVP E+ L+ +G+G+ G VF GR+HG+ VAVK ++ + T +++ LRK
Sbjct: 118 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKL 168
Query: 1188 RHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
+H NI+ F G T+ P + I+ ++C LY L A L+D + A GM+YL
Sbjct: 169 KHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSMGIAGGMNYL 227
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFG----LATVKTRWSGAQPLEQPSGSVLWMAAE 1532
H IIHRDLKS N+ + VKI DFG L+ T+ S A G+V WMA E
Sbjct: 228 HLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFA-------GTVAWMAPE 280
Query: 1533 VIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISS 1712
VIR + P S + D++++GVVL+EL+TG +PY + S II+ VG L + S
Sbjct: 281 VIRNE---PVSEKVDIWSFGVVLWELLTGEIPYKDVDS-SAIIWGVGSNSLH---LPVPS 333
Query: 1713 NCPKAMRRLLSDCLKFQREERPLFPQILATIEL 1811
+CP + LL C + RP F QIL +++
Sbjct: 334 SCPDGFKILLRQCWNSKPRNRPSFRQILLHLDI 366
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 103,442,966
Number of extensions: 3422553
Number of successful extensions: 19796
Number of sequences better than 1.0e-05: 596
Number of HSP's gapped: 18826
Number of HSP's successfully gapped: 623
Length of query: 801
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 691
Effective length of database: 14,041,694
Effective search space: 9702810554
Effective search space used: 9702810554
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008044
(2404 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_548976.2| PREDICTED: similar to A-Raf proto-oncogene seri... 1101 0.0
Alignment gi|XP_859421.1| PREDICTED: similar to RAF proto-oncogene serine... 719 0.0
Alignment gi|XP_859382.1| PREDICTED: similar to RAF proto-oncogene serine... 714 0.0
Alignment gi|XP_859313.1| PREDICTED: similar to RAF proto-oncogene serine... 713 0.0
Alignment gi|XP_849708.1| PREDICTED: similar to RAF proto-oncogene serine... 704 0.0
Alignment gi|XP_541762.2| PREDICTED: similar to RAF proto-oncogene serine... 704 0.0
Alignment gi|XP_859234.1| PREDICTED: similar to RAF proto-oncogene serine... 704 0.0
Alignment gi|XP_859493.1| PREDICTED: similar to RAF proto-oncogene serine... 699 0.0
Alignment gi|XP_859456.1| PREDICTED: similar to RAF proto-oncogene serine... 697 0.0
Alignment gi|XP_859528.1| PREDICTED: similar to RAF proto-oncogene serine... 693 0.0
>ref|XP_548976.2| PREDICTED: similar to A-Raf proto-oncogene serine/threonine-protein
kinase (A-raf-1) (Proto-oncogene Pks) isoform 1 [Canis
familiaris].
Length = 597
Score = 1101 bits (2847), Expect = 0.0
Identities = 547/597 (91%), Positives = 553/597 (92%)
Frame = +3
Query: 105 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 284
MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV
Sbjct: 1 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 60
Query: 285 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 464
VYRLI+GRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF
Sbjct: 61 VYRLIEGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 120
Query: 465 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 644
HGFRCQTCGYKFHQHCSSKVPTVCVDMSTN R VQDLSGGSRQHE PSNRPLNEPL
Sbjct: 121 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNCRH----VQDLSGGSRQHEAPSNRPLNEPL 176
Query: 645 TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN 824
TPQGPSSCTQHRDPEHFPFPAPAN PLQRIRSTSTPNVHMVSTTAPMDS L+Q+
Sbjct: 177 TPQGPSSCTQHRDPEHFPFPAPANTPLQRIRSTSTPNVHMVSTTAPMDSSLIQV-----G 231
Query: 825 TDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSG 1004
+ HSKSPSEQRERKS+ADDKKKVKNLGYRDSG
Sbjct: 232 VEGVVLAPMVSPPPSGEPQPGQRVSGRKSPHSKSPSEQRERKSVADDKKKVKNLGYRDSG 291
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK
Sbjct: 292 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 351
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL
Sbjct: 352 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 411
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRDLKSN+IFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM
Sbjct: 412 HAKNIIHRDLKSNSIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 471
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK
Sbjct: 472 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 531
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 1895
AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC
Sbjct: 532 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 588
>ref|XP_859421.1| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 8 [Canis
familiaris].
Length = 652
Score = 719 bits (1856), Expect = 0.0
Identities = 364/596 (61%), Positives = 437/596 (73%), Gaps = 11/596 (1%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPLTPQGPSSCT 671
YKFH+HCS+KVPT+CVD S R+ F H + + G RQ P P+ E + SS
Sbjct: 170 YKFHEHCSTKVPTMCVDWSNIRQLFRHEIAPWAKGRRQTAAPPRDPIREMFSFSSSSSQH 229
Query: 672 QHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDXXX 839
++ P F F P+ + QR RSTSTPNVHMVSTT P+DS ++++ +
Sbjct: 230 RYSTPHAFTFNSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEVMGPLAGGEEGG 289
Query: 840 XXXXXXXXXXXXXXXXXXXXXXXXXHSKSP-SEQRERK--SLADDKKKVKNLGYRDSGYY 1010
K+P QRER S +K K++ G RDS YY
Sbjct: 290 GDSSPSALSSSPNNLSPTGWS----QPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSSYY 345
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRKTR
Sbjct: 346 WEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR 405
Query: 1191 HVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHA 1370
HVNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYLHA
Sbjct: 406 HVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 465
Query: 1371 KNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQD 1550
KNIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LWMA EVIRMQD
Sbjct: 466 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQD 525
Query: 1551 PNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPKAM 1730
NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPKAM
Sbjct: 526 NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAM 585
Query: 1731 RRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
+RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 586 KRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 641
>ref|XP_859382.1| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 7 [Canis
familiaris].
Length = 653
Score = 714 bits (1842), Expect = 0.0
Identities = 366/598 (61%), Positives = 435/598 (72%), Gaps = 13/598 (2%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPLTPQGPSSCT 671
YKFH+HCS+KVPT+CVD S N RQ +G P +PL P P P +
Sbjct: 170 YKFHEHCSTKVPTMCVDWS-NIRQLLEKQAPCTGSPTWDSIPGAKPLRHPGIPCSPLLNS 228
Query: 672 QHR--DPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDX 833
QHR P F F P+ + QR RSTSTPNVHMVSTT P+DS ++++ +
Sbjct: 229 QHRYSTPHAFTFNSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEVMGPLAGGEE 288
Query: 834 XXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSP-SEQRERK--SLADDKKKVKNLGYRDSG 1004
K+P QRER S +K K++ G RDS
Sbjct: 289 GGGDSSPSALSSSPNNLSPTGWS----QPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSS 344
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWE+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRK
Sbjct: 345 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK 404
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYL
Sbjct: 405 TRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 464
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LWMA EVIRM
Sbjct: 465 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRM 524
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QD NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPK
Sbjct: 525 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 584
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
AM+RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 585 AMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 642
>ref|XP_859313.1| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 5 [Canis
familiaris].
Length = 654
Score = 713 bits (1840), Expect = 0.0
Identities = 366/598 (61%), Positives = 436/598 (72%), Gaps = 13/598 (2%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPLTPQGPSSCT 671
YKFH+HCS+KVPT+CVD S+ R+ S GSR +PL P P P +
Sbjct: 170 YKFHEHCSTKVPTMCVDWSSMHREPDVGFDPGSPGSRPGPKAGAKPLRHPGIPCSPLLNS 229
Query: 672 QHR--DPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDX 833
QHR P F F P+ + QR RSTSTPNVHMVSTT P+DS ++++ +
Sbjct: 230 QHRYSTPHAFTFNSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEVMGPLAGGEE 289
Query: 834 XXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSP-SEQRERK--SLADDKKKVKNLGYRDSG 1004
K+P QRER S +K K++ G RDS
Sbjct: 290 GGGDSSPSALSSSPNNLSPTGWS----QPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSS 345
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWE+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRK
Sbjct: 346 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK 405
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYL
Sbjct: 406 TRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 465
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LWMA EVIRM
Sbjct: 466 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRM 525
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QD NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPK
Sbjct: 526 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 585
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
AM+RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 586 AMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 643
>ref|XP_849708.1| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 3 [Canis
familiaris].
Length = 645
Score = 704 bits (1817), Expect = 0.0
Identities = 365/598 (61%), Positives = 436/598 (72%), Gaps = 13/598 (2%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPS--NRPLNEPLTPQGPSS 665
YKFH+HCS+KVPT+CVD S N RQ G S PS R + E ++ SS
Sbjct: 170 YKFHEHCSTKVPTMCVDWS-NIRQLLLFPNSTIGDSGVPALPSLTMRRMRESVSRMPVSS 228
Query: 666 CTQHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDX 833
++ P F F P+ + QR RSTSTPNVHMVSTT P+DS +++ +S +
Sbjct: 229 QHRYSTPHAFTFNSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEDAIRSHSESG 288
Query: 834 XXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSP-SEQRERK--SLADDKKKVKNLGYRDSG 1004
K+P QRER S +K K++ G RDS
Sbjct: 289 TCPNSPNNLSPTGWS------------QPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSS 336
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWE+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRK
Sbjct: 337 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK 396
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYL
Sbjct: 397 TRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 456
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LWMA EVIRM
Sbjct: 457 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRM 516
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QD NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPK
Sbjct: 517 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 576
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
AM+RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 577 AMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 634
>ref|XP_541762.2| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 2 [Canis
familiaris].
Length = 648
Score = 704 bits (1817), Expect = 0.0
Identities = 360/595 (60%), Positives = 432/595 (72%), Gaps = 10/595 (1%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPS--NRPLNEPLTPQGPSS 665
YKFH+HCS+KVPT+CVD S N RQ G S PS R + E ++ SS
Sbjct: 170 YKFHEHCSTKVPTMCVDWS-NIRQLLLFPNSTIGDSGVPALPSLTMRRMRESVSRMPVSS 228
Query: 666 CTQHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDX 833
++ P F F P+ + QR RSTSTPNVHMVSTT P+DS +++ +S +
Sbjct: 229 QHRYSTPHAFTFNSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEDAIRSHSESA 288
Query: 834 XXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSGYYW 1013
++P S +K K++ G RDS YYW
Sbjct: 289 SPSALSSSPNNLSPTGWSQPKTPVPAQRERAPG------SGTQEKNKIRPRGQRDSSYYW 342
Query: 1014 EVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRH 1193
E+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRKTRH
Sbjct: 343 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 402
Query: 1194 VNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAK 1373
VNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYLHAK
Sbjct: 403 VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK 462
Query: 1374 NIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDP 1553
NIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LWMA EVIRMQD
Sbjct: 463 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDN 522
Query: 1554 NPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPKAMR 1733
NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPKAM+
Sbjct: 523 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK 582
Query: 1734 RLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 583 RLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 637
>ref|XP_859234.1| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 4 [Canis
familiaris].
Length = 648
Score = 704 bits (1817), Expect = 0.0
Identities = 360/595 (60%), Positives = 432/595 (72%), Gaps = 10/595 (1%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPS--NRPLNEPLTPQGPSS 665
YKFH+HCS+KVPT+CVD S N RQ G S PS R + E ++ SS
Sbjct: 170 YKFHEHCSTKVPTMCVDWS-NIRQLLLFPNSTIGDSGVPALPSLTMRRMRESVSRMPVSS 228
Query: 666 CTQHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDX 833
++ P F F P+ + QR RSTSTPNVHMVSTT P+DS +++ +S +
Sbjct: 229 QHRYSTPHAFTFNSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEDAIRSHSESA 288
Query: 834 XXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSGYYW 1013
++P S +K K++ G RDS YYW
Sbjct: 289 SPSALSSSPNNLSPTGWSQPKTPVPAQRERAPG------SGTQEKNKIRPRGQRDSSYYW 342
Query: 1014 EVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRH 1193
E+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRKTRH
Sbjct: 343 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 402
Query: 1194 VNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAK 1373
VNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYLHAK
Sbjct: 403 VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK 462
Query: 1374 NIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDP 1553
NIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LWMA EVIRMQD
Sbjct: 463 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDN 522
Query: 1554 NPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPKAMR 1733
NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPKAM+
Sbjct: 523 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK 582
Query: 1734 RLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 583 RLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 637
>ref|XP_859493.1| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 10 [Canis
familiaris].
Length = 665
Score = 699 bits (1804), Expect = 0.0
Identities = 364/606 (60%), Positives = 437/606 (72%), Gaps = 21/606 (3%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPS--NRPLNEPLTPQGPSS 665
YKFH+HCS+KVPT+CVD S N RQ G S PS R + E ++ SS
Sbjct: 170 YKFHEHCSTKVPTMCVDWS-NIRQLLLFPNSTIGDSGVPALPSLTMRRMRESVSRMPVSS 228
Query: 666 CTQHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDX 833
++ P F F P+ + QR RSTSTPNVHMVSTT P+DS +++ + + +
Sbjct: 229 QHRYSTPHAFTFNSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIENNSLNASPRA 288
Query: 834 XXXXXXXXXXXXXXXXXXXXXXXXXXXH--------SKSP-SEQRERK--SLADDKKKVK 980
+ K+P QRER S +K K++
Sbjct: 289 WSRRFCLRGRDAIRSHSESGTCPNSPNNLSPTGWSQPKTPVPAQRERAPGSGTQEKNKIR 348
Query: 981 NLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFK 1160
G RDS YYWE+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+
Sbjct: 349 PRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFR 408
Query: 1161 NEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQ 1340
NE+ VLRKTRHVNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQ
Sbjct: 409 NEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ 468
Query: 1341 TAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLW 1520
TAQGMDYLHAKNIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LW
Sbjct: 469 TAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILW 528
Query: 1521 MAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLS 1700
MA EVIRMQD NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLS
Sbjct: 529 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 588
Query: 1701 KISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQA 1877
K+ NCPKAM+RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR
Sbjct: 589 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHT 648
Query: 1878 DELPAC 1895
+++ AC
Sbjct: 649 EDINAC 654
>ref|XP_859456.1| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 9 [Canis
familiaris].
Length = 630
Score = 697 bits (1799), Expect = 0.0
Identities = 362/594 (60%), Positives = 431/594 (72%), Gaps = 9/594 (1%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPS--NRPLNEPLTPQGPSS 665
YKFH+HCS+KVPT+CVD S N RQ G S PS R + E ++ S
Sbjct: 170 YKFHEHCSTKVPTMCVDWS-NIRQLLLFPNSTIGDSGVPALPSLTMRRMRESVSRMPVS- 227
Query: 666 CTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDXXXXX 845
P P+ + QR RSTSTPNVHMVSTT P+DS +++ +S +
Sbjct: 228 ----------PTPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEDAIRSHSESGTCPN 277
Query: 846 XXXXXXXXXXXXXXXXXXXXXXXHSKSP-SEQRERK--SLADDKKKVKNLGYRDSGYYWE 1016
K+P QRER S +K K++ G RDS YYWE
Sbjct: 278 SPNNLSPTGWS------------QPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSSYYWE 325
Query: 1017 VPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHV 1196
+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRKTRHV
Sbjct: 326 IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHV 385
Query: 1197 NILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAKN 1376
NILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYLHAKN
Sbjct: 386 NILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 445
Query: 1377 IIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPN 1556
IIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LWMA EVIRMQD N
Sbjct: 446 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDNN 505
Query: 1557 PYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPKAMRR 1736
P+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPKAM+R
Sbjct: 506 PFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKR 565
Query: 1737 LLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
L++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 566 LVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 619
>ref|XP_859528.1| PREDICTED: similar to RAF proto-oncogene serine/threonine-protein
kinase (Raf-1) (C-RAF) (cRaf) isoform 11 [Canis
familiaris].
Length = 615
Score = 693 bits (1788), Expect = 0.0
Identities = 351/589 (59%), Positives = 422/589 (71%), Gaps = 4/589 (0%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPLTPQGPSSCT 671
YKFH+HCS+KVPT+CVD S R+ F ++ TP
Sbjct: 170 YKFHEHCSTKVPTMCVDWSNIRQLF---------SQHRYSTP------------------ 202
Query: 672 QHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDXXXXXXX 851
H + P+ + QR RSTSTPNVHMVSTT P+DS +++ +S +
Sbjct: 203 -HAFTFNSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEDAIRSHSESASPSALS 261
Query: 852 XXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSGYYWEVPPSE 1031
++P S +K K++ G RDS YYWE+ SE
Sbjct: 262 SSPNNLSPTGWSQPKTPVPAQRERAPG------SGTQEKNKIRPRGQRDSSYYWEIEASE 315
Query: 1032 VQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLF 1211
V L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRKTRHVNILLF
Sbjct: 316 VMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLF 375
Query: 1212 MGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAKNIIHRD 1391
MG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYLHAKNIIHRD
Sbjct: 376 MGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRD 435
Query: 1392 LKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQ 1571
+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GS+LWMA EVIRMQD NP+SFQ
Sbjct: 436 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDNNPFSFQ 495
Query: 1572 SDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDC 1751
SDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPKAM+RL++DC
Sbjct: 496 SDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADC 555
Query: 1752 LKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 556 VKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 604
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 107,984,595
Number of extensions: 3526685
Number of successful extensions: 21029
Number of sequences better than 1.0e-05: 870
Number of HSP's gapped: 19655
Number of HSP's successfully gapped: 899
Length of query: 801
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 690
Effective length of database: 15,174,208
Effective search space: 10470203520
Effective search space used: 10470203520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008044
(2404 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999494.1| serine/threonine-protein kinase A-Raf [Sus scro... 1154 0.0
Alignment gi|XP_003360338.1| PREDICTED: serine/threonine-protein kinase A... 1108 0.0
Alignment gi|XP_003134658.1| PREDICTED: serine/threonine-protein kinase B... 672 0.0
Alignment gi|XP_003132939.2| PREDICTED: kinase suppressor of Ras 2 [Sus s... 177 2e-44
Alignment gi|XP_003126240.1| PREDICTED: mitogen-activated protein kinase ... 147 3e-35
Alignment gi|NP_001073675.2| tyrosine-protein kinase Fyn [Sus scrofa]. 146 6e-35
Alignment gi|XP_001925827.2| PREDICTED: tyrosine-protein kinase FRK [Sus ... 145 1e-34
Alignment gi|XP_003132618.2| PREDICTED: mitogen-activated protein kinase ... 139 7e-33
Alignment gi|XP_001928649.1| PREDICTED: proto-oncogene tyrosine-protein k... 137 3e-32
Alignment gi|NP_001128439.1| ephrin type-A receptor 4 [Sus scrofa]. 133 4e-31
>ref|NP_999494.1| serine/threonine-protein kinase A-Raf [Sus scrofa].
Length = 606
Score = 1154 bits (2986), Expect = 0.0
Identities = 569/597 (95%), Positives = 569/597 (95%)
Frame = +3
Query: 105 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 284
MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV
Sbjct: 1 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 60
Query: 285 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 464
VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF
Sbjct: 61 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 120
Query: 465 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 644
HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL
Sbjct: 121 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 180
Query: 645 TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN 824
TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN
Sbjct: 181 TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN 240
Query: 825 TDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSG 1004
TD HSKSPSEQRERKSLADDKKKVKNLGYRDSG
Sbjct: 241 TDAAGNRGGGDGAPRGSPSPASVSSGRKSPHSKSPSEQRERKSLADDKKKVKNLGYRDSG 300
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK
Sbjct: 301 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 360
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL
Sbjct: 361 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 420
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM
Sbjct: 421 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 480
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK
Sbjct: 481 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 540
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 1895
AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC
Sbjct: 541 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 597
>ref|XP_003360338.1| PREDICTED: serine/threonine-protein kinase A-Raf-like [Sus scrofa].
Length = 606
Score = 1108 bits (2867), Expect = 0.0
Identities = 550/599 (91%), Positives = 555/599 (92%), Gaps = 2/599 (0%)
Frame = +3
Query: 105 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 284
MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV
Sbjct: 1 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 60
Query: 285 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 464
VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF
Sbjct: 61 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 120
Query: 465 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 644
HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL
Sbjct: 121 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 180
Query: 645 TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN 824
TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN
Sbjct: 181 TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN 240
Query: 825 TDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSG 1004
TD HSKSPSEQRERKSLADDKKKVKNLGYRDSG
Sbjct: 241 TDAAGNRGGGDGAPRGSPSPASVSSGRKSPHSKSPSEQRERKSLADDKKKVKNLGYRDSG 300
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK
Sbjct: 301 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 360
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL
Sbjct: 361 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 420
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRDLKSN+IFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM
Sbjct: 421 HAKNIIHRDLKSNSIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 480
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK
Sbjct: 481 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 540
Query: 1725 AMRRLLSDCLKFQREERPLFPQI--LATIELLQRSLPKIERSASEPSLHRTQADELPAC 1895
AMRRLLSDCLKFQREERPLFPQ+ ++ L R L + R A E HRTQADELPAC
Sbjct: 541 AMRRLLSDCLKFQREERPLFPQVGQGGGLDYLGRKL--LRRKALEXXXHRTQADELPAC 597
>ref|XP_003134658.1| PREDICTED: serine/threonine-protein kinase B-raf, partial [Sus
scrofa].
Length = 720
Score = 672 bits (1735), Expect = 0.0
Identities = 356/616 (57%), Positives = 433/616 (70%), Gaps = 21/616 (3%)
Frame = +3
Query: 111 PPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVY 290
P +N P + + V+V+LPNKQRTVV R G++V DSL KAL +RGL +CC VY
Sbjct: 95 PTDASRSNPKSPQKPI--VRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVY 152
Query: 291 RLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHG 470
R+ G K WDT I+ L GEEL VEVLE+VPLT HNFVRKTFF+LAFCDFC K LF G
Sbjct: 153 RIQDGEKKPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQG 212
Query: 471 FRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQF------YHSV-QDLSGGSRQHETPSNRP 629
FRCQTCGYKFHQ CS++VP +CV+ F +H + Q+ + + T + P
Sbjct: 213 FRCQTCGYKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPIPQEEASLAETALTSGSSP 272
Query: 630 LNEPLTPQGPSSCTQHRDPEHFPFPAP--------ANAPLQRIRSTSTPNVHMVSTTAPM 785
P GP T + P P P N QR RS+S PNVH ++T P+
Sbjct: 273 SAPPSDSLGPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVH-INTIEPV 331
Query: 786 DSGLVQLTAQSFNTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLA-- 959
+ + + Q F +D KSP QRERKS +
Sbjct: 332 NIDDL-IRDQGFRSDGGSTTGLSATPPASLPGSLTNVKAL----QKSPGPQRERKSSSSS 386
Query: 960 DDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTA 1139
+D+ ++K LG RDS WE+P ++ + +RIG+GSFGTV++G+WHGDVAVK+L V PT
Sbjct: 387 EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTP 446
Query: 1140 EQAQAFKNEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQ 1319
+Q QAFKNE+ VLRKTRHVNILLFMG+ T+P AI+TQWCEGSSLYHHLH+ +T+F+M++
Sbjct: 447 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 506
Query: 1320 LIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQ 1499
LID+ARQTAQGMDYLHAK+IIHRDLKSNNIFLHE LTVKIGDFGLATVK+RWSG+ EQ
Sbjct: 507 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 566
Query: 1500 PSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRG 1679
SGS+LWMA EVIRMQD NPYSFQSDVYA+G+VLYELMTG LPYS+I +RDQIIFMVGRG
Sbjct: 567 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 626
Query: 1680 YLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPS 1859
YLSPDLSK+ SNCPKAM+RL+++CLK +R+ERPLFPQILA+IELL RSLPKI RSASEPS
Sbjct: 627 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPS 686
Query: 1860 LHR----TQADELPAC 1895
L+R T+ L AC
Sbjct: 687 LNRAGFQTEDFSLYAC 702
>ref|XP_003132939.2| PREDICTED: kinase suppressor of Ras 2 [Sus scrofa].
Length = 651
Score = 177 bits (450), Expect = 2e-44
Identities = 106/292 (36%), Positives = 165/292 (56%), Gaps = 10/292 (3%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
W++P ++++ + IG G FG V+ GRWHG+VA++++ + + EQ +AFK E+ R+TR
Sbjct: 361 WDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEEQLKAFKREVMAYRQTR 420
Query: 1191 HVNILLFMG-FMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLH 1367
H N++LFMG M+ P AIIT C+G +LY + A D+ + +A++ + M YLH
Sbjct: 421 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKAMGYLH 480
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQ---PLEQPSGSVLWMAAEVI 1538
AK I+H+DLKS N+F G V I DFGL ++ + L +G + +A E+I
Sbjct: 481 AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRRDDKLRIQNGWLCHLAPEII 539
Query: 1539 RMQDPN------PYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLS 1700
R P+ P+S SDV+A G + YEL P+ + II+ +G G + P+LS
Sbjct: 540 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEAIIWQMGTG-MKPNLS 597
Query: 1701 KISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEP 1856
+I K + +L C F++EERP F +++ +E LPK R S P
Sbjct: 598 QIGMG--KEISDILLFCWAFEQEERPTFTKLMDMLE----KLPKRNRRLSHP 643
>ref|XP_003126240.1| PREDICTED: mitogen-activated protein kinase kinase kinase 12 [Sus
scrofa].
Length = 892
Score = 147 bits (371), Expect = 3e-35
Identities = 103/273 (37%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVAQPTAEQAQAFKNEMQVLRKT 1187
WEVP E+ L+ +G+G+ G VF GR+HG+ VAVK ++ + T +++ LRK
Sbjct: 151 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKL 201
Query: 1188 RHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
+H NI+ F G T+ P + I+ ++C LY L A L+D + A GM+YL
Sbjct: 202 KHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSMGIAGGMNYL 260
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFG----LATVKTRWSGAQPLEQPSGSVLWMAAE 1532
H IIHRDLKS N+ + VKI DFG L+ T+ S A G+V WMA E
Sbjct: 261 HLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFA-------GTVAWMAPE 313
Query: 1533 VIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISS 1712
VIR + P S + D++++GVVL+EL+TG +PY + S II+ VG L + S
Sbjct: 314 VIRNE---PVSEKVDIWSFGVVLWELLTGEIPYKDVDS-SAIIWGVGSNSLH---LPVPS 366
Query: 1713 NCPKAMRRLLSDCLKFQREERPLFPQILATIEL 1811
+CP + LL C + RP F QIL +++
Sbjct: 367 SCPDGFKILLRQCWNSKPRNRPSFRQILLHLDI 399
>ref|NP_001073675.2| tyrosine-protein kinase Fyn [Sus scrofa].
Length = 537
Score = 146 bits (368), Expect = 6e-35
Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 4/270 (1%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+P +QL+KR+G G FG V+ G W+G+ V + K +P ++F E Q+++K +
Sbjct: 264 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAI-KTLKPGTMSPESFLEEAQIMKKLK 322
Query: 1191 HVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTR-FDMVQLIDVARQTAQGMDYLH 1367
H ++ ++ I+T++ SL L + R + L+D+A Q A GM Y+
Sbjct: 323 HDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 382
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATV--KTRWSGAQPLEQPSGSVLWMAAEVIR 1541
N IHRDL+S NI + GL KI DFGLA + ++ Q + P + W A E
Sbjct: 383 RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFP---IKWTAPEAAL 439
Query: 1542 MQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNC 1718
++ +SDV+++G++L EL+T G +PY + +R +++ V RGY P +C
Sbjct: 440 Y---GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLEQVERGYRMP----CPQDC 491
Query: 1719 PKAMRRLLSDCLKFQREERPLFPQILATIE 1808
P ++ L+ C K EERP F + +E
Sbjct: 492 PISLHELMIHCWKKDPEERPTFEYLQGFLE 521
>ref|XP_001925827.2| PREDICTED: tyrosine-protein kinase FRK [Sus scrofa].
Length = 511
Score = 145 bits (366), Expect = 1e-34
Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 8/269 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+ + +QLLKR+G+G FG V+ G W+ V V K +P + F E Q+++ R
Sbjct: 236 WEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAV-KTLKPGSMDPNDFLREAQIMKNLR 294
Query: 1191 HVNILLFMGFMT-RPGFAIITQWCEGSSLYHHL-HVADTRFDMVQLIDVARQTAQGMDYL 1364
H ++ T IIT+ SL +L + A ++ + Q +D+A Q A GM YL
Sbjct: 295 HPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDAGSKIHLTQQVDMAAQVASGMAYL 354
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATV-----KTRWSGAQPLEQPSGSVLWMAA 1529
++N IHRDL + N+ + E K+ DFGLA V + + ++ P V W A
Sbjct: 355 ESQNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLP---VKWTAP 411
Query: 1530 EVIRMQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKI 1706
E IR N +S +SDV+++GV+LYE++T G +PYS + + Q+I M+G+ Y P
Sbjct: 412 EAIR---ANKFSIKSDVWSFGVLLYEIITYGKMPYSGM-TGAQVIQMLGQNYRLPQ---- 463
Query: 1707 SSNCPKAMRRLLSDCLKFQREERPLFPQI 1793
+NCP ++ +C + +ERP F +
Sbjct: 464 PANCPPEFYNIMLECWNEEPKERPTFEML 492
>ref|XP_003132618.2| PREDICTED: mitogen-activated protein kinase kinase kinase 13-like
[Sus scrofa].
Length = 967
Score = 139 bits (350), Expect = 7e-33
Identities = 97/273 (35%), Positives = 145/273 (53%), Gaps = 6/273 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVAQPTAEQAQAFKNEMQVLRKT 1187
WEVP E+ L+ +G+G+ G VF G++ + VA+K ++ T +++ LRK
Sbjct: 161 WEVPFEEISELQWLGSGAQGAVFLGKFRAEEVAIKKVREQNET---------DIKHLRKL 211
Query: 1188 RHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
+H NI+ F G T+ P + II ++C LY L A + L+D + A GM+YL
Sbjct: 212 KHPNIIAFKGVCTQAPCYCIIMEYCAHGQLYEVLR-AGRKITPRLLVDWSTGIASGMNYL 270
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFG----LATVKTRWSGAQPLEQPSGSVLWMAAE 1532
H IIHRDLKS N+ + VKI DFG L+ T+ S A G+V WMA E
Sbjct: 271 HLHKIIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMSFA-------GTVAWMAPE 323
Query: 1533 VIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISS 1712
VIR + P S + D++++GVVL+EL+TG +PY + S II+ VG L + S
Sbjct: 324 VIRNE---PVSEKVDIWSFGVVLWELLTGEIPYKDVDS-SAIIWGVGSNSLH---LPVPS 376
Query: 1713 NCPKAMRRLLSDCLKFQREERPLFPQILATIEL 1811
CP + L+ + + RP F Q L +++
Sbjct: 377 TCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDI 409
>ref|XP_001928649.1| PREDICTED: proto-oncogene tyrosine-protein kinase Src [Sus scrofa].
Length = 542
Score = 137 bits (345), Expect = 3e-32
Identities = 85/270 (31%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+P ++L ++G G FG V+ G W+G V + K +P +AF E QV++K R
Sbjct: 269 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAI-KTLKPGTMSPEAFLQEAQVMKKLR 327
Query: 1191 HVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRF-DMVQLIDVARQTAQGMDYLH 1367
H ++ ++ I+T++ SL L ++ + QL+D+A Q A GM Y+
Sbjct: 328 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 387
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATV--KTRWSGAQPLEQPSGSVLWMAAEVIR 1541
N +HRDL++ NI + E L K+ DFGLA + ++ Q + P + W A E
Sbjct: 388 RMNYVHRDLRAANILVGENLACKVADFGLARLIEDNEYTARQGAKFP---IKWTAPEAAL 444
Query: 1542 MQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNC 1718
++ +SDV+++G++L EL T G +PY + +R +++ V RGY P C
Sbjct: 445 Y---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQVERGYRMP----CPPEC 496
Query: 1719 PKAMRRLLSDCLKFQREERPLFPQILATIE 1808
P+++ L+ C + EERP F + A +E
Sbjct: 497 PESLHDLMCQCWRKDPEERPTFEYLQAFLE 526
>ref|NP_001128439.1| ephrin type-A receptor 4 [Sus scrofa].
Length = 986
Score = 133 bits (335), Expect = 4e-31
Identities = 102/334 (30%), Positives = 166/334 (49%), Gaps = 15/334 (4%)
Frame = +3
Query: 915 HSKSPSEQRERKSLADDKKK-VKNLGYRDSG-----YYWEVPPSEVQLLKRIGTGSFGTV 1076
+SK+ E E K L + V Y D + E+ S +++ K IG G FG V
Sbjct: 576 YSKAKQEADEEKHLNQGVRTYVDPFTYEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEV 635
Query: 1077 FRGRWHGD------VAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PG 1235
GR VA+K LK T +Q + F +E ++ + H NI+ G +T+
Sbjct: 636 CSGRLKVPGKREIYVAIKTLKAGY-TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP 694
Query: 1236 FAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFL 1415
IIT++ E SL L D RF ++QL+ + R GM YL + +HRDL + NI +
Sbjct: 695 VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV 754
Query: 1416 HEGLTVKIGDFGLATV-KTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYG 1592
+ L K+ DFG++ V + A + W A E I + ++ SDV++YG
Sbjct: 755 NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYG 811
Query: 1593 VVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQRE 1769
+V++E+M+ G PY + ++D +I + GY P +CP A+ +L+ DC + +R
Sbjct: 812 IVMWEVMSYGERPYWDMSNQD-VIKAIEEGYRLPP----PMDCPIALHQLMLDCWQKERS 866
Query: 1770 ERPLFPQILATIELLQRSLPKIERSASEPSLHRT 1871
+RP F QI+ ++ L R+ ++R+ +E S T
Sbjct: 867 DRPKFGQIVNMLDKLIRNPNSLKRTGTESSRPNT 900
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 67,087,030
Number of extensions: 2240570
Number of successful extensions: 13101
Number of sequences better than 1.0e-05: 404
Number of HSP's gapped: 12472
Number of HSP's successfully gapped: 414
Length of query: 801
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 694
Effective length of database: 8,679,953
Effective search space: 6023887382
Effective search space used: 6023887382
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008044
(2404 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033833.1| serine/threonine-protein kinase A-Raf isoform 1... 1097 0.0
Alignment gi|NP_084056.1| RAF proto-oncogene serine/threonine-protein kin... 698 0.0
Alignment gi|NP_647455.3| serine/threonine-protein kinase B-raf [Mus musc... 494 e-139
Alignment gi|NP_001153117.1| serine/threonine-protein kinase A-Raf isofor... 369 e-102
Alignment gi|NP_038599.1| kinase suppressor of Ras 1 [Mus musculus]. 187 2e-47
Alignment gi|NP_001108017.1| kinase suppressor of Ras 2 isoform 1 [Mus mu... 179 1e-44
Alignment gi|NP_001157115.1| mitogen-activated protein kinase kinase kina... 147 4e-35
Alignment gi|NP_033608.3| mitogen-activated protein kinase kinase kinase ... 147 4e-35
Alignment gi|NP_001116365.1| tyrosine-protein kinase Fyn isoform a [Mus m... 146 8e-35
Alignment gi|NP_001153016.1| tyrosine-protein kinase FRK [Mus musculus]. 143 7e-34
>ref|NP_033833.1| serine/threonine-protein kinase A-Raf isoform 1 [Mus musculus].
Length = 604
Score = 1097 bits (2838), Expect = 0.0
Identities = 545/597 (91%), Positives = 553/597 (92%)
Frame = +3
Query: 105 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 284
MEPPRGPP +GAEPSRAVGTVKVYLPNKQRTVVTVR+GMSVYDSLDKALKVRGLNQDCCV
Sbjct: 1 MEPPRGPPVSGAEPSRAVGTVKVYLPNKQRTVVTVREGMSVYDSLDKALKVRGLNQDCCV 60
Query: 285 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 464
VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF
Sbjct: 61 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 120
Query: 465 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 644
HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHS+QDLSGGSRQ E PSN +NE L
Sbjct: 121 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSIQDLSGGSRQQEAPSNLSVNELL 180
Query: 645 TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN 824
TPQGPS TQ RD EHF FPAPAN PLQRIRSTSTPNVHMVSTTAPMDS L+Q TAQSF+
Sbjct: 181 TPQGPSPFTQQRDQEHFSFPAPANPPLQRIRSTSTPNVHMVSTTAPMDSSLMQFTAQSFS 240
Query: 825 TDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSG 1004
TD HSK PSEQRERKSLAD+KKKVKNLGYRDSG
Sbjct: 241 TD--AAGRGGDGAPRGSPSPASVSSGRKSPHSKLPSEQRERKSLADEKKKVKNLGYRDSG 298
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK
Sbjct: 299 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 358
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL
Sbjct: 359 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 418
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM
Sbjct: 419 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 478
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKI SNCPK
Sbjct: 479 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKIFSNCPK 538
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 1895
AMRRLL+DCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC
Sbjct: 539 AMRRLLTDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 595
>ref|NP_084056.1| RAF proto-oncogene serine/threonine-protein kinase [Mus musculus].
Length = 648
Score = 698 bits (1801), Expect = 0.0
Identities = 357/595 (60%), Positives = 430/595 (72%), Gaps = 10/595 (1%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+ S+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DSSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLQEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPS--NRPLNEPLTPQGPSS 665
YKFH+HCS+KVPT+CVD S N RQ G S PS R + E ++ SS
Sbjct: 170 YKFHEHCSTKVPTMCVDWS-NIRQLLLFPNSTVGDSGVPAPPSFPMRRMRESVSRMPASS 228
Query: 666 CTQHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDX 833
++ P F F P+ + QR RSTSTPNVHMVSTT +DS +++ +S +
Sbjct: 229 QHRYSTPHAFTFNTSSPSSEGSLSQRQRSTSTPNVHMVSTTLHVDSRMIEDAIRSHSESA 288
Query: 834 XXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSGYYW 1013
++P S +K K++ G RDS YYW
Sbjct: 289 SPSALSSSPNNLSPTGWSQPKTPVPAQRERAPG------SGTQEKNKIRPRGQRDSSYYW 342
Query: 1014 EVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRH 1193
E+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRKTRH
Sbjct: 343 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQLQAFRNEVAVLRKTRH 402
Query: 1194 VNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAK 1373
VNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYLHAK
Sbjct: 403 VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK 462
Query: 1374 NIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDP 1553
NIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GSVLWMA EVIRMQD
Sbjct: 463 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDD 522
Query: 1554 NPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPKAMR 1733
NP+SFQSDVY+YG+VLYELM G LPY+HI +RDQIIFMVGRGY SPDLS++ NCPKAM+
Sbjct: 523 NPFSFQSDVYSYGIVLYELMAGELPYAHINNRDQIIFMVGRGYASPDLSRLYKNCPKAMK 582
Query: 1734 RLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 583 RLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 637
>ref|NP_647455.3| serine/threonine-protein kinase B-raf [Mus musculus].
Length = 804
Score = 494 bits (1272), Expect = e-139
Identities = 240/333 (72%), Positives = 285/333 (85%), Gaps = 8/333 (2%)
Frame = +3
Query: 921 KSPSEQRERKSLA----DDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGR 1088
KSP QRERKS + +D+ ++K LG RDS WE+P ++ + +RIG+GSFGTV++G+
Sbjct: 453 KSPGPQRERKSSSSSSSEDRSRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGK 512
Query: 1089 WHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGS 1268
WHGDVAVK+L V PT +Q QAFKNE+ VLRKTRHVNILLFMG+ T+P AI+TQWCEGS
Sbjct: 513 WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGS 572
Query: 1269 SLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDF 1448
SLYHHLH+ +T+F+M++LID+ARQTAQGMDYLHAK+IIHRDLKSNNIFLHE LTVKIGDF
Sbjct: 573 SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 632
Query: 1449 GLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLP 1628
GLATVK+RWSG+ EQ SGS+LWMA EVIRMQD NPYSFQSDVYA+G+VLYELMTG LP
Sbjct: 633 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 692
Query: 1629 YSHIGSRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIE 1808
YS+I +RDQIIFMVGRGYLSPDLSK+ SNCPKAM+RL+++CLK +R+ERPLFPQILA+IE
Sbjct: 693 YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 752
Query: 1809 LLQRSLPKIERSASEPSLHR----TQADELPAC 1895
LL RSLPKI RSASEPSL+R T+ L AC
Sbjct: 753 LLARSLPKIHRSASEPSLNRAGFQTEDFSLYAC 785
Score = 199 bits (506), Expect = 8e-51
Identities = 112/233 (48%), Positives = 136/233 (58%), Gaps = 14/233 (6%)
Frame = +3
Query: 132 NGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGRK 311
N P + + V+V+LPNKQRTVV R G++V DSL KAL +RGL +CC VYR+ G K
Sbjct: 132 NPKSPQKPI--VRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQDGEK 189
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
WDT I+ L GEEL VEVLE+VPLT HNFVRKTFF+LAFCDFC K LF GFRCQTCG
Sbjct: 190 KPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCG 249
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQF------YHSVQDLSGGSRQHETPSNRPLNEPLTPQ 653
YKFHQ CS++VP +CV+ F +H V + PS P
Sbjct: 250 YKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPVPQEEASFPETALPSGSSSAPPSDST 309
Query: 654 GPSSCTQHRDPEHFPFPAP--------ANAPLQRIRSTSTPNVHMVSTTAPMD 788
GP T + P P P N QR RS+S PNVH ++T P++
Sbjct: 310 GPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVH-INTIEPVN 361
>ref|NP_001153117.1| serine/threonine-protein kinase A-Raf isoform 2 [Mus musculus].
Length = 186
Score = 369 bits (947), Expect = e-102
Identities = 175/185 (94%), Positives = 179/185 (96%)
Frame = +3
Query: 105 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 284
MEPPRGPP +GAEPSRAVGTVKVYLPNKQRTVVTVR+GMSVYDSLDKALKVRGLNQDCCV
Sbjct: 1 MEPPRGPPVSGAEPSRAVGTVKVYLPNKQRTVVTVREGMSVYDSLDKALKVRGLNQDCCV 60
Query: 285 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 464
VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF
Sbjct: 61 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 120
Query: 465 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 644
HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHS+QDLSGGSRQ E PSN +NE L
Sbjct: 121 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSIQDLSGGSRQQEAPSNLSVNELL 180
Query: 645 TPQGP 659
TPQGP
Sbjct: 181 TPQGP 185
>ref|NP_038599.1| kinase suppressor of Ras 1 [Mus musculus].
Length = 873
Score = 187 bits (476), Expect = 2e-47
Identities = 158/556 (28%), Positives = 248/556 (44%), Gaps = 53/556 (9%)
Frame = +3
Query: 372 VLEDVPLTM-HNFVRKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVD-M 545
V D+ L++ H F K++ S C+ C K + G +C+ C K H C+ + P + +
Sbjct: 324 VRRDIGLSVTHRFSTKSWLSQV-CNVCQKSMIFGVKCKHCRLKCHNKCTKEAPACRITFL 382
Query: 546 STNRRQFYHSV-QDLSGGSRQHETPSNRPLNEPLTPQ------------GPSSCTQHRDP 686
R + SV D++ + P L + LT + PSS T
Sbjct: 383 PLARLRRTESVPSDINNPVDRAAEPHFGTLPKALTKKEHPPAMNLDSSSNPSSTTSSTPS 442
Query: 687 EHFPFPAPAN----------APLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDXX 836
PF +N +P QR S P++ S AP+ S TA S D
Sbjct: 443 SPAPFLTSSNPSSATTPPNPSPGQRDSRFSFPDISACSQAAPLSS-----TADSTRLDDQ 497
Query: 837 XXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKK-------------- 974
H E KS A+D ++
Sbjct: 498 PKTDVLGV------------------HEAEAEEPEAGKSEAEDDEEDEVDDLPSSRRPWR 539
Query: 975 --VKNLGYRDSGYY--WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAE 1142
+ + S Y W++P +V+L + IG G +G V RGRWHG+VA+++L++ +
Sbjct: 540 GPISRKASQTSVYLQEWDIPFEQVELGEPIGQGRWGRVHRGRWHGEVAIRLLEMDGHNQD 599
Query: 1143 QAQAFKNEMQVLRKTRHVNILLFMG-FMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQ 1319
+ FK E+ R+TRH N++LFMG M P AIIT +C+G +L+ + T D+ +
Sbjct: 600 HLKLFKKEVMNYRQTRHENVVLFMGACMNPPHLAIITSFCKGRTLHSFVRDPKTSLDINK 659
Query: 1320 LIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTV--KIGDFGLATVKTRWSGAQPL 1493
+A++ +GM YLHAK I+H+DLKS N+F G V G FG++ V L
Sbjct: 660 TRQIAQEIIKGMGYLHAKGIVHKDLKSKNVFYDNGKVVITDFGLFGISGVVREERRENQL 719
Query: 1494 EQPSGSVLWMAAEVIRM------QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQ 1655
+ + ++A E++R +D P+S +DVYA+G V YEL P+ H +
Sbjct: 720 KLSHDWLCYLAPEIVREMIPGRDEDQLPFSKAADVYAFGTVWYELQARDWPFKH-QPAEA 778
Query: 1656 IIFMVGRGY-LSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPK 1832
+I+ +G G + L+ +S K + +LS C F +ERP F ++ ++L+R LPK
Sbjct: 779 LIWQIGSGEGVRRVLASVSLG--KEVGEILSACWAFDLQERPSFSLLM---DMLER-LPK 832
Query: 1833 IERSASEPSLHRTQAD 1880
+ R S P AD
Sbjct: 833 LNRRLSHPGHFWKSAD 848
>ref|NP_001108017.1| kinase suppressor of Ras 2 isoform 1 [Mus musculus].
Length = 951
Score = 179 bits (453), Expect = 1e-44
Identities = 106/292 (36%), Positives = 166/292 (56%), Gaps = 10/292 (3%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
W++P ++++ + IG G FG V+ GRWHG+VA++++ + + +Q +AFK E+ R+TR
Sbjct: 660 WDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTR 719
Query: 1191 HVNILLFMG-FMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLH 1367
H N++LFMG M+ P AIIT C+G +LY + A D+ + +A++ +GM YLH
Sbjct: 720 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 779
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQ---PLEQPSGSVLWMAAEVI 1538
AK I+H+DLKS N+F G V I DFGL ++ + L +G + +A E+I
Sbjct: 780 AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRRDDKLRIQNGWLCHLAPEII 838
Query: 1539 RMQDPN------PYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLS 1700
R P+ P+S SDV+A G + YEL P+ + II+ +G G + P+LS
Sbjct: 839 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEAIIWQMGTG-MKPNLS 896
Query: 1701 KISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEP 1856
+I K + +L C F++EERP F +++ +E LPK R S P
Sbjct: 897 QIGMG--KEISDILLFCWAFEQEERPTFTKLMDMLE----KLPKRNRRLSHP 942
>ref|NP_001157115.1| mitogen-activated protein kinase kinase kinase 12 [Mus musculus].
Length = 888
Score = 147 bits (371), Expect = 4e-35
Identities = 103/273 (37%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVAQPTAEQAQAFKNEMQVLRKT 1187
WEVP E+ L+ +G+G+ G VF GR+HG+ VAVK ++ + T +++ LRK
Sbjct: 151 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKL 201
Query: 1188 RHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
+H NI+ F G T+ P + I+ ++C LY L A L+D + A GM+YL
Sbjct: 202 KHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSMGIAGGMNYL 260
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFG----LATVKTRWSGAQPLEQPSGSVLWMAAE 1532
H IIHRDLKS N+ + VKI DFG L+ T+ S A G+V WMA E
Sbjct: 261 HLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFA-------GTVAWMAPE 313
Query: 1533 VIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISS 1712
VIR + P S + D++++GVVL+EL+TG +PY + S II+ VG L + S
Sbjct: 314 VIRNE---PVSEKVDIWSFGVVLWELLTGEIPYKDVDS-SAIIWGVGSNSLH---LPVPS 366
Query: 1713 NCPKAMRRLLSDCLKFQREERPLFPQILATIEL 1811
+CP + LL C + RP F QIL +++
Sbjct: 367 SCPDGFKILLRQCWNSKPRNRPSFRQILLHLDI 399
>ref|NP_033608.3| mitogen-activated protein kinase kinase kinase 12 [Mus musculus].
Length = 888
Score = 147 bits (371), Expect = 4e-35
Identities = 103/273 (37%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVAQPTAEQAQAFKNEMQVLRKT 1187
WEVP E+ L+ +G+G+ G VF GR+HG+ VAVK ++ + T +++ LRK
Sbjct: 151 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKL 201
Query: 1188 RHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
+H NI+ F G T+ P + I+ ++C LY L A L+D + A GM+YL
Sbjct: 202 KHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSMGIAGGMNYL 260
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFG----LATVKTRWSGAQPLEQPSGSVLWMAAE 1532
H IIHRDLKS N+ + VKI DFG L+ T+ S A G+V WMA E
Sbjct: 261 HLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFA-------GTVAWMAPE 313
Query: 1533 VIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISS 1712
VIR + P S + D++++GVVL+EL+TG +PY + S II+ VG L + S
Sbjct: 314 VIRNE---PVSEKVDIWSFGVVLWELLTGEIPYKDVDS-SAIIWGVGSNSLH---LPVPS 366
Query: 1713 NCPKAMRRLLSDCLKFQREERPLFPQILATIEL 1811
+CP + LL C + RP F QIL +++
Sbjct: 367 SCPDGFKILLRQCWNSKPRNRPSFRQILLHLDI 399
>ref|NP_001116365.1| tyrosine-protein kinase Fyn isoform a [Mus musculus].
Length = 537
Score = 146 bits (368), Expect = 8e-35
Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 4/270 (1%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+P +QL+KR+G G FG V+ G W+G+ V + K +P ++F E Q+++K +
Sbjct: 264 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAI-KTLKPGTMSPESFLEEAQIMKKLK 322
Query: 1191 HVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTR-FDMVQLIDVARQTAQGMDYLH 1367
H ++ ++ I+T++ SL L + R + L+D+A Q A GM Y+
Sbjct: 323 HDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 382
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATV--KTRWSGAQPLEQPSGSVLWMAAEVIR 1541
N IHRDL+S NI + GL KI DFGLA + ++ Q + P + W A E
Sbjct: 383 RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFP---IKWTAPEAAL 439
Query: 1542 MQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNC 1718
++ +SDV+++G++L EL+T G +PY + +R +++ V RGY P +C
Sbjct: 440 Y---GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLEQVERGYRMP----CPQDC 491
Query: 1719 PKAMRRLLSDCLKFQREERPLFPQILATIE 1808
P ++ L+ C K EERP F + +E
Sbjct: 492 PISLHELMIHCWKKDPEERPTFEYLQGFLE 521
>ref|NP_001153016.1| tyrosine-protein kinase FRK [Mus musculus].
Length = 512
Score = 143 bits (360), Expect = 7e-34
Identities = 88/266 (33%), Positives = 143/266 (53%), Gaps = 8/266 (3%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+ + +QLLKR+G+G FG V+ G W+ V V K +P + F E Q+++ R
Sbjct: 234 WEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAV-KTLKPGSMDPNDFLREAQIMKSLR 292
Query: 1191 HVNILLFMGFMT-RPGFAIITQWCEGSSLYHHL-HVADTRFDMVQLIDVARQTAQGMDYL 1364
H ++ T IIT+ SL +L + ++ ++Q +D+A Q A GM YL
Sbjct: 293 HPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDGGSKIHLIQQVDMAAQVASGMAYL 352
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATV-----KTRWSGAQPLEQPSGSVLWMAA 1529
++N IHRDL + N+ + E K+ DFGLA V + + ++ P V W A
Sbjct: 353 ESQNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESKHEIKLP---VKWTAP 409
Query: 1530 EVIRMQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKI 1706
E IR N +S +SDV+++G++LYE++T G +PYS + + Q+I M+ + Y P
Sbjct: 410 EAIR---TNKFSIKSDVWSFGILLYEIITYGKMPYSGM-TGAQVIQMLSQNYRLPQ---- 461
Query: 1707 SSNCPKAMRRLLSDCLKFQREERPLF 1784
SNCP+ ++ +C + ++RP F
Sbjct: 462 PSNCPQQFYSIMLECWNVEPKQRPTF 487
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 88,659,689
Number of extensions: 2821199
Number of successful extensions: 15968
Number of sequences better than 1.0e-05: 666
Number of HSP's gapped: 14861
Number of HSP's successfully gapped: 683
Length of query: 801
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 692
Effective length of database: 12,343,635
Effective search space: 8541795420
Effective search space used: 8541795420
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008044
(2404 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001645.1| serine/threonine-protein kinase A-Raf [Homo sap... 1127 0.0
Alignment gi|NP_002871.1| RAF proto-oncogene serine/threonine-protein kin... 708 0.0
Alignment gi|NP_004324.2| serine/threonine-protein kinase B-raf [Homo sap... 668 0.0
Alignment gi|NP_775869.3| kinase suppressor of Ras 2 [Homo sapiens]. 179 1e-44
Alignment gi|NP_055053.1| kinase suppressor of Ras 1 [Homo sapiens]. 178 2e-44
Alignment gi|NP_001180440.1| mitogen-activated protein kinase kinase kina... 147 4e-35
Alignment gi|NP_006292.3| mitogen-activated protein kinase kinase kinase ... 147 4e-35
Alignment gi|NP_002028.1| tyrosine-protein kinase Fyn isoform a [Homo sap... 146 7e-35
Alignment gi|NP_002022.1| tyrosine-protein kinase FRK [Homo sapiens]. 144 5e-34
Alignment gi|NP_005424.1| tyrosine-protein kinase Yes [Homo sapiens]. 139 1e-32
>ref|NP_001645.1| serine/threonine-protein kinase A-Raf [Homo sapiens].
Length = 606
Score = 1127 bits (2915), Expect = 0.0
Identities = 556/597 (93%), Positives = 561/597 (93%)
Frame = +3
Query: 105 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 284
MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV
Sbjct: 1 MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCV 60
Query: 285 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 464
VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF
Sbjct: 61 VYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLF 120
Query: 465 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPSNRPLNEPL 644
HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNR+QFYHSVQDLSGGSRQHE PSNRPLNE L
Sbjct: 121 HGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRQQFYHSVQDLSGGSRQHEAPSNRPLNELL 180
Query: 645 TPQGPSSCTQHRDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFN 824
TPQGPS TQH DPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDS L+QLT QSF+
Sbjct: 181 TPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSNLIQLTGQSFS 240
Query: 825 TDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLADDKKKVKNLGYRDSG 1004
TD HSKSP+EQRERKSLADDKKKVKNLGYRDSG
Sbjct: 241 TDAAGSRGGSDGTPRGSPSPASVSSGRKSPHSKSPAEQRERKSLADDKKKVKNLGYRDSG 300
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKV+QPTAEQAQAFKNEMQVLRK
Sbjct: 301 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVSQPTAEQAQAFKNEMQVLRK 360
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL
Sbjct: 361 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 420
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM
Sbjct: 421 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 480
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIG RDQIIFMVGRGYLSPDLSKISSNCPK
Sbjct: 481 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGCRDQIIFMVGRGYLSPDLSKISSNCPK 540
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 1895
AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC
Sbjct: 541 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPAC 597
>ref|NP_002871.1| RAF proto-oncogene serine/threonine-protein kinase [Homo sapiens].
Length = 648
Score = 708 bits (1827), Expect = 0.0
Identities = 366/598 (61%), Positives = 438/598 (73%), Gaps = 13/598 (2%)
Frame = +3
Query: 141 EPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLI---KGRK 311
+PS+ T++V+LPNKQRTVV VR+GMS++D L KALKVRGL +CC V+RL+ KG+K
Sbjct: 50 DPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKK 109
Query: 312 TVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCG 491
W+T A L GEEL V+ L+ VPLT HNF RKTF LAFCD C KFL +GFRCQTCG
Sbjct: 110 ARLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCG 169
Query: 492 YKFHQHCSSKVPTVCVDMSTNRRQFYHSVQDLSGGSRQHETPS--NRPLNEPLTPQGPSS 665
YKFH+HCS+KVPT+CVD S N RQ G S PS R + E ++ SS
Sbjct: 170 YKFHEHCSTKVPTMCVDWS-NIRQLLLFPNSTIGDSGVPALPSLTMRRMRESVSRMPVSS 228
Query: 666 CTQHRDPEHFPF----PAPANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQLTAQSFNTDX 833
++ P F F P+ + QR RSTSTPNVHMVSTT P+DS +++ +S +
Sbjct: 229 QHRYSTPHAFTFNTSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEDAIRSHSES- 287
Query: 834 XXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSP-SEQRERKSLA--DDKKKVKNLGYRDSG 1004
K+P QRER ++ +K K++ G RDS
Sbjct: 288 --------ASPSALSSSPNNLSPTGWSQPKTPVPAQRERAPVSGTQEKNKIRPRGQRDSS 339
Query: 1005 YYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRK 1184
YYWE+ SEV L RIG+GSFGTV++G+WHGDVAVK+LKV PT EQ QAF+NE+ VLRK
Sbjct: 340 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK 399
Query: 1185 TRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
TRHVNILLFMG+MT+ AI+TQWCEGSSLY HLHV +T+F M QLID+ARQTAQGMDYL
Sbjct: 400 TRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 459
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRM 1544
HAKNIIHRD+KSNNIFLHEGLTVKIGDFGLATVK+RWSG+Q +EQP+GSVLWMA EVIRM
Sbjct: 460 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 519
Query: 1545 QDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNCPK 1724
QD NP+SFQSDVY+YG+VLYELMTG LPYSHI +RDQIIFMVGRGY SPDLSK+ NCPK
Sbjct: 520 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 579
Query: 1725 AMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR-TQADELPAC 1895
AM+RL++DC+K +EERPLFPQIL++IELLQ SLPKI RSASEPSLHR +++ AC
Sbjct: 580 AMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINAC 637
>ref|NP_004324.2| serine/threonine-protein kinase B-raf [Homo sapiens].
Length = 766
Score = 668 bits (1723), Expect = 0.0
Identities = 353/610 (57%), Positives = 428/610 (70%), Gaps = 21/610 (3%)
Frame = +3
Query: 129 ANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGR 308
+N P + + V+V+LPNKQRTVV R G++V DSL KAL +RGL +CC VYR+ G
Sbjct: 147 SNPKSPQKPI--VRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQDGE 204
Query: 309 KTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTC 488
K WDT I+ L GEEL VEVLE+VPLT HNFVRKTFF+LAFCDFC K LF GFRCQTC
Sbjct: 205 KKPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTC 264
Query: 489 GYKFHQHCSSKVPTVCVDMSTNRRQF------YHSVQDLSGGSRQHETPSNRPLNEPLTP 650
GYKFHQ CS++VP +CV+ F +H + + S + P +
Sbjct: 265 GYKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPIPQEEASLAETALTSGSSPSAPASD 324
Query: 651 Q-GPSSCTQHRDPEHFPFPAP--------ANAPLQRIRSTSTPNVHMVSTTAPMDSGLVQ 803
GP T + P P P N QR RS+S PNVH ++T P++ +
Sbjct: 325 SIGPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVH-INTIEPVNIDDL- 382
Query: 804 LTAQSFNTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLA--DDKKKV 977
+ Q F D KSP QRERKS + +D+ ++
Sbjct: 383 IRDQGFRGDGGSTTGLSATPPASLPGSLTNVKAL----QKSPGPQRERKSSSSSEDRNRM 438
Query: 978 KNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAF 1157
K LG RDS WE+P ++ + +RIG+GSFGTV++G+WHGDVAVK+L V PT +Q QAF
Sbjct: 439 KTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAF 498
Query: 1158 KNEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVAR 1337
KNE+ VLRKTRHVNILLFMG+ T+P AI+TQWCEGSSLYHHLH+ +T+F+M++LID+AR
Sbjct: 499 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 558
Query: 1338 QTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVL 1517
QTAQGMDYLHAK+IIHRDLKSNNIFLHE LTVKIGDFGLATVK+RWSG+ EQ SGS+L
Sbjct: 559 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 618
Query: 1518 WMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDL 1697
WMA EVIRMQD NPYSFQSDVYA+G+VLYELMTG LPYS+I +RDQIIFMVGRGYLSPDL
Sbjct: 619 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 678
Query: 1698 SKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHR--- 1868
SK+ SNCPKAM+RL+++CLK +R+ERPLFPQILA+IELL RSLPKI RSASEPSL+R
Sbjct: 679 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGF 738
Query: 1869 -TQADELPAC 1895
T+ L AC
Sbjct: 739 QTEDFSLYAC 748
>ref|NP_775869.3| kinase suppressor of Ras 2 [Homo sapiens].
Length = 921
Score = 179 bits (453), Expect = 1e-44
Identities = 106/292 (36%), Positives = 166/292 (56%), Gaps = 10/292 (3%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
W++P ++++ + IG G FG V+ GRWHG+VA++++ + + +Q +AFK E+ R+TR
Sbjct: 630 WDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTR 689
Query: 1191 HVNILLFMG-FMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLH 1367
H N++LFMG M+ P AIIT C+G +LY + A D+ + +A++ +GM YLH
Sbjct: 690 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 749
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQ---PLEQPSGSVLWMAAEVI 1538
AK I+H+DLKS N+F G V I DFGL ++ + L +G + +A E+I
Sbjct: 750 AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 808
Query: 1539 RMQDPN------PYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLS 1700
R P+ P+S SDV+A G + YEL P+ + II+ +G G + P+LS
Sbjct: 809 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEAIIWQMGTG-MKPNLS 866
Query: 1701 KISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEP 1856
+I K + +L C F++EERP F +++ +E LPK R S P
Sbjct: 867 QIGMG--KEISDILLFCWAFEQEERPTFTKLMDMLE----KLPKRNRRLSHP 912
>ref|NP_055053.1| kinase suppressor of Ras 1 [Homo sapiens].
Length = 762
Score = 178 bits (452), Expect = 2e-44
Identities = 153/561 (27%), Positives = 239/561 (42%), Gaps = 66/561 (11%)
Frame = +3
Query: 372 VLEDVPLTM-HNFVRKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVDMS 548
V D+ L++ H F K++ S C C K + G +C+ C K H C+ + P +
Sbjct: 201 VRRDIGLSVTHRFSTKSWLSQV-CHVCQKSMIFGVKCKHCRLKCHNKCTKEAPACRISFL 259
Query: 549 --TNRRQFYHSVQDLSGGSRQHETPSNRPLNEPLTPQ-------------GPSSCTQHRD 683
T R+ D++ + P L + LT + PSS T
Sbjct: 260 PLTRLRRTESVPSDINNPVDRAAEPHFGTLPKALTKKEHPPAMNHLDSSSNPSSTTSSTP 319
Query: 684 PEHFPFPAPAN----------APLQRIRSTSTPNVHMVSTTA----PMDSG--------- 794
PFP +N +P QR + P + + P+ S
Sbjct: 320 SSPAPFPTSSNPSSATTPPNPSPGQRDSRFNFPAAYFIHHRQQFIFPVPSAGHCWKCLLI 379
Query: 795 LVQLTAQSFNTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSKSPSEQRERKSLA-DDKK 971
L +FN H E KS A DD+
Sbjct: 380 AESLKENAFNISAFAHAAPLPEAADGTRLDDQPKADVLEAHEAEAEEPEAGKSEAEDDED 439
Query: 972 KVKNL--------------GYRDSGYY--WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDV 1103
+V +L + S Y W++P +V+L + IG G +G V RGRWHG+V
Sbjct: 440 EVDDLPSSRRPWRGPISRKASQTSVYLQEWDIPFEQVELGEPIGQGRWGRVHRGRWHGEV 499
Query: 1104 AVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMG-FMTRPGFAIITQWCEGSSLYH 1280
A+++L++ + + FK E+ R+TRH N++LFMG M P AIIT +C+G +L+
Sbjct: 500 AIRLLEMDGHNQDHLKLFKKEVMNYRQTRHENVVLFMGACMNPPHLAIITSFCKGRTLHS 559
Query: 1281 HLHVADTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTV--KIGDFGL 1454
+ T D+ + +A++ +GM YLHAK I+H+DLKS N+F G V G FG+
Sbjct: 560 FVRDPKTSLDINKTRQIAQEIIKGMGYLHAKGIVHKDLKSKNVFYDNGKVVITDFGLFGI 619
Query: 1455 ATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPN------PYSFQSDVYAYGVVLYELMT 1616
+ V L+ + ++A E++R P P+S +DVYA+G V YEL
Sbjct: 620 SGVVREGRRENQLKLSHDWLCYLAPEIVREMTPGKDEDQLPFSKAADVYAFGTVWYELQA 679
Query: 1617 GSLPYSHIGSRDQIIFMVGRGY-LSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQI 1793
P + + + I+ +G G + L+ +S K + +LS C F +ERP F +
Sbjct: 680 RDWPLKN-QAAEASIWQIGSGEGMKRVLTSVSLG--KEVSEILSACWAFDLQERPSFSLL 736
Query: 1794 LATIELLQRSLPKIERSASEP 1856
+ +E LPK+ R S P
Sbjct: 737 MDMLE----KLPKLNRRLSHP 753
>ref|NP_001180440.1| mitogen-activated protein kinase kinase kinase 12 isoform 1 [Homo
sapiens].
Length = 892
Score = 147 bits (371), Expect = 4e-35
Identities = 103/273 (37%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVAQPTAEQAQAFKNEMQVLRKT 1187
WEVP E+ L+ +G+G+ G VF GR+HG+ VAVK ++ + T +++ LRK
Sbjct: 151 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKL 201
Query: 1188 RHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
+H NI+ F G T+ P + I+ ++C LY L A L+D + A GM+YL
Sbjct: 202 KHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSMGIAGGMNYL 260
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFG----LATVKTRWSGAQPLEQPSGSVLWMAAE 1532
H IIHRDLKS N+ + VKI DFG L+ T+ S A G+V WMA E
Sbjct: 261 HLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFA-------GTVAWMAPE 313
Query: 1533 VIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISS 1712
VIR + P S + D++++GVVL+EL+TG +PY + S II+ VG L + S
Sbjct: 314 VIRNE---PVSEKVDIWSFGVVLWELLTGEIPYKDVDS-SAIIWGVGSNSLH---LPVPS 366
Query: 1713 NCPKAMRRLLSDCLKFQREERPLFPQILATIEL 1811
+CP + LL C + RP F QIL +++
Sbjct: 367 SCPDGFKILLRQCWNSKPRNRPSFRQILLHLDI 399
>ref|NP_006292.3| mitogen-activated protein kinase kinase kinase 12 isoform 2 [Homo
sapiens].
Length = 859
Score = 147 bits (371), Expect = 4e-35
Identities = 103/273 (37%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVAQPTAEQAQAFKNEMQVLRKT 1187
WEVP E+ L+ +G+G+ G VF GR+HG+ VAVK ++ + T +++ LRK
Sbjct: 118 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKL 168
Query: 1188 RHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYL 1364
+H NI+ F G T+ P + I+ ++C LY L A L+D + A GM+YL
Sbjct: 169 KHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSMGIAGGMNYL 227
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFG----LATVKTRWSGAQPLEQPSGSVLWMAAE 1532
H IIHRDLKS N+ + VKI DFG L+ T+ S A G+V WMA E
Sbjct: 228 HLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFA-------GTVAWMAPE 280
Query: 1533 VIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGSRDQIIFMVGRGYLSPDLSKISS 1712
VIR + P S + D++++GVVL+EL+TG +PY + S II+ VG L + S
Sbjct: 281 VIRNE---PVSEKVDIWSFGVVLWELLTGEIPYKDVDS-SAIIWGVGSNSLH---LPVPS 333
Query: 1713 NCPKAMRRLLSDCLKFQREERPLFPQILATIEL 1811
+CP + LL C + RP F QIL +++
Sbjct: 334 SCPDGFKILLRQCWNSKPRNRPSFRQILLHLDI 366
>ref|NP_002028.1| tyrosine-protein kinase Fyn isoform a [Homo sapiens].
Length = 537
Score = 146 bits (369), Expect = 7e-35
Identities = 88/270 (32%), Positives = 144/270 (53%), Gaps = 4/270 (1%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+P +QL+KR+G G FG V+ G W+G+ V + K +P ++F E Q+++K +
Sbjct: 264 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAI-KTLKPGTMSPESFLEEAQIMKKLK 322
Query: 1191 HVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTR-FDMVQLIDVARQTAQGMDYLH 1367
H ++ ++ I+T++ SL L + R + L+D+A Q A GM Y+
Sbjct: 323 HDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 382
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATV--KTRWSGAQPLEQPSGSVLWMAAEVIR 1541
N IHRDL+S NI + GL KI DFGLA + ++ Q + P + W A E
Sbjct: 383 RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFP---IKWTAPEAAL 439
Query: 1542 MQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNC 1718
++ +SDV+++G++L EL+T G +PY + +R +++ V RGY P +C
Sbjct: 440 Y---GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLEQVERGYRMP----CPQDC 491
Query: 1719 PKAMRRLLSDCLKFQREERPLFPQILATIE 1808
P ++ L+ C K EERP F + + +E
Sbjct: 492 PISLHELMIHCWKKDPEERPTFEYLQSFLE 521
>ref|NP_002022.1| tyrosine-protein kinase FRK [Homo sapiens].
Length = 505
Score = 144 bits (362), Expect = 5e-34
Identities = 90/274 (32%), Positives = 145/274 (52%), Gaps = 8/274 (2%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+ + +QLLKR+G+G FG V+ G W+ V V K +P + F E Q+++ R
Sbjct: 227 WEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAV-KTLKPGSMDPNDFLREAQIMKNLR 285
Query: 1191 HVNILLFMGFMT-RPGFAIITQWCEGSSLYHHL-HVADTRFDMVQLIDVARQTAQGMDYL 1364
H ++ T IIT+ SL +L + ++ + Q +D+A Q A GM YL
Sbjct: 286 HPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYL 345
Query: 1365 HAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATV-----KTRWSGAQPLEQPSGSVLWMAA 1529
++N IHRDL + N+ + E K+ DFGLA V + + ++ P V W A
Sbjct: 346 ESRNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESRHEIKLP---VKWTAP 402
Query: 1530 EVIRMQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKI 1706
E IR N +S +SDV+++G++LYE++T G +PYS + + Q+I M+ + Y P
Sbjct: 403 EAIR---SNKFSIKSDVWSFGILLYEIITYGKMPYSGM-TGAQVIQMLAQNYRLPQ---- 454
Query: 1707 SSNCPKAMRRLLSDCLKFQREERPLFPQILATIE 1808
SNCP+ ++ +C + +ERP F + +E
Sbjct: 455 PSNCPQQFYNIMLECWNAEPKERPTFETLRWKLE 488
>ref|NP_005424.1| tyrosine-protein kinase Yes [Homo sapiens].
Length = 543
Score = 139 bits (350), Expect = 1e-32
Identities = 86/270 (31%), Positives = 143/270 (52%), Gaps = 4/270 (1%)
Frame = +3
Query: 1011 WEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVAQPTAEQAQAFKNEMQVLRKTR 1190
WE+P ++L ++G G FG V+ G W+G V + K +P +AF E Q+++K R
Sbjct: 270 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTKVAI-KTLKPGTMMPEAFLQEAQIMKKLR 328
Query: 1191 HVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRF-DMVQLIDVARQTAQGMDYLH 1367
H ++ ++ I+T++ SL L D ++ + QL+D+A Q A GM Y+
Sbjct: 329 HDKLVPLYAVVSEEPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE 388
Query: 1368 AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATV--KTRWSGAQPLEQPSGSVLWMAAEVIR 1541
N IHRDL++ NI + E L KI DFGLA + ++ Q + P + W A E
Sbjct: 389 RMNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFP---IKWTAPEAAL 445
Query: 1542 MQDPNPYSFQSDVYAYGVVLYELMT-GSLPYSHIGSRDQIIFMVGRGYLSPDLSKISSNC 1718
++ +SDV+++G++ EL+T G +PY + +R +++ V RGY P C
Sbjct: 446 Y---GRFTIKSDVWSFGILQTELVTKGRVPYPGMVNR-EVLEQVERGYRMP----CPQGC 497
Query: 1719 PKAMRRLLSDCLKFQREERPLFPQILATIE 1808
P+++ L++ C K +ERP F I + +E
Sbjct: 498 PESLHELMNLCWKKDPDERPTFEYIQSFLE 527
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 105,578,732
Number of extensions: 3426220
Number of successful extensions: 19946
Number of sequences better than 1.0e-05: 781
Number of HSP's gapped: 18637
Number of HSP's successfully gapped: 799
Length of query: 801
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 690
Effective length of database: 14,638,160
Effective search space: 10100330400
Effective search space used: 10100330400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008044
(2404 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_ChrX 1146 0.0
Sscrofa_Chr13 60 6e-06
>Sscrofa_ChrX
|| Length = 144288218
Score = 1146 bits (578), Expect = 0.0
Identities = 592/599 (98%)
Strand = Plus / Minus
Query: 1784 cccccagatcctggccacgattgagctgctgcagcggtcactccccaagattgagcggag 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47389238 cccccagatcctggccacgattgagctgctgcagcggtcactccccaagattgagcggag 47389179
Query: 1844 tgcctcggaaccctccttgcaccgaacccaggctgatgagttgcctgcctgcctactcag 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47389178 tgcctcggaaccctccttgcaccgaacccaggctgatgagttgcctgcctgcctactcag 47389119
Query: 1904 cgcagcccgccttgtgccttaggccccacccccagccaccagggagccaatctcagcctg 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47389118 cgcagcccgccttgtgccttaggccccacccccagccaccagggagccaatctcagcctg 47389059
Query: 1964 ccacgccaaggagccctgcccaccaaccaatcaatgttctgtctctgccctgatactgcc 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47389058 ccacgccaaggagccctgcccaccaaccaatcaatgttctgtctctgccctgatactgcc 47388999
Query: 2024 tcaggatcccccatccccgccctgggagatgagggggtccccatgtacttttccagttcc 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47388998 tcaggatcccccatccccgccctgggagatgagggggtccccatgtacttttccagttcc 47388939
Query: 2084 tctggaattgggggaccccccaaagactgggacccctgcctcctccataattgggtttgt 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47388938 tctggaattgggggaccccccaaagactgggacccctgcctcctccataattgggtttgt 47388879
Query: 2144 tcttggctttggggatacttataaattcaggggctcctccatctccaatggctgggattt 2203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47388878 tcttggctttggggatacttataaattcaggggctcctccatctccaatggctgggattt 47388819
Query: 2204 gtggcagggattccactccgagcctctctggaatttgtgcctgatgtgccttccactgga 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47388818 gtggcagggattccactccgagcctctctggaatttgtgcctgatgtgccttccactgga 47388759
Query: 2264 ttttggggtccccagcaccccgtgtggatttnnnnnnntcccctctgtctctccctcacc 2323
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 47388758 ttttggggtccccagcaccccgtgtggatttgggggggtcccctctgtctctccctcacc 47388699
Query: 2324 attcaaggactcccctgtttcttcaccaagaagcacagaattctgctgggcctttgctt 2382
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47388698 attcaaggactcccctgtttcttcaccaagaagcacagaattctgctgggcctttgctt 47388640
Score = 406 bits (205), Expect = e-110
Identities = 205/205 (100%)
Strand = Plus / Minus
Query: 977 gaagaatctggggtaccgggactcgggctattactgggaggtgccccccagtgaggtgca 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47394696 gaagaatctggggtaccgggactcgggctattactgggaggtgccccccagtgaggtgca 47394637
Query: 1037 gctgctgaagaggatcgggacgggctcgtttggcaccgtgtttcgcgggcggtggcatgg 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47394636 gctgctgaagaggatcgggacgggctcgtttggcaccgtgtttcgcgggcggtggcatgg 47394577
Query: 1097 cgatgtggccgtgaaggtgctcaaggtggcccagcccacagccgagcaggcccaggcctt 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47394576 cgatgtggccgtgaaggtgctcaaggtggcccagcccacagccgagcaggcccaggcctt 47394517
Query: 1157 caagaacgagatgcaagtgctcagg 1181
|||||||||||||||||||||||||
Sbjct: 47394516 caagaacgagatgcaagtgctcagg 47394492
Score = 357 bits (180), Expect = 2e-95
Identities = 180/180 (100%)
Strand = Plus / Minus
Query: 1178 caggaagacgcggcacgtcaacatcttgctgttcatgggcttcatgacccggcccggctt 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47391908 caggaagacgcggcacgtcaacatcttgctgttcatgggcttcatgacccggcccggctt 47391849
Query: 1238 tgccatcatcacacagtggtgcgagggctccagtctgtaccaccacctgcacgtggccga 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47391848 tgccatcatcacacagtggtgcgagggctccagtctgtaccaccacctgcacgtggccga 47391789
Query: 1298 cacacgcttcgacatggtccagctcatcgatgtggcccggcagactgcccagggcatgga 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47391788 cacacgcttcgacatggtccagctcatcgatgtggcccggcagactgcccagggcatgga 47391729
Score = 321 bits (162), Expect = 1e-84
Identities = 162/162 (100%)
Strand = Plus / Minus
Query: 43 caggagccccatggcacctgcccagccccacctgagcccgtcttgacaaagtcctaggct 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47399356 caggagccccatggcacctgcccagccccacctgagcccgtcttgacaaagtcctaggct 47399297
Query: 103 ccatggagccaccacggggcccccctgccaacggggccgagccgtcccgggcagtgggca 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47399296 ccatggagccaccacggggcccccctgccaacggggccgagccgtcccgggcagtgggca 47399237
Query: 163 ccgtcaaagtgtacctgcccaacaagcagcgcacggtggtga 204
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47399236 ccgtcaaagtgtacctgcccaacaagcagcgcacggtggtga 47399195
Score = 311 bits (157), Expect = 1e-81
Identities = 157/157 (100%)
Strand = Plus / Minus
Query: 408 gtacggaagacattcttcagcctggccttttgtgacttctgccttaagtttctgttccat 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47397539 gtacggaagacattcttcagcctggccttttgtgacttctgccttaagtttctgttccat 47397480
Query: 468 ggcttccgctgccaaacctgtggatacaagttccaccagcattgttcctccaaggtcccc 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47397479 ggcttccgctgccaaacctgtggatacaagttccaccagcattgttcctccaaggtcccc 47397420
Query: 528 acagtttgtgtcgacatgagtaccaatcgccgacagt 564
|||||||||||||||||||||||||||||||||||||
Sbjct: 47397419 acagtttgtgtcgacatgagtaccaatcgccgacagt 47397383
Score = 291 bits (147), Expect = 9e-76
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 831 gctgctggtaatagaggtggtggcgacggagccccccgggggagccccagcccagccagc 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47394937 gctgctggtaatagaggtggtggcgacggagccccccgggggagccccagcccagccagc 47394878
Query: 891 gtgtcctcggggaggaagtccccacattccaagtcgccatctgagcagcgggagcggaag 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47394877 gtgtcctcggggaggaagtccccacattccaagtcgccatctgagcagcgggagcggaag 47394818
Query: 951 tccttggccgacgacaagaagaaagtg 977
|||||||||||||||||||||||||||
Sbjct: 47394817 tccttggccgacgacaagaagaaagtg 47394791
Score = 289 bits (146), Expect = 4e-75
Identities = 146/146 (100%)
Strand = Plus / Minus
Query: 658 ccagctcctgcacccagcaccgcgaccctgagcacttccccttccctgccccggccaatg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47395318 ccagctcctgcacccagcaccgcgaccctgagcacttccccttccctgccccggccaatg 47395259
Query: 718 cccccctgcagcgcatccgctccacgtccacccccaacgtccacatggtcagcaccaccg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47395258 cccccctgcagcgcatccgctccacgtccacccccaacgtccacatggtcagcaccaccg 47395199
Query: 778 cccccatggactccggcctggtccag 803
||||||||||||||||||||||||||
Sbjct: 47395198 cccccatggactccggcctggtccag 47395173
Score = 276 bits (139), Expect = 5e-71
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 1652 ccagattatcttcatggtgggccgtggctatctgtccccggacctcagcaaaatctccag 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47389664 ccagattatcttcatggtgggccgtggctatctgtccccggacctcagcaaaatctccag 47389605
Query: 1712 caactgccccaaggccatgcggcgcctgctgtctgactgcctcaagttccagcgggagga 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47389604 caactgccccaaggccatgcggcgcctgctgtctgactgcctcaagttccagcgggagga 47389545
Query: 1772 gcgacccctcttcccccag 1790
|||||||||||||||||||
Sbjct: 47389544 gcgacccctcttcccccag 47389526
Score = 264 bits (133), Expect = 2e-67
Identities = 133/133 (100%)
Strand = Plus / Minus
Query: 1523 ggcggctgaggtgatccggatgcaggacccgaacccctacagcttccagtctgacgtcta 1582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47390699 ggcggctgaggtgatccggatgcaggacccgaacccctacagcttccagtctgacgtcta 47390640
Query: 1583 tgcctatggggtggtgctctacgagctcatgaccggctcgctgccttacagccacattgg 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47390639 tgcctatggggtggtgctctacgagctcatgaccggctcgctgccttacagccacattgg 47390580
Query: 1643 cagccgtgaccag 1655
|||||||||||||
Sbjct: 47390579 cagccgtgaccag 47390567
Score = 238 bits (120), Expect = 1e-59
Identities = 120/120 (100%)
Strand = Plus / Minus
Query: 1405 acatcttcctacacgagggcctcacggtgaagatcggggacttcggcctggccacagtga 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47391053 acatcttcctacacgagggcctcacggtgaagatcggggacttcggcctggccacagtga 47390994
Query: 1465 agacgcggtggagcggggcccagcccttggagcagccctcgggctccgtgctgtggatgg 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47390993 agacgcggtggagcggggcccagcccttggagcagccctcgggctccgtgctgtggatgg 47390934
Score = 210 bits (106), Expect = 3e-51
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 304 ggcgaaagacagtcaccgcctgggacacggccattgcccccctggacggcgaggagctca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47397733 ggcgaaagacagtcaccgcctgggacacggccattgcccccctggacggcgaggagctca 47397674
Query: 364 ttgtggaggtcctcgaagatgtccccctgaccatgcacaattttgt 409
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47397673 ttgtggaggtcctcgaagatgtccccctgaccatgcacaattttgt 47397628
Score = 210 bits (106), Expect = 3e-51
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 200 ggtgactgtccgggatggcatgagtgtctacgactctctggacaaggccctcaaggtgcg 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47399047 ggtgactgtccgggatggcatgagtgtctacgactctctggacaaggccctcaaggtgcg 47398988
Query: 260 aggtctcaatcaggattgctgcgtggtctaccggctcatcaagggg 305
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47398987 aggtctcaatcaggattgctgcgtggtctaccggctcatcaagggg 47398942
Score = 196 bits (99), Expect = 4e-47
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 563 gttctaccacagtgtccaggatttgtccggaggctccagacagcatgagactccctcgaa 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47397267 gttctaccacagtgtccaggatttgtccggaggctccagacagcatgagactccctcgaa 47397208
Query: 623 ccgccccctgaatgagccgctaacccctcagggtcccag 661
|||||||||||||||||||||||||||||||||||||||
Sbjct: 47397207 ccgccccctgaatgagccgctaacccctcagggtcccag 47397169
Score = 93.7 bits (47), Expect = 4e-16
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 1358 ctacctccatgccaagaacatcattcaccgagatctcaagtctaaca 1404
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47391625 ctacctccatgccaagaacatcattcaccgagatctcaagtctaaca 47391579
Score = 91.7 bits (46), Expect = 2e-15
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 1 gagaggcccaagatggaggcggcggcggctgtagcggcgtgacagg 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47400696 gagaggcccaagatggaggcggcggcggctgtagcggcgtgacagg 47400651
Score = 65.9 bits (33), Expect = 1e-07
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 799 tccagctcactgcccagagtttcaacactgatg 831
|||||||||||||||||||||||||||||||||
Sbjct: 47395070 tccagctcactgcccagagtttcaacactgatg 47395038
>Sscrofa_Chr13
|| Length = 218635234
Score = 60.0 bits (30), Expect = 6e-06
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 1530 gaggtgatccggatgcaggacccgaacccctacagcttccagtctgacgtctatgcctat 1589
|||||||||||||||||||| ||||| | |||||||||||| |||||||| ||||
Sbjct: 75875463 gaggtgatccggatgcaggataacaacccattcagcttccagtccgacgtctactcctac 75875404
Query: 1590 ggggtggtgctctacgagctcatgac 1615
|| | ||||| ||||||||||||||
Sbjct: 75875403 ggcattgtgctgtacgagctcatgac 75875378
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 58,159,614
Number of extensions: 366
Number of successful extensions: 366
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 364
Number of HSP's successfully gapped: 17
Length of query: 2404
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2382
Effective length of database: 2,808,408,574
Effective search space: 6689629223268
Effective search space used: 6689629223268
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)