Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008320
(932 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002694855.1| PREDICTED: carboxylesterase 2-like [Bos taur... 459 e-129
Alignment gi|XP_590749.3| PREDICTED: carboxylesterase 2-like [Bos taurus]. 459 e-129
Alignment gi|NP_001029432.1| carboxylesterase 2 [Bos taurus]. 274 9e-74
Alignment gi|NP_001179288.1| carboxylesterase 5A [Bos taurus]. 260 1e-69
Alignment gi|XP_002694929.1| PREDICTED: carboxylesterase 7 [Bos taurus]. 260 1e-69
Alignment gi|NP_001069022.1| carboxylesterase 1 [Bos taurus]. 256 2e-68
Alignment gi|NP_001012287.1| retinyl ester hydrolase type 1 [Bos taurus]. 256 3e-68
Alignment gi|NP_001039483.1| carboxylesterase 1 [Bos taurus]. 256 3e-68
Alignment gi|NP_001161306.1| carboxylesterase 4A [Bos taurus]. 233 2e-61
Alignment gi|XP_002700510.1| PREDICTED: neuroligin 4, Y-linked-like isofo... 212 3e-55
>ref|XP_002694855.1| PREDICTED: carboxylesterase 2-like [Bos taurus].
Length = 570
Score = 459 bits (1181), Expect = e-129
Identities = 228/294 (77%), Positives = 243/294 (82%)
Frame = +2
Query: 50 METVVRTASRXXXXXXXXXXXXXXXXTGREATQPEVDTTLXXXXXXXXXXKGTDRLVNVF 229
M TVVRT SR TG TQPEVDT L KGTD LVNVF
Sbjct: 1 MGTVVRTGSRALVGVACLLLAFSATDTGPGVTQPEVDTPLGRVRGRQVGVKGTDHLVNVF 60
Query: 230 LGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPV 409
LGIPFAQPPLGP RFSAPRPA+SWEGVRDAS A A+CPQD ERMNN+RF LDGKHQ FP+
Sbjct: 61 LGIPFAQPPLGPHRFSAPRPAESWEGVRDASRAHAVCPQDPERMNNSRFTLDGKHQTFPI 120
Query: 410 SEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRL 589
SEDCL+LNIYSPAEA +GAGRPVMVWFHGGSLV G ATSHDGSALAAYGDVVVVTVQYRL
Sbjct: 121 SEDCLILNIYSPAEAPSGAGRPVMVWFHGGSLVTGTATSHDGSALAAYGDVVVVTVQYRL 180
Query: 590 GLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVL 769
G LGFFSTGDKHAPGNWGFLD VAALRWVQ NI+PFGGDFNSVT+FG S+GAS+VSALVL
Sbjct: 181 GFLGFFSTGDKHAPGNWGFLDVVAALRWVQGNITPFGGDFNSVTIFGESSGASVVSALVL 240
Query: 770 SPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
SPLAAGLFHRAIA+SG+IT+PGLLD NPW LAQ+ ADSLAC S SSAEM+QCLR
Sbjct: 241 SPLAAGLFHRAIAQSGIITVPGLLDPNPWLLAQTLADSLACNSDSSAEMVQCLR 294
>ref|XP_590749.3| PREDICTED: carboxylesterase 2-like [Bos taurus].
Length = 570
Score = 459 bits (1181), Expect = e-129
Identities = 228/294 (77%), Positives = 243/294 (82%)
Frame = +2
Query: 50 METVVRTASRXXXXXXXXXXXXXXXXTGREATQPEVDTTLXXXXXXXXXXKGTDRLVNVF 229
M TVVRT SR TG TQPEVDT L KGTD LVNVF
Sbjct: 1 MGTVVRTGSRALVGVACLLLAFSATDTGPGVTQPEVDTPLGRVRGRQVGVKGTDHLVNVF 60
Query: 230 LGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPV 409
LGIPFAQPPLGP RFSAPRPA+SWEGVRDAS A A+CPQD ERMNN+RF LDGKHQ FP+
Sbjct: 61 LGIPFAQPPLGPHRFSAPRPAESWEGVRDASRAHAVCPQDPERMNNSRFTLDGKHQTFPI 120
Query: 410 SEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRL 589
SEDCL+LNIYSPAEA +GAGRPVMVWFHGGSLV G ATSHDGSALAAYGDVVVVTVQYRL
Sbjct: 121 SEDCLILNIYSPAEAPSGAGRPVMVWFHGGSLVTGTATSHDGSALAAYGDVVVVTVQYRL 180
Query: 590 GLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVL 769
G LGFFSTGDKHAPGNWGFLD VAALRWVQ NI+PFGGDFNSVT+FG S+GAS+VSALVL
Sbjct: 181 GFLGFFSTGDKHAPGNWGFLDVVAALRWVQGNITPFGGDFNSVTIFGESSGASVVSALVL 240
Query: 770 SPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
SPLAAGLFHRAIA+SG+IT+PGLLD NPW LAQ+ ADSLAC S SSAEM+QCLR
Sbjct: 241 SPLAAGLFHRAIAQSGIITVPGLLDPNPWLLAQTLADSLACNSDSSAEMVQCLR 294
>ref|NP_001029432.1| carboxylesterase 2 [Bos taurus].
Length = 553
Score = 274 bits (700), Expect = 9e-74
Identities = 140/267 (52%), Positives = 180/267 (67%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++T+P T D V+ FLGIPFA+PP+GP RF+ P P +SW GV
Sbjct: 26 GQDSTRPVRTTHTGKVQGSLVYVNNADVGVHTFLGIPFAKPPVGPLRFAPPEPPESWSGV 85
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVWF 490
+D ++ PA CPQD + M + + + +SEDCL LNI++PA + G+ PVMVW
Sbjct: 86 KDGTSQPAKCPQDADGMKSME-LWNVTLPSTSMSEDCLYLNIHTPAYSHEGSNLPVMVWI 144
Query: 491 HGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALR 670
HGG LV+G A+ +DGSALAA+GDVVVV +QYRLGLLGFFSTGDKHA GNWG+LD VAALR
Sbjct: 145 HGGGLVLGMASMYDGSALAAFGDVVVVVIQYRLGLLGFFSTGDKHATGNWGYLDQVAALR 204
Query: 671 WVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSN 850
WVQ+NI+ FGGD VT+FG SAG VS V+SP++ GLFH AI ESGV LPGL ++
Sbjct: 205 WVQQNIAYFGGDPGRVTIFGESAGGISVSLHVISPMSQGLFHGAIMESGVALLPGLTINS 264
Query: 851 PWPLAQSFADSLACPSTSSAEMLQCLR 931
+A+ A+ AC S ++ CLR
Sbjct: 265 SDKVAKVVANLSACGQVDSEALVDCLR 291
>ref|NP_001179288.1| carboxylesterase 5A [Bos taurus].
Length = 576
Score = 260 bits (664), Expect = 1e-69
Identities = 137/266 (51%), Positives = 172/266 (64%), Gaps = 2/266 (0%)
Frame = +2
Query: 140 ATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDA 319
A P T L G D LVNVFLG+P+A PP+GP RF+ P P W+G +A
Sbjct: 29 ADAPARHTNLGWVQGTQASVLGNDMLVNVFLGVPYAAPPVGPLRFAKPEPLLPWDGFLNA 88
Query: 320 STAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVWFHGG 499
++ P +C Q+ E + + +L + F VSEDCL LNIY+PA A TG+ PVMVW GG
Sbjct: 89 TSYPKLCFQNSEWLFTDQHILKVHYPKFRVSEDCLYLNIYAPAHAETGSKLPVMVWLPGG 148
Query: 500 SLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQ 679
+ G+A+ DGSALA+Y DV+VVT+QYRLG+ GFF+TGD+HA GNW F+D VAAL WVQ
Sbjct: 149 AFETGSASIFDGSALASYEDVLVVTIQYRLGIFGFFNTGDEHARGNWAFMDQVAALIWVQ 208
Query: 680 ENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLL--DSNP 853
ENI FGGD VT+FG SAGA VS+L+LSP+ GLFHRAI ESGV +P L D
Sbjct: 209 ENIEFFGGDPRCVTIFGESAGAISVSSLILSPMTKGLFHRAIMESGVAIIPYLKAPDYER 268
Query: 854 WPLAQSFADSLACPSTSSAEMLQCLR 931
Q+ A C ++ S +LQCLR
Sbjct: 269 NDDLQTIASICDCSASDSIALLQCLR 294
>ref|XP_002694929.1| PREDICTED: carboxylesterase 7 [Bos taurus].
Length = 576
Score = 260 bits (664), Expect = 1e-69
Identities = 137/266 (51%), Positives = 172/266 (64%), Gaps = 2/266 (0%)
Frame = +2
Query: 140 ATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDA 319
A P T L G D LVNVFLG+P+A PP+GP RF+ P P W+G +A
Sbjct: 29 ADAPARHTNLGWVQGTQASVLGNDMLVNVFLGVPYAAPPVGPLRFAKPEPLLPWDGFLNA 88
Query: 320 STAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVWFHGG 499
++ P +C Q+ E + + +L + F VSEDCL LNIY+PA A TG+ PVMVW GG
Sbjct: 89 TSYPKLCFQNSEWLFTDQHILKVHYPKFRVSEDCLYLNIYAPAHAETGSKLPVMVWLPGG 148
Query: 500 SLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQ 679
+ G+A+ DGSALA+Y DV+VVT+QYRLG+ GFF+TGD+HA GNW F+D VAAL WVQ
Sbjct: 149 AFETGSASIFDGSALASYEDVLVVTIQYRLGIFGFFNTGDEHARGNWAFMDQVAALIWVQ 208
Query: 680 ENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLL--DSNP 853
ENI FGGD VT+FG SAGA VS+L+LSP+ GLFHRAI ESGV +P L D
Sbjct: 209 ENIEFFGGDPRCVTIFGESAGAISVSSLILSPMTKGLFHRAIMESGVAIIPYLKAPDYER 268
Query: 854 WPLAQSFADSLACPSTSSAEMLQCLR 931
Q+ A C ++ S +LQCLR
Sbjct: 269 NDDLQTIASICDCSASDSIALLQCLR 294
>ref|NP_001069022.1| carboxylesterase 1 [Bos taurus].
Length = 558
Score = 256 bits (654), Expect = 2e-68
Identities = 136/269 (50%), Positives = 176/269 (65%), Gaps = 2/269 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G + P VDT KG + V VFLG+PFA+PPLG RF+ P+PA+ W V
Sbjct: 18 GLAPSPPIVDTAQGRVLGKHVSLKGFAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWTFV 77
Query: 311 RDASTAPAMCPQDL--ERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMV 484
++ + P MC QD ++ + F ++ SEDCL LNIY+PA+ T + PVMV
Sbjct: 78 KNTISYPPMCSQDPVGAQLLSDLFTNRKENISLTFSEDCLYLNIYTPADLTKRSRLPVMV 137
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG L+VG A+++DG L+A+ +VVVVT+QYRLG+ GFFSTGD+H+ GNWG LD VAA
Sbjct: 138 WIHGGGLMVGGASTYDGLVLSAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAA 197
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLD 844
L WVQENI+ FGGD SVT+FG SAGA VS LVLSPLA LFHRAI+ESGV + L+
Sbjct: 198 LHWVQENIANFGGDPGSVTIFGESAGAESVSILVLSPLARNLFHRAISESGVALISTLVK 257
Query: 845 SNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ A+ A C +T+SA ++ CLR
Sbjct: 258 RDSKAAAEQIAVIAGCKTTTSAVLVHCLR 286
>ref|NP_001012287.1| retinyl ester hydrolase type 1 [Bos taurus].
Length = 565
Score = 256 bits (653), Expect = 3e-68
Identities = 136/269 (50%), Positives = 176/269 (65%), Gaps = 2/269 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G + P VDT KG + V VFLGIPFA+PPLG RF+ P+PA+ W V
Sbjct: 18 GLPPSPPIVDTAQGRVLGKYVSLKGFAQPVGVFLGIPFAKPPLGSLRFAPPQPAEPWTFV 77
Query: 311 RDASTAPAMCPQDLERMN-NARFVLDGKHQI-FPVSEDCLVLNIYSPAEATTGAGRPVMV 484
++ ++ MC Q+ + + + +G + SEDCL LNIY+PA+ T + PVMV
Sbjct: 78 KNTTSYSPMCSQNAVLVEMTSDLISNGMETVKTKFSEDCLYLNIYTPADLTKRSRLPVMV 137
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG+L+ G A+S DG L+A+ +VVVVT+QYRLG+ GFFSTGD+H+ GNWG LD VAA
Sbjct: 138 WIHGGALLTGGASSCDGLVLSAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAA 197
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLD 844
L WVQENI+ FGGD SVT+FG SAGA VS LVLSPLA LFHRAI+ESGV +PGL+
Sbjct: 198 LHWVQENIANFGGDPGSVTIFGGSAGAESVSVLVLSPLAKNLFHRAISESGVALIPGLVK 257
Query: 845 SNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ A+ A C + +SA ++ CLR
Sbjct: 258 KDSKAEAKRIAAFAGCKTITSAVLVHCLR 286
>ref|NP_001039483.1| carboxylesterase 1 [Bos taurus].
Length = 566
Score = 256 bits (653), Expect = 3e-68
Identities = 137/269 (50%), Positives = 175/269 (65%), Gaps = 2/269 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+ + P VDT KG + V VFLG+PFA+PPLG RF+ P+PA+ W V
Sbjct: 19 GQPPSSPVVDTAQGRVLGKHVSLKGFAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWTFV 78
Query: 311 RDASTAPAMCPQDL--ERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMV 484
++ + P MC QD ++ + F ++ SEDCL LNIY+PA+ T + PVMV
Sbjct: 79 KNTISHPPMCSQDPVGAQLFSDLFTNRKENISLTFSEDCLYLNIYTPADLTKRSRLPVMV 138
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG LVVG A+++DG AL+A +VVVVT+QYRLG+ GFFSTGD+H+ GNWG LD VAA
Sbjct: 139 WIHGGGLVVGGASTYDGLALSARENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAA 198
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLD 844
L WVQENI+ FGGD SVT+FG SAGA VS LVLSPLA LFHRAI+ESGV L+
Sbjct: 199 LHWVQENIANFGGDPGSVTIFGESAGAESVSILVLSPLARNLFHRAISESGVALTSTLVK 258
Query: 845 SNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ A+ A C + +SA ++ CLR
Sbjct: 259 RDSKVAAEQIAAFAGCKTITSAVLVHCLR 287
>ref|NP_001161306.1| carboxylesterase 4A [Bos taurus].
Length = 550
Score = 233 bits (593), Expect = 2e-61
Identities = 113/239 (47%), Positives = 159/239 (66%), Gaps = 1/239 (0%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDL-ERMNNARFVLDGKH 394
+NVFLG+PF++PP+G RF+AP P + WEG+RDA+T +C Q+ ++ + F ++
Sbjct: 48 INVFLGVPFSKPPVGAHRFAAPEPPEPWEGIRDATTYAPVCLQESWGQVTSMYFNTHKRY 107
Query: 395 QIFPVSEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVT 574
+ SEDCL LN+++P A +PVM+WF GG+ +VG+A+++DGS LAA VVVV
Sbjct: 108 KWLHFSEDCLYLNVHAPVRARGDPLQPVMIWFPGGAFLVGSASTYDGSELAAREKVVVVV 167
Query: 575 VQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIV 754
+Q+RLG+LGF STGD A GNW LD +AALRWVQ+NI FGGD VT+FG S+GA +
Sbjct: 168 LQHRLGILGFLSTGDSQARGNWALLDQIAALRWVQKNIEAFGGDPGCVTLFGQSSGAMCI 227
Query: 755 SALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
S L+ S LA GLFHRAI++SG + +P +A+ A C S+ ++ CLR
Sbjct: 228 SGLMTSSLARGLFHRAISQSGTAVFQNFITPDPLKVAKKIAQLAGCNHNSTKILVDCLR 286
>ref|XP_002700510.1| PREDICTED: neuroligin 4, Y-linked-like isoform 2 [Bos taurus].
Length = 815
Score = 212 bits (540), Expect = 3e-55
Identities = 113/257 (43%), Positives = 151/257 (58%), Gaps = 19/257 (7%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQ 397
V +LG+P+A PP G RF P P SW GVR+A+ A+CPQ L+ R +L H
Sbjct: 70 VEQYLGVPYASPPTGERRFQPPEPPSSWTGVRNATQFAAVCPQHLDE----RSLL---HD 122
Query: 398 IFPV----------------SEDCLVLNIYSPAEATT---GAGRPVMVWFHGGSLVVGAA 520
+ PV +EDCL LNIY P E + +PVMV+ HGGS + G
Sbjct: 123 MLPVWFTANLDTLMTYMQDQNEDCLYLNIYVPTEDDIHDQNSKKPVMVYIHGGSYMEGTG 182
Query: 521 TSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFG 700
DGS LA+YG+V+V+T+ YRLG+LGF STGD+ A GN+G LD + ALRW++EN+ FG
Sbjct: 183 NMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFG 242
Query: 701 GDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFAD 880
GD VT+FGS AGAS VS L LS + GLF +AI +SG ++ P + AD
Sbjct: 243 GDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAIIQSGTALSSWAVNYQPAKYTRILAD 302
Query: 881 SLACPSTSSAEMLQCLR 931
+ C + +M++CLR
Sbjct: 303 KVGCNMLDTTDMVECLR 319
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 40,919,118
Number of extensions: 1334471
Number of successful extensions: 7667
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 7363
Number of HSP's successfully gapped: 21
Length of query: 310
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 208
Effective length of database: 14,306,398
Effective search space: 2975730784
Effective search space used: 2975730784
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008320
(932 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_546889.2| PREDICTED: similar to carboxylesterase 2 isofor... 267 9e-72
Alignment gi|XP_864764.1| PREDICTED: similar to carboxylesterase 2 isofor... 267 9e-72
Alignment gi|XP_864741.1| PREDICTED: similar to carboxylesterase 2 isofor... 267 9e-72
Alignment gi|NP_001003969.1| carboxylesterase 5A precursor [Canis lupus f... 263 1e-70
Alignment gi|XP_864723.1| PREDICTED: similar to carboxylesterase 2 isofor... 261 9e-70
Alignment gi|NP_001003085.1| liver carboxylesterase 1 [Canis lupus famili... 260 1e-69
Alignment gi|XP_848357.1| PREDICTED: similar to X-linked neuroligin 4 iso... 212 4e-55
Alignment gi|XP_859030.1| PREDICTED: similar to neuroligin 2 isoform 8 [C... 206 3e-53
Alignment gi|XP_855883.1| PREDICTED: similar to X-linked neuroligin 4 iso... 205 4e-53
Alignment gi|XP_858950.1| PREDICTED: similar to neuroligin 2 isoform 7 [C... 205 4e-53
>ref|XP_546889.2| PREDICTED: similar to carboxylesterase 2 isoform 1 isoform 1 [Canis
familiaris].
Length = 559
Score = 267 bits (683), Expect = 9e-72
Identities = 136/268 (50%), Positives = 177/268 (66%), Gaps = 1/268 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++ P T +GTD V+ FLGIPFA+PPLGP RF+ P P + W GV
Sbjct: 26 GQDSASPIRTTHTGQVRGSLVHVEGTDVGVHTFLGIPFAKPPLGPLRFAPPEPPEPWSGV 85
Query: 311 RDASTAPAMCPQDLERMNNARF-VLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
+D ++ PAMC Q++ N +L+ + +SEDCL L+IY+PA A+ G+ PV VW
Sbjct: 86 KDGTSHPAMCVQNITTANAVALKLLNMTLPLTSMSEDCLYLSIYTPAHASEGSNLPVSVW 145
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSL++G A+ +DGSAL A+ D+VVV +QYRLG+LGFFSTGDKHA GNWG+LD VAAL
Sbjct: 146 IHGGSLMIGMASMYDGSALVAFEDLVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQVAAL 205
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RW+Q+NI+ FGGD VT+FG SAG VS V+SP++ GLFHRAI ESGV LPGL S
Sbjct: 206 RWIQQNIAYFGGDPGCVTIFGGSAGGISVSLHVVSPMSQGLFHRAIMESGVALLPGLTVS 265
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ + A C S ++ CLR
Sbjct: 266 SSDEVTTRVAKLSGCGQVDSEALVGCLR 293
>ref|XP_864764.1| PREDICTED: similar to carboxylesterase 2 isoform 2 isoform 4 [Canis
familiaris].
Length = 545
Score = 267 bits (683), Expect = 9e-72
Identities = 136/268 (50%), Positives = 177/268 (66%), Gaps = 1/268 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++ P T +GTD V+ FLGIPFA+PPLGP RF+ P P + W GV
Sbjct: 26 GQDSASPIRTTHTGQVRGSLVHVEGTDVGVHTFLGIPFAKPPLGPLRFAPPEPPEPWSGV 85
Query: 311 RDASTAPAMCPQDLERMNNARF-VLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
+D ++ PAMC Q++ N +L+ + +SEDCL L+IY+PA A+ G+ PV VW
Sbjct: 86 KDGTSHPAMCVQNITTANAVALKLLNMTLPLTSMSEDCLYLSIYTPAHASEGSNLPVSVW 145
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSL++G A+ +DGSAL A+ D+VVV +QYRLG+LGFFSTGDKHA GNWG+LD VAAL
Sbjct: 146 IHGGSLMIGMASMYDGSALVAFEDLVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQVAAL 205
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RW+Q+NI+ FGGD VT+FG SAG VS V+SP++ GLFHRAI ESGV LPGL S
Sbjct: 206 RWIQQNIAYFGGDPGCVTIFGGSAGGISVSLHVVSPMSQGLFHRAIMESGVALLPGLTVS 265
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ + A C S ++ CLR
Sbjct: 266 SSDEVTTRVAKLSGCGQVDSEALVGCLR 293
>ref|XP_864741.1| PREDICTED: similar to carboxylesterase 2 isoform 1 isoform 3 [Canis
familiaris].
Length = 558
Score = 267 bits (683), Expect = 9e-72
Identities = 136/268 (50%), Positives = 177/268 (66%), Gaps = 1/268 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++ P T +GTD V+ FLGIPFA+PPLGP RF+ P P + W GV
Sbjct: 26 GQDSASPIRTTHTGQVRGSLVHVEGTDVGVHTFLGIPFAKPPLGPLRFAPPEPPEPWSGV 85
Query: 311 RDASTAPAMCPQDLERMNNARF-VLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
+D ++ PAMC Q++ N +L+ + +SEDCL L+IY+PA A+ G+ PV VW
Sbjct: 86 KDGTSHPAMCVQNITTANAVALKLLNMTLPLTSMSEDCLYLSIYTPAHASEGSNLPVSVW 145
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSL++G A+ +DGSAL A+ D+VVV +QYRLG+LGFFSTGDKHA GNWG+LD VAAL
Sbjct: 146 IHGGSLMIGMASMYDGSALVAFEDLVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQVAAL 205
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RW+Q+NI+ FGGD VT+FG SAG VS V+SP++ GLFHRAI ESGV LPGL S
Sbjct: 206 RWIQQNIAYFGGDPGCVTIFGGSAGGISVSLHVVSPMSQGLFHRAIMESGVALLPGLTVS 265
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ + A C S ++ CLR
Sbjct: 266 SSDEVTTRVAKLSGCGQVDSEALVGCLR 293
>ref|NP_001003969.1| carboxylesterase 5A precursor [Canis lupus familiaris].
Length = 575
Score = 263 bits (673), Expect = 1e-70
Identities = 143/269 (53%), Positives = 171/269 (63%), Gaps = 2/269 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G A P T L G+ VNVFLGIPFA PPLGP RF P+PA W
Sbjct: 25 GPAADAPVRSTRLGWVRGKQATVLGSTMPVNVFLGIPFAAPPLGPLRFKRPKPALLWNDS 84
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVWF 490
RDA++ P +C Q+ + + + L + VSEDCL LNIY+PA A TG+ PVMVWF
Sbjct: 85 RDATSYPKLCLQNSVWLLSDQHFLKVHYPNLEVSEDCLYLNIYAPAHANTGSKLPVMVWF 144
Query: 491 HGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALR 670
GG+ G+A+ DGSALAAY DV++VT QYRLG+ GFF TGD+HAPGNW FLD +AAL
Sbjct: 145 PGGAFETGSASIFDGSALAAYEDVLIVTTQYRLGIFGFFKTGDQHAPGNWAFLDQLAALT 204
Query: 671 WVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLL--D 844
WVQENI FGGD +SVT+FG SAGA VS LVLSP+A+GLFH+AI ESGV +P L D
Sbjct: 205 WVQENIEFFGGDPHSVTIFGESAGAISVSGLVLSPMASGLFHKAIMESGVAIIPFLRAPD 264
Query: 845 SNPWPLAQSFADSLACPSTSSAEMLQCLR 931
Q A C + S +LQCLR
Sbjct: 265 DERNEDLQVIARICGCNVSDSVALLQCLR 293
>ref|XP_864723.1| PREDICTED: similar to carboxylesterase 2 isoform 1 isoform 2 [Canis
familiaris].
Length = 568
Score = 261 bits (666), Expect = 9e-70
Identities = 137/277 (49%), Positives = 177/277 (63%), Gaps = 10/277 (3%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++ P T +GTD V+ FLGIPFA+PPLGP RF+ P P + W GV
Sbjct: 26 GQDSASPIRTTHTGQVRGSLVHVEGTDVGVHTFLGIPFAKPPLGPLRFAPPEPPEPWSGV 85
Query: 311 RDASTAPAMCPQDLERMNNARF-VLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
+D ++ PAMC Q++ N +L+ + +SEDCL L+IY+PA A+ G+ PV VW
Sbjct: 86 KDGTSHPAMCVQNITTANAVALKLLNMTLPLTSMSEDCLYLSIYTPAHASEGSNLPVSVW 145
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSL++G A+ +DGSAL A+ D+VVV +QYRLG+LGFFSTGDKHA GNWG+LD VAAL
Sbjct: 146 IHGGSLMIGMASMYDGSALVAFEDLVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQVAAL 205
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RW+Q+NI+ FGGD VT+FG SAG VS V+SP++ GLFHRAI ESGV LPGL S
Sbjct: 206 RWIQQNIAYFGGDPGCVTIFGGSAGGISVSLHVVSPMSQGLFHRAIMESGVALLPGLTVS 265
Query: 848 N---------PWPLAQSFADSLACPSTSSAEMLQCLR 931
+ P A C S ++ CLR
Sbjct: 266 SSDEVTTVSIPSCEKPEVAKLSGCGQVDSEALVGCLR 302
>ref|NP_001003085.1| liver carboxylesterase 1 [Canis lupus familiaris].
Length = 565
Score = 260 bits (665), Expect = 1e-69
Identities = 137/269 (50%), Positives = 174/269 (64%), Gaps = 2/269 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G + P VDT +G + V VFLG+PFA+PPLGP RF+ P+ A+ W V
Sbjct: 18 GYPSLPPVVDTVQGKVLGKYVSLEGFAQPVAVFLGVPFAKPPLGPLRFAPPQAAEPWNFV 77
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPV--SEDCLVLNIYSPAEATTGAGRPVMV 484
++ ++ P MC QD + + P+ SEDCL LNIY+PA+ T + PVMV
Sbjct: 78 KNTTSYPPMCSQDAVGGQVLSELFTNRKDNIPLKFSEDCLYLNIYTPADLTKNSRLPVMV 137
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG LVVG A+++DG AL+A+ +VVVVT+QYRLG+ GFFSTGD+H GNWG LD +AA
Sbjct: 138 WIHGGGLVVGGASTYDGLALSAHENVVVVTIQYRLGIWGFFSTGDEHGRGNWGHLDQLAA 197
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLD 844
LRWVQENI+ FGG+ SVT+FG SAG VS LVLSPLA LFHRAI+ESGV L+
Sbjct: 198 LRWVQENIANFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALTAALVK 257
Query: 845 SNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ AQ A C ST+SA ++ CLR
Sbjct: 258 KDMKDTAQQIAVFAGCKSTTSAVLVHCLR 286
>ref|XP_848357.1| PREDICTED: similar to X-linked neuroligin 4 isoform 1 [Canis
familiaris].
Length = 816
Score = 212 bits (540), Expect = 4e-55
Identities = 112/257 (43%), Positives = 151/257 (58%), Gaps = 19/257 (7%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQ 397
V +LG+P+A PP G RF P P SW GVR+A+ A+CPQ L+ R +L H
Sbjct: 70 VEQYLGVPYASPPTGERRFQPPEPPSSWTGVRNATQFAAVCPQHLDE----RSLL---HD 122
Query: 398 IFPV----------------SEDCLVLNIYSPAEATT---GAGRPVMVWFHGGSLVVGAA 520
+ P+ +EDCL LNIY P E + +PVMV+ HGGS + G
Sbjct: 123 MLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDDIHDQNSKKPVMVYIHGGSYMEGTG 182
Query: 521 TSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFG 700
DGS LA+YG+V+V+T+ YRLG+LGF STGD+ A GN+G LD + ALRW++EN+ FG
Sbjct: 183 NMIDGSVLASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFG 242
Query: 701 GDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFAD 880
GD VT+FGS AGAS VS L LS + GLF +AI +SG ++ P + AD
Sbjct: 243 GDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAIIQSGTALSSWAVNYQPAKYTRILAD 302
Query: 881 SLACPSTSSAEMLQCLR 931
+ C + +M++CLR
Sbjct: 303 KVGCNMLDTTDMVECLR 319
>ref|XP_859030.1| PREDICTED: similar to neuroligin 2 isoform 8 [Canis familiaris].
Length = 818
Score = 206 bits (524), Expect = 3e-53
Identities = 110/245 (44%), Positives = 144/245 (58%), Gaps = 10/245 (4%)
Frame = +2
Query: 227 FLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVL-------- 382
FLG+P+A PPLG RF P SW GVR+A+T P CPQ+L A +
Sbjct: 69 FLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQNLHGALPAIMLPVWFTDNLE 128
Query: 383 DGKHQIFPVSEDCLVLNIYSPAE--ATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYG 556
+ SEDCL LN+Y P E +PVM++ HGGS + G DGS LAAYG
Sbjct: 129 AAATYVQNQSEDCLYLNLYVPTEDDIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYG 188
Query: 557 DVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSS 736
+V+V T+ YRLG+LGF STGD+ A GN+G LD + ALRW+ ENI+ FGGD +T+FGS
Sbjct: 189 NVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPERITIFGSG 248
Query: 737 AGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEM 916
AGAS V+ L+LS + GLF +AIA+SG ++ P + A + C S E
Sbjct: 249 AGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGCDREDSTEA 308
Query: 917 LQCLR 931
++CLR
Sbjct: 309 VECLR 313
>ref|XP_855883.1| PREDICTED: similar to X-linked neuroligin 4 isoform 3 [Canis
familiaris].
Length = 817
Score = 205 bits (522), Expect = 4e-53
Identities = 114/277 (41%), Positives = 153/277 (55%), Gaps = 39/277 (14%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQ 397
V +LG+P+A PP G RF P P SW GVR+A+ A+CPQ L+ R +L H
Sbjct: 51 VEQYLGVPYASPPTGERRFQPPEPPSSWTGVRNATQFAAVCPQHLDE----RSLL---HD 103
Query: 398 IFPV----------------SEDCLVLNIYSPAE--ATT--------------------- 460
+ P+ +EDCL LNIY P E A T
Sbjct: 104 MLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDGANTKKHADDITSNDRGEDEDIHDQ 163
Query: 461 GAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNW 640
+ +PVMV+ HGGS + G DGS LA+YG+V+V+T+ YRLG+LGF STGD+ A GN+
Sbjct: 164 NSKKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITINYRLGILGFLSTGDQAAKGNY 223
Query: 641 GFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGV 820
G LD + ALRW++EN+ FGGD VT+FGS AGAS VS L LS + GLF +AI +SG
Sbjct: 224 GLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAIIQSGT 283
Query: 821 ITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
++ P + AD + C + +M++CLR
Sbjct: 284 ALSSWAVNYQPAKYTRILADKVGCNMLDTTDMVECLR 320
>ref|XP_858950.1| PREDICTED: similar to neuroligin 2 isoform 7 [Canis familiaris].
Length = 825
Score = 205 bits (522), Expect = 4e-53
Identities = 111/252 (44%), Positives = 145/252 (57%), Gaps = 17/252 (6%)
Frame = +2
Query: 227 FLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVL-------- 382
FLG+P+A PPLG RF P SW GVR+A+T P CPQ+L A +
Sbjct: 69 FLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQNLHGALPAIMLPVWFTDNLE 128
Query: 383 DGKHQIFPVSEDCLVLNIYSPAEATT---------GAGRPVMVWFHGGSLVVGAATSHDG 535
+ SEDCL LN+Y P E T +PVM++ HGGS + G DG
Sbjct: 129 AAATYVQNQSEDCLYLNLYVPTEDETFFSFLDIRDSGKKPVMLFLHGGSYMEGTGNMFDG 188
Query: 536 SALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNS 715
S LAAYG+V+V T+ YRLG+LGF STGD+ A GN+G LD + ALRW+ ENI+ FGGD
Sbjct: 189 SVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPER 248
Query: 716 VTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACP 895
+T+FGS AGAS V+ L+LS + GLF +AIA+SG ++ P + A + C
Sbjct: 249 ITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGCD 308
Query: 896 STSSAEMLQCLR 931
S E ++CLR
Sbjct: 309 REDSTEAVECLR 320
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 42,556,183
Number of extensions: 1370994
Number of successful extensions: 7629
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 7266
Number of HSP's successfully gapped: 37
Length of query: 310
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 207
Effective length of database: 15,440,896
Effective search space: 3196265472
Effective search space used: 3196265472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008320
(932 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230554.1| carboxylesterase 3 [Sus scrofa]. 530 e-151
Alignment gi|NP_999411.1| liver carboxylesterase [Sus scrofa]. 267 7e-72
Alignment gi|XP_003135217.1| PREDICTED: neuroligin-3 isoform 2 [Sus scrof... 204 6e-53
Alignment gi|XP_001927846.1| PREDICTED: neuroligin-3 isoform 1 [Sus scrof... 200 8e-52
Alignment gi|XP_003135218.1| PREDICTED: neuroligin-3 isoform 3 [Sus scrof... 189 1e-48
Alignment gi|XP_003354529.1| PREDICTED: acetylcholinesterase-like [Sus sc... 168 3e-42
Alignment gi|XP_003353742.1| PREDICTED: bile salt-activated lipase [Sus s... 164 5e-41
Alignment gi|XP_003360403.1| PREDICTED: neuroligin-3 [Sus scrofa]. 162 2e-40
Alignment gi|XP_003134964.2| PREDICTED: neuroligin-4, X-linked [Sus scrof... 157 1e-38
Alignment gi|XP_003358712.1| PREDICTED: cholinesterase-like [Sus scrofa]. 155 4e-38
>ref|NP_001230554.1| carboxylesterase 3 [Sus scrofa].
Length = 570
Score = 530 bits (1366), Expect = e-151
Identities = 268/294 (91%), Positives = 268/294 (91%)
Frame = +2
Query: 50 METVVRTASRXXXXXXXXXXXXXXXXTGREATQPEVDTTLXXXXXXXXXXKGTDRLVNVF 229
METVVRTASR TGREATQPEVDTTL KGTDRLVNVF
Sbjct: 1 METVVRTASRLLVWVACVLVALSAAVTGREATQPEVDTTLGRVRGRQVGVKGTDRLVNVF 60
Query: 230 LGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPV 409
LGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPV
Sbjct: 61 LGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPV 120
Query: 410 SEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRL 589
SEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRL
Sbjct: 121 SEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRL 180
Query: 590 GLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVL 769
GLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVL
Sbjct: 181 GLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVL 240
Query: 770 SPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
SPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR
Sbjct: 241 SPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 294
>ref|NP_999411.1| liver carboxylesterase [Sus scrofa].
Length = 565
Score = 267 bits (682), Expect = 7e-72
Identities = 142/270 (52%), Positives = 180/270 (66%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+ A+ P VDT +G + V VFLG+PFA+PPLG RF+ P+PA+ W V
Sbjct: 18 GQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFV 77
Query: 311 RDASTAPAMCPQD--LERMNNARFVLDGKHQIFP-VSEDCLVLNIYSPAEATTGAGRPVM 481
++ ++ P MC QD +M + F +GK ++ P SEDCL LNIY+PA+ T PVM
Sbjct: 78 KNTTSYPPMCCQDPVAGQMTSDLFT-NGKERLIPEFSEDCLYLNIYTPADLTRRGRLPVM 136
Query: 482 VWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVA 661
VW HGG LVVG A+++DG ALAA+ +VVVV +QYRLG+ GFFSTGD+H+ GNWG LD VA
Sbjct: 137 VWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVA 196
Query: 662 ALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLL 841
AL WVQENI+ FGGD SVT+FG SAG VS LVLSPLA LFHRAI+ESGV GL+
Sbjct: 197 ALHWVQENIANFGGDTGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALTAGLV 256
Query: 842 DSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ A+ A C +T+SA + CLR
Sbjct: 257 RKDMKAAAKQIAVLAGCKTTTSAVFVHCLR 286
>ref|XP_003135217.1| PREDICTED: neuroligin-3 isoform 2 [Sus scrofa].
Length = 808
Score = 204 bits (519), Expect = 6e-53
Identities = 110/248 (44%), Positives = 147/248 (59%), Gaps = 10/248 (4%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDL-----ERMNNARFVL 382
V+ +LG+P+A PP+G RF P P SW G+R+A+ P +CPQ++ E M F
Sbjct: 66 VDQYLGVPYAAPPIGEKRFLPPEPPPSWSGIRNATHFPPVCPQNIHTAVPEVMLPVWFTA 125
Query: 383 D---GKHQIFPVSEDCLVLNIYSPAE--ATTGAGRPVMVWFHGGSLVVGAATSHDGSALA 547
+ I +EDCL LN+Y P E +PVMV+ HGGS + G DGS LA
Sbjct: 126 NLDIVATYIQEPNEDCLYLNVYVPTEDDIRDSGAKPVMVYIHGGSYMEGTGNMIDGSVLA 185
Query: 548 AYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVF 727
+YG+V+V+T+ YR+G+LGF STGD+ A GN+G LD + ALRWV ENI+ FGGD +TVF
Sbjct: 186 SYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPRRITVF 245
Query: 728 GSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSS 907
GS GAS VS L LS + GLF RAI +SG ++ P AD + C +
Sbjct: 246 GSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSLLADKVGCNVLDT 305
Query: 908 AEMLQCLR 931
+M+ CLR
Sbjct: 306 VDMVDCLR 313
>ref|XP_001927846.1| PREDICTED: neuroligin-3 isoform 1 [Sus scrofa].
Length = 828
Score = 200 bits (509), Expect = 8e-52
Identities = 112/268 (41%), Positives = 150/268 (55%), Gaps = 30/268 (11%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDL-----ERMNNARFVL 382
V+ +LG+P+A PP+G RF P P SW G+R+A+ P +CPQ++ E M F
Sbjct: 66 VDQYLGVPYAAPPIGEKRFLPPEPPPSWSGIRNATHFPPVCPQNIHTAVPEVMLPVWFTA 125
Query: 383 D---GKHQIFPVSEDCLVLNIYSPAEATTGA----------------------GRPVMVW 487
+ I +EDCL LN+Y P E +GA +PVMV+
Sbjct: 126 NLDIVATYIQEPNEDCLYLNVYVPTEDGSGAKKQGEDLADNDGDEDEDIRDSGAKPVMVY 185
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGS + G DGS LA+YG+V+V+T+ YR+G+LGF STGD+ A GN+G LD + AL
Sbjct: 186 IHGGSYMEGTGNMIDGSVLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQAL 245
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RWV ENI+ FGGD +TVFGS GAS VS L LS + GLF RAI +SG ++
Sbjct: 246 RWVSENIAFFGGDPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNY 305
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCLR 931
P AD + C + +M+ CLR
Sbjct: 306 QPVKYTSLLADKVGCNVLDTVDMVDCLR 333
>ref|XP_003135218.1| PREDICTED: neuroligin-3 isoform 3 [Sus scrofa].
Length = 848
Score = 189 bits (481), Expect = 1e-48
Identities = 112/288 (38%), Positives = 150/288 (52%), Gaps = 50/288 (17%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDL-----ERMNNARFVL 382
V+ +LG+P+A PP+G RF P P SW G+R+A+ P +CPQ++ E M F
Sbjct: 66 VDQYLGVPYAAPPIGEKRFLPPEPPPSWSGIRNATHFPPVCPQNIHTAVPEVMLPVWFTA 125
Query: 383 D---GKHQIFPVSEDCLVLNIYSPAEATT------------------GAG---------- 469
+ I +EDCL LN+Y P E G+G
Sbjct: 126 NLDIVATYIQEPNEDCLYLNVYVPTEDVKRISKECARKPNKKICRKGGSGAKKQGEDLAD 185
Query: 470 --------------RPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFF 607
+PVMV+ HGGS + G DGS LA+YG+V+V+T+ YR+G+LGF
Sbjct: 186 NDGDEDEDIRDSGAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLNYRVGVLGFL 245
Query: 608 STGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAG 787
STGD+ A GN+G LD + ALRWV ENI+ FGGD +TVFGS GAS VS L LS + G
Sbjct: 246 STGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPRRITVFGSGIGASCVSLLTLSHHSEG 305
Query: 788 LFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
LF RAI +SG ++ P AD + C + +M+ CLR
Sbjct: 306 LFQRAIIQSGSALSSWAVNYQPVKYTSLLADKVGCNVLDTVDMVDCLR 353
>ref|XP_003354529.1| PREDICTED: acetylcholinesterase-like [Sus scrofa].
Length = 613
Score = 168 bits (426), Expect = 3e-42
Identities = 102/257 (39%), Positives = 142/257 (55%), Gaps = 19/257 (7%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQ 397
V+ FLGIPFA+PP+GP RF P P + W GV DA+ ++C Q ++ + +G
Sbjct: 59 VSAFLGIPFAEPPVGPRRFLPPEPKRPWPGVLDATAFQSVCYQYVDTLYPG---FEGTEM 115
Query: 398 IFP---VSEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATS--HDGSALAAYGDV 562
P +SEDCL LN+++P PV+VW +GG GA++ +DG LA
Sbjct: 116 WNPNRELSEDCLYLNVWTPYPRPASP-TPVLVWIYGGGFYSGASSLDVYDGRFLAQVEGT 174
Query: 563 VVVTVQYRLGLLGFFST-GDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSA 739
V+V++ YR+G GF + G + APGN G LD AL+WVQEN++ FGGD SVT+FG SA
Sbjct: 175 VLVSMNYRVGAFGFLALPGSREAPGNVGLLDQRLALQWVQENVAAFGGDPMSVTLFGESA 234
Query: 740 GASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPL---------AQSFADSLAC 892
GA+ V +LSP + GLFHRA+ +SG + PW A A + C
Sbjct: 235 GAASVGMHLLSPPSRGLFHRAVLQSGA-------PNGPWATVGVGEARRRATLLARLVGC 287
Query: 893 P----STSSAEMLQCLR 931
P + E++ CLR
Sbjct: 288 PPGGAGGNDTELVACLR 304
>ref|XP_003353742.1| PREDICTED: bile salt-activated lipase [Sus scrofa].
Length = 632
Score = 164 bits (416), Expect = 5e-41
Identities = 94/247 (38%), Positives = 130/247 (52%), Gaps = 9/247 (3%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQ 397
V++F GIPFA P P+ W+G A C Q A D +
Sbjct: 47 VDIFKGIPFAAAPKA---LENPQRHPGWQGTLKAKDFKKRCLQ-------ATITQDSTYG 96
Query: 398 IFPVSEDCLVLNIYSP-AEATTGAGRPVMVWFHGGSLVVGAATS--------HDGSALAA 550
EDCL LNI+ P PVM+W +GG+ ++G+ +DG LA
Sbjct: 97 ----DEDCLYLNIWVPQGRKEVSRDLPVMIWIYGGAFLMGSGQGANFLSNYLYDGEELAT 152
Query: 551 YGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFG 730
G+V+VVT YR+G LGF STGD + PGN+G D A+ WV+ NI+ FGGD +++T+FG
Sbjct: 153 RGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDPDNITIFG 212
Query: 731 SSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSA 910
SAG + VS LSP GL RAI++SGV P + NP A++ A+ + CP +A
Sbjct: 213 ESAGGASVSLQTLSPYNKGLIKRAISQSGVALSPWAIQKNPLSWAKTIAEKVGCPMDDTA 272
Query: 911 EMLQCLR 931
M +CL+
Sbjct: 273 RMARCLK 279
>ref|XP_003360403.1| PREDICTED: neuroligin-3 [Sus scrofa].
Length = 711
Score = 162 bits (410), Expect = 2e-40
Identities = 87/196 (44%), Positives = 113/196 (57%), Gaps = 22/196 (11%)
Frame = +2
Query: 410 SEDCLVLNIYSPAEATTGA----------------------GRPVMVWFHGGSLVVGAAT 523
+EDCL LN+Y P E +GA +PVMV+ HGGS + G
Sbjct: 21 NEDCLYLNVYVPTEDGSGAKKQGEDLADNDGDEDEDIRDSGAKPVMVYIHGGSYMEGTGN 80
Query: 524 SHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGG 703
DGS LA+YG+V+V+T+ YR+G+LGF STGD+ A GN+G LD + ALRWV ENI+ FGG
Sbjct: 81 MIDGSVLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGG 140
Query: 704 DFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADS 883
D +TVFGS GAS VS L LS + GLF RAI +SG ++ P AD
Sbjct: 141 DPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSLLADK 200
Query: 884 LACPSTSSAEMLQCLR 931
+ C + +M+ CLR
Sbjct: 201 VGCNVLDTVDMVDCLR 216
>ref|XP_003134964.2| PREDICTED: neuroligin-4, X-linked [Sus scrofa].
Length = 682
Score = 157 bits (396), Expect = 1e-38
Identities = 75/154 (48%), Positives = 101/154 (65%)
Frame = +2
Query: 470 RPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFL 649
+PVMV+ HGGS + G DGS LA+YG+V+V+T+ YRLG+LGF STGD+ A GN+G L
Sbjct: 32 KPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLL 91
Query: 650 DAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITL 829
D + ALRW++EN+ FGGD VT+FGS AGAS VS L LS + GLF +AI +SG
Sbjct: 92 DQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAIIQSGTALS 151
Query: 830 PGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
++ P + AD + C + +M+ CLR
Sbjct: 152 SWAVNYQPAKYTRILADRVGCNMLDTTDMVDCLR 185
>ref|XP_003358712.1| PREDICTED: cholinesterase-like [Sus scrofa].
Length = 602
Score = 155 bits (391), Expect = 4e-38
Identities = 94/243 (38%), Positives = 133/243 (54%), Gaps = 5/243 (2%)
Frame = +2
Query: 218 VNVFLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQ 397
V FLGIP+AQPPLG RF P+ W + +A+ C Q+ ++ + +
Sbjct: 53 VTAFLGIPYAQPPLGRLRFKKPQSMTKWPDIWNATKYANSCYQNTDQSFPGFVGSEMWNP 112
Query: 398 IFPVSEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSH--DGSALAAYGDVVVV 571
+SEDCL LN++ PA A VM+W +GG G ++ H DG L+ V+VV
Sbjct: 113 NTELSEDCLYLNVWIPAPKPKNA--TVMIWIYGGGFQTGTSSLHVYDGKFLSRVERVIVV 170
Query: 572 TVQYRLGLLGFFST-GDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGAS 748
++ YR+G LGF + G+ APGN G D AL+WVQ+NI+ FGG+ SVT+FG SAGA
Sbjct: 171 SMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAV 230
Query: 749 IVSALVLSPLAAGLFHRAIAESGVITLPGLLDS--NPWPLAQSFADSLACPSTSSAEMLQ 922
VS +LSP + LF RAI +SG P + S + A + C + E+++
Sbjct: 231 SVSLHLLSPRSHPLFARAILQSGSSNAPWAVTSLYEARNRTLTLAKFIGCSRENETEIIK 290
Query: 923 CLR 931
CLR
Sbjct: 291 CLR 293
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,477,691
Number of extensions: 866844
Number of successful extensions: 5143
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 4930
Number of HSP's successfully gapped: 19
Length of query: 310
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 211
Effective length of database: 8,879,129
Effective search space: 1873496219
Effective search space used: 1873496219
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008320
(932 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001158153.1| liver carboxylesterase 31 isoform 2 precurso... 371 e-103
Alignment gi|NP_941074.1| liver carboxylesterase 31 isoform 1 precursor [... 371 e-103
Alignment gi|NP_001152887.1| liver carboxylesterase 31-like isoform 2 [Mu... 366 e-101
Alignment gi|NP_653094.2| liver carboxylesterase 31-like isoform 1 [Mus m... 366 e-101
Alignment gi|NP_598421.1| liver carboxylesterase 22 precursor [Mus muscul... 265 3e-71
Alignment gi|NP_659179.1| liver carboxylesterase B-1 [Mus musculus]. 265 4e-71
Alignment gi|XP_003085419.1| PREDICTED: carboxylesterase 2 [Mus musculus]. 264 6e-71
Alignment gi|XP_488149.1| PREDICTED: carboxylesterase 2 isoform 1 [Mus mu... 264 6e-71
Alignment gi|XP_003086744.1| PREDICTED: carboxylesterase 2 [Mus musculus]. 264 6e-71
Alignment gi|XP_920139.1| PREDICTED: carboxylesterase 2 isoform 3 [Mus mu... 264 6e-71
>ref|NP_001158153.1| liver carboxylesterase 31 isoform 2 precursor [Mus musculus].
Length = 524
Score = 371 bits (953), Expect = e-103
Identities = 188/294 (63%), Positives = 217/294 (73%)
Frame = +2
Query: 47 SMETVVRTASRXXXXXXXXXXXXXXXXTGREATQPEVDTTLXXXXXXXXXXKGTDRLVNV 226
+MET + S G + TQPEVDT L K TDR+VNV
Sbjct: 3 NMETTAQAGSSVRVWMACLLLIFPTTVIGPKVTQPEVDTPLGRVRGRQVGVKDTDRMVNV 62
Query: 227 FLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFP 406
FLGIPFAQ PLGP RFSAP P Q WEGVRDAS P MC QD+ERM+N+RF L+ K +IFP
Sbjct: 63 FLGIPFAQAPLGPLRFSAPLPPQPWEGVRDASINPPMCLQDVERMSNSRFTLNEKMKIFP 122
Query: 407 VSEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYR 586
+SEDCL LNIYSP E T G RPVMVW HGGSL+VG++TSHDGSALAAYGDVVVVTVQYR
Sbjct: 123 ISEDCLTLNIYSPTEITAGDKRPVMVWIHGGSLLVGSSTSHDGSALAAYGDVVVVTVQYR 182
Query: 587 LGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALV 766
LG+ GF STGDKH PGN GFLD VAALRWVQ NI+PFGGD N VT+FG+SAG IVS+L+
Sbjct: 183 LGIFGFLSTGDKHMPGNRGFLDVVAALRWVQGNIAPFGGDPNCVTIFGNSAGGIIVSSLL 242
Query: 767 LSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCL 928
LSP++AGLFHRAI++SGV+ L D N W AQ+FA+S+AC S S AE++QCL
Sbjct: 243 LSPMSAGLFHRAISQSGVVISKILEDLNAWSEAQNFANSVACGSASPAELVQCL 296
>ref|NP_941074.1| liver carboxylesterase 31 isoform 1 precursor [Mus musculus].
Length = 571
Score = 371 bits (953), Expect = e-103
Identities = 188/294 (63%), Positives = 217/294 (73%)
Frame = +2
Query: 47 SMETVVRTASRXXXXXXXXXXXXXXXXTGREATQPEVDTTLXXXXXXXXXXKGTDRLVNV 226
+MET + S G + TQPEVDT L K TDR+VNV
Sbjct: 3 NMETTAQAGSSVRVWMACLLLIFPTTVIGPKVTQPEVDTPLGRVRGRQVGVKDTDRMVNV 62
Query: 227 FLGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFP 406
FLGIPFAQ PLGP RFSAP P Q WEGVRDAS P MC QD+ERM+N+RF L+ K +IFP
Sbjct: 63 FLGIPFAQAPLGPLRFSAPLPPQPWEGVRDASINPPMCLQDVERMSNSRFTLNEKMKIFP 122
Query: 407 VSEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYR 586
+SEDCL LNIYSP E T G RPVMVW HGGSL+VG++TSHDGSALAAYGDVVVVTVQYR
Sbjct: 123 ISEDCLTLNIYSPTEITAGDKRPVMVWIHGGSLLVGSSTSHDGSALAAYGDVVVVTVQYR 182
Query: 587 LGLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALV 766
LG+ GF STGDKH PGN GFLD VAALRWVQ NI+PFGGD N VT+FG+SAG IVS+L+
Sbjct: 183 LGIFGFLSTGDKHMPGNRGFLDVVAALRWVQGNIAPFGGDPNCVTIFGNSAGGIIVSSLL 242
Query: 767 LSPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCL 928
LSP++AGLFHRAI++SGV+ L D N W AQ+FA+S+AC S S AE++QCL
Sbjct: 243 LSPMSAGLFHRAISQSGVVISKILEDLNAWSEAQNFANSVACGSASPAELVQCL 296
>ref|NP_001152887.1| liver carboxylesterase 31-like isoform 2 [Mus musculus].
Length = 521
Score = 366 bits (940), Expect = e-101
Identities = 181/267 (67%), Positives = 210/267 (78%)
Frame = +2
Query: 128 TGREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEG 307
TG + QPEVDT L K TDR+VNVFLGIPFAQ P+GP RFSAP P Q WEG
Sbjct: 30 TGPKVIQPEVDTPLGRVRGRQVGVKDTDRMVNVFLGIPFAQAPVGPLRFSAPLPPQPWEG 89
Query: 308 VRDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
VRDAS P MC QD+E+M N+RF L+ K +IFP+SEDCL LNIYSP E T G RPVMVW
Sbjct: 90 VRDASINPPMCLQDVEKMINSRFGLNEKIKIFPISEDCLTLNIYSPTEITAGDKRPVMVW 149
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSL+VG++TS DGSALAAYGDVVVVTVQYRLG+ GF STGDKH PGN GFLD VAAL
Sbjct: 150 IHGGSLLVGSSTSQDGSALAAYGDVVVVTVQYRLGIFGFLSTGDKHMPGNRGFLDVVAAL 209
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RWVQ NI+PFGGD N VT+FG+SAG IVS+L LSP++AGLFHRAI++SG++T + D
Sbjct: 210 RWVQGNIAPFGGDPNCVTIFGNSAGGMIVSSLFLSPISAGLFHRAISQSGIVTTIMMEDM 269
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCL 928
PWP AQ+FA+S+AC S S AE++QCL
Sbjct: 270 KPWPEAQNFANSVACGSASPAELVQCL 296
>ref|NP_653094.2| liver carboxylesterase 31-like isoform 1 [Mus musculus].
Length = 571
Score = 366 bits (940), Expect = e-101
Identities = 181/267 (67%), Positives = 210/267 (78%)
Frame = +2
Query: 128 TGREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEG 307
TG + QPEVDT L K TDR+VNVFLGIPFAQ P+GP RFSAP P Q WEG
Sbjct: 30 TGPKVIQPEVDTPLGRVRGRQVGVKDTDRMVNVFLGIPFAQAPVGPLRFSAPLPPQPWEG 89
Query: 308 VRDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
VRDAS P MC QD+E+M N+RF L+ K +IFP+SEDCL LNIYSP E T G RPVMVW
Sbjct: 90 VRDASINPPMCLQDVEKMINSRFGLNEKIKIFPISEDCLTLNIYSPTEITAGDKRPVMVW 149
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSL+VG++TS DGSALAAYGDVVVVTVQYRLG+ GF STGDKH PGN GFLD VAAL
Sbjct: 150 IHGGSLLVGSSTSQDGSALAAYGDVVVVTVQYRLGIFGFLSTGDKHMPGNRGFLDVVAAL 209
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RWVQ NI+PFGGD N VT+FG+SAG IVS+L LSP++AGLFHRAI++SG++T + D
Sbjct: 210 RWVQGNIAPFGGDPNCVTIFGNSAGGMIVSSLFLSPISAGLFHRAISQSGIVTTIMMEDM 269
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCL 928
PWP AQ+FA+S+AC S S AE++QCL
Sbjct: 270 KPWPEAQNFANSVACGSASPAELVQCL 296
>ref|NP_598421.1| liver carboxylesterase 22 precursor [Mus musculus].
Length = 562
Score = 265 bits (678), Expect = 3e-71
Identities = 137/269 (50%), Positives = 176/269 (65%), Gaps = 2/269 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G ++ P VDT +G + V VFLG+PFA+PPLG RF+ P+PA+ W V
Sbjct: 19 GHPSSPPMVDTVQGKVLGKYISLEGFTQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSSV 78
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPV--SEDCLVLNIYSPAEATTGAGRPVMV 484
++A++ P MC QD +L + + P+ SEDCL LNIY+PA+ T PVMV
Sbjct: 79 KNATSYPPMCFQDPVTGQIVNDLLTNRKEKIPLQFSEDCLYLNIYTPADLTKSDRLPVMV 138
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG LV+G A+++DG L+ + +VVVV +QYRLG+ GFFSTGD+H+ GNWG LD VAA
Sbjct: 139 WIHGGGLVLGGASTYDGLVLSTHENVVVVVIQYRLGIWGFFSTGDEHSRGNWGHLDQVAA 198
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLD 844
L WVQ+NI+ FGGD SVT+FG SAG VS LVLSPLA LF RAI+ESGV GL+
Sbjct: 199 LHWVQDNIAKFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFQRAISESGVALTAGLVK 258
Query: 845 SNPWPLAQSFADSLACPSTSSAEMLQCLR 931
N PLA+ A C +T+SA M+ CLR
Sbjct: 259 KNTRPLAEKIAVISGCKNTTSAAMVHCLR 287
>ref|NP_659179.1| liver carboxylesterase B-1 [Mus musculus].
Length = 561
Score = 265 bits (677), Expect = 4e-71
Identities = 133/269 (49%), Positives = 178/269 (66%), Gaps = 2/269 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G ++ P VDT +G + V VFLGIPFA+PPLG RF+ P+PA+ W V
Sbjct: 18 GNPSSPPVVDTAHGKVLGKHVNVEGFSQPVAVFLGIPFAKPPLGSLRFAPPQPAEPWSSV 77
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPV--SEDCLVLNIYSPAEATTGAGRPVMV 484
++A+T P MC QD R ++ + + + SEDCL LNIY+PA+ + + PVMV
Sbjct: 78 KNATTYPPMCSQDAARGQAVNDLITNRKEKIHLEFSEDCLYLNIYTPADFSKNSRLPVMV 137
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG L +G A+S DG AL+AY +VVVV +QYRL + GFFSTGD+H+ GNWG LD VAA
Sbjct: 138 WIHGGGLKLGGASSFDGRALSAYENVVVVAIQYRLSIWGFFSTGDEHSRGNWGHLDQVAA 197
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLD 844
L WVQ+NI+ FGGD SVT+FG SAG VS L+LSPL+ LFHRAI+ESGV +PG+
Sbjct: 198 LHWVQDNIANFGGDPGSVTIFGESAGGYSVSILILSPLSKNLFHRAISESGVAFIPGMFT 257
Query: 845 SNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ P+ + A + C +T+SA ++ C+R
Sbjct: 258 KDVRPITEQIAVTAGCKTTTSAVIVHCMR 286
>ref|XP_003085419.1| PREDICTED: carboxylesterase 2 [Mus musculus].
Length = 542
Score = 264 bits (675), Expect = 6e-71
Identities = 137/268 (51%), Positives = 180/268 (67%), Gaps = 1/268 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++T P T K D V+ FLGIPFA+PP+GP RF+ P P + W GV
Sbjct: 25 GQDSTSPIRTTHTGQILGSLIHMKDLDVGVHSFLGIPFAKPPVGPLRFAPPEPPEPWGGV 84
Query: 311 RDASTAPAMCPQDLERMNNARF-VLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
RD ++ PAMC QD+ MN F +L FP+SEDCL LNIY+P A G+ PVMVW
Sbjct: 85 RDGTSHPAMCLQDITAMNMQAFKLLKLTLPPFPMSEDCLYLNIYAPDHAHEGSNLPVMVW 144
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSLV+G A+ +DGS LAA +VVVVT+QYRLG+LGFFSTGD+ A GNWG+LD VAAL
Sbjct: 145 IHGGSLVIGMASMYDGSMLAAMENVVVVTIQYRLGVLGFFSTGDERARGNWGYLDQVAAL 204
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RW+Q+NI+ FGG+ + VT+FG+SAG + VS+LV+SP++ GLF AI ESGV + L+
Sbjct: 205 RWLQQNIAYFGGNPDRVTIFGTSAGGTSVSSLVVSPMSQGLFRGAIMESGVALISSLISV 264
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ + Q+ A+ C S ++ CLR
Sbjct: 265 SSDVVYQTVANLSGCEQVDSEALVNCLR 292
>ref|XP_488149.1| PREDICTED: carboxylesterase 2 isoform 1 [Mus musculus].
Length = 558
Score = 264 bits (675), Expect = 6e-71
Identities = 137/268 (51%), Positives = 180/268 (67%), Gaps = 1/268 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++T P T K D V+ FLGIPFA+PP+GP RF+ P P + W GV
Sbjct: 25 GQDSTSPIRTTHTGQILGSLIHMKDLDVGVHSFLGIPFAKPPVGPLRFAPPEPPEPWGGV 84
Query: 311 RDASTAPAMCPQDLERMNNARF-VLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
RD ++ PAMC QD+ MN F +L FP+SEDCL LNIY+P A G+ PVMVW
Sbjct: 85 RDGTSHPAMCLQDITAMNMQAFKLLKLTLPPFPMSEDCLYLNIYAPDHAHEGSNLPVMVW 144
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSLV+G A+ +DGS LAA +VVVVT+QYRLG+LGFFSTGD+ A GNWG+LD VAAL
Sbjct: 145 IHGGSLVIGMASMYDGSMLAAMENVVVVTIQYRLGVLGFFSTGDERARGNWGYLDQVAAL 204
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RW+Q+NI+ FGG+ + VT+FG+SAG + VS+LV+SP++ GLF AI ESGV + L+
Sbjct: 205 RWLQQNIAYFGGNPDRVTIFGTSAGGTSVSSLVVSPMSQGLFRGAIMESGVALISSLISV 264
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ + Q+ A+ C S ++ CLR
Sbjct: 265 SSDVVYQTVANLSGCEQVDSEALVNCLR 292
>ref|XP_003086744.1| PREDICTED: carboxylesterase 2 [Mus musculus].
Length = 542
Score = 264 bits (675), Expect = 6e-71
Identities = 137/268 (51%), Positives = 180/268 (67%), Gaps = 1/268 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++T P T K D V+ FLGIPFA+PP+GP RF+ P P + W GV
Sbjct: 25 GQDSTSPIRTTHTGQILGSLIHMKDLDVGVHSFLGIPFAKPPVGPLRFAPPEPPEPWGGV 84
Query: 311 RDASTAPAMCPQDLERMNNARF-VLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
RD ++ PAMC QD+ MN F +L FP+SEDCL LNIY+P A G+ PVMVW
Sbjct: 85 RDGTSHPAMCLQDITAMNMQAFKLLKLTLPPFPMSEDCLYLNIYAPDHAHEGSNLPVMVW 144
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSLV+G A+ +DGS LAA +VVVVT+QYRLG+LGFFSTGD+ A GNWG+LD VAAL
Sbjct: 145 IHGGSLVIGMASMYDGSMLAAMENVVVVTIQYRLGVLGFFSTGDERARGNWGYLDQVAAL 204
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RW+Q+NI+ FGG+ + VT+FG+SAG + VS+LV+SP++ GLF AI ESGV + L+
Sbjct: 205 RWLQQNIAYFGGNPDRVTIFGTSAGGTSVSSLVVSPMSQGLFRGAIMESGVALISSLISV 264
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ + Q+ A+ C S ++ CLR
Sbjct: 265 SSDVVYQTVANLSGCEQVDSEALVNCLR 292
>ref|XP_920139.1| PREDICTED: carboxylesterase 2 isoform 3 [Mus musculus].
Length = 558
Score = 264 bits (675), Expect = 6e-71
Identities = 137/268 (51%), Positives = 180/268 (67%), Gaps = 1/268 (0%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++T P T K D V+ FLGIPFA+PP+GP RF+ P P + W GV
Sbjct: 25 GQDSTSPIRTTHTGQILGSLIHMKDLDVGVHSFLGIPFAKPPVGPLRFAPPEPPEPWGGV 84
Query: 311 RDASTAPAMCPQDLERMNNARF-VLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVW 487
RD ++ PAMC QD+ MN F +L FP+SEDCL LNIY+P A G+ PVMVW
Sbjct: 85 RDGTSHPAMCLQDITAMNMQAFKLLKLTLPPFPMSEDCLYLNIYAPDHAHEGSNLPVMVW 144
Query: 488 FHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAAL 667
HGGSLV+G A+ +DGS LAA +VVVVT+QYRLG+LGFFSTGD+ A GNWG+LD VAAL
Sbjct: 145 IHGGSLVIGMASMYDGSMLAAMENVVVVTIQYRLGVLGFFSTGDERARGNWGYLDQVAAL 204
Query: 668 RWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDS 847
RW+Q+NI+ FGG+ + VT+FG+SAG + VS+LV+SP++ GLF AI ESGV + L+
Sbjct: 205 RWLQQNIAYFGGNPDRVTIFGTSAGGTSVSSLVVSPMSQGLFRGAIMESGVALISSLISV 264
Query: 848 NPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ + Q+ A+ C S ++ CLR
Sbjct: 265 SSDVVYQTVANLSGCEQVDSEALVNCLR 292
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,015,367
Number of extensions: 1094490
Number of successful extensions: 5646
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 5399
Number of HSP's successfully gapped: 35
Length of query: 310
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 209
Effective length of database: 12,583,923
Effective search space: 2630039907
Effective search space used: 2630039907
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008320
(932 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001172106.1| carboxylesterase 3 isoform 2 precursor [Homo... 426 e-119
Alignment gi|NP_079198.2| carboxylesterase 3 isoform 1 precursor [Homo sa... 426 e-119
Alignment gi|NP_003860.2| cocaine esterase isoform 1 [Homo sapiens]. 272 3e-73
Alignment gi|NP_932327.1| cocaine esterase isoform 2 [Homo sapiens]. 272 3e-73
Alignment gi|NP_001020366.1| liver carboxylesterase 1 isoform a precursor... 267 9e-72
Alignment gi|NP_001020365.1| liver carboxylesterase 1 isoform b precursor... 267 9e-72
Alignment gi|NP_001257.4| liver carboxylesterase 1 isoform c precursor [H... 267 9e-72
Alignment gi|NP_001137157.1| carboxylesterase 5A isoform 1 precursor [Hom... 253 2e-67
Alignment gi|NP_659461.1| carboxylesterase 5A isoform 2 precursor [Homo s... 253 2e-67
Alignment gi|NP_001177087.1| carboxylesterase 5A isoform 3 precursor [Hom... 253 2e-67
>ref|NP_001172106.1| carboxylesterase 3 isoform 2 precursor [Homo sapiens].
Length = 568
Score = 426 bits (1096), Expect = e-119
Identities = 211/294 (71%), Positives = 234/294 (79%)
Frame = +2
Query: 50 METVVRTASRXXXXXXXXXXXXXXXXTGREATQPEVDTTLXXXXXXXXXXKGTDRLVNVF 229
ME VR S TG E QPEVDTTL KGTDRLVNVF
Sbjct: 1 MERAVRVESGVLVGVVCLLLACPATATGPEVAQPEVDTTLGRVRGRQVGVKGTDRLVNVF 60
Query: 230 LGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPV 409
LGIPFAQPPLGP RFSAP PAQ WEGVRDASTAP MC QD+E MN++RFVL+GK QIF V
Sbjct: 61 LGIPFAQPPLGPDRFSAPHPAQPWEGVRDASTAPPMCLQDVESMNSSRFVLNGKQQIFSV 120
Query: 410 SEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRL 589
SEDCLVLN+YSPAE G+GRPVMVW HGG+L+ GAATS+DGSALAAYGDVVVVTVQYRL
Sbjct: 121 SEDCLVLNVYSPAEVPAGSGRPVMVWVHGGALITGAATSYDGSALAAYGDVVVVTVQYRL 180
Query: 590 GLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVL 769
G+LGFFSTGD+HAPGN GFLD VAALRWVQENI+PFGGD N VTVFG SAG SI+S LVL
Sbjct: 181 GVLGFFSTGDEHAPGNQGFLDVVAALRWVQENIAPFGGDLNCVTVFGGSAGGSIISGLVL 240
Query: 770 SPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
SP+AAGLFHRAI +SGVIT PG++DS+PWPLAQ A++LAC S+S AEM+QCL+
Sbjct: 241 SPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQKIANTLACSSSSPAEMVQCLQ 294
>ref|NP_079198.2| carboxylesterase 3 isoform 1 precursor [Homo sapiens].
Length = 571
Score = 426 bits (1096), Expect = e-119
Identities = 211/294 (71%), Positives = 234/294 (79%)
Frame = +2
Query: 50 METVVRTASRXXXXXXXXXXXXXXXXTGREATQPEVDTTLXXXXXXXXXXKGTDRLVNVF 229
ME VR S TG E QPEVDTTL KGTDRLVNVF
Sbjct: 1 MERAVRVESGVLVGVVCLLLACPATATGPEVAQPEVDTTLGRVRGRQVGVKGTDRLVNVF 60
Query: 230 LGIPFAQPPLGPGRFSAPRPAQSWEGVRDASTAPAMCPQDLERMNNARFVLDGKHQIFPV 409
LGIPFAQPPLGP RFSAP PAQ WEGVRDASTAP MC QD+E MN++RFVL+GK QIF V
Sbjct: 61 LGIPFAQPPLGPDRFSAPHPAQPWEGVRDASTAPPMCLQDVESMNSSRFVLNGKQQIFSV 120
Query: 410 SEDCLVLNIYSPAEATTGAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRL 589
SEDCLVLN+YSPAE G+GRPVMVW HGG+L+ GAATS+DGSALAAYGDVVVVTVQYRL
Sbjct: 121 SEDCLVLNVYSPAEVPAGSGRPVMVWVHGGALITGAATSYDGSALAAYGDVVVVTVQYRL 180
Query: 590 GLLGFFSTGDKHAPGNWGFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVL 769
G+LGFFSTGD+HAPGN GFLD VAALRWVQENI+PFGGD N VTVFG SAG SI+S LVL
Sbjct: 181 GVLGFFSTGDEHAPGNQGFLDVVAALRWVQENIAPFGGDLNCVTVFGGSAGGSIISGLVL 240
Query: 770 SPLAAGLFHRAIAESGVITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
SP+AAGLFHRAI +SGVIT PG++DS+PWPLAQ A++LAC S+S AEM+QCL+
Sbjct: 241 SPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQKIANTLACSSSSPAEMVQCLQ 294
>ref|NP_003860.2| cocaine esterase isoform 1 [Homo sapiens].
Length = 623
Score = 272 bits (696), Expect = 3e-73
Identities = 142/270 (52%), Positives = 182/270 (67%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++ P T KG + V FLGIPFA+PPLGP RF+ P P +SW GV
Sbjct: 90 GQDSASPIRTTHTGQVLGSLVHVKGANAGVQTFLGIPFAKPPLGPLRFAPPEPPESWSGV 149
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFP---VSEDCLVLNIYSPAEATTGAGRPVM 481
RD +T PAMC QDL + + L + FP +SEDCL L+IY+PA + G+ PVM
Sbjct: 150 RDGTTHPAMCLQDLTAVESE--FLSQFNMTFPSDSMSEDCLYLSIYTPAHSHEGSNLPVM 207
Query: 482 VWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVA 661
VW HGG+LV G A+ +DGS LAA +VVVV +QYRLG+LGFFSTGDKHA GNWG+LD VA
Sbjct: 208 VWIHGGALVFGMASLYDGSMLAALENVVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQVA 267
Query: 662 ALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLL 841
ALRWVQ+NI+ FGG+ + VT+FG SAG + VS+LV+SP++ GLFH AI ESGV LPGL+
Sbjct: 268 ALRWVQQNIAHFGGNPDRVTIFGESAGGTSVSSLVVSPISQGLFHGAIMESGVALLPGLI 327
Query: 842 DSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
S+ ++ A+ AC S ++ CLR
Sbjct: 328 ASSADVISTVVANLSACDQVDSEALVGCLR 357
>ref|NP_932327.1| cocaine esterase isoform 2 [Homo sapiens].
Length = 607
Score = 272 bits (696), Expect = 3e-73
Identities = 142/270 (52%), Positives = 182/270 (67%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G+++ P T KG + V FLGIPFA+PPLGP RF+ P P +SW GV
Sbjct: 90 GQDSASPIRTTHTGQVLGSLVHVKGANAGVQTFLGIPFAKPPLGPLRFAPPEPPESWSGV 149
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFP---VSEDCLVLNIYSPAEATTGAGRPVM 481
RD +T PAMC QDL + + L + FP +SEDCL L+IY+PA + G+ PVM
Sbjct: 150 RDGTTHPAMCLQDLTAVESE--FLSQFNMTFPSDSMSEDCLYLSIYTPAHSHEGSNLPVM 207
Query: 482 VWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVA 661
VW HGG+LV G A+ +DGS LAA +VVVV +QYRLG+LGFFSTGDKHA GNWG+LD VA
Sbjct: 208 VWIHGGALVFGMASLYDGSMLAALENVVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQVA 267
Query: 662 ALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLL 841
ALRWVQ+NI+ FGG+ + VT+FG SAG + VS+LV+SP++ GLFH AI ESGV LPGL+
Sbjct: 268 ALRWVQQNIAHFGGNPDRVTIFGESAGGTSVSSLVVSPISQGLFHGAIMESGVALLPGLI 327
Query: 842 DSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
S+ ++ A+ AC S ++ CLR
Sbjct: 328 ASSADVISTVVANLSACDQVDSEALVGCLR 357
>ref|NP_001020366.1| liver carboxylesterase 1 isoform a precursor [Homo sapiens].
Length = 568
Score = 267 bits (683), Expect = 9e-72
Identities = 141/270 (52%), Positives = 184/270 (68%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G ++ P VDT +G + V +FLGIPFA+PPLGP RF+ P+PA+ W V
Sbjct: 19 GHPSSPPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFV 78
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPV--SEDCLVLNIYSPAEATTGAGRPVMV 484
++A++ P MC QD + + + + P+ SEDCL LNIY+PA+ T PVMV
Sbjct: 79 KNATSYPPMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMV 138
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG L+VGAA+++DG ALAA+ +VVVVT+QYRLG+ GFFSTGD+H+ GNWG LD VAA
Sbjct: 139 WIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAA 198
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGV-ITLPGLL 841
LRWVQ+NI+ FGG+ SVT+FG SAG VS LVLSPLA LFHRAI+ESGV +T +
Sbjct: 199 LRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALTSVLVK 258
Query: 842 DSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ PLA+ A + C +T+SA M+ CLR
Sbjct: 259 KGDVKPLAEQIAITAGCKTTTSAVMVHCLR 288
>ref|NP_001020365.1| liver carboxylesterase 1 isoform b precursor [Homo sapiens].
Length = 567
Score = 267 bits (683), Expect = 9e-72
Identities = 141/270 (52%), Positives = 184/270 (68%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G ++ P VDT +G + V +FLGIPFA+PPLGP RF+ P+PA+ W V
Sbjct: 18 GHPSSPPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFV 77
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPV--SEDCLVLNIYSPAEATTGAGRPVMV 484
++A++ P MC QD + + + + P+ SEDCL LNIY+PA+ T PVMV
Sbjct: 78 KNATSYPPMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMV 137
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG L+VGAA+++DG ALAA+ +VVVVT+QYRLG+ GFFSTGD+H+ GNWG LD VAA
Sbjct: 138 WIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAA 197
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGV-ITLPGLL 841
LRWVQ+NI+ FGG+ SVT+FG SAG VS LVLSPLA LFHRAI+ESGV +T +
Sbjct: 198 LRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALTSVLVK 257
Query: 842 DSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ PLA+ A + C +T+SA M+ CLR
Sbjct: 258 KGDVKPLAEQIAITAGCKTTTSAVMVHCLR 287
>ref|NP_001257.4| liver carboxylesterase 1 isoform c precursor [Homo sapiens].
Length = 566
Score = 267 bits (683), Expect = 9e-72
Identities = 141/270 (52%), Positives = 184/270 (68%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G ++ P VDT +G + V +FLGIPFA+PPLGP RF+ P+PA+ W V
Sbjct: 18 GHPSSPPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFV 77
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPV--SEDCLVLNIYSPAEATTGAGRPVMV 484
++A++ P MC QD + + + + P+ SEDCL LNIY+PA+ T PVMV
Sbjct: 78 KNATSYPPMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMV 137
Query: 485 WFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAA 664
W HGG L+VGAA+++DG ALAA+ +VVVVT+QYRLG+ GFFSTGD+H+ GNWG LD VAA
Sbjct: 138 WIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAA 197
Query: 665 LRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGV-ITLPGLL 841
LRWVQ+NI+ FGG+ SVT+FG SAG VS LVLSPLA LFHRAI+ESGV +T +
Sbjct: 198 LRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALTSVLVK 257
Query: 842 DSNPWPLAQSFADSLACPSTSSAEMLQCLR 931
+ PLA+ A + C +T+SA M+ CLR
Sbjct: 258 KGDVKPLAEQIAITAGCKTTTSAVMVHCLR 287
>ref|NP_001137157.1| carboxylesterase 5A isoform 1 precursor [Homo sapiens].
Length = 575
Score = 253 bits (646), Expect = 2e-67
Identities = 136/270 (50%), Positives = 180/270 (66%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G A P+ +T L G+ VNVFLG+PFA PPLG RF+ P+PA W+ +
Sbjct: 25 GPSAEGPQRNTRLGWIQGKQVTVLGSPVPVNVFLGVPFAAPPLGSLRFTNPQPASPWDNL 84
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVWF 490
R+A++ P +C Q+ E + + +L + F VSEDCL LNIY+PA A TG+ PV+VWF
Sbjct: 85 REATSYPNLCLQNSEWLLLDQHMLKVHYPKFGVSEDCLYLNIYAPAHADTGSKLPVLVWF 144
Query: 491 HGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALR 670
GG+ G+A+ DGSALAAY DV+VV VQYRLG+ GFF+T D+HAPGNW F D VAAL
Sbjct: 145 PGGAFKTGSASIFDGSALAAYEDVLVVVVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALS 204
Query: 671 WVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSN 850
WVQ+NI FGGD +SVT+FG SAGA VS+L+LSP+A GLFH+AI ESGV +P L+++
Sbjct: 205 WVQKNIEFFGGDPSSVTIFGESAGAISVSSLILSPMAKGLFHKAIMESGVAIIP-YLEAH 263
Query: 851 PWPLA---QSFADSLACPSTSSAEMLQCLR 931
+ + Q A ++ S +L+CLR
Sbjct: 264 DYEKSEDLQVVAHFCGNNASDSEALLRCLR 293
>ref|NP_659461.1| carboxylesterase 5A isoform 2 precursor [Homo sapiens].
Length = 525
Score = 253 bits (646), Expect = 2e-67
Identities = 136/270 (50%), Positives = 180/270 (66%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G A P+ +T L G+ VNVFLG+PFA PPLG RF+ P+PA W+ +
Sbjct: 25 GPSAEGPQRNTRLGWIQGKQVTVLGSPVPVNVFLGVPFAAPPLGSLRFTNPQPASPWDNL 84
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVWF 490
R+A++ P +C Q+ E + + +L + F VSEDCL LNIY+PA A TG+ PV+VWF
Sbjct: 85 REATSYPNLCLQNSEWLLLDQHMLKVHYPKFGVSEDCLYLNIYAPAHADTGSKLPVLVWF 144
Query: 491 HGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALR 670
GG+ G+A+ DGSALAAY DV+VV VQYRLG+ GFF+T D+HAPGNW F D VAAL
Sbjct: 145 PGGAFKTGSASIFDGSALAAYEDVLVVVVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALS 204
Query: 671 WVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSN 850
WVQ+NI FGGD +SVT+FG SAGA VS+L+LSP+A GLFH+AI ESGV +P L+++
Sbjct: 205 WVQKNIEFFGGDPSSVTIFGESAGAISVSSLILSPMAKGLFHKAIMESGVAIIP-YLEAH 263
Query: 851 PWPLA---QSFADSLACPSTSSAEMLQCLR 931
+ + Q A ++ S +L+CLR
Sbjct: 264 DYEKSEDLQVVAHFCGNNASDSEALLRCLR 293
>ref|NP_001177087.1| carboxylesterase 5A isoform 3 precursor [Homo sapiens].
Length = 604
Score = 253 bits (646), Expect = 2e-67
Identities = 136/270 (50%), Positives = 180/270 (66%), Gaps = 3/270 (1%)
Frame = +2
Query: 131 GREATQPEVDTTLXXXXXXXXXXKGTDRLVNVFLGIPFAQPPLGPGRFSAPRPAQSWEGV 310
G A P+ +T L G+ VNVFLG+PFA PPLG RF+ P+PA W+ +
Sbjct: 54 GPSAEGPQRNTRLGWIQGKQVTVLGSPVPVNVFLGVPFAAPPLGSLRFTNPQPASPWDNL 113
Query: 311 RDASTAPAMCPQDLERMNNARFVLDGKHQIFPVSEDCLVLNIYSPAEATTGAGRPVMVWF 490
R+A++ P +C Q+ E + + +L + F VSEDCL LNIY+PA A TG+ PV+VWF
Sbjct: 114 REATSYPNLCLQNSEWLLLDQHMLKVHYPKFGVSEDCLYLNIYAPAHADTGSKLPVLVWF 173
Query: 491 HGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNWGFLDAVAALR 670
GG+ G+A+ DGSALAAY DV+VV VQYRLG+ GFF+T D+HAPGNW F D VAAL
Sbjct: 174 PGGAFKTGSASIFDGSALAAYEDVLVVVVQYRLGIFGFFTTWDQHAPGNWAFKDQVAALS 233
Query: 671 WVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGVITLPGLLDSN 850
WVQ+NI FGGD +SVT+FG SAGA VS+L+LSP+A GLFH+AI ESGV +P L+++
Sbjct: 234 WVQKNIEFFGGDPSSVTIFGESAGAISVSSLILSPMAKGLFHKAIMESGVAIIP-YLEAH 292
Query: 851 PWPLA---QSFADSLACPSTSSAEMLQCLR 931
+ + Q A ++ S +L+CLR
Sbjct: 293 DYEKSEDLQVVAHFCGNNASDSEALLRCLR 322
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 41,704,546
Number of extensions: 1336621
Number of successful extensions: 7115
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 6841
Number of HSP's successfully gapped: 29
Length of query: 310
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 208
Effective length of database: 14,934,836
Effective search space: 3106445888
Effective search space used: 3106445888
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008320
(932 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL894786.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 359 2e-96
>gb|GL894786.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3416
Length = 27586
Score = 359 bits (181), Expect = 2e-96
Identities = 187/189 (98%)
Strand = Plus / Plus
Query: 131 gggcgagaggccactcaacctgaagtcgacaccaccctgggccgcgtgcgaggccggcag 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10474 gggcgagaggccactcaacctgaagtcgacaccaccctgggccgcgtgcgaggccggcag 10533
Query: 191 gtgggcgtgaagggcactgaccgccttgtgaatgtcttcctgggcatcccgtttgcccag 250
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10534 gtgggggtgaagggcactgaccgccttgtgaatgtcttcctgggcatcccgtttgcccag 10593
Query: 251 ccacccctggggcctggccggttctcagccccacgcccagcgcagtcctgggagggtgtg 310
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 10594 ccacccctggggcctggccggttctcagccccacgcccagcacagtcctgggagggtgtg 10653
Query: 311 cgggatgcc 319
|||||||||
Sbjct: 10654 cgggatgcc 10662
Score = 315 bits (159), Expect = 2e-83
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 607 cagcactggggacaagcacgcgcctggcaactggggcttccttgatgcagtggctgctct 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11952 cagcactggggacaagcacgcgcctggcaactggggcttccttgatgcagtggctgctct 12011
Query: 667 ccgctgggtgcaagagaacatcagcccctttgggggtgacttcaactctgtcaccgtctt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12012 ccgctgggtgcaagagaacatcagcccctttgggggtgacttcaactctgtcaccgtctt 12071
Query: 727 tggtagctctgctggtgcaagcatcgtctctgctctggt 765
|||||||||||||||||||||||||||||||||||||||
Sbjct: 12072 tggtagctctgctggtgcaagcatcgtctctgctctggt 12110
Score = 262 bits (132), Expect = 3e-67
Identities = 132/132 (100%)
Strand = Plus / Plus
Query: 1 gattctacgtgctgccacttctgcccatagtcagttgtaagagaggagcatggagacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9157 gattctacgtgctgccacttctgcccatagtcagttgtaagagaggagcatggagacagt 9216
Query: 61 ggtaagaactgcgtccaggctcttggtctgggtggcctgtgtgcttgtggccctctctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9217 ggtaagaactgcgtccaggctcttggtctgggtggcctgtgtgcttgtggccctctctgc 9276
Query: 121 tgcagtcactgg 132
||||||||||||
Sbjct: 9277 tgcagtcactgg 9288
Score = 210 bits (106), Expect = 1e-51
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 763 ggtcctgtccccgctggctgcagggctgttccatagagctatagcagagagtggagtcat 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12211 ggtcctgtccccgctggctgcagggctgttccatagagctatagcagagagtggagtcat 12270
Query: 823 cacccttccggggttgctggattctaacccctggcccctggctcag 868
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12271 cacccttccggggttgctggattctaacccctggcccctggctcag 12316
Score = 180 bits (91), Expect = 9e-43
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 387 gaaagcaccagatcttcccagtttcagaggactgcctggtcctcaacatctacagcccag 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10995 gaaagcaccagatcttcccagtttcagaggactgcctggtcctcaacatctacagcccag 11054
Query: 447 ctgaggccacgacgggggccgggaggccggt 477
|||||||||||||||||||||||||||||||
Sbjct: 11055 ctgaggccacgacgggggccgggaggccggt 11085
Score = 133 bits (67), Expect = 2e-28
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 866 cagagcttcgcggactccctggcctgcccctccacctcctcggctgagatgttgcagtgc 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12986 cagagcttcgcggactccctggcctgcccctccacctcctcggctgagatgttgcagtgc 13045
Query: 926 cttcggc 932
|||||||
Sbjct: 13046 cttcggc 13052
Score = 111 bits (56), Expect = 7e-22
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 475 ggtcatggtgtggttccatggaggctctttggtggttggtgccgccacctcccacgacgg 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 11236 ggtcatggtgtggttccatggaggctctttggtggttggtgccgccacctcccatgacgg 11295
Score = 109 bits (55), Expect = 3e-21
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 555 gggatgtggtagtggtgacagtccagtaccgcctggggctccttggcttcttcag 609
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11396 gggatgtggtagtggtgacagtccagtaccgcctggggctccttggcttcttcag 11450
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 24,951,057
Number of extensions: 185
Number of successful extensions: 185
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 185
Number of HSP's successfully gapped: 8
Length of query: 932
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 911
Effective length of database: 2,808,413,156
Effective search space: 2558464385116
Effective search space used: 2558464385116
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)