Animal-Genome cDNA 20110601C-008340

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008340
         (1327 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001069690.1| LIM and cysteine-rich domains protein 1 [Bos...   701   0.0  
Alignment   gi|NP_001039855.1| testin [Bos taurus].                              379   e-105
Alignment   gi|XP_001256049.1| PREDICTED: testin [Bos taurus].                   339   4e-93
Alignment   gi|NP_001014886.1| prickle-like protein 3 [Bos taurus].              203   2e-52
Alignment   gi|XP_002697031.1| PREDICTED: Prickle2 protein-like [Bos taurus].    191   2e-48
Alignment   gi|XP_617348.4| PREDICTED: Prickle2 protein-like [Bos taurus].       191   2e-48
Alignment   gi|NP_001096004.1| prickle-like protein 1 [Bos taurus].              174   2e-43
Alignment   gi|XP_002697339.1| PREDICTED: LIM domain only 6-like [Bos tauru...   136   5e-32
Alignment   gi|XP_581253.4| PREDICTED: LIM domain only 6-like [Bos taurus].      136   5e-32
Alignment   gi|NP_001178254.1| LIM homeobox transcription factor 1-alpha [B...    74   4e-13

>ref|NP_001069690.1| LIM and cysteine-rich domains protein 1 [Bos taurus].
          Length = 363

 Score =  701 bits (1809), Expect = 0.0
 Identities = 333/363 (91%), Positives = 337/363 (92%)
 Frame = +1

Query: 115  MAKVAKDLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLS 294
            MAKVAKDLNP VQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDH LS
Sbjct: 1    MAKVAKDLNPRVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHCLS 60

Query: 295  SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW 474
            SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW
Sbjct: 61   SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW 120

Query: 475  APPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELK 654
            APPGVTQKLGLQYMELIPKEKQPVTGTEGA YRRRQLMHQLPIYDQDPSRCRGLLE+ELK
Sbjct: 121  APPGVTQKLGLQYMELIPKEKQPVTGTEGALYRRRQLMHQLPIYDQDPSRCRGLLENELK 180

Query: 655  VMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYV 834
            VMEEFVKQYKSEALGVGEVA                    AETA PT NGS+GDPSKEYV
Sbjct: 181  VMEEFVKQYKSEALGVGEVALPGQGGLPKEEGKQQEKPEGAETAPPTTNGSIGDPSKEYV 240

Query: 835  CELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCE 1014
            CELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCE
Sbjct: 241  CELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCE 300

Query: 1015 SLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS 1194
            SLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYI+T GQLLCPTCSKS
Sbjct: 301  SLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIVTMGQLLCPTCSKS 360

Query: 1195 KRT 1203
            KR+
Sbjct: 361  KRS 363


>ref|NP_001039855.1| testin [Bos taurus].
          Length = 421

 Score =  379 bits (972), Expect = e-105
 Identities = 185/385 (48%), Positives = 243/385 (63%), Gaps = 5/385 (1%)
 Frame = +1

Query: 133  DLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLEDD 312
            DL   V+KM LG +Q   G PCL+CK  C GFE H WRKIC++CKC QE+H +    E+D
Sbjct: 2    DLEAKVKKMGLGHEQGF-GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDVLLSNEED 60

Query: 313  RKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVT 492
            RK+G+L  D+KY+TL A++K  DGI +YKRN MI+TNP+A  K+ + +T+TYEWAPP   
Sbjct: 61   RKVGKLFEDTKYTTLIAKLKS-DGIPMYKRNVMILTNPVAAKKNVSINTVTYEWAPPVQN 119

Query: 493  QKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFV 672
            Q L  QYM+++PKEKQPV G+EGA YR++QL  QLP +DQDPS+C  L   E+K ME+FV
Sbjct: 120  QALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELSPKEVKEMEQFV 179

Query: 673  KQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKE-----YVC 837
            K+YK+EALGVG+V                     + T   TA G++ D S E     Y C
Sbjct: 180  KKYKNEALGVGDVKLPRDMNTQGPNKMYIPGGDRSTT---TAVGAMEDKSAEHKRTQYSC 236

Query: 838  ELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCES 1017
              CK       P +Y++RAGY K WHPACFVC+ C E LVD+IYFWK+G  +CGRHYC+S
Sbjct: 237  YCCKLSMKEGDPAIYAERAGYDKLWHPACFVCSTCHELLVDMIYFWKNGKLYCGRHYCDS 296

Query: 1018 LRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
             +PRC+GCDE+IFS +Y + E+  WH KHF C  C+  L G  Y++   + +C  C    
Sbjct: 297  EKPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDNILAGEIYVMVNDKPVCKPCYVKN 356

Query: 1198 RT*RAICPQPASTGSHQEGEPSVLR 1272
                 +C      G H   +P V R
Sbjct: 357  HA--EVC-----QGCHNAIDPEVQR 374


>ref|XP_001256049.1| PREDICTED: testin [Bos taurus].
          Length = 391

 Score =  339 bits (869), Expect = 4e-93
 Identities = 165/349 (47%), Positives = 221/349 (63%), Gaps = 5/349 (1%)
 Frame = +1

Query: 241  WRKICKSCKCSQEDHFLSSDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMT 420
            +RKIC++CKC QE+H +    E+DRK+G+L  D+KY+TL A++K  DGI +YKRN MI+T
Sbjct: 7    FRKICRNCKCGQEEHDVLLSNEEDRKVGKLFEDTKYTTLIAKLKS-DGIPMYKRNVMILT 65

Query: 421  NPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLP 600
            NP+A  K+ + +T+TYEWAPP   Q L  QYM+++PKEKQPV G+EGA YR++QL  QLP
Sbjct: 66   NPVAAKKNVSINTVTYEWAPPVQNQALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLP 125

Query: 601  IYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAE 780
             +DQDPS+C  L   E+K ME+FVK+YK+EALGVG+V                     + 
Sbjct: 126  AHDQDPSKCHELSPKEVKEMEQFVKKYKNEALGVGDVKLPRDMNTQGPNKMYIPGGDRST 185

Query: 781  TAAPTANGSLGDPSKE-----YVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCS 945
            T   TA G++ D S E     Y C  CK       P +Y++RAGY K WHPACFVC+ C 
Sbjct: 186  T---TAVGAMEDKSAEHKRTQYSCYCCKLSMKEGDPAIYAERAGYDKLWHPACFVCSTCH 242

Query: 946  EPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCE 1125
            E LVD+IYFWK+G  +CGRHYC+S +PRC+GCDE+IFS +Y + E+  WH KHF C  C+
Sbjct: 243  ELLVDMIYFWKNGKLYCGRHYCDSEKPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCD 302

Query: 1126 QQLGGRAYIITKGQLLCPTCSKSKRT*RAICPQPASTGSHQEGEPSVLR 1272
              L G  Y++   + +C  C         +C      G H   +P V R
Sbjct: 303  NILAGEIYVMVNDKPVCKPCYVKNHA--EVC-----QGCHNAIDPEVQR 344


>ref|NP_001014886.1| prickle-like protein 3 [Bos taurus].
          Length = 540

 Score =  203 bits (517), Expect = 2e-52
 Identities = 114/339 (33%), Positives = 158/339 (46%), Gaps = 1/339 (0%)
 Frame = +1

Query: 184  RGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLED-DRKIGRLLMDSKYSTLT 360
            RG PC  C+  C GF  H WRKIC+ CKC +E+H + +   D +R + RL+ D +  +++
Sbjct: 23   RGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQRHSIS 82

Query: 361  ARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQ 540
                                       D    +  Y W PPG+  +   Q+   +P++K 
Sbjct: 83   -------------------------DDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKV 117

Query: 541  PVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXX 720
            P   + G  YR +QL+HQLP +D +   C  L E E K +  F +Q K E LG G V   
Sbjct: 118  PYVNSPGEKYRIKQLLHQLPPHDSEVQYCTALEEEEKKELRAFSQQRKRENLGRGTVRIF 177

Query: 721  XXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGY 900
                                    T  G+        +CE C          V++ RAG 
Sbjct: 178  PV----------------------TITGA--------ICEECGKQIGGGDIAVFASRAGL 207

Query: 901  SKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVE 1080
               WHP CFVC+ C E LVDLIYF+  G  +CGRH+ E LRPRC  CDEIIFS +    E
Sbjct: 208  GACWHPQCFVCSTCRELLVDLIYFYHAGKVYCGRHHAERLRPRCQACDEIIFSPECTEAE 267

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
               WH  HF C  CE  LGG+ Y++ + +  C  C +++
Sbjct: 268  GRHWHMDHFCCFECEASLGGQRYVMRQSRPHCCACYEAR 306


>ref|XP_002697031.1| PREDICTED: Prickle2 protein-like [Bos taurus].
          Length = 947

 Score =  191 bits (484), Expect = 2e-48
 Identities = 108/318 (33%), Positives = 155/318 (48%), Gaps = 2/318 (0%)
 Frame = +1

Query: 247  KICKSCKCSQEDHFLSS-DLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTN 423
            KIC  CKC QE+H +++  L  ++ + +L+ D                  ++RN      
Sbjct: 91   KICLHCKCPQEEHMVTAMPLAMEKTVSKLMFD------------------FQRN------ 126

Query: 424  PIATGKDPTFDTIT-YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLP 600
              +T  D +   +  Y W PPG+  +   QY   +P+EK P   + G   R +QL+HQLP
Sbjct: 127  --STSDDDSGCALEEYAWVPPGLKPEQVHQYYSCLPEEKVPYVNSPGEKLRIKQLLHQLP 184

Query: 601  IYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAE 780
             +D +   C  L E E + ++ F  Q K E LG G V                       
Sbjct: 185  PHDNEVRYCNSLDEEEKRELKLFSNQRKRENLGRGNVRPFPV------------------ 226

Query: 781  TAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVD 960
                T  G+        +CE C G        V++ RAG+   WHP CF+C  C+E LVD
Sbjct: 227  ----TMTGA--------ICEQCGGQINGGDIAVFASRAGHGVSWHPPCFICTVCNELLVD 274

Query: 961  LIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGG 1140
            LIYF++DG  +CGRH+ E L+PRC+ CDEIIF+++    E   WH KHF C  CE  LGG
Sbjct: 275  LIYFYQDGKIYCGRHHAECLKPRCAACDEIIFADECTEAEGRHWHMKHFCCFECETVLGG 334

Query: 1141 RAYIITKGQLLCPTCSKS 1194
            + YI+ +G+  C  C +S
Sbjct: 335  QRYIMKEGRPYCCHCFES 352


>ref|XP_617348.4| PREDICTED: Prickle2 protein-like [Bos taurus].
          Length = 947

 Score =  191 bits (484), Expect = 2e-48
 Identities = 108/318 (33%), Positives = 155/318 (48%), Gaps = 2/318 (0%)
 Frame = +1

Query: 247  KICKSCKCSQEDHFLSS-DLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTN 423
            KIC  CKC QE+H +++  L  ++ + +L+ D                  ++RN      
Sbjct: 91   KICLHCKCPQEEHMVTAMPLAMEKTVSKLMFD------------------FQRN------ 126

Query: 424  PIATGKDPTFDTIT-YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLP 600
              +T  D +   +  Y W PPG+  +   QY   +P+EK P   + G   R +QL+HQLP
Sbjct: 127  --STSDDDSGCALEEYAWVPPGLKPEQVHQYYSCLPEEKVPYVNSPGEKLRIKQLLHQLP 184

Query: 601  IYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAE 780
             +D +   C  L E E + ++ F  Q K E LG G V                       
Sbjct: 185  PHDNEVRYCNSLDEEEKRELKLFSNQRKRENLGRGNVRPFPV------------------ 226

Query: 781  TAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVD 960
                T  G+        +CE C G        V++ RAG+   WHP CF+C  C+E LVD
Sbjct: 227  ----TMTGA--------ICEQCGGQINGGDIAVFASRAGHGVSWHPPCFICTVCNELLVD 274

Query: 961  LIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGG 1140
            LIYF++DG  +CGRH+ E L+PRC+ CDEIIF+++    E   WH KHF C  CE  LGG
Sbjct: 275  LIYFYQDGKIYCGRHHAECLKPRCAACDEIIFADECTEAEGRHWHMKHFCCFECETVLGG 334

Query: 1141 RAYIITKGQLLCPTCSKS 1194
            + YI+ +G+  C  C +S
Sbjct: 335  QRYIMKEGRPYCCHCFES 352


>ref|NP_001096004.1| prickle-like protein 1 [Bos taurus].
          Length = 833

 Score =  174 bits (440), Expect = 2e-43
 Identities = 93/243 (38%), Positives = 122/243 (50%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +    Y   +P+EK P   + G  +R +QL++QLP +D +   C+ L E 
Sbjct: 33   YAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQTLSEE 92

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E K ++ F  Q K EALG G +                                L     
Sbjct: 93   EKKELQVFSAQRKKEALGRGTIKL------------------------------LSRAVM 122

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              VCE C          V++ RAG    WHP+CFVC  CSE LVDLIYF++DG   CGRH
Sbjct: 123  HAVCEQCGLKINGGEIAVFASRAGPGVCWHPSCFVCFTCSELLVDLIYFYQDGKIHCGRH 182

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRCS CDEIIF+++    E   WH KHF C  CE  LGG+ YI+  G+  C  C
Sbjct: 183  HAELLKPRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGC 242

Query: 1186 SKS 1194
             +S
Sbjct: 243  FES 245


>ref|XP_002697339.1| PREDICTED: LIM domain only 6-like [Bos taurus].
          Length = 626

 Score =  136 bits (342), Expect = 5e-32
 Identities = 76/232 (32%), Positives = 99/232 (42%)
 Frame = +1

Query: 577  RQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXX 756
            R L+ QLP  D D   C  L E EL  +  F  Q + EALG G                 
Sbjct: 308  RSLLQQLPPQDSDERYCLALGEEELAELRLFCAQRRREALGQGVACLVPLKL-------- 359

Query: 757  XXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCA 936
                                  +E  CE C+         V++ RAG  + WH ACF C 
Sbjct: 360  ----------------------EECTCENCRERLRPGEYGVFAARAGERRCWHRACFACQ 397

Query: 937  KCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCE 1116
             C + L++LIYF+ DG  +CGRH+ E LRPRC  CD++IFS      E   WH  HF C+
Sbjct: 398  ACGQALINLIYFYHDGRLYCGRHHAELLRPRCPACDQLIFSRRCTEAEGRRWHENHFCCQ 457

Query: 1117 GCEQQLGGRAYIITKGQLLCPTCSKSKRT*RAICPQPASTGSHQEGEPSVLR 1272
             C   LGG  Y +  G   CP+C + + +     P P        GE  + R
Sbjct: 458  DCAGPLGGGRYALPGGGPCCPSCFERRYSDVGSSPAPTLESRASPGEEGLCR 509


>ref|XP_581253.4| PREDICTED: LIM domain only 6-like [Bos taurus].
          Length = 626

 Score =  136 bits (342), Expect = 5e-32
 Identities = 76/232 (32%), Positives = 99/232 (42%)
 Frame = +1

Query: 577  RQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXX 756
            R L+ QLP  D D   C  L E EL  +  F  Q + EALG G                 
Sbjct: 308  RSLLQQLPPQDSDERYCLALGEEELAELRLFCAQRRREALGQGVACLVPLKL-------- 359

Query: 757  XXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCA 936
                                  +E  CE C+         V++ RAG  + WH ACF C 
Sbjct: 360  ----------------------EECTCENCRERLRPGEYGVFAARAGERRCWHRACFACQ 397

Query: 937  KCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCE 1116
             C + L++LIYF+ DG  +CGRH+ E LRPRC  CD++IFS      E   WH  HF C+
Sbjct: 398  ACGQALINLIYFYHDGRLYCGRHHAELLRPRCPACDQLIFSRRCTEAEGRRWHENHFCCQ 457

Query: 1117 GCEQQLGGRAYIITKGQLLCPTCSKSKRT*RAICPQPASTGSHQEGEPSVLR 1272
             C   LGG  Y +  G   CP+C + + +     P P        GE  + R
Sbjct: 458  DCAGPLGGGRYALPGGGPCCPSCFERRYSDVGSSPAPTLESRASPGEEGLCR 509


>ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus].
          Length = 382

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
 Frame = +1

Query: 820  SKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCG 999
            S + VCE C+ V      +  +D       WH  C  CA C EPL +   F++D   +C 
Sbjct: 30   SPKSVCEGCQRVISDRFLLRLNDSF-----WHEQCVQCASCKEPL-ETTCFYRDKKLYCK 83

Query: 1000 RHYCESLRPRCSGCDEIIFSEDY-QRVEDLAWHRKHFVCEGCEQQLG-GRAYIITKGQLL 1173
              Y +    +C GC E I   ++  R +   +H   F C  CE+QL  G  +++ +GQLL
Sbjct: 84   YDYEKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLL 143

Query: 1174 CPTCSKSKRT*RAICPQPASTGSHQEGEPSVLRPS*GFGETASKQQKE 1317
            C    + +R   ++    AS     + E S+ + + G G+ AS+  K+
Sbjct: 144  CKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDSKD 191


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,961,716
Number of extensions: 1514408
Number of successful extensions: 7290
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 7136
Number of HSP's successfully gapped: 65
Length of query: 442
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 337
Effective length of database: 14,207,134
Effective search space: 4787804158
Effective search space used: 4787804158
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008340
         (1327 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_533751.2| PREDICTED: similar to LIM and cysteine-rich dom...   698   0.0  
Alignment   gi|NP_001162159.1| testin [Canis lupus familiaris].                  377   e-104
Alignment   gi|XP_851538.1| PREDICTED: similar to LIM-only protein 6 (Tripl...   202   6e-52
Alignment   gi|XP_548994.2| PREDICTED: similar to LIM domain only 6 isoform...   202   6e-52
Alignment   gi|XP_863911.1| PREDICTED: similar to LIM domain only 6 isoform...   202   6e-52
Alignment   gi|XP_541815.2| PREDICTED: similar to prickle-like 2 [Canis fam...   193   3e-49
Alignment   gi|XP_534833.2| PREDICTED: similar to Prickle-like protein 1 (R...   173   3e-43
Alignment   gi|XP_538916.2| PREDICTED: similar to over-expressed breast tum...   142   6e-34
Alignment   gi|XP_850071.1| PREDICTED: similar to four and a half LIM domai...    72   9e-13
Alignment   gi|XP_851352.1| PREDICTED: similar to LIM homeobox transcriptio...    72   2e-12

>ref|XP_533751.2| PREDICTED: similar to LIM and cysteine-rich domains 1 (predicted)
            [Canis familiaris].
          Length = 424

 Score =  698 bits (1801), Expect = 0.0
 Identities = 329/375 (87%), Positives = 339/375 (90%)
 Frame = +1

Query: 79   KKQSSVSPAQNKMAKVAKDLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICK 258
            +K +  + A  +MAKVAKDLNPGVQKMSLGQQQSARGVPCL+CKGTCSGFEPH WRKICK
Sbjct: 50   EKPALAAAAPREMAKVAKDLNPGVQKMSLGQQQSARGVPCLKCKGTCSGFEPHPWRKICK 109

Query: 259  SCKCSQEDHFLSSDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATG 438
            SCKCS EDH LSS+LEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATG
Sbjct: 110  SCKCSHEDHCLSSELEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATG 169

Query: 439  KDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDP 618
            KDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDP
Sbjct: 170  KDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDP 229

Query: 619  SRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTA 798
            SRCRGLLE+ELKVMEEFVKQYKSEALGVGEVA                     ET APT 
Sbjct: 230  SRCRGLLENELKVMEEFVKQYKSEALGVGEVALPGQGGLPKEEGKQQEKPEVTETTAPTT 289

Query: 799  NGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWK 978
            NGS+GDPSKEYVCE CKGVAPADSPVVYSDRAGYSKQWHP CFVC KCSEPLVDLIYFWK
Sbjct: 290  NGSIGDPSKEYVCEFCKGVAPADSPVVYSDRAGYSKQWHPTCFVCVKCSEPLVDLIYFWK 349

Query: 979  DGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIIT 1158
            DGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQL GRAYI+T
Sbjct: 350  DGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLSGRAYIVT 409

Query: 1159 KGQLLCPTCSKSKRT 1203
            KGQLLCPTCSKSKR+
Sbjct: 410  KGQLLCPTCSKSKRS 424


>ref|NP_001162159.1| testin [Canis lupus familiaris].
          Length = 421

 Score =  377 bits (969), Expect = e-104
 Identities = 184/385 (47%), Positives = 242/385 (62%), Gaps = 5/385 (1%)
 Frame = +1

Query: 133  DLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLEDD 312
            +L   V+KM LG +Q   G PCL+CK  C GFE H WRKIC++CKC QE+H +    E+D
Sbjct: 2    ELEAKVKKMGLGHEQGF-GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDVLLSNEED 60

Query: 313  RKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVT 492
            RK+G+L  D+KY+TL A++K  DGI +YKRN MI+TNP+A  K+ + +T+TYEWAPP   
Sbjct: 61   RKVGKLFEDTKYTTLIAKLKS-DGIPMYKRNVMILTNPVAAKKNVSINTVTYEWAPPVQN 119

Query: 493  QKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFV 672
            Q L  QYM+++PKEKQPV G+EGA YR++QL  QLP +DQDPS+C  L   E+K ME+FV
Sbjct: 120  QALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELSPKEVKEMEQFV 179

Query: 673  KQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKE-----YVC 837
            K+YKSEALGVG+V                     +  AA    G++ D S E     Y C
Sbjct: 180  KKYKSEALGVGDVKLPREMDAQSTNRMYIPGGDRSTAAAV---GAMEDKSAEHKRTQYSC 236

Query: 838  ELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCES 1017
              CK       P +Y++RAGY K WHPACFVC+ C E LVD+IYFWK+G  +CGRHYC+S
Sbjct: 237  YCCKQSMKEGDPAIYAERAGYDKLWHPACFVCSTCHELLVDMIYFWKNGKLYCGRHYCDS 296

Query: 1018 LRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
             +PRC+GCDE+IFS +Y + E+  WH KHF C  C+  L G  Y++   + +C  C    
Sbjct: 297  EKPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDNILAGEIYVMVNDKPVCKPCYVKN 356

Query: 1198 RT*RAICPQPASTGSHQEGEPSVLR 1272
                 +C      G H   +P V R
Sbjct: 357  HA--VVC-----QGCHNAIDPEVQR 374


>ref|XP_851538.1| PREDICTED: similar to LIM-only protein 6 (Triple LIM domain protein
            6) isoform 3 [Canis familiaris].
          Length = 620

 Score =  202 bits (514), Expect = 6e-52
 Identities = 114/339 (33%), Positives = 157/339 (46%), Gaps = 1/339 (0%)
 Frame = +1

Query: 184  RGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLED-DRKIGRLLMDSKYSTLT 360
            RG PC  C+  C GF  H WRKIC+ CKC +E+H + S   D +R + RL+ D +  +++
Sbjct: 23   RGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHSVPVDLERIMCRLISDFQRHSIS 82

Query: 361  ARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQ 540
                                       D    +  Y W PPG+  +   Q+   +P++K 
Sbjct: 83   -------------------------DDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKV 117

Query: 541  PVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXX 720
            P   + G  YR +QL++QLP +D +   C  L E E K +  F +Q K E LG G V   
Sbjct: 118  PYVNSPGEKYRIKQLLYQLPPHDSEAQYCTALEEEEKKELRSFSQQRKRENLGRGTVRIF 177

Query: 721  XXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGY 900
                                    T  G+        +CE C          V++ RAG 
Sbjct: 178  PV----------------------TITGA--------ICEECGKQIGGGDIAVFASRAGL 207

Query: 901  SKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVE 1080
               WHP CFVC  C E LVDLIYF+  G  +CGRH+ E LRPRC  CDEIIFS +    E
Sbjct: 208  GACWHPQCFVCCTCRELLVDLIYFYHAGKVYCGRHHAERLRPRCQACDEIIFSPECTEAE 267

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
               WH  HF C  CE  LGG+ Y++ + +  C  C +++
Sbjct: 268  GRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCACYEAR 306


>ref|XP_548994.2| PREDICTED: similar to LIM domain only 6 isoform 1 [Canis familiaris].
          Length = 544

 Score =  202 bits (514), Expect = 6e-52
 Identities = 114/339 (33%), Positives = 157/339 (46%), Gaps = 1/339 (0%)
 Frame = +1

Query: 184  RGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLED-DRKIGRLLMDSKYSTLT 360
            RG PC  C+  C GF  H WRKIC+ CKC +E+H + S   D +R + RL+ D +  +++
Sbjct: 23   RGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHSVPVDLERIMCRLISDFQRHSIS 82

Query: 361  ARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQ 540
                                       D    +  Y W PPG+  +   Q+   +P++K 
Sbjct: 83   -------------------------DDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKV 117

Query: 541  PVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXX 720
            P   + G  YR +QL++QLP +D +   C  L E E K +  F +Q K E LG G V   
Sbjct: 118  PYVNSPGEKYRIKQLLYQLPPHDSEAQYCTALEEEEKKELRSFSQQRKRENLGRGTVRIF 177

Query: 721  XXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGY 900
                                    T  G+        +CE C          V++ RAG 
Sbjct: 178  PV----------------------TITGA--------ICEECGKQIGGGDIAVFASRAGL 207

Query: 901  SKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVE 1080
               WHP CFVC  C E LVDLIYF+  G  +CGRH+ E LRPRC  CDEIIFS +    E
Sbjct: 208  GACWHPQCFVCCTCRELLVDLIYFYHAGKVYCGRHHAERLRPRCQACDEIIFSPECTEAE 267

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
               WH  HF C  CE  LGG+ Y++ + +  C  C +++
Sbjct: 268  GRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCACYEAR 306


>ref|XP_863911.1| PREDICTED: similar to LIM domain only 6 isoform 4 [Canis familiaris].
          Length = 470

 Score =  202 bits (514), Expect = 6e-52
 Identities = 114/339 (33%), Positives = 157/339 (46%), Gaps = 1/339 (0%)
 Frame = +1

Query: 184  RGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLED-DRKIGRLLMDSKYSTLT 360
            RG PC  C+  C GF  H WRKIC+ CKC +E+H + S   D +R + RL+ D +  +++
Sbjct: 23   RGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHSVPVDLERIMCRLISDFQRHSIS 82

Query: 361  ARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQ 540
                                       D    +  Y W PPG+  +   Q+   +P++K 
Sbjct: 83   -------------------------DDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKV 117

Query: 541  PVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXX 720
            P   + G  YR +QL++QLP +D +   C  L E E K +  F +Q K E LG G V   
Sbjct: 118  PYVNSPGEKYRIKQLLYQLPPHDSEAQYCTALEEEEKKELRSFSQQRKRENLGRGTVRIF 177

Query: 721  XXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGY 900
                                    T  G+        +CE C          V++ RAG 
Sbjct: 178  PV----------------------TITGA--------ICEECGKQIGGGDIAVFASRAGL 207

Query: 901  SKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVE 1080
               WHP CFVC  C E LVDLIYF+  G  +CGRH+ E LRPRC  CDEIIFS +    E
Sbjct: 208  GACWHPQCFVCCTCRELLVDLIYFYHAGKVYCGRHHAERLRPRCQACDEIIFSPECTEAE 267

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
               WH  HF C  CE  LGG+ Y++ + +  C  C +++
Sbjct: 268  GRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCACYEAR 306


>ref|XP_541815.2| PREDICTED: similar to prickle-like 2 [Canis familiaris].
          Length = 945

 Score =  193 bits (491), Expect = 3e-49
 Identities = 111/326 (34%), Positives = 159/326 (48%), Gaps = 2/326 (0%)
 Frame = +1

Query: 223  GFEPHSWRKICKSCKCSQEDHFLS-SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYK 399
            G +   +RKIC  CKC QE+H ++   LE ++ + +L+ D                  ++
Sbjct: 80   GRKNDDFRKICLHCKCPQEEHMVTVMPLEMEKTVSKLMFD------------------FQ 121

Query: 400  RNRMIMTNPIATGKDPTFDTIT-YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRR 576
            RN        +T  D +   +  Y W PPG+  +   QY   +P+EK P   + G   R 
Sbjct: 122  RN--------STSDDDSGCALEEYAWIPPGLKPEQVHQYYSCLPEEKVPYVNSPGEKLRI 173

Query: 577  RQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXX 756
            +QL+HQLP +D +   C  L E E + ++ F  Q K E LG G V               
Sbjct: 174  KQLLHQLPPHDNEVRYCNSLDEEEKRELKLFSNQRKRENLGRGNVRPFPV---------- 223

Query: 757  XXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCA 936
                        T  G+        +CE C G        V++ RAG+   WHP CF+C 
Sbjct: 224  ------------TMTGA--------ICEQCGGQINGGDIAVFASRAGHGVCWHPPCFICT 263

Query: 937  KCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCE 1116
             C+E LVDLIYF++DG  +CGRH+ E L+PRC+ CDEIIF+++    E   WH KHF C 
Sbjct: 264  VCNELLVDLIYFYQDGKIYCGRHHAECLKPRCAACDEIIFADECTEAEGRHWHMKHFCCF 323

Query: 1117 GCEQQLGGRAYIITKGQLLCPTCSKS 1194
             CE  LGG+ YI+ +G+  C  C +S
Sbjct: 324  ECETVLGGQRYIMKEGRPYCCHCFES 349


>ref|XP_534833.2| PREDICTED: similar to Prickle-like protein 1 (REST/NRSF-interacting
            LIM domain protein 1) [Canis familiaris].
          Length = 832

 Score =  173 bits (439), Expect = 3e-43
 Identities = 92/243 (37%), Positives = 122/243 (50%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +    Y   +P+EK P   + G  +R +QL++QLP +D +   C+ L E 
Sbjct: 33   YAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEE 92

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E K ++ F  Q K EALG G +                                L     
Sbjct: 93   EKKELQVFSAQRKKEALGRGTIKL------------------------------LSRAVM 122

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              VCE C          V++ RAG    WHP+CFVC  C+E LVDLIYF++DG   CGRH
Sbjct: 123  HAVCEQCGLKINGGEIAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRH 182

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRCS CDEIIF+++    E   WH KHF C  CE  LGG+ YI+  G+  C  C
Sbjct: 183  HAELLKPRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGC 242

Query: 1186 SKS 1194
             +S
Sbjct: 243  FES 245


>ref|XP_538916.2| PREDICTED: similar to over-expressed breast tumor protein [Canis
            familiaris].
          Length = 439

 Score =  142 bits (359), Expect = 6e-34
 Identities = 81/241 (33%), Positives = 104/241 (43%), Gaps = 2/241 (0%)
 Frame = +1

Query: 541  PVTGTEGA--YYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVA 714
            P   T+GA  +   R L+ QLP  D D   C    E EL  +  F  Q + EALG G   
Sbjct: 114  PCLDTDGASIWPGLRILLQQLPPQDSDERYCLAFEEDELAELRLFCAQRRREALGQGVAC 173

Query: 715  XXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRA 894
                                                 E+ CE C+         V++ RA
Sbjct: 174  LVLSNLV------------------------------EHTCEKCREPLRPGEYGVFAARA 203

Query: 895  GYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQR 1074
            G  ++WHPACF C  C + L+DLIYF+ DG  +CGRH+ E LRPRC  CD++IFS     
Sbjct: 204  GERRRWHPACFACQACGQALIDLIYFYHDGHLYCGRHHAELLRPRCPACDQLIFSRRCTE 263

Query: 1075 VEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSKRT*RAICPQPASTGSHQEG 1254
             E   WH  HF C+ C   LGG  Y +  G   CP C + + +       PA  G    G
Sbjct: 264  AEGRRWHENHFCCQDCAGPLGGGRYAVPGGGPCCPRCFERRYSAAGSSQAPALEGRASPG 323

Query: 1255 E 1257
            E
Sbjct: 324  E 324


>ref|XP_850071.1| PREDICTED: similar to four and a half LIM domains 3 [Canis
            familiaris].
          Length = 309

 Score = 72.4 bits (176), Expect = 9e-13
 Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
 Frame = +1

Query: 835  CELCKGVAPADS-PVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYC 1011
            C  C+ +   DS  + Y DR      +H  CF C +C   L D  +  +D    C   YC
Sbjct: 69   CAECQQLIGHDSRELFYEDR-----HFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYC 123

Query: 1012 ESLRPRCSGCDEIIFSEDYQ-RVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCS 1188
             +   +CS C E +     +       WH   F+C GCEQ LG R+++  KG   C  C 
Sbjct: 124  SAFSSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCY 183

Query: 1189 KSK 1197
            ++K
Sbjct: 184  ENK 186



 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
 Frame = +1

Query: 835  CELC-KGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYC 1011
            C  C + V P    + Y  +      WH  CF+C+ C +PL    +    GA +C   Y 
Sbjct: 130  CSACGETVMPGSRKLEYGGQT-----WHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYE 184

Query: 1012 ESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAY---------IITKG 1164
                PRC+ C + + ++      D  WHR+  VC GC+  L G+ +         +   G
Sbjct: 185  NKFAPRCARCSKTL-TQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFG 243

Query: 1165 QLLCPTCSKSKR 1200
            +L  P CS  KR
Sbjct: 244  ELFAPKCSSCKR 255



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = +1

Query: 910  WHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIF---SEDYQRVE 1080
            WH  C VC  C  PL    +  +D  P+C   + E   P+CS C   I       Y   E
Sbjct: 210  WHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPITGLGGGKYVSFE 269

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS 1194
            D  WH   F C  C   L G+ ++    Q++C  CS++
Sbjct: 270  DRHWHHSCFSCARCSTSLVGQGFVPDGDQVVCQGCSQA 307



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +1

Query: 925  FVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQR-VEDLAWHRK 1101
            F CAKCSE L    Y   D  P+C   Y  +    C+ C ++I  +  +   ED  +H  
Sbjct: 34   FDCAKCSESLYGRKYIQTDDGPYCVPCYDSTFANTCAECQQLIGHDSRELFYEDRHFHEG 93

Query: 1102 HFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
             F C  C++ L    +     +LLC  C
Sbjct: 94   CFRCCRCQRSLADEPFTCQDSELLCNDC 121


>ref|XP_851352.1| PREDICTED: similar to LIM homeobox transcription factor 1 alpha
            [Canis familiaris].
          Length = 679

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
 Frame = +1

Query: 820  SKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCG 999
            S + VCE C+ V      +  +D       WH  C  CA C EPL +   F++D   +C 
Sbjct: 327  SPKSVCEGCQRVISDRFLLRLNDSF-----WHEQCVQCASCKEPL-ETTCFYRDKKLYCK 380

Query: 1000 RHYCESLRPRCSGCDEIIFSEDY-QRVEDLAWHRKHFVCEGCEQQLG-GRAYIITKGQLL 1173
              Y +    +C GC E I   ++  R +   +H   F C  CE+QL  G  +++ +GQLL
Sbjct: 381  YDYEKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLL 440

Query: 1174 CPTCSKSKRT*RAICPQPASTGSHQEGEPSVLRPS*GFGETASKQQKE 1317
            C    + +R   ++    AS     + E S+ + + G G+ A++  K+
Sbjct: 441  CKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAAEDGKD 488


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 54,076,374
Number of extensions: 1552564
Number of successful extensions: 7554
Number of sequences better than 1.0e-05: 56
Number of HSP's gapped: 7367
Number of HSP's successfully gapped: 99
Length of query: 442
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 336
Effective length of database: 15,340,888
Effective search space: 5154538368
Effective search space used: 5154538368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008340
         (1327 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001008692.1| LIM and cysteine-rich domains protein 1 [Sus...   720   0.0  
Alignment   gi|NP_001116672.1| testin [Sus scrofa].                              376   e-104
Alignment   gi|XP_003135128.1| PREDICTED: prickle-like protein 3 [Sus scrof...   203   2e-52
Alignment   gi|XP_003132345.1| PREDICTED: prickle-like protein 2 [Sus scrof...   179   4e-45
Alignment   gi|XP_003128440.1| PREDICTED: prickle-like protein 4-like [Sus ...   139   4e-33
Alignment   gi|XP_003125689.1| PREDICTED: LIM homeobox transcription factor...    71   2e-12
Alignment   gi|XP_003124907.2| PREDICTED: four and a half LIM domains prote...    70   3e-12
Alignment   gi|NP_999540.1| four and a half LIM domains 1 protein, isoform ...    69   5e-12
Alignment   gi|XP_003127846.1| PREDICTED: four and a half LIM domains prote...    69   5e-12
Alignment   gi|NP_999111.1| four and a half LIM domains protein 3 [Sus scro...    69   6e-12

>ref|NP_001008692.1| LIM and cysteine-rich domains protein 1 [Sus scrofa].
          Length = 363

 Score =  720 bits (1858), Expect = 0.0
 Identities = 343/363 (94%), Positives = 343/363 (94%)
 Frame = +1

Query: 115  MAKVAKDLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLS 294
            MAKVAKDLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLS
Sbjct: 1    MAKVAKDLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLS 60

Query: 295  SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW 474
            SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW
Sbjct: 61   SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW 120

Query: 475  APPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELK 654
            APPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELK
Sbjct: 121  APPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELK 180

Query: 655  VMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYV 834
            VMEEFVKQYKSEALGVGEVA                    AETAAPTANGSLGDPSKEYV
Sbjct: 181  VMEEFVKQYKSEALGVGEVALPGQGGLPKEEGKQQEKPEGAETAAPTANGSLGDPSKEYV 240

Query: 835  CELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCE 1014
            CELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCE
Sbjct: 241  CELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCE 300

Query: 1015 SLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS 1194
            SLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS
Sbjct: 301  SLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS 360

Query: 1195 KRT 1203
            KRT
Sbjct: 361  KRT 363


>ref|NP_001116672.1| testin [Sus scrofa].
          Length = 421

 Score =  376 bits (965), Expect = e-104
 Identities = 184/385 (47%), Positives = 242/385 (62%), Gaps = 5/385 (1%)
 Frame = +1

Query: 133  DLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLEDD 312
            DL   V+KM LG +Q   G PCL+CK  C GFE H WRKIC++CKC QE+H +    E+D
Sbjct: 2    DLEAKVKKMGLGHEQGF-GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDVLLSNEED 60

Query: 313  RKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVT 492
            RK+G+L  D+KY+TL A++K  DGI +YKRN MI+TNP+A  K+ + +T+TYEWAPP   
Sbjct: 61   RKVGKLFEDTKYTTLIAKLKS-DGIPMYKRNVMILTNPVAAKKNISINTVTYEWAPPVQN 119

Query: 493  QKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFV 672
            Q L  QYM+++PKEKQPV G+EGA YR++QL  QLP +DQDPS+C  L   E+K ME+FV
Sbjct: 120  QALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELSPKEVKEMEQFV 179

Query: 673  KQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKE-----YVC 837
            K+YKSEALGVG+V                     + T+A    G++ D S E     Y C
Sbjct: 180  KKYKSEALGVGDVKLPREMNAQGPNRMCIPGGDRSTTSAV---GAMEDKSAEHKTTQYSC 236

Query: 838  ELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCES 1017
              CK       P +Y++RAGY K WHPACFVC+ C E LVD+IYFWK+   +CGRHYC+S
Sbjct: 237  YCCKLSMKEGDPAIYAERAGYDKLWHPACFVCSTCHELLVDMIYFWKNDKLYCGRHYCDS 296

Query: 1018 LRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
             +PRC+GCDE+IFS +Y + E+  WH KHF C  C+  L G  Y++   + +C  C    
Sbjct: 297  EKPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDNILAGEIYVMVNDKPVCKPCYVKN 356

Query: 1198 RT*RAICPQPASTGSHQEGEPSVLR 1272
                 +C      G H   +P V R
Sbjct: 357  HA--VVC-----QGCHNAIDPEVQR 374


>ref|XP_003135128.1| PREDICTED: prickle-like protein 3 [Sus scrofa].
          Length = 622

 Score =  203 bits (516), Expect = 2e-52
 Identities = 114/339 (33%), Positives = 158/339 (46%), Gaps = 1/339 (0%)
 Frame = +1

Query: 184  RGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLED-DRKIGRLLMDSKYSTLT 360
            RG PC  C+  C GF  H WRKIC+ CKC +E+H + +   D +R + RL+ D +  +++
Sbjct: 23   RGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQRHSIS 82

Query: 361  ARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQ 540
                                       D    +  Y W PPG+  +   Q+   +P++K 
Sbjct: 83   -------------------------DDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKV 117

Query: 541  PVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXX 720
            P   + G  YR +QL+HQLP +D +   C  L E E K +  F +Q K E LG G V   
Sbjct: 118  PYVNSPGEKYRIKQLLHQLPPHDSEVQYCTALEEEEKKELRAFSQQRKRENLGRGTVRIF 177

Query: 721  XXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGY 900
                                    T  G+        +CE C          V++ RAG 
Sbjct: 178  PV----------------------TITGA--------ICEECGKQIGGGDIAVFASRAGL 207

Query: 901  SKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVE 1080
               WHP CFVC+ C E LVDLIYF+  G  +CGRH+ E LRPRC  CDEIIFS +    E
Sbjct: 208  GACWHPQCFVCSTCRELLVDLIYFYHAGKVYCGRHHAERLRPRCQACDEIIFSPECTEAE 267

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
               WH  HF C  CE  LGG+ Y++ + +  C  C +++
Sbjct: 268  GRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCACYEAR 306


>ref|XP_003132345.1| PREDICTED: prickle-like protein 2 [Sus scrofa].
          Length = 845

 Score =  179 bits (453), Expect = 4e-45
 Identities = 92/243 (37%), Positives = 125/243 (51%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +   QY   +P+EK P   + G   R +QL+HQLP +D +   C  L E 
Sbjct: 37   YAWVPPGLKPEQVHQYYSCLPEEKVPYVNSPGEKLRIKQLLHQLPPHDNEVRYCNSLDEE 96

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E + ++ F  Q K E LG G V                           T  G+      
Sbjct: 97   EKRELKLFSNQRKRENLGRGNVRPFPV----------------------TMTGA------ 128

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              +CE C G        V++ RAG+   WHP CF+C  C+E LVDLIYF++DG  +CGRH
Sbjct: 129  --ICEQCGGQINGGDIAVFASRAGHGVCWHPPCFICTVCNELLVDLIYFYQDGKIYCGRH 186

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRC+ CDEIIF+++    E   WH KHF C  CE  LGG+ YI+ +G+  C  C
Sbjct: 187  HAECLKPRCAACDEIIFADECTEAEGRHWHMKHFCCFECETVLGGQRYIMKEGRPYCCHC 246

Query: 1186 SKS 1194
             +S
Sbjct: 247  FES 249


>ref|XP_003128440.1| PREDICTED: prickle-like protein 4-like [Sus scrofa].
          Length = 386

 Score =  139 bits (350), Expect = 4e-33
 Identities = 85/249 (34%), Positives = 111/249 (44%)
 Frame = +1

Query: 577  RQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXX 756
            R L+ QLP  D D   C  L E EL  +  F    + EALG G                 
Sbjct: 68   RTLLQQLPPQDSDERYCLTLEEEELAELRLFCAWRRREALGQG----------------- 110

Query: 757  XXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCA 936
                  A    P          +E  CE C+         V++ RAG    WHPACF C 
Sbjct: 111  -----VARLVPPKL--------EECTCEKCREPLRPGEYGVFAARAGEQCCWHPACFACQ 157

Query: 937  KCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCE 1116
             C + L++LIYF+ DG  +CGRH+ E LRPRC  CD++IFS      E   WH  HF C+
Sbjct: 158  ACGQALINLIYFYHDGHLYCGRHHAELLRPRCPACDQLIFSRRCTEAEGRRWHENHFCCQ 217

Query: 1117 GCEQQLGGRAYIITKGQLLCPTCSKSKRT*RAICPQPASTGSHQEGEPSVLRPS*GFGET 1296
             C   LGG  Y +  G   CP+C +S+ +      +PA T   QEG  S+     G GE 
Sbjct: 218  DCAGPLGGGLYALPGGDPCCPSCFESRYSDAG--SRPAGT---QEGRASLGEAELGRGED 272

Query: 1297 ASKQQKESS 1323
                 ++S+
Sbjct: 273  PDSYLRKSA 281


>ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
            scrofa].
          Length = 382

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
 Frame = +1

Query: 820  SKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCG 999
            S + VCE C+ V      +  +D       WH  C  CA C EPL +   F++D   +C 
Sbjct: 30   SPKSVCEGCQRVISDRFLLRLNDSF-----WHEQCVQCASCKEPL-ETTCFYRDKKLYCK 83

Query: 1000 RHYCESLRPRCSGCDEIIFSEDY-QRVEDLAWHRKHFVCEGCEQQL-GGRAYIITKGQLL 1173
              Y +    +C GC E I   ++  R +   +H   F C  CE+QL  G  +++ +GQLL
Sbjct: 84   YDYEKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLL 143

Query: 1174 CPTCSKSKRT*RAICPQPASTGSHQEGEPSVLRPS*GFGETASKQQKE 1317
            C    + +R   ++    AS     + E S+ + + G G+ A +  K+
Sbjct: 144  CKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAPEDGKD 191


>ref|XP_003124907.2| PREDICTED: four and a half LIM domains protein 2-like isoform 2 [Sus
            scrofa].
          Length = 256

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
 Frame = +1

Query: 835  CELCKGVAPAD-SPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYC 1011
            CE C  +   D   + Y DR      WH ACF C++C   LVD  +  K+    C   Y 
Sbjct: 40   CEECGKLIGCDCKDLSYKDR-----HWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYS 94

Query: 1012 ESLRPRCSGCDEIIF-SEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCS 1188
            +    RC  C + I         +  +WH   F C  C+Q +G +++I   GQ  C  C 
Sbjct: 95   QEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCY 154

Query: 1189 KSKRT*RAI-CPQPASTG 1239
            + +   + I C +P ++G
Sbjct: 155  EKQHALQCIQCKKPITSG 172



 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
 Frame = +1

Query: 820  SKEYV--CELC-KGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAP 990
            S+EY   C+ C K + P    + Y         WH  CF C +C +P+    +  KDG  
Sbjct: 94   SQEYSSRCQECRKAIMPGTRKMEYK-----GSSWHETCFTCHRCQQPIGTKSFIPKDGQN 148

Query: 991  WCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQL 1170
            +C   Y +    +C  C + I S      E   WHR+ FVC  C++ L G+ +       
Sbjct: 149  FCVPCYEKQHALQCIQCKKPITSGGVTYREQ-PWHRECFVCTACKKPLSGQRFTSRDEFA 207

Query: 1171 LCPTC 1185
             C  C
Sbjct: 208  YCLGC 212


>ref|NP_999540.1| four and a half LIM domains 1 protein, isoform C [Sus scrofa].
          Length = 296

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
 Frame = +1

Query: 835  CELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCE 1014
            C  C+    ADS  V+      ++ WH  CF C+KC  PL +  +  KD    C +    
Sbjct: 56   CVECRKPIGADSKEVHYK----NRYWHDTCFRCSKCLHPLANETFMAKDNKILCNKCTTR 111

Query: 1015 SLRPRCSGCDEIIFSEDYQRVE--DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCS 1188
               P+C GC + I + D Q VE     WH+  F C  C+Q +G  ++        C TC 
Sbjct: 112  EDSPKCKGCFKPIVAGD-QNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCH 170

Query: 1189 KSK 1197
            ++K
Sbjct: 171  ETK 173



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
 Frame = +1

Query: 802  GSLGDPSKEYVCELCKGVAPADSPV-----VYSDRAGYSKQ-WHPACFVCAKCSEPLVDL 963
            GS     +++ C  C     A   V     + S    Y  Q WH  CFVC  CS+ L   
Sbjct: 155  GSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQ 214

Query: 964  IYFWKDGAPWCGRHYCESLRPRCSGCDEII--FSEDYQRV--EDLAWHRKHFVCEGCEQQ 1131
             +   +   +C   Y   +  +C+GC   I  F +    V  E  +WH   F C+ C   
Sbjct: 215  RFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVN 274

Query: 1132 LGGRAYIITKGQLLCPTCSK 1191
            L  + ++  + Q+ CP C+K
Sbjct: 275  LANKRFVFHQEQVYCPDCAK 294



 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
 Frame = +1

Query: 844  CKGVAPADSPVVYSDRAGYSKQ--WHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCES 1017
            CKG      P+V  D+    K   WH  CF C+ C + +    +F K    +C   +   
Sbjct: 117  CKGCF---KPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETK 173

Query: 1018 LRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS 1194
                C  C++ I S      +D  WH + FVC  C ++L G+ +   + Q  C  C K+
Sbjct: 174  FAKHCVKCNKAITSGGIT-YQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 231


>ref|XP_003127846.1| PREDICTED: four and a half LIM domains protein 3-like [Sus scrofa].
          Length = 280

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
 Frame = +1

Query: 835  CELCKGVAPADS-PVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYC 1011
            C  C+ +   DS  + Y DR      +H  CF C +C   L D  +  +D    C   YC
Sbjct: 40   CAECQQLIGHDSRELFYEDR-----HFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYC 94

Query: 1012 ESLRPRCSGCDEIIFSEDYQ-RVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCS 1188
             +   +CS C E +     +       WH   F+C GCEQ LG  +++  KG   C  C 
Sbjct: 95   SAFSSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCY 154

Query: 1189 KSK 1197
            ++K
Sbjct: 155  ENK 157



 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
 Frame = +1

Query: 835  CELC-KGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYC 1011
            C  C + V P    + Y  +      WH  CF+C+ C +PL    +    GA +C   Y 
Sbjct: 101  CSACGETVMPGSRKLEYGGQT-----WHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCYE 155

Query: 1012 ESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAY---------IITKG 1164
                PRC+ C + + ++      D  WHR+  VC GC+  L G+ +         +   G
Sbjct: 156  NKFAPRCARCSKTL-TQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFG 214

Query: 1165 QLLCPTCSKSKR 1200
            +L  P CS  KR
Sbjct: 215  ELFAPKCSSCKR 226



 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = +1

Query: 910  WHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFS---EDYQRVE 1080
            WH  C VC  C  PL    +  +D  P+C   + E   P+CS C   I       Y   E
Sbjct: 181  WHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPITGLGGGKYVSFE 240

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS 1194
            D  WH   F C  C   L G+ ++    Q+LC  CS++
Sbjct: 241  DRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGCSQA 278



 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +1

Query: 925  FVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQR-VEDLAWHRK 1101
            F CAKCSE L    Y   D  P+C   Y  +    C+ C ++I  +  +   ED  +H  
Sbjct: 5    FDCAKCSESLYGRKYIQTDNGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEG 64

Query: 1102 HFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
             F C  C++ L    +     +LLC  C
Sbjct: 65   CFRCCRCQRSLADEPFTCQDSELLCNDC 92


>ref|NP_999111.1| four and a half LIM domains protein 3 [Sus scrofa].
          Length = 280

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
 Frame = +1

Query: 835  CELCKGVAPADS-PVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYC 1011
            C  C+ +   DS  + Y DR      +H  CF C +C   L D  +  +D    C   YC
Sbjct: 40   CAECQQLIGHDSRELFYEDR-----HFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYC 94

Query: 1012 ESLRPRCSGCDEIIFSEDYQ-RVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCS 1188
             +   +CS C E +     +       WH   F+C GCEQ LG  +++  KG   C  C 
Sbjct: 95   SAFSSQCSACRETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCY 154

Query: 1189 KSK 1197
            ++K
Sbjct: 155  ENK 157



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
 Frame = +1

Query: 835  CELCKG-VAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYC 1011
            C  C+  V P    + Y  +      WH  CF+C+ C +PL    +    GA +C   Y 
Sbjct: 101  CSACRETVMPGSRKLEYGGQT-----WHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCYE 155

Query: 1012 ESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAY---------IITKG 1164
                PRC+ C + + ++      D  WHR+  VC GC+  L G+ +         +   G
Sbjct: 156  NKFAPRCARCSKTL-TQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFG 214

Query: 1165 QLLCPTCSKSKR 1200
            +L  P CS  KR
Sbjct: 215  ELFAPKCSSCKR 226



 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = +1

Query: 910  WHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFS---EDYQRVE 1080
            WH  C VC  C  PL    +  +D  P+C   + E   P+CS C   I       Y   E
Sbjct: 181  WHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPITGLGGGKYVSFE 240

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS 1194
            D  WH   F C  C   L G+ ++    Q+LC  CS++
Sbjct: 241  DRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGCSQA 278



 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +1

Query: 925  FVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQR-VEDLAWHRK 1101
            F CAKCSE L    Y   D  P+C   Y  +    C+ C ++I  +  +   ED  +H  
Sbjct: 5    FDCAKCSESLYGRKYIQTDNGPYCVPCYDSTFANTCAECQQLIGHDSRELFYEDRHFHEG 64

Query: 1102 HFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
             F C  C++ L    +     +LLC  C
Sbjct: 65   CFRCCRCQRSLADEPFTCQDSELLCNDC 92


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,540,696
Number of extensions: 973121
Number of successful extensions: 4436
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 4344
Number of HSP's successfully gapped: 46
Length of query: 442
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 340
Effective length of database: 8,804,438
Effective search space: 2993508920
Effective search space used: 2993508920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008340
         (1327 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_659048.1| LIM and cysteine-rich domains protein 1 [Mus mu...   669   0.0  
Alignment   gi|NP_997059.1| testin [Mus musculus].                               384   e-107
Alignment   gi|NP_001030036.2| Tes-like protein [Mus musculus].                  350   1e-96
Alignment   gi|NP_001074615.1| prickle-like protein 2 isoform a [Mus muscul...   215   5e-56
Alignment   gi|NP_001127933.1| prickle-like protein 2 isoform b [Mus muscul...   178   1e-44
Alignment   gi|NP_001127932.1| prickle-like protein 2 isoform b [Mus muscul...   178   1e-44
Alignment   gi|NP_001127931.1| prickle-like protein 2 isoform b [Mus muscul...   178   1e-44
Alignment   gi|NP_001028389.1| prickle-like protein 1 [Mus musculus].            174   2e-43
Alignment   gi|NP_780306.1| prickle-like protein 3 [Mus musculus].               169   6e-42
Alignment   gi|XP_355019.5| PREDICTED: prickle-like protein 4-like [Mus mus...   131   1e-30

>ref|NP_659048.1| LIM and cysteine-rich domains protein 1 [Mus musculus].
          Length = 365

 Score =  669 bits (1727), Expect = 0.0
 Identities = 316/365 (86%), Positives = 327/365 (89%), Gaps = 2/365 (0%)
 Frame = +1

Query: 115  MAKVAKDLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLS 294
            MAKVAKDLNPGVQKMSLGQQQSARGV CLRCKG CSGFEPHSWRKICKSCKCSQE+H LS
Sbjct: 1    MAKVAKDLNPGVQKMSLGQQQSARGVACLRCKGMCSGFEPHSWRKICKSCKCSQEEHCLS 60

Query: 295  SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW 474
            SDL+DDRKIGRLLMDSKY+TLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW
Sbjct: 61   SDLDDDRKIGRLLMDSKYATLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW 120

Query: 475  APPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELK 654
            APPGVTQKLGLQYMELIPKE+QPVTGTEGA YRRRQLMHQLPIYDQDPSRCRGL+E+ELK
Sbjct: 121  APPGVTQKLGLQYMELIPKERQPVTGTEGALYRRRQLMHQLPIYDQDPSRCRGLVENELK 180

Query: 655  VMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK--E 828
             MEEFVK YKSEALGVGEVA                     ET APT NGSLGDPSK  E
Sbjct: 181  AMEEFVKHYKSEALGVGEVALPGQGGLPKEENKTQEKPEGTETTAPTTNGSLGDPSKEVE 240

Query: 829  YVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHY 1008
            YVCELCKG AP DSPVVY+DRAGYSKQWHP CF C KCSEPLVDLIYFWKDGAPWCGRHY
Sbjct: 241  YVCELCKGAAPVDSPVVYADRAGYSKQWHPTCFQCIKCSEPLVDLIYFWKDGAPWCGRHY 300

Query: 1009 CESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCS 1188
            CES+RPRCSGCDEIIFSEDYQRVEDLAWHRKHF+CEGCEQ L GRAYI+TKGQLLCPTCS
Sbjct: 301  CESVRPRCSGCDEIIFSEDYQRVEDLAWHRKHFICEGCEQLLSGRAYIVTKGQLLCPTCS 360

Query: 1189 KSKRT 1203
            KSKR+
Sbjct: 361  KSKRS 365


>ref|NP_997059.1| testin [Mus musculus].
          Length = 419

 Score =  384 bits (986), Expect = e-107
 Identities = 181/380 (47%), Positives = 240/380 (63%)
 Frame = +1

Query: 133  DLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLEDD 312
            DL   ++KM LG +Q   G PCL+CK  C GFE H WRKIC++CKC QE+H +    E+D
Sbjct: 2    DLETKMKKMGLGHEQGF-GAPCLKCKENCEGFELHFWRKICRNCKCGQEEHDVLLSNEED 60

Query: 313  RKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVT 492
            RK+GRL  D+KY+TL A++K  DGI +YKRN MI+TNP+A  K+ + +T+TYEWAPP   
Sbjct: 61   RKVGRLFEDTKYTTLIAKLKS-DGIPMYKRNVMILTNPVAAKKNVSINTVTYEWAPPVQN 119

Query: 493  QKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFV 672
            Q L  QYM+++PKEKQPV G+EGA YR++QL  QLP +DQDPS+C  L   E+K ME+FV
Sbjct: 120  QALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELSPKEVKEMEQFV 179

Query: 673  KQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKG 852
            K+YKSEALGVG+V                     A  A  + + S      +Y C  CK 
Sbjct: 180  KKYKSEALGVGDVKFPSEMNAQGDKVHNPAGNRHAPAAVASKDKSAESKKTQYSCYCCKH 239

Query: 853  VAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRC 1032
                  P +Y++RAGY K WHPACF+C+ C E LVD+IYFWK+G  +CGRHYC+S +PRC
Sbjct: 240  TMNEGEPAIYAERAGYDKLWHPACFICSTCGELLVDMIYFWKNGKLYCGRHYCDSEKPRC 299

Query: 1033 SGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSKRT*RA 1212
            +GCDE+IFS +Y + E+  WH KHF C  C+  L G+ Y++   + +C  C         
Sbjct: 300  AGCDELIFSNEYTQAENQNWHLKHFCCFDCDHILAGKIYVMVTDKPVCKPCYVKNHA--V 357

Query: 1213 ICPQPASTGSHQEGEPSVLR 1272
            +C      G H   +P V R
Sbjct: 358  VC-----QGCHNAIDPEVQR 372


>ref|NP_001030036.2| Tes-like protein [Mus musculus].
          Length = 411

 Score =  350 bits (899), Expect = 1e-96
 Identities = 159/343 (46%), Positives = 216/343 (62%)
 Frame = +1

Query: 157  MSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLEDDRKIGRLLM 336
            M LG +Q   G PC +CK  C GFE H WRK C++CKC QE+H +    E DRK+GRL  
Sbjct: 2    MGLGHEQGI-GAPCRKCKENCEGFELHFWRKTCRNCKCGQEEHGVLLSTERDRKVGRLFE 60

Query: 337  DSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYM 516
            D+KY  L A++K  + I  +K N M++ NP+   K+   +T+TY+W P    + L  QYM
Sbjct: 61   DAKYINLIAKLKS-EAIPTHKPNVMVLRNPVPAKKNDAINTVTYDWIPSVQNKALARQYM 119

Query: 517  ELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEAL 696
            +++PKEKQPVTG+EGA YR++QL  QLP +DQDPS+C GL  +E+K M++FV++YKSEAL
Sbjct: 120  QMLPKEKQPVTGSEGAQYRKKQLAKQLPAHDQDPSKCHGLSYNEIKKMKQFVEKYKSEAL 179

Query: 697  GVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPV 876
            GVG V                     +     + + S      +Y C  CK       P 
Sbjct: 180  GVGNVKRPSDMNAQGDKVHNPAGIRNSTAVVGSKDKSKESKKTQYTCYCCKHPMKEGDPA 239

Query: 877  VYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIF 1056
            +Y++RAGYSK WHPACF+C+ C E LVD+IYFWK+G  +CGRHYC+S +PRCSGCDE+IF
Sbjct: 240  IYAERAGYSKLWHPACFICSICGEILVDMIYFWKNGKLYCGRHYCDSEKPRCSGCDELIF 299

Query: 1057 SEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            S +Y + E+  WH KHF C  C   L G+ Y++ K + +C  C
Sbjct: 300  SNEYTQAENKNWHLKHFCCIDCHNILAGKIYVMLKSKPVCKPC 342



 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
 Frame = +1

Query: 901  SKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRV- 1077
            +K WH   F C  C   L   IY      P C   Y ++    C GC   I  E+ QRV 
Sbjct: 308  NKNWHLKHFCCIDCHNILAGKIYVMLKSKPVCKPCYMKNHAVVCQGCHNAIDPEE-QRVI 366

Query: 1078 -EDLAWHRKH--FVCEGCEQQLGGRAYIITKGQLLCPTCSKS 1194
             +  +WH     F+C  C + L G  +I  +G + C T  K+
Sbjct: 367  YKIFSWHASTACFLCSCCSKCLIGEKFIPVEGMVFCSTQCKN 408


>ref|NP_001074615.1| prickle-like protein 2 isoform a [Mus musculus].
          Length = 901

 Score =  215 bits (548), Expect = 5e-56
 Identities = 119/338 (35%), Positives = 162/338 (47%), Gaps = 1/338 (0%)
 Frame = +1

Query: 184  RGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLS-SDLEDDRKIGRLLMDSKYSTLT 360
            RG PC  C   C GF  H WRKIC  CKC QE+H ++   LE ++ I +L+ D + S+  
Sbjct: 23   RGQPCNACGDQCPGFALHKWRKICLHCKCPQEEHMVTVMPLEMEKTISKLMFDFQRSS-- 80

Query: 361  ARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQ 540
                                    +  D       Y W PPG+  +   QY   +P+EK 
Sbjct: 81   -----------------------TSDDDSGCALEEYAWVPPGLKPEQVHQYYSCLPEEKV 117

Query: 541  PVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXX 720
            P   + G   R +QL+HQLP +D +   C  L E E + ++ F  Q K E LG G V   
Sbjct: 118  PYVNSAGEKLRIKQLLHQLPPHDNEVRYCNSLDEEEKRELKLFSNQRKRENLGRGNVRPF 177

Query: 721  XXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGY 900
                                    T  G+        +CE C G        V++ RAG+
Sbjct: 178  PV----------------------TMTGA--------ICEQCGGQIKGGDIAVFASRAGH 207

Query: 901  SKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVE 1080
               WHP CFVC  C+E LVDLIYF++DG  +CGRH+ E L+PRC+ CDEIIF+++    E
Sbjct: 208  GICWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRHHAECLKPRCAACDEIIFADECTEAE 267

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKS 1194
               WH +HF C  CE  LGG+ YI+ +G+  C  C +S
Sbjct: 268  GRHWHMRHFCCFECETVLGGQRYIMKEGRPYCCHCFES 305


>ref|NP_001127933.1| prickle-like protein 2 isoform b [Mus musculus].
          Length = 845

 Score =  178 bits (451), Expect = 1e-44
 Identities = 92/243 (37%), Positives = 125/243 (51%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +   QY   +P+EK P   + G   R +QL+HQLP +D +   C  L E 
Sbjct: 37   YAWVPPGLKPEQVHQYYSCLPEEKVPYVNSAGEKLRIKQLLHQLPPHDNEVRYCNSLDEE 96

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E + ++ F  Q K E LG G V                           T  G+      
Sbjct: 97   EKRELKLFSNQRKRENLGRGNVRPFPV----------------------TMTGA------ 128

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              +CE C G        V++ RAG+   WHP CFVC  C+E LVDLIYF++DG  +CGRH
Sbjct: 129  --ICEQCGGQIKGGDIAVFASRAGHGICWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRH 186

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRC+ CDEIIF+++    E   WH +HF C  CE  LGG+ YI+ +G+  C  C
Sbjct: 187  HAECLKPRCAACDEIIFADECTEAEGRHWHMRHFCCFECETVLGGQRYIMKEGRPYCCHC 246

Query: 1186 SKS 1194
             +S
Sbjct: 247  FES 249


>ref|NP_001127932.1| prickle-like protein 2 isoform b [Mus musculus].
          Length = 845

 Score =  178 bits (451), Expect = 1e-44
 Identities = 92/243 (37%), Positives = 125/243 (51%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +   QY   +P+EK P   + G   R +QL+HQLP +D +   C  L E 
Sbjct: 37   YAWVPPGLKPEQVHQYYSCLPEEKVPYVNSAGEKLRIKQLLHQLPPHDNEVRYCNSLDEE 96

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E + ++ F  Q K E LG G V                           T  G+      
Sbjct: 97   EKRELKLFSNQRKRENLGRGNVRPFPV----------------------TMTGA------ 128

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              +CE C G        V++ RAG+   WHP CFVC  C+E LVDLIYF++DG  +CGRH
Sbjct: 129  --ICEQCGGQIKGGDIAVFASRAGHGICWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRH 186

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRC+ CDEIIF+++    E   WH +HF C  CE  LGG+ YI+ +G+  C  C
Sbjct: 187  HAECLKPRCAACDEIIFADECTEAEGRHWHMRHFCCFECETVLGGQRYIMKEGRPYCCHC 246

Query: 1186 SKS 1194
             +S
Sbjct: 247  FES 249


>ref|NP_001127931.1| prickle-like protein 2 isoform b [Mus musculus].
          Length = 845

 Score =  178 bits (451), Expect = 1e-44
 Identities = 92/243 (37%), Positives = 125/243 (51%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +   QY   +P+EK P   + G   R +QL+HQLP +D +   C  L E 
Sbjct: 37   YAWVPPGLKPEQVHQYYSCLPEEKVPYVNSAGEKLRIKQLLHQLPPHDNEVRYCNSLDEE 96

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E + ++ F  Q K E LG G V                           T  G+      
Sbjct: 97   EKRELKLFSNQRKRENLGRGNVRPFPV----------------------TMTGA------ 128

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              +CE C G        V++ RAG+   WHP CFVC  C+E LVDLIYF++DG  +CGRH
Sbjct: 129  --ICEQCGGQIKGGDIAVFASRAGHGICWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRH 186

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRC+ CDEIIF+++    E   WH +HF C  CE  LGG+ YI+ +G+  C  C
Sbjct: 187  HAECLKPRCAACDEIIFADECTEAEGRHWHMRHFCCFECETVLGGQRYIMKEGRPYCCHC 246

Query: 1186 SKS 1194
             +S
Sbjct: 247  FES 249


>ref|NP_001028389.1| prickle-like protein 1 [Mus musculus].
          Length = 832

 Score =  174 bits (440), Expect = 2e-43
 Identities = 92/243 (37%), Positives = 122/243 (50%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +    Y   +P+EK P   + G  +R +QL++QLP +D +   C+ L E 
Sbjct: 33   YAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEE 92

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E K ++ F  Q K EALG G +                                L     
Sbjct: 93   EKKELQVFSAQRKKEALGRGTIKL------------------------------LSRAVM 122

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              VCE C          V++ RAG    WHP+CFVC  C+E LVDLIYF++DG   CGRH
Sbjct: 123  HAVCEQCGLQMNGGEVAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRH 182

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRCS CDEIIF+++    E   WH KHF C  CE  LGG+ YI+  G+  C  C
Sbjct: 183  HAELLKPRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGC 242

Query: 1186 SKS 1194
             +S
Sbjct: 243  FES 245


>ref|NP_780306.1| prickle-like protein 3 [Mus musculus].
          Length = 556

 Score =  169 bits (427), Expect = 6e-42
 Identities = 88/244 (36%), Positives = 117/244 (47%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +   Q+   +P++K P   + G  YR +QL+HQLP +D +   C  L E 
Sbjct: 25   YAWVPPGLKPEQVYQFFSCLPEDKVPYVNSPGEKYRIKQLLHQLPPHDSEAQYCTALEEE 84

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E K +  F +Q K E LG   V                           T  G+      
Sbjct: 85   EKKELRAFSQQRKRENLGRATVRIFPV----------------------TITGA------ 116

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              +CE C          V++ RAG    WHP CFVC  C E LVDLIYF+  G  +CGRH
Sbjct: 117  --ICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHAGKVYCGRH 174

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E LRPRC  CDEIIFS +    E   WH  HF C  CE  LGG+ Y++ + +  C  C
Sbjct: 175  HAECLRPRCQACDEIIFSPECTEAEGRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCAC 234

Query: 1186 SKSK 1197
             +++
Sbjct: 235  YEAR 238


>ref|XP_355019.5| PREDICTED: prickle-like protein 4-like [Mus musculus].
          Length = 263

 Score =  131 bits (329), Expect = 1e-30
 Identities = 70/203 (34%), Positives = 91/203 (44%)
 Frame = +1

Query: 577  RQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXX 756
            R L+ QLP  D D   C  L E EL  +  F  Q K ++LG G                 
Sbjct: 68   RTLLQQLPPQDSDERYCLALGEEELAQLRLFCAQRKQKSLGQG----------------- 110

Query: 757  XXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCA 936
                  A    P   G        Y C+ CK +       V++ RAG    WH  CF C 
Sbjct: 111  -----VARLLPPKLEG--------YTCKKCKKLLDPGEYGVFAARAGEQSCWHRPCFACQ 157

Query: 937  KCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCE 1116
             C + L++LIYF+ +G  +CGRH+ E LRPRC  CD++IFS+     E   WH  HF C+
Sbjct: 158  ACGQGLINLIYFYHEGHLYCGRHHAELLRPRCPACDQLIFSQRCTEAEGQRWHENHFCCQ 217

Query: 1117 GCEQQLGGRAYIITKGQLLCPTC 1185
             C   L G  Y +  G   CP+C
Sbjct: 218  DCAGPLDGGRYALPGGSPCCPSC 240


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 44,763,814
Number of extensions: 1269589
Number of successful extensions: 5914
Number of sequences better than 1.0e-05: 56
Number of HSP's gapped: 5714
Number of HSP's successfully gapped: 103
Length of query: 442
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 338
Effective length of database: 12,493,815
Effective search space: 4222909470
Effective search space used: 4222909470
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008340
         (1327 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_055398.1| LIM and cysteine-rich domains protein 1 [Homo s...   674   0.0  
Alignment   gi|NP_056456.1| testin isoform 1 [Homo sapiens].                     377   e-104
Alignment   gi|NP_690042.1| testin isoform 2 [Homo sapiens].                     371   e-103
Alignment   gi|NP_006141.2| prickle-like protein 3 [Homo sapiens].               202   4e-52
Alignment   gi|NP_942559.1| prickle-like protein 2 [Homo sapiens].               179   5e-45
Alignment   gi|NP_001138355.1| prickle-like protein 1 [Homo sapiens].            174   2e-43
Alignment   gi|NP_001138354.1| prickle-like protein 1 [Homo sapiens].            174   2e-43
Alignment   gi|NP_001138353.1| prickle-like protein 1 [Homo sapiens].            174   2e-43
Alignment   gi|NP_694571.2| prickle-like protein 1 [Homo sapiens].               174   2e-43
Alignment   gi|NP_037529.3| prickle-like protein 4 [Homo sapiens].               132   9e-31

>ref|NP_055398.1| LIM and cysteine-rich domains protein 1 [Homo sapiens].
          Length = 365

 Score =  674 bits (1739), Expect = 0.0
 Identities = 321/365 (87%), Positives = 330/365 (90%), Gaps = 2/365 (0%)
 Frame = +1

Query: 115  MAKVAKDLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLS 294
            MAKVAKDLNPGV+KMSLGQ QSARGV CL CKGTCSGFEPHSWRKICKSCKCSQEDH L+
Sbjct: 1    MAKVAKDLNPGVKKMSLGQLQSARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDHCLT 60

Query: 295  SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW 474
            SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW
Sbjct: 61   SDLEDDRKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEW 120

Query: 475  APPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELK 654
            APPGVTQKLGLQYMELIPKEKQPVTGTEGA+YRRRQLMHQLPIYDQDPSRCRGLLE+ELK
Sbjct: 121  APPGVTQKLGLQYMELIPKEKQPVTGTEGAFYRRRQLMHQLPIYDQDPSRCRGLLENELK 180

Query: 655  VMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK--E 828
            +MEEFVKQYKSEALGVGEVA                    AET A T NGSL DPSK  E
Sbjct: 181  LMEEFVKQYKSEALGVGEVALPGQGGLPKEEGKQQEKPEGAETTAATTNGSLSDPSKEVE 240

Query: 829  YVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHY 1008
            YVCELCKG AP DSPVVYSDRAGY+KQWHP CFVCAKCSEPLVDLIYFWKDGAPWCGRHY
Sbjct: 241  YVCELCKGAAPPDSPVVYSDRAGYNKQWHPTCFVCAKCSEPLVDLIYFWKDGAPWCGRHY 300

Query: 1009 CESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCS 1188
            CESLRPRCSGCDEIIF+EDYQRVEDLAWHRKHFVCEGCEQ L GRAYI+TKGQLLCPTCS
Sbjct: 301  CESLRPRCSGCDEIIFAEDYQRVEDLAWHRKHFVCEGCEQLLSGRAYIVTKGQLLCPTCS 360

Query: 1189 KSKRT 1203
            KSKR+
Sbjct: 361  KSKRS 365


>ref|NP_056456.1| testin isoform 1 [Homo sapiens].
          Length = 421

 Score =  377 bits (968), Expect = e-104
 Identities = 184/385 (47%), Positives = 242/385 (62%), Gaps = 5/385 (1%)
 Frame = +1

Query: 133  DLNPGVQKMSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLEDD 312
            DL   V+KM LG +Q   G PCL+CK  C GFE H WRKIC++CKC QE+H +    E+D
Sbjct: 2    DLENKVKKMGLGHEQGF-GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDVLLSNEED 60

Query: 313  RKIGRLLMDSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVT 492
            RK+G+L  D+KY+TL A++K  DGI +YKRN MI+TNP+A  K+ + +T+TYEWAPP   
Sbjct: 61   RKVGKLFEDTKYTTLIAKLKS-DGIPMYKRNVMILTNPVAAKKNVSINTVTYEWAPPVQN 119

Query: 493  QKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFV 672
            Q L  QYM+++PKEKQPV G+EGA YR++QL  QLP +DQDPS+C  L   E+K ME+FV
Sbjct: 120  QALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELSPREVKEMEQFV 179

Query: 673  KQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKE-----YVC 837
            K+YKSEALGVG+V                      + + P A G++ D S E     Y C
Sbjct: 180  KKYKSEALGVGDVKLPCEMDAQGPKQMNIPG---GDRSTPAAVGAMEDKSAEHKRTQYSC 236

Query: 838  ELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCES 1017
              CK       P +Y++RAGY K WHPACFVC+ C E LVD+IYFWK+   +CGRHYC+S
Sbjct: 237  YCCKLSMKEGDPAIYAERAGYDKLWHPACFVCSTCHELLVDMIYFWKNEKLYCGRHYCDS 296

Query: 1018 LRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
             +PRC+GCDE+IFS +Y + E+  WH KHF C  C+  L G  Y++   + +C  C    
Sbjct: 297  EKPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAGEIYVMVNDKPVCKPCYVKN 356

Query: 1198 RT*RAICPQPASTGSHQEGEPSVLR 1272
                 +C      G H   +P V R
Sbjct: 357  HA--VVC-----QGCHNAIDPEVQR 374


>ref|NP_690042.1| testin isoform 2 [Homo sapiens].
          Length = 412

 Score =  371 bits (952), Expect = e-103
 Identities = 180/377 (47%), Positives = 237/377 (62%), Gaps = 5/377 (1%)
 Frame = +1

Query: 157  MSLGQQQSARGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLEDDRKIGRLLM 336
            M LG +Q   G PCL+CK  C GFE H WRKIC++CKC QE+H +    E+DRK+G+L  
Sbjct: 1    MGLGHEQGF-GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDVLLSNEEDRKVGKLFE 59

Query: 337  DSKYSTLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYM 516
            D+KY+TL A++K  DGI +YKRN MI+TNP+A  K+ + +T+TYEWAPP   Q L  QYM
Sbjct: 60   DTKYTTLIAKLKS-DGIPMYKRNVMILTNPVAAKKNVSINTVTYEWAPPVQNQALARQYM 118

Query: 517  ELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEAL 696
            +++PKEKQPV G+EGA YR++QL  QLP +DQDPS+C  L   E+K ME+FVK+YKSEAL
Sbjct: 119  QMLPKEKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELSPREVKEMEQFVKKYKSEAL 178

Query: 697  GVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKE-----YVCELCKGVAP 861
            GVG+V                      + + P A G++ D S E     Y C  CK    
Sbjct: 179  GVGDVKLPCEMDAQGPKQMNIPG---GDRSTPAAVGAMEDKSAEHKRTQYSCYCCKLSMK 235

Query: 862  ADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGC 1041
               P +Y++RAGY K WHPACFVC+ C E LVD+IYFWK+   +CGRHYC+S +PRC+GC
Sbjct: 236  EGDPAIYAERAGYDKLWHPACFVCSTCHELLVDMIYFWKNEKLYCGRHYCDSEKPRCAGC 295

Query: 1042 DEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSKRT*RAICP 1221
            DE+IFS +Y + E+  WH KHF C  C+  L G  Y++   + +C  C         +C 
Sbjct: 296  DELIFSNEYTQAENQNWHLKHFCCFDCDSILAGEIYVMVNDKPVCKPCYVKNHA--VVC- 352

Query: 1222 QPASTGSHQEGEPSVLR 1272
                 G H   +P V R
Sbjct: 353  ----QGCHNAIDPEVQR 365


>ref|NP_006141.2| prickle-like protein 3 [Homo sapiens].
          Length = 615

 Score =  202 bits (515), Expect = 4e-52
 Identities = 114/339 (33%), Positives = 157/339 (46%), Gaps = 1/339 (0%)
 Frame = +1

Query: 184  RGVPCLRCKGTCSGFEPHSWRKICKSCKCSQEDHFLSSDLED-DRKIGRLLMDSKYSTLT 360
            RG PC  C+  C GF  H WRKIC+ CKC +E+H + +   D +R + RL+ D +  +++
Sbjct: 23   RGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQRHSIS 82

Query: 361  ARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKEKQ 540
                                       D    +  Y W PPG+  +   Q+   +P++K 
Sbjct: 83   -------------------------DDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKV 117

Query: 541  PVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXX 720
            P   + G  YR +QL+HQLP +D +   C  L E E K +  F +Q K E LG G V   
Sbjct: 118  PYVNSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIF 177

Query: 721  XXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGY 900
                                    T  G+        +CE C          V++ RAG 
Sbjct: 178  PV----------------------TITGA--------ICEECGKQIGGGDIAVFASRAGL 207

Query: 901  SKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVE 1080
               WHP CFVC  C E LVDLIYF+  G  +CGRH+ E LRPRC  CDEIIFS +    E
Sbjct: 208  GACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQACDEIIFSPECTEAE 267

Query: 1081 DLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTCSKSK 1197
               WH  HF C  CE  LGG+ Y++ + +  C  C +++
Sbjct: 268  GRHWHMDHFCCFECEASLGGQRYVMRQSRPHCCACYEAR 306


>ref|NP_942559.1| prickle-like protein 2 [Homo sapiens].
          Length = 844

 Score =  179 bits (454), Expect = 5e-45
 Identities = 93/243 (38%), Positives = 125/243 (51%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +   QY   +P+EK P   + G   R +QL+HQLP +D +   C  L E 
Sbjct: 37   YAWVPPGLKPEQVHQYYSCLPEEKVPYVNSPGEKLRIKQLLHQLPPHDNEVRYCNSLDEE 96

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E + ++ F  Q K E LG G V                           T  G+      
Sbjct: 97   EKRELKLFSSQRKRENLGRGNVRPFPV----------------------TMTGA------ 128

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              +CE C G        V++ RAG+   WHP CFVC  C+E LVDLIYF++DG  +CGRH
Sbjct: 129  --ICEQCGGQINGGDIAVFASRAGHGVCWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRH 186

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRC+ CDEIIF+++    E   WH KHF C  CE  LGG+ YI+ +G+  C  C
Sbjct: 187  HAECLKPRCAACDEIIFADECTEAEGRHWHMKHFCCFECETVLGGQRYIMKEGRPYCCHC 246

Query: 1186 SKS 1194
             +S
Sbjct: 247  FES 249


>ref|NP_001138355.1| prickle-like protein 1 [Homo sapiens].
          Length = 831

 Score =  174 bits (440), Expect = 2e-43
 Identities = 92/243 (37%), Positives = 122/243 (50%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +    Y   +P+EK P   + G  +R +QL++QLP +D +   C+ L E 
Sbjct: 33   YAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEE 92

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E K ++ F  Q K EALG G +                                L     
Sbjct: 93   EKKELQVFSAQRKKEALGRGTIKL------------------------------LSRAVM 122

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              VCE C          V++ RAG    WHP+CFVC  C+E LVDLIYF++DG   CGRH
Sbjct: 123  HAVCEQCGLKINGGEVAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRH 182

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRCS CDEIIF+++    E   WH KHF C  CE  LGG+ YI+  G+  C  C
Sbjct: 183  HAELLKPRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGC 242

Query: 1186 SKS 1194
             +S
Sbjct: 243  FES 245


>ref|NP_001138354.1| prickle-like protein 1 [Homo sapiens].
          Length = 831

 Score =  174 bits (440), Expect = 2e-43
 Identities = 92/243 (37%), Positives = 122/243 (50%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +    Y   +P+EK P   + G  +R +QL++QLP +D +   C+ L E 
Sbjct: 33   YAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEE 92

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E K ++ F  Q K EALG G +                                L     
Sbjct: 93   EKKELQVFSAQRKKEALGRGTIKL------------------------------LSRAVM 122

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              VCE C          V++ RAG    WHP+CFVC  C+E LVDLIYF++DG   CGRH
Sbjct: 123  HAVCEQCGLKINGGEVAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRH 182

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRCS CDEIIF+++    E   WH KHF C  CE  LGG+ YI+  G+  C  C
Sbjct: 183  HAELLKPRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGC 242

Query: 1186 SKS 1194
             +S
Sbjct: 243  FES 245


>ref|NP_001138353.1| prickle-like protein 1 [Homo sapiens].
          Length = 831

 Score =  174 bits (440), Expect = 2e-43
 Identities = 92/243 (37%), Positives = 122/243 (50%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +    Y   +P+EK P   + G  +R +QL++QLP +D +   C+ L E 
Sbjct: 33   YAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEE 92

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E K ++ F  Q K EALG G +                                L     
Sbjct: 93   EKKELQVFSAQRKKEALGRGTIKL------------------------------LSRAVM 122

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              VCE C          V++ RAG    WHP+CFVC  C+E LVDLIYF++DG   CGRH
Sbjct: 123  HAVCEQCGLKINGGEVAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRH 182

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRCS CDEIIF+++    E   WH KHF C  CE  LGG+ YI+  G+  C  C
Sbjct: 183  HAELLKPRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGC 242

Query: 1186 SKS 1194
             +S
Sbjct: 243  FES 245


>ref|NP_694571.2| prickle-like protein 1 [Homo sapiens].
          Length = 831

 Score =  174 bits (440), Expect = 2e-43
 Identities = 92/243 (37%), Positives = 122/243 (50%)
 Frame = +1

Query: 466  YEWAPPGVTQKLGLQYMELIPKEKQPVTGTEGAYYRRRQLMHQLPIYDQDPSRCRGLLES 645
            Y W PPG+  +    Y   +P+EK P   + G  +R +QL++QLP +D +   C+ L E 
Sbjct: 33   YAWVPPGLRPEQIQLYFACLPEEKVPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSEE 92

Query: 646  ELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXXXXXXAETAAPTANGSLGDPSK 825
            E K ++ F  Q K EALG G +                                L     
Sbjct: 93   EKKELQVFSAQRKKEALGRGTIKL------------------------------LSRAVM 122

Query: 826  EYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKCSEPLVDLIYFWKDGAPWCGRH 1005
              VCE C          V++ RAG    WHP+CFVC  C+E LVDLIYF++DG   CGRH
Sbjct: 123  HAVCEQCGLKINGGEVAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRH 182

Query: 1006 YCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGCEQQLGGRAYIITKGQLLCPTC 1185
            + E L+PRCS CDEIIF+++    E   WH KHF C  CE  LGG+ YI+  G+  C  C
Sbjct: 183  HAELLKPRCSACDEIIFADECTEAEGRHWHMKHFCCLECETVLGGQRYIMKDGRPFCCGC 242

Query: 1186 SKS 1194
             +S
Sbjct: 243  FES 245


>ref|NP_037529.3| prickle-like protein 4 [Homo sapiens].
          Length = 384

 Score =  132 bits (331), Expect = 9e-31
 Identities = 70/205 (34%), Positives = 94/205 (45%)
 Frame = +1

Query: 583  LMHQLPIYDQDPSRCRGLLESELKVMEEFVKQYKSEALGVGEVAXXXXXXXXXXXXXXXX 762
            L+ QLP  D D   C  L E E   ++ F  + K EALG G                   
Sbjct: 70   LLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQG------------------- 110

Query: 763  XXXXAETAAPTANGSLGDPSKEYVCELCKGVAPADSPVVYSDRAGYSKQWHPACFVCAKC 942
                A    P   G        + CE C+ +       V++ RAG  + WH  CF C  C
Sbjct: 111  ---VARLVLPKLEG--------HTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQAC 159

Query: 943  SEPLVDLIYFWKDGAPWCGRHYCESLRPRCSGCDEIIFSEDYQRVEDLAWHRKHFVCEGC 1122
             + L++LIYF+ DG  +CGRH+ E LRPRC  CD++IFS      E   WH  HF C+ C
Sbjct: 160  GQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDC 219

Query: 1123 EQQLGGRAYIITKGQLLCPTCSKSK 1197
               LGG  Y +  G   CP+C +++
Sbjct: 220  AGPLGGGRYALPGGSPCCPSCFENR 244


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 53,034,177
Number of extensions: 1524335
Number of successful extensions: 7778
Number of sequences better than 1.0e-05: 78
Number of HSP's gapped: 7480
Number of HSP's successfully gapped: 147
Length of query: 442
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 336
Effective length of database: 14,802,980
Effective search space: 4973801280
Effective search space used: 4973801280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008340
         (1327 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr13                                                         660   0.0  

>Sscrofa_Chr13 
||          Length = 218635234

 Score =  660 bits (333), Expect = 0.0
 Identities = 333/333 (100%)
 Strand = Plus / Plus

                                                                            
Query: 501      gggcctgcagtacatggagctcattcccaaggagaagcagcccgtgacaggcaccgaggg 560
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72261037 gggcctgcagtacatggagctcattcccaaggagaagcagcccgtgacaggcaccgaggg 72261096

                                                                            
Query: 561      cgcctactatcgccggcgccagctcatgcaccagctccccatctatgaccaggacccctc 620
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72261097 cgcctactatcgccggcgccagctcatgcaccagctccccatctatgaccaggacccctc 72261156

                                                                            
Query: 621      tcgctgccgcggacttttggagagtgagctgaaggtgatggaagagttcgtgaagcagta 680
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72261157 tcgctgccgcggacttttggagagtgagctgaaggtgatggaagagttcgtgaagcagta 72261216

                                                                            
Query: 681      taagagcgaggccctgggcgtgggcgaagtggccctccccgggcagggcggcttgcccaa 740
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72261217 taagagcgaggccctgggcgtgggcgaagtggccctccccgggcagggcggcttgcccaa 72261276

                                                                            
Query: 741      ggaggaggggaagcagcaggagaagcccgagggcgccgagaccgctgccccaaccgccaa 800
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72261277 ggaggaggggaagcagcaggagaagcccgagggcgccgagaccgctgccccaaccgccaa 72261336

                                                 
Query: 801      cggcagccttggggacccgtcgaaggaatacgt 833
                |||||||||||||||||||||||||||||||||
Sbjct: 72261337 cggcagccttggggacccgtcgaaggaatacgt 72261369



 Score =  551 bits (278), Expect = e-154
 Identities = 281/282 (99%)
 Strand = Plus / Plus

                                                                            
Query: 1046     agataatattctcagaggactaccagcgagtggaggacctggcctggcaccgaaagcact 1105
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72274832 agataatattctcagaggactaccagcgagtggaggacctggcctggcaccgaaagcact 72274891

                                                                            
Query: 1106     ttgtctgcgagggctgcgagcagcagctgggcggccgggcatacatcatcaccaagggtc 1165
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72274892 ttgtctgcgagggctgcgagcagcagctgggcggccgggcatacatcatcaccaagggtc 72274951

                                                                            
Query: 1166     agcttctgtgcccgacgtgcagcaagtccaaacgcacctgaagggccatctgcccacagc 1225
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72274952 agcttctgtgcccgacgtgcagcaagtccaaacgcacctgaagggccatctgcccacagc 72275011

                                                                            
Query: 1226     cagcatccacaggatcccaccaagaaggagagccaagtgtgctaaggccatcctgagggt 1285
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72275012 cagcatccacaggatcccaccaagaaggagagccaagtgtgctaaggccatcctgagggt 72275071

                                                          
Query: 1286     ttggcgagacagccagcaagcaacaaaaagagtcttcttttt 1327
                |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 72275072 ttggcgagacagccagcaagcaacaaaaagagtcatcttttt 72275113



 Score =  498 bits (251), Expect = e-138
 Identities = 258/259 (99%), Gaps = 1/259 (0%)
 Strand = Plus / Plus

                                                                            
Query: 244      aggaaaatatgcaagtcctgcaaatgcagccaagaggaccacttcctgagctctgacctg 303
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72254990 aggaaaatatgcaagtcctgcaaatgcagccaagaggaccacttcctgagctctgacctg 72255049

                                                                            
Query: 304      gaagatgatcggaaaattggccgcttgctgatggactccaagtattccaccctcacagcc 363
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72255050 gaagatgatcggaaaattggccgcttgctgatggactccaagtattccaccctcacagcc 72255109

                                                                            
Query: 364      cgggtgaaaggcggggatggcatccggatttacaagagaaaccggatgatcatgaccaac 423
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72255110 cgggtgaaaggcggggatggcatccggatttacaagagaaaccggatgatcatgaccaac 72255169

                                                                            
Query: 424      cccattgccaccggcaaagatcccacctttgacaccatcacctatgagtgggctccccct 483
                |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 72255170 cccattgccaccggcaaagatcccacctttgacaccatca-ctatgagtgggctccccct 72255228

                                   
Query: 484      ggagtcacccagaaattgg 502
                |||||||||||||||||||
Sbjct: 72255229 ggagtcacccagaaattgg 72255247



 Score =  428 bits (216), Expect = e-117
 Identities = 216/216 (100%)
 Strand = Plus / Plus

                                                                            
Query: 832      gtctgtgagctctgcaagggggtggcccctgccgacagccccgtggtctactcggacaga 891
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72272992 gtctgtgagctctgcaagggggtggcccctgccgacagccccgtggtctactcggacaga 72273051

                                                                            
Query: 892      gcaggttacagcaagcagtggcatcctgcatgcttcgtgtgcgccaagtgctccgagccg 951
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72273052 gcaggttacagcaagcagtggcatcctgcatgcttcgtgtgcgccaagtgctccgagccg 72273111

                                                                            
Query: 952      ctggtggacctcatctacttctggaaggatggggcaccctggtgtggccgtcactactgc 1011
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72273112 ctggtggacctcatctacttctggaaggatggggcaccctggtgtggccgtcactactgc 72273171

                                                    
Query: 1012     gagagtctgcggccccggtgctccggctgtgacgag 1047
                ||||||||||||||||||||||||||||||||||||
Sbjct: 72273172 gagagtctgcggccccggtgctccggctgtgacgag 72273207



 Score =  303 bits (153), Expect = 1e-79
 Identities = 153/153 (100%)
 Strand = Plus / Plus

                                                                            
Query: 4        agagctcccgctgggcccgcgatcctggccattcagccaccgctgcccccgctgcgcgcc 63
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72215847 agagctcccgctgggcccgcgatcctggccattcagccaccgctgcccccgctgcgcgcc 72215906

                                                                            
Query: 64       ctcgagcctctgtctaagaagcaaagctctgtttctccagcccagaacaagatggcaaag 123
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72215907 ctcgagcctctgtctaagaagcaaagctctgtttctccagcccagaacaagatggcaaag 72215966

                                                 
Query: 124      gtggccaaggacctcaacccaggagttcagaag 156
                |||||||||||||||||||||||||||||||||
Sbjct: 72215967 gtggccaaggacctcaacccaggagttcagaag 72215999



 Score =  182 bits (92), Expect = 3e-43
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                            
Query: 155      agatgtccctgggccagcagcagtcagcaagaggtgtgccttgtctgagatgcaagggga 214
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72248300 agatgtccctgggccagcagcagtcagcaagaggtgtgccttgtctgagatgcaagggga 72248359

                                                
Query: 215      cgtgttcgggcttcgagccacattcgtggagg 246
                ||||||||||||||||||||||||||||||||
Sbjct: 72248360 cgtgttcgggcttcgagccacattcgtggagg 72248391


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 33,522,095
Number of extensions: 246
Number of successful extensions: 246
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 245
Number of HSP's successfully gapped: 6
Length of query: 1327
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1306
Effective length of database: 2,808,413,156
Effective search space: 3667787581736
Effective search space used: 3667787581736
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)