Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008348
(1157 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029544.1| abhydrolase domain-containing protein 11 [Bo... 468 e-132
>ref|NP_001029544.1| abhydrolase domain-containing protein 11 [Bos taurus].
Length = 303
Score = 468 bits (1203), Expect = e-132
Identities = 234/302 (77%), Positives = 259/302 (85%)
Frame = +1
Query: 85 MLRCARAWRLPHRGIGPSSPSFSRVPVALSSSQGGTEPRPVPLSYKLLDGEVARPPLVFL 264
MLR RAW P+RGIG S+ SFSR+P+A SSSQGGTEPRPV LSYKLLDGE A P LVFL
Sbjct: 1 MLRWTRAWTAPYRGIGLSNSSFSRLPIAPSSSQGGTEPRPVRLSYKLLDGEAASPALVFL 60
Query: 265 HGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSXXXXXXXXXXXX 444
HGLFGSK NF+ +AK LAQQTGRRVLTVDARNHG+S HSPDMSYEAMS
Sbjct: 61 HGLFGSKTNFNFVAKTLAQQTGRRVLTVDARNHGESSHSPDMSYEAMSKDLQDLLPHLGL 120
Query: 445 VPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVESTSSSNFPNYVAAMKAIDLPNG 624
VPCVLIGHSMGG+TAMLLALQRPELVERLI VDIS VE+TSSSNFPNY+AAM+A+D+ N
Sbjct: 121 VPCVLIGHSMGGRTAMLLALQRPELVERLIAVDISQVETTSSSNFPNYIAAMRAVDMANE 180
Query: 625 ASLSSARKLASEKLSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPR 804
ASLS ARKLA E+L SV+QS S+RQ LLTNLVEVDG FVWR+NLDAL+QH DKIL+FP R
Sbjct: 181 ASLSGARKLADERLRSVIQSASIRQLLLTNLVEVDGRFVWRLNLDALAQHLDKILDFPAR 240
Query: 805 QESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRS 984
QE+YSGP LFL GGNSQF+LPSH+PEIRRLFPRAQMQT+PNAGH VHSD PQDFMAA++S
Sbjct: 241 QETYSGPTLFLRGGNSQFLLPSHYPEIRRLFPRAQMQTVPNAGHWVHSDRPQDFMAAVQS 300
Query: 985 FL 990
FL
Sbjct: 301 FL 302
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 48,618,975
Number of extensions: 1410241
Number of successful extensions: 5182
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 5171
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 281
Effective length of database: 14,240,222
Effective search space: 4001502382
Effective search space used: 4001502382
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008348
(1157 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_546921.1| PREDICTED: similar to abhydrolase domain contai... 456 e-128
Alignment gi|XP_857286.1| PREDICTED: similar to abhydrolase domain contai... 441 e-124
Alignment gi|XP_860645.1| PREDICTED: similar to protein phosphatase methy... 49 9e-06
>ref|XP_546921.1| PREDICTED: similar to abhydrolase domain containing 11 isoform 1
isoform 1 [Canis familiaris].
Length = 304
Score = 456 bits (1172), Expect = e-128
Identities = 232/303 (76%), Positives = 259/303 (85%), Gaps = 1/303 (0%)
Frame = +1
Query: 85 MLRCARAWRLPHRGIGPSSPSFSRVPVALSSS-QGGTEPRPVPLSYKLLDGEVARPPLVF 261
MLR ARAWRLP R +GP + SFS VPVA SSS + G EPR V LSYKLLDGE ARP LVF
Sbjct: 1 MLRWARAWRLPVRALGPCNLSFSGVPVAHSSSGRSGAEPRSVLLSYKLLDGEAARPALVF 60
Query: 262 LHGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSXXXXXXXXXXX 441
LHGLFGSK NF+SIAKALAQQTGRRVLTVDARNHGDSPHSP+MSYEAMS
Sbjct: 61 LHGLFGSKTNFNSIAKALAQQTGRRVLTVDARNHGDSPHSPEMSYEAMSQDLQDLLPQLG 120
Query: 442 XVPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVESTSSSNFPNYVAAMKAIDLPN 621
VPCVLIGHSMGGKTAMLLALQRPELVERLI VDISPVE+TSSS+FP+Y+AAM+A+D+P+
Sbjct: 121 LVPCVLIGHSMGGKTAMLLALQRPELVERLIAVDISPVETTSSSDFPSYMAAMRAVDIPD 180
Query: 622 GASLSSARKLASEKLSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPP 801
S SSARKLA E+LS+V+Q ++ RQFLLTNLVEVDG FVWRVNL+AL+QH DKIL FPP
Sbjct: 181 EVSRSSARKLADEQLSTVIQDMAERQFLLTNLVEVDGRFVWRVNLEALAQHVDKILAFPP 240
Query: 802 RQESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIR 981
RQESY GP LFL+GGNSQ+V PSHH EIRRLFP+AQMQT+PNAGH +H+D PQDF+AAIR
Sbjct: 241 RQESYLGPTLFLLGGNSQYVHPSHHAEIRRLFPQAQMQTVPNAGHWIHADCPQDFVAAIR 300
Query: 982 SFL 990
FL
Sbjct: 301 GFL 303
>ref|XP_857286.1| PREDICTED: similar to abhydrolase domain containing 11 isoform 2
isoform 3 [Canis familiaris].
Length = 298
Score = 441 bits (1135), Expect = e-124
Identities = 227/303 (74%), Positives = 254/303 (83%), Gaps = 1/303 (0%)
Frame = +1
Query: 85 MLRCARAWRLPHRGIGPSSPSFSRVPVALSSS-QGGTEPRPVPLSYKLLDGEVARPPLVF 261
MLR ARAWRLP R +GP + SFS VPVA SSS + G EPR LLDGE ARP LVF
Sbjct: 1 MLRWARAWRLPVRALGPCNLSFSGVPVAHSSSGRSGAEPR------SLLDGEAARPALVF 54
Query: 262 LHGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSXXXXXXXXXXX 441
LHGLFGSK NF+SIAKALAQQTGRRVLTVDARNHGDSPHSP+MSYEAMS
Sbjct: 55 LHGLFGSKTNFNSIAKALAQQTGRRVLTVDARNHGDSPHSPEMSYEAMSQDLQDLLPQLG 114
Query: 442 XVPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVESTSSSNFPNYVAAMKAIDLPN 621
VPCVLIGHSMGGKTAMLLALQRPELVERLI VDISPVE+TSSS+FP+Y+AAM+A+D+P+
Sbjct: 115 LVPCVLIGHSMGGKTAMLLALQRPELVERLIAVDISPVETTSSSDFPSYMAAMRAVDIPD 174
Query: 622 GASLSSARKLASEKLSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPP 801
S SSARKLA E+LS+V+Q ++ RQFLLTNLVEVDG FVWRVNL+AL+QH DKIL FPP
Sbjct: 175 EVSRSSARKLADEQLSTVIQDMAERQFLLTNLVEVDGRFVWRVNLEALAQHVDKILAFPP 234
Query: 802 RQESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIR 981
RQESY GP LFL+GGNSQ+V PSHH EIRRLFP+AQMQT+PNAGH +H+D PQDF+AAIR
Sbjct: 235 RQESYLGPTLFLLGGNSQYVHPSHHAEIRRLFPQAQMQTVPNAGHWIHADCPQDFVAAIR 294
Query: 982 SFL 990
FL
Sbjct: 295 GFL 297
>ref|XP_860645.1| PREDICTED: similar to protein phosphatase methylesterase 1 isoform
2 [Canis familiaris].
Length = 221
Score = 48.9 bits (115), Expect = 9e-06
Identities = 54/199 (27%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Frame = +1
Query: 448 PCVLIGHSMGGKTAM----------LLALQRPELVERLIV---VDISPVESTSSS--NFP 582
P +LIGHSMGG A+ LL L ++VE + V + + S+ +
Sbjct: 8 PIMLIGHSMGGAIAVHTASCNLVPSLLGLCMIDVVEENAIEWSVKSGQIRNLESARVSMV 67
Query: 583 NYVAAMKAIDLPNGASLSSARKLASEKLSSVVQSISVRQFLLTNLVEV--DGHFVWRVNL 756
V + I P G S S + E+ S SV + + +E D + WR+ L
Sbjct: 68 GQVKQCEGITSPEG-SKSIVEGIIEEEEEDEEGSESVNKRKKEDDMETKKDHPYTWRIEL 126
Query: 757 DALSQHWDK-ILNFPPRQESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAG 933
++WD S P L L+ G + I ++ + QMQ LP G
Sbjct: 127 AKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRL---DKDLTIGQMQGKFQMQVLPQCG 183
Query: 934 HLVHSDSPQDFMAAIRSFL 990
H VH D+P A+ +FL
Sbjct: 184 HAVHEDAPDKVAEAVATFL 202
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 50,670,886
Number of extensions: 1441267
Number of successful extensions: 5610
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 5597
Number of HSP's successfully gapped: 3
Length of query: 385
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 280
Effective length of database: 15,374,224
Effective search space: 4304782720
Effective search space used: 4304782720
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008348
(1157 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003124459.1| PREDICTED: abhydrolase domain-containing pro... 571 e-163
Alignment gi|XP_003124460.1| PREDICTED: abhydrolase domain-containing pro... 550 e-157
>ref|XP_003124459.1| PREDICTED: abhydrolase domain-containing protein 11-like isoform 1
[Sus scrofa].
Length = 303
Score = 571 bits (1471), Expect = e-163
Identities = 288/302 (95%), Positives = 289/302 (95%)
Frame = +1
Query: 85 MLRCARAWRLPHRGIGPSSPSFSRVPVALSSSQGGTEPRPVPLSYKLLDGEVARPPLVFL 264
MLRCARAWRLPHRGIGPSSPSFSRVPVALSSSQGGTEPRPVPLSYKLLDGEVARPPLVFL
Sbjct: 1 MLRCARAWRLPHRGIGPSSPSFSRVPVALSSSQGGTEPRPVPLSYKLLDGEVARPPLVFL 60
Query: 265 HGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSXXXXXXXXXXXX 444
HGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMS
Sbjct: 61 HGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSQDLQDLLPQLGL 120
Query: 445 VPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVESTSSSNFPNYVAAMKAIDLPNG 624
VPCVLIGHSMGGKTAMLLALQRPELVERLI VDISPVESTSSSNFPNYVAAMKAIDLPNG
Sbjct: 121 VPCVLIGHSMGGKTAMLLALQRPELVERLIAVDISPVESTSSSNFPNYVAAMKAIDLPNG 180
Query: 625 ASLSSARKLASEKLSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPR 804
ASLSSARKLASEKLSSV+QSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPR
Sbjct: 181 ASLSSARKLASEKLSSVIQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPR 240
Query: 805 QESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRS 984
QESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRS
Sbjct: 241 QESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRS 300
Query: 985 FL 990
FL
Sbjct: 301 FL 302
>ref|XP_003124460.1| PREDICTED: abhydrolase domain-containing protein 11-like isoform 2
[Sus scrofa].
Length = 297
Score = 550 bits (1416), Expect = e-157
Identities = 281/302 (93%), Positives = 282/302 (93%)
Frame = +1
Query: 85 MLRCARAWRLPHRGIGPSSPSFSRVPVALSSSQGGTEPRPVPLSYKLLDGEVARPPLVFL 264
MLRCARAWRLPHRGIGPSSPSFSRVPVALSSSQGGTEPR LLDGEVARPPLVFL
Sbjct: 1 MLRCARAWRLPHRGIGPSSPSFSRVPVALSSSQGGTEPR------SLLDGEVARPPLVFL 54
Query: 265 HGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSXXXXXXXXXXXX 444
HGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMS
Sbjct: 55 HGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSQDLQDLLPQLGL 114
Query: 445 VPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVESTSSSNFPNYVAAMKAIDLPNG 624
VPCVLIGHSMGGKTAMLLALQRPELVERLI VDISPVESTSSSNFPNYVAAMKAIDLPNG
Sbjct: 115 VPCVLIGHSMGGKTAMLLALQRPELVERLIAVDISPVESTSSSNFPNYVAAMKAIDLPNG 174
Query: 625 ASLSSARKLASEKLSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPR 804
ASLSSARKLASEKLSSV+QSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPR
Sbjct: 175 ASLSSARKLASEKLSSVIQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPR 234
Query: 805 QESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRS 984
QESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRS
Sbjct: 235 QESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRS 294
Query: 985 FL 990
FL
Sbjct: 295 FL 296
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,646,743
Number of extensions: 938700
Number of successful extensions: 3394
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3384
Number of HSP's successfully gapped: 2
Length of query: 385
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 284
Effective length of database: 8,829,335
Effective search space: 2507531140
Effective search space used: 2507531140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008348
(1157 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_660250.1| abhydrolase domain-containing protein 11 isofor... 395 e-110
Alignment gi|NP_001177366.1| abhydrolase domain-containing protein 11 iso... 311 5e-85
>ref|NP_660250.1| abhydrolase domain-containing protein 11 isoform 1 [Mus musculus].
Length = 307
Score = 395 bits (1015), Expect = e-110
Identities = 198/306 (64%), Positives = 234/306 (76%), Gaps = 4/306 (1%)
Frame = +1
Query: 85 MLRCARAWRLPHRGIGPSSPSFSRVPVAL----SSSQGGTEPRPVPLSYKLLDGEVARPP 252
MLR ARAWR+P +G SSP VPV SS Q + RP+PLSY LLDG+ P
Sbjct: 1 MLRWARAWRVPRGVLGASSPRRLAVPVTFCSSRSSGQENADLRPLPLSYNLLDGDATLPA 60
Query: 253 LVFLHGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSXXXXXXXX 432
+VFLHGLFGSK NF+S+AKA+ Q+TGRRVLTVDARNHGDSPHSPD SYEAMS
Sbjct: 61 IVFLHGLFGSKTNFNSLAKAMVQRTGRRVLTVDARNHGDSPHSPDASYEAMSQDLQGLLP 120
Query: 433 XXXXVPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVESTSSSNFPNYVAAMKAID 612
VPCVL+GHSMGGKTAMLLALQRP++VERL+VVDISPV +T S+ ++AAMKA++
Sbjct: 121 QLGLVPCVLVGHSMGGKTAMLLALQRPDVVERLVVVDISPVGTTPGSHIGAFIAAMKAVE 180
Query: 613 LPNGASLSSARKLASEKLSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILN 792
+P S ARKLA ++LSSVV+ +RQFLLTNLVEV G F WR+NLD L+QH DKI+
Sbjct: 181 IPEKVPHSQARKLADKQLSSVVKEAGIRQFLLTNLVEVGGRFSWRLNLDTLAQHLDKIMT 240
Query: 793 FPPRQESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMA 972
FP ++E YSGP LFL+GGNS +V PSHH EIRRLFP+AQ+QT+PNAGH VHSD PQDFM
Sbjct: 241 FPQQREPYSGPTLFLLGGNSTYVQPSHHSEIRRLFPQAQIQTVPNAGHWVHSDKPQDFMD 300
Query: 973 AIRSFL 990
A+ SFL
Sbjct: 301 AVTSFL 306
>ref|NP_001177366.1| abhydrolase domain-containing protein 11 isoform 2 [Mus musculus].
Length = 227
Score = 311 bits (798), Expect = 5e-85
Identities = 152/226 (67%), Positives = 180/226 (79%)
Frame = +1
Query: 313 LAQQTGRRVLTVDARNHGDSPHSPDMSYEAMSXXXXXXXXXXXXVPCVLIGHSMGGKTAM 492
+ Q+TGRRVLTVDARNHGDSPHSPD SYEAMS VPCVL+GHSMGGKTAM
Sbjct: 1 MVQRTGRRVLTVDARNHGDSPHSPDASYEAMSQDLQGLLPQLGLVPCVLVGHSMGGKTAM 60
Query: 493 LLALQRPELVERLIVVDISPVESTSSSNFPNYVAAMKAIDLPNGASLSSARKLASEKLSS 672
LLALQRP++VERL+VVDISPV +T S+ ++AAMKA+++P S ARKLA ++LSS
Sbjct: 61 LLALQRPDVVERLVVVDISPVGTTPGSHIGAFIAAMKAVEIPEKVPHSQARKLADKQLSS 120
Query: 673 VVQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPRQESYSGPALFLIGGNS 852
VV+ +RQFLLTNLVEV G F WR+NLD L+QH DKI+ FP ++E YSGP LFL+GGNS
Sbjct: 121 VVKEAGIRQFLLTNLVEVGGRFSWRLNLDTLAQHLDKIMTFPQQREPYSGPTLFLLGGNS 180
Query: 853 QFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRSFL 990
+V PSHH EIRRLFP+AQ+QT+PNAGH VHSD PQDFM A+ SFL
Sbjct: 181 TYVQPSHHSEIRRLFPQAQIQTVPNAGHWVHSDKPQDFMDAVTSFL 226
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 41,654,960
Number of extensions: 1162388
Number of successful extensions: 4542
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4509
Number of HSP's successfully gapped: 2
Length of query: 385
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 282
Effective length of database: 12,523,851
Effective search space: 3531725982
Effective search space used: 3531725982
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008348
(1157 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_683710.1| abhydrolase domain-containing protein 11 isofor... 451 e-127
Alignment gi|NP_683711.1| abhydrolase domain-containing protein 11 isofor... 432 e-121
Alignment gi|NP_001138836.1| abhydrolase domain-containing protein 11 iso... 218 6e-57
>ref|NP_683710.1| abhydrolase domain-containing protein 11 isoform 1 [Homo sapiens].
Length = 315
Score = 451 bits (1161), Expect = e-127
Identities = 229/314 (72%), Positives = 255/314 (81%), Gaps = 3/314 (0%)
Frame = +1
Query: 58 VRARSPIPGMLRCARAWRLPHRGIGPSSPSFSRVPVALSSS---QGGTEPRPVPLSYKLL 228
+RA + MLR RAWRLP G+GP PSF+RVPVA SSS +GG EPRP+PLSY+LL
Sbjct: 1 MRAGQQLASMLRWTRAWRLPREGLGPHGPSFARVPVAPSSSSGGRGGAEPRPLPLSYRLL 60
Query: 229 DGEVARPPLVFLHGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMS 408
DGE A P +VFLHGLFGSK NF+SIAK LAQQTGRRVLTVDARNHGDSPHSPDMSYE MS
Sbjct: 61 DGEAALPAVVFLHGLFGSKTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDMSYEIMS 120
Query: 409 XXXXXXXXXXXXVPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVESTSSSNFPNY 588
VPCV++GHSMGGKTAMLLALQRPELVERLI VDISPVEST S+F Y
Sbjct: 121 QDLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLIAVDISPVESTGVSHFATY 180
Query: 589 VAAMKAIDLPNGASLSSARKLASEKLSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALS 768
VAAM+AI++ + S ARKLA E+LSSV+Q ++VRQ LLTNLVEVDG FVWRVNLDAL+
Sbjct: 181 VAAMRAINIADELPRSRARKLADEQLSSVIQDMAVRQHLLTNLVEVDGRFVWRVNLDALT 240
Query: 769 QHWDKILNFPPRQESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHS 948
QH DKIL FP RQESY GP LFL+GGNSQFV PSHHPEI RLFPRAQMQT+PNAGH +H+
Sbjct: 241 QHLDKILAFPQRQESYLGPTLFLLGGNSQFVHPSHHPEIMRLFPRAQMQTVPNAGHWIHA 300
Query: 949 DSPQDFMAAIRSFL 990
D PQDF+AAIR FL
Sbjct: 301 DRPQDFIAAIRGFL 314
>ref|NP_683711.1| abhydrolase domain-containing protein 11 isoform 2 [Homo sapiens].
Length = 308
Score = 432 bits (1111), Expect = e-121
Identities = 224/314 (71%), Positives = 248/314 (78%), Gaps = 3/314 (0%)
Frame = +1
Query: 58 VRARSPIPGMLRCARAWRLPHRGIGPSSPSFSRVPVALSSS---QGGTEPRPVPLSYKLL 228
+RA + MLR RAWRLP G+GP PSF+RVPVA SSS +GG EPR LL
Sbjct: 1 MRAGQQLASMLRWTRAWRLPREGLGPHGPSFARVPVAPSSSSGGRGGAEPR-------LL 53
Query: 229 DGEVARPPLVFLHGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMS 408
DGE A P +VFLHGLFGSK NF+SIAK LAQQTGRRVLTVDARNHGDSPHSPDMSYE MS
Sbjct: 54 DGEAALPAVVFLHGLFGSKTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDMSYEIMS 113
Query: 409 XXXXXXXXXXXXVPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVESTSSSNFPNY 588
VPCV++GHSMGGKTAMLLALQRPELVERLI VDISPVEST S+F Y
Sbjct: 114 QDLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLIAVDISPVESTGVSHFATY 173
Query: 589 VAAMKAIDLPNGASLSSARKLASEKLSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALS 768
VAAM+AI++ + S ARKLA E+LSSV+Q ++VRQ LLTNLVEVDG FVWRVNLDAL+
Sbjct: 174 VAAMRAINIADELPRSRARKLADEQLSSVIQDMAVRQHLLTNLVEVDGRFVWRVNLDALT 233
Query: 769 QHWDKILNFPPRQESYSGPALFLIGGNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHS 948
QH DKIL FP RQESY GP LFL+GGNSQFV PSHHPEI RLFPRAQMQT+PNAGH +H+
Sbjct: 234 QHLDKILAFPQRQESYLGPTLFLLGGNSQFVHPSHHPEIMRLFPRAQMQTVPNAGHWIHA 293
Query: 949 DSPQDFMAAIRSFL 990
D PQDF+AAIR FL
Sbjct: 294 DRPQDFIAAIRGFL 307
>ref|NP_001138836.1| abhydrolase domain-containing protein 11 isoform 8 [Homo sapiens].
Length = 258
Score = 218 bits (556), Expect = 6e-57
Identities = 111/170 (65%), Positives = 128/170 (75%), Gaps = 3/170 (1%)
Frame = +1
Query: 58 VRARSPIPGMLRCARAWRLPHRGIGPSSPSFSRVPVALSSS---QGGTEPRPVPLSYKLL 228
+RA + MLR RAWRLP G+GP PSF+RVPVA SSS +GG EPRP+PLSY+LL
Sbjct: 1 MRAGQQLASMLRWTRAWRLPREGLGPHGPSFARVPVAPSSSSGGRGGAEPRPLPLSYRLL 60
Query: 229 DGEVARPPLVFLHGLFGSKANFSSIAKALAQQTGRRVLTVDARNHGDSPHSPDMSYEAMS 408
DGE A P +VFLHGLFGSK NF+SIAK LAQQTGRRVLTVDARNHGDSPHSPDMSYE MS
Sbjct: 61 DGEAALPAVVFLHGLFGSKTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDMSYEIMS 120
Query: 409 XXXXXXXXXXXXVPCVLIGHSMGGKTAMLLALQRPELVERLIVVDISPVE 558
VPCV++GHSMGGKTAMLLALQR V + ++ ++ V+
Sbjct: 121 QDLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRDMAVRQHLLTNLVEVD 170
Score = 174 bits (440), Expect = 2e-43
Identities = 83/109 (76%), Positives = 94/109 (86%)
Frame = +1
Query: 664 LSSVVQSISVRQFLLTNLVEVDGHFVWRVNLDALSQHWDKILNFPPRQESYSGPALFLIG 843
L ++ + ++VRQ LLTNLVEVDG FVWRVNLDAL+QH DKIL FP RQESY GP LFL+G
Sbjct: 149 LLALQRDMAVRQHLLTNLVEVDGRFVWRVNLDALTQHLDKILAFPQRQESYLGPTLFLLG 208
Query: 844 GNSQFVLPSHHPEIRRLFPRAQMQTLPNAGHLVHSDSPQDFMAAIRSFL 990
GNSQFV PSHHPEI RLFPRAQMQT+PNAGH +H+D PQDF+AAIR FL
Sbjct: 209 GNSQFVHPSHHPEIMRLFPRAQMQTVPNAGHWIHADRPQDFIAAIRGFL 257
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 49,567,757
Number of extensions: 1405986
Number of successful extensions: 5160
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 5150
Number of HSP's successfully gapped: 4
Length of query: 385
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 281
Effective length of database: 14,868,908
Effective search space: 4178163148
Effective search space used: 4178163148
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008348
(1157 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr03 398 e-108
>Sscrofa_Chr03
|| Length = 144787322
Score = 398 bits (201), Expect = e-108
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 1 cggaactgggcgggggcccgcctaaagacgcaaggcgtggctagcgaacagcacgaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10699931 cggaactgggcgggggcccgcctaaagacgcaaggcgtggctagcgaacagcacgaggtt 10699872
Query: 61 cgcgccaggtctccgatcccggggatgctccgctgcgcccgcgcctggaggctcccccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10699871 cgcgccaggtctccgatcccggggatgctccgctgcgcccgcgcctggaggctcccccat 10699812
Query: 121 agggggatcggcccctccagtcccagcttctccagagtgcctgttgcactcagcagcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10699811 agggggatcggcccctccagtcccagcttctccagagtgcctgttgcactcagcagcagc 10699752
Query: 181 caaggcggcacagagccgagg 201
|||||||||||||||||||||
Sbjct: 10699751 caaggcggcacagagccgagg 10699731
Score = 367 bits (185), Expect = 9e-99
Identities = 185/185 (100%)
Strand = Plus / Minus
Query: 679 cagagcataagcgtacggcagttccttcttaccaacctggtggaggtggatgggcacttc 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10697876 cagagcataagcgtacggcagttccttcttaccaacctggtggaggtggatgggcacttc 10697817
Query: 739 gtgtggagagtgaacttggacgctttgtcccagcactgggacaaaatcttgaacttccca 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10697816 gtgtggagagtgaacttggacgctttgtcccagcactgggacaaaatcttgaacttccca 10697757
Query: 799 ccacggcaagaatcctactctggaccagccctcttcctcattggtggaaactctcaattc 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10697756 ccacggcaagaatcctactctggaccagccctcttcctcattggtggaaactctcaattc 10697697
Query: 859 gtgct 863
|||||
Sbjct: 10697696 gtgct 10697692
Score = 347 bits (175), Expect = 8e-93
Identities = 175/175 (100%)
Strand = Plus / Minus
Query: 336 ggtgctgacagtggatgctcgaaaccatggcgacagcccccacagcccagacatgagcta 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10698762 ggtgctgacagtggatgctcgaaaccatggcgacagcccccacagcccagacatgagcta 10698703
Query: 396 cgaggccatgagccaggatctgcaggacctcctgccccagctgggcctagtgccctgcgt 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10698702 cgaggccatgagccaggatctgcaggacctcctgccccagctgggcctagtgccctgcgt 10698643
Query: 456 cctcattggccacagcatgggaggcaagacagccatgctgctggcacttcaaagg 510
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10698642 cctcattggccacagcatgggaggcaagacagccatgctgctggcacttcaaagg 10698588
Score = 325 bits (164), Expect = 3e-86
Identities = 170/172 (98%)
Strand = Plus / Minus
Query: 510 gccagagctggtggagcgcctgattgtcgtggacattagcccagtggagagcacatccag 569
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 10698154 gccagagctggtggagcgcctgattgccgtggacattagcccagtggagagcacatccag 10698095
Query: 570 ctcgaactttccgaactacgtagcagccatgaaggccatagacctcccgaatggggcatc 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10698094 ctcgaactttccgaactacgtagcagccatgaaggccatagacctcccgaatggggcatc 10698035
Query: 630 cctctccagtgcccggaaactggccagtgagaagctcagctctgtcgtccag 681
|||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 10698034 cctctccagtgcccggaaactggccagtgagaagctcagctctgtcatccag 10697983
Score = 309 bits (156), Expect = 2e-81
Identities = 188/195 (96%), Gaps = 3/195 (1%)
Strand = Plus / Minus
Query: 864 tcccagccaccaccctgagattaggcggctcttccctcgggctcagatgcagaccttgcc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10697454 tcccagccaccaccctgagattaggcggctcttccctcgggctcagatgcagaccttgcc 10697395
Query: 924 taatgctggccacttggttcacagcgacagcccgcaagacttcatggctgccatccgaag 983
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10697394 taatgctggccacttggtccacagcgacagcccgcaagacttcatggctgccatccgaag 10697335
Query: 984 cttcctggnctaaaag-tgccggccagaggggacatgaaa-cccaaacttcaggcccccg 1041
|||||||| ||||||| ||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 10697334 cttcctggcctaaaagttgccggccagaggggacatgaaaccccaaacttcaaggccccg 10697275
Query: 1042 ca-gctgctccttgt 1055
|| ||||||||||||
Sbjct: 10697274 caggctgctccttgt 10697260
Score = 278 bits (140), Expect = 6e-72
Identities = 140/140 (100%)
Strand = Plus / Minus
Query: 199 aggccggtgccgctttcctacaagcttttggacggggaggtagcccgcccgcccctcgtc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10699566 aggccggtgccgctttcctacaagcttttggacggggaggtagcccgcccgcccctcgtc 10699507
Query: 259 tttttgcatgggctctttggaagcaaagccaacttcagctccatcgccaaggccctagcc 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10699506 tttttgcatgggctctttggaagcaaagccaacttcagctccatcgccaaggccctagcc 10699447
Query: 319 cagcagactggcaggagggt 338
||||||||||||||||||||
Sbjct: 10699446 cagcagactggcaggagggt 10699427
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,107,313
Number of extensions: 140
Number of successful extensions: 140
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 139
Number of HSP's successfully gapped: 6
Length of query: 1157
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1136
Effective length of database: 2,808,413,156
Effective search space: 3190357345216
Effective search space used: 3190357345216
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)