Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008456
(993 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001015570.1| galectin-9 isoform 2 [Bos taurus]. 509 e-144
Alignment gi|NP_001034266.1| galectin-9 isoform 1 [Bos taurus]. 492 e-139
Alignment gi|NP_001029940.1| galectin-4 [Bos taurus]. 218 7e-57
Alignment gi|XP_002695709.1| PREDICTED: galectin-14-like [Bos taurus]. 200 1e-51
Alignment gi|XP_001788803.1| PREDICTED: galectin-14-like [Bos taurus]. 200 1e-51
Alignment gi|NP_001039419.1| galectin-8 [Bos taurus]. 182 4e-46
Alignment gi|XP_002699418.1| PREDICTED: lectin, galactoside-binding, solu... 132 4e-31
Alignment gi|XP_597134.2| PREDICTED: lectin, galactoside-binding, soluble... 132 4e-31
Alignment gi|NP_001095811.1| galectin-3 [Bos taurus]. 103 2e-22
Alignment gi|NP_001192760.1| lectin, galactoside-binding-like [Bos taurus]. 82 7e-16
>ref|NP_001015570.1| galectin-9 isoform 2 [Bos taurus].
Length = 323
Score = 509 bits (1310), Expect = e-144
Identities = 240/307 (78%), Positives = 262/307 (85%)
Frame = +1
Query: 73 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 252
F GAQA Y+NP+VPFTGMIQGGLQDG +ITI G VL S G+RF VNLQTG++D+DIAFHF
Sbjct: 3 FGGAQASYINPVVPFTGMIQGGLQDGHKITIIGAVLPSGGNRFAVNLQTGYNDSDIAFHF 62
Query: 253 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
NPRFEEGGYVVCNTKQ G WG EERKM MPFQRG FEL F VQSS+F+V VNG LF QY
Sbjct: 63 NPRFEEGGYVVCNTKQRGSWGTEERKMHMPFQRGCSFELCFQVQSSEFRVMVNGNLFTQY 122
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
HRVPFHR+D IS+TG+VQLS ISFQPPG WPANSAPI QT +HT+ S PGQMFPNP+IP
Sbjct: 123 AHRVPFHRIDAISITGVVQLSSISFQPPGIWPANSAPIAQTFVHTIHSAPGQMFPNPVIP 182
Query: 613 PMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
P YPNPV +PFF SI GGLYPSKSI+VSGTILPSAQ FYINLRSGSDIAFHLNPRF E
Sbjct: 183 PAVYPNPVYQLPFFTSILGGLYPSKSILVSGTILPSAQRFYINLRSGSDIAFHLNPRFNE 242
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLK 972
NAVVRNTQI SWG EER LPR MPF RGQSF VWI+CE HCF+VAVD QHLFEY+HRLK
Sbjct: 243 NAVVRNTQINGSWGSEERSLPRGMPFFRGQSFSVWIMCEGHCFKVAVDSQHLFEYHHRLK 302
Query: 973 HLPTINS 993
+LP IN+
Sbjct: 303 NLPAINN 309
>ref|NP_001034266.1| galectin-9 isoform 1 [Bos taurus].
Length = 355
Score = 492 bits (1267), Expect = e-139
Identities = 240/339 (70%), Positives = 262/339 (77%), Gaps = 32/339 (9%)
Frame = +1
Query: 73 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 252
F GAQA Y+NP+VPFTGMIQGGLQDG +ITI G VL S G+RF VNLQTG++D+DIAFHF
Sbjct: 3 FGGAQASYINPVVPFTGMIQGGLQDGHKITIIGAVLPSGGNRFAVNLQTGYNDSDIAFHF 62
Query: 253 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
NPRFEEGGYVVCNTKQ G WG EERKM MPFQRG FEL F VQSS+F+V VNG LF QY
Sbjct: 63 NPRFEEGGYVVCNTKQRGSWGTEERKMHMPFQRGCSFELCFQVQSSEFRVMVNGNLFTQY 122
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQ--------------------------------PP 516
HRVPFHR+D IS+TG+VQLS ISFQ PP
Sbjct: 123 AHRVPFHRIDAISITGVVQLSSISFQNIRAAPKQPACSKVQFSQAVCLPPRPRGRKSNPP 182
Query: 517 GRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIM 696
G WPANSAPI QT +HT+ S PGQMFPNP+IPP YPNPV +PFF SI GGLYPSKSI+
Sbjct: 183 GIWPANSAPIAQTFVHTIHSAPGQMFPNPVIPPAVYPNPVYQLPFFTSILGGLYPSKSIL 242
Query: 697 VSGTILPSAQSFYINLRSGSDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSR 876
VSGTILPSAQ FYINLRSGSDIAFHLNPRF ENAVVRNTQI SWG EER LPR MPF R
Sbjct: 243 VSGTILPSAQRFYINLRSGSDIAFHLNPRFNENAVVRNTQINGSWGSEERSLPRGMPFFR 302
Query: 877 GQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
GQSF VWI+CE HCF+VAVD QHLFEY+HRLK+LP IN+
Sbjct: 303 GQSFSVWIMCEGHCFKVAVDSQHLFEYHHRLKNLPAINN 341
>ref|NP_001029940.1| galectin-4 [Bos taurus].
Length = 332
Score = 218 bits (555), Expect = 7e-57
Identities = 128/306 (41%), Positives = 176/306 (57%), Gaps = 13/306 (4%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN-DIAFHFNPRFE 267
P NP +P+ I GGL+ G+ + I G V RF VN + G D+AFHFNPRF+
Sbjct: 11 PTYNPTLPYHNPIPGGLRVGMSVYIQG-VASEHMKRFFVNFEVGQGQGADVAFHFNPRFD 69
Query: 268 EGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
VV N+KQNG WG EERKM MPF++G FEL F+V + F+V VNG F ++ HR+P
Sbjct: 70 GWDKVVLNSKQNGSWGQEERKMSMPFRKGAAFELVFMVMTEHFKVVVNGTPFHEFKHRIP 129
Query: 448 FHRVDTISVTGIVQLSYISF---QPPGR---WPANSAPITQTVIHTVQSTPGQMF-PNPM 606
V + V G + L I+F QPP PA + P+ + +PGQ +
Sbjct: 130 LQMVTHLHVDGDLMLQSINFIGGQPPSNQMPMPAQAYPMPMSA--QAYPSPGQYYQQQSR 187
Query: 607 IPPMAYP---NPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS--DIAFH 771
+P M P NP P+PF + GGL ++I++ G I P+A+SF IN + GS D+A H
Sbjct: 188 LPTMEGPPAFNP--PVPFNGRLQGGLIVRRTIIIKGYIPPTAKSFVINFKVGSSGDVALH 245
Query: 772 LNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLF 951
+NPR E AVVRN+ + SWG EER + PF GQ F + + C + F+V +G+HLF
Sbjct: 246 INPRMTEGAVVRNSFLNGSWGSEERKVSYN-PFGPGQFFDLSVRCGADRFKVYANGKHLF 304
Query: 952 EYYHRL 969
++ HRL
Sbjct: 305 DFSHRL 310
Score = 96.3 bits (238), Expect = 4e-20
Identities = 59/139 (42%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEE 270
P NP VPF G +QGGL I I G + ++ S F +N + G S D+A H NPR E
Sbjct: 195 PAFNPPVPFNGRLQGGLIVRRTIIIKGYIPPTAKS-FVINFKVG-SSGDVALHINPRMTE 252
Query: 271 GGYVVCNTKQNGIWGPEERKMQM-PFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
G VV N+ NG WG EERK+ PF G F+LS + +F+V NG+ ++HR+
Sbjct: 253 GA-VVRNSFLNGSWGSEERKVSYNPFGPGQFFDLSVRCGADRFKVYANGKHLFDFSHRLS 311
Query: 448 -FHRVDTISVTGIVQLSYI 501
F RVD + + G V LSY+
Sbjct: 312 AFQRVDLVEIHGDVTLSYV 330
>ref|XP_002695709.1| PREDICTED: galectin-14-like [Bos taurus].
Length = 516
Score = 200 bits (509), Expect = 1e-51
Identities = 123/267 (46%), Positives = 152/267 (56%), Gaps = 17/267 (6%)
Frame = +1
Query: 109 VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEEGGYVVC 288
VPFTGMI+GGLQDG +IT+ G VL + SRF+VN Q H+D++IAFHFNPRFEEG YVVC
Sbjct: 59 VPFTGMIEGGLQDGHKITVMGRVLSTGESRFSVNFQMDHTDHEIAFHFNPRFEEGRYVVC 118
Query: 289 NTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPFHRVDTI 468
NTKQ G WGPEERKMQMPFQ+G FE+ F V+SS F+V VN +F+ Y HRVPF++++ I
Sbjct: 119 NTKQLGKWGPEERKMQMPFQKGSLFEICFEVESSAFKVMVNKNIFLYYVHRVPFYQLNAI 178
Query: 469 SVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP-PMAYPNPVLPI 645
SV G V LSYISFQ H V TP +P P + P
Sbjct: 179 SVKGGVHLSYISFQ---------VAEVSCASHWVLETPPYGLYSPKNPLAFGFGGPSAAH 229
Query: 646 PFFASIPGGLYPSKSIMVSGTILPSAQSF------------YINLRSGSDIAFHLNPRFK 789
P + P + + + SG +L Q F + S SDIAFH +PR +
Sbjct: 230 PGWTPGPCVEHTAGYRLTSGHMLVLVQGFLGTGPHGRFAANFQTRCSDSDIAFHFSPRLE 289
Query: 790 ENA-VVRNTQIGSSWGPEE---RGLPR 858
A VV N + SW R LPR
Sbjct: 290 NTAYVVCNGKQKRSWSLRSGRCRRLPR 316
Score = 147 bits (371), Expect = 1e-35
Identities = 97/235 (41%), Positives = 127/235 (54%), Gaps = 4/235 (1%)
Frame = +1
Query: 184 SSGSRFTVNLQTGHSD-NDIAFHFNPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHP 360
+ SRF VN Q SD N+IAFHFNPRFE+ GYVVCNT+QN WGPEERKMQM FQRG
Sbjct: 329 AQSSRFEVNFQIAFSDINNIAFHFNPRFEDNGYVVCNTRQNRSWGPEERKMQMSFQRGIH 388
Query: 361 FELSFLVQSSQFQVTVNGRLFVQYTHRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSA 540
FEL F V+ S F+V VNG LF QY H +P H V+TI+V G+V +S ISFQ P + P
Sbjct: 389 FELCFQVE-SWFKVMVNGNLFTQYAHCMPLHSVNTITVAGLVNVSKISFQDPVQLP---- 443
Query: 541 PITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPS 720
V+++P + G P KS++ T P+
Sbjct: 444 --------NVRTSP-----------------------TTNRSEGAVPQKSLL--WTSKPT 470
Query: 721 AQSFYINLRSGSDIAFHLNPRFKENA---VVRNTQIGSSWGPEERGLPRKMPFSR 876
+DIAF+ +F++++ V+ NT+ WG EE+ +MPF R
Sbjct: 471 GD---------NDIAFYFCAQFEDDSSDYVICNTRQEGKWGTEEKIC--EMPFQR 514
Score = 76.3 bits (186), Expect = 4e-14
Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Frame = +1
Query: 550 QTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQS 729
QT+ + T Q + + + P+PF I GGL I V G +L + +S
Sbjct: 28 QTIPGATKDTSAQGYGAKEAGQLTTVSSPQPVPFTGMIEGGLQDGHKITVMGRVLSTGES 87
Query: 730 -FYINLR---SGSDIAFHLNPRFKENA-VVRNTQIGSSWGPEERGLPRKMPFSRGQSFLV 894
F +N + + +IAFH NPRF+E VV NT+ WGPEER + +MPF +G F +
Sbjct: 88 RFSVNFQMDHTDHEIAFHFNPRFEEGRYVVCNTKQLGKWGPEERKM--QMPFQKGSLFEI 145
Query: 895 WILCESHCFQVAVDGQHLFEYYHRL 969
ES F+V V+ Y HR+
Sbjct: 146 CFEVESSAFKVMVNKNIFLYYVHRV 170
Score = 56.6 bits (135), Expect = 3e-08
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 727 SFYINLRSGSDIAFHLNPRFKENA-VVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWIL 903
+F I ++IAFH NPRF++N VV NT+ SWGPEER + +M F RG F +
Sbjct: 337 NFQIAFSDINNIAFHFNPRFEDNGYVVCNTRQNRSWGPEERKM--QMSFQRGIHFELCFQ 394
Query: 904 CESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
ES F+V V+G +LF Y L ++N+
Sbjct: 395 VES-WFKVMVNG-NLFTQYAHCMPLHSVNT 422
>ref|XP_001788803.1| PREDICTED: galectin-14-like [Bos taurus].
Length = 516
Score = 200 bits (509), Expect = 1e-51
Identities = 123/267 (46%), Positives = 152/267 (56%), Gaps = 17/267 (6%)
Frame = +1
Query: 109 VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEEGGYVVC 288
VPFTGMI+GGLQDG +IT+ G VL + SRF+VN Q H+D++IAFHFNPRFEEG YVVC
Sbjct: 59 VPFTGMIEGGLQDGHKITVMGRVLSTGESRFSVNFQMDHTDHEIAFHFNPRFEEGRYVVC 118
Query: 289 NTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPFHRVDTI 468
NTKQ G WGPEERKMQMPFQ+G FE+ F V+SS F+V VN +F+ Y HRVPF++++ I
Sbjct: 119 NTKQLGKWGPEERKMQMPFQKGSLFEICFEVESSAFKVMVNKNIFLYYVHRVPFYQLNAI 178
Query: 469 SVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP-PMAYPNPVLPI 645
SV G V LSYISFQ H V TP +P P + P
Sbjct: 179 SVKGGVHLSYISFQ---------VAEVSCASHWVLETPPYGLYSPKNPLAFGFGGPSAAH 229
Query: 646 PFFASIPGGLYPSKSIMVSGTILPSAQSF------------YINLRSGSDIAFHLNPRFK 789
P + P + + + SG +L Q F + S SDIAFH +PR +
Sbjct: 230 PGWTPGPCVEHTAGYRLTSGHMLVLVQGFLGTGPHGRFAANFQTRCSDSDIAFHFSPRLE 289
Query: 790 ENA-VVRNTQIGSSWGPEE---RGLPR 858
A VV N + SW R LPR
Sbjct: 290 NTAYVVCNGKQKRSWSLRSGRCRRLPR 316
Score = 147 bits (371), Expect = 1e-35
Identities = 97/235 (41%), Positives = 127/235 (54%), Gaps = 4/235 (1%)
Frame = +1
Query: 184 SSGSRFTVNLQTGHSD-NDIAFHFNPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHP 360
+ SRF VN Q SD N+IAFHFNPRFE+ GYVVCNT+QN WGPEERKMQM FQRG
Sbjct: 329 AQSSRFEVNFQIAFSDINNIAFHFNPRFEDNGYVVCNTRQNRSWGPEERKMQMSFQRGIH 388
Query: 361 FELSFLVQSSQFQVTVNGRLFVQYTHRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSA 540
FEL F V+ S F+V VNG LF QY H +P H V+TI+V G+V +S ISFQ P + P
Sbjct: 389 FELCFQVE-SWFKVMVNGNLFTQYAHCMPLHSVNTITVAGLVNVSKISFQDPVQLP---- 443
Query: 541 PITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPS 720
V+++P + G P KS++ T P+
Sbjct: 444 --------NVRTSP-----------------------TTNRSEGAVPQKSLL--WTSKPT 470
Query: 721 AQSFYINLRSGSDIAFHLNPRFKENA---VVRNTQIGSSWGPEERGLPRKMPFSR 876
+DIAF+ +F++++ V+ NT+ WG EE+ +MPF R
Sbjct: 471 GD---------NDIAFYFCAQFEDDSSDYVICNTRQEGKWGTEEKIC--EMPFQR 514
Score = 76.3 bits (186), Expect = 4e-14
Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Frame = +1
Query: 550 QTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQS 729
QT+ + T Q + + + P+PF I GGL I V G +L + +S
Sbjct: 28 QTIPGATKDTSAQGYGAKEAGQLTTVSSPQPVPFTGMIEGGLQDGHKITVMGRVLSTGES 87
Query: 730 -FYINLR---SGSDIAFHLNPRFKENA-VVRNTQIGSSWGPEERGLPRKMPFSRGQSFLV 894
F +N + + +IAFH NPRF+E VV NT+ WGPEER + +MPF +G F +
Sbjct: 88 RFSVNFQMDHTDHEIAFHFNPRFEEGRYVVCNTKQLGKWGPEERKM--QMPFQKGSLFEI 145
Query: 895 WILCESHCFQVAVDGQHLFEYYHRL 969
ES F+V V+ Y HR+
Sbjct: 146 CFEVESSAFKVMVNKNIFLYYVHRV 170
Score = 56.6 bits (135), Expect = 3e-08
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 727 SFYINLRSGSDIAFHLNPRFKENA-VVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWIL 903
+F I ++IAFH NPRF++N VV NT+ SWGPEER + +M F RG F +
Sbjct: 337 NFQIAFSDINNIAFHFNPRFEDNGYVVCNTRQNRSWGPEERKM--QMSFQRGIHFELCFQ 394
Query: 904 CESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
ES F+V V+G +LF Y L ++N+
Sbjct: 395 VES-WFKVMVNG-NLFTQYAHCMPLHSVNT 422
>ref|NP_001039419.1| galectin-8 [Bos taurus].
Length = 357
Score = 182 bits (462), Expect = 4e-46
Identities = 118/333 (35%), Positives = 171/333 (51%), Gaps = 35/333 (10%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++P+ G I L+ G I + G V S RF V+LQ G S D+AFHFNPRF+
Sbjct: 13 NPVIPYVGTISEQLEPGTLIVLRGHV-PSDSDRFQVDLQCGSSVKPRADVAFHFNPRFKR 71
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
VVCNT +N WG EE MPF++ FE+ +V +FQV VNGR + Y HR+
Sbjct: 72 ANCVVCNTLRNEKWGWEEITYDMPFKKEKSFEIVIMVLKEKFQVAVNGRHTLLYAHRISP 131
Query: 451 HRVDTISVTGIVQLSYISF--------------QPPG------------RWPANSAPITQ 552
R+DT+ + G V + + F +P G + P+N I++
Sbjct: 132 ERIDTLGIYGKVIIHSVGFSFSSDLGSTQGSTLEPTGISKENVQKSGESQLPSNRGDISK 191
Query: 553 TVIHTVQSTPGQMFP--NPMIPPMAYPNPVL--PIPFFASIPGGLYPSKSIMVSGTILPS 720
V TV T + P + + P L +PF A + + P ++I++ G + +
Sbjct: 192 IVPRTVY-TKSKASPANHTLTCAKILPTNCLSKTLPFVARLNSSMGPGRTIVIKGEVNTN 250
Query: 721 AQSFYINLRSG--SDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLV 894
A+ F ++L SG DIA HLNPR A VRN+ + +WG EER + PFS G F +
Sbjct: 251 AKGFTVDLLSGKSKDIALHLNPRLNVKAFVRNSFLQEAWGEEERNI-TCFPFSPGMYFEM 309
Query: 895 WILCESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
I C++ F+VAV+G H EY HR K L +++
Sbjct: 310 IIYCDAREFKVAVNGVHSLEYKHRFKELSKVDT 342
>ref|XP_002699418.1| PREDICTED: lectin, galactoside-binding, soluble, 12-like [Bos
taurus].
Length = 314
Score = 132 bits (333), Expect = 4e-31
Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Frame = +1
Query: 85 QAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTG---HSDNDIAFHFN 255
Q P P++PF I GGL+ G + + G V +++ RF V+ Q G H DIA HFN
Sbjct: 17 QPPVFQPVIPFVTTIFGGLRAGKMVMLQGAVPLNA-HRFQVDFQCGCSLHPRPDIAIHFN 75
Query: 256 PRFEEGG-YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
PRF +V+CN+ G W E R + QRG F + FL + + +V+VNG+ F+ Y
Sbjct: 76 PRFHTTKPHVICNSLYRGRWQVEARWPHVALQRGASFLILFLFGNEEMKVSVNGQHFLHY 135
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
+R+P RVDT+ + G + ++ + F N P + G + P+
Sbjct: 136 RYRLPLSRVDTLGIFGDISVTAVGF-------LNINPFVE---------GGSEY--PVGH 177
Query: 613 PMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
P +P L +P F ++P GL+P + I+V G +LP + F ++LR D A H+ +
Sbjct: 178 PFLLRSPGLEVPCFHALPRGLWPGQVIIVRGLVLPEPKDFTLSLR---DEAAHVPVTLRA 234
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQ 942
+ R S WG ++ L + F + F V +LC+ ++A++GQ
Sbjct: 235 SFADRTLAWVSRWGRKKLILAPFL-FYPQRFFEVLLLCQEGGLKLALNGQ 283
Score = 62.4 bits (150), Expect = 6e-10
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Frame = +1
Query: 610 PPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS------DIAFH 771
PP+ P IPF +I GGL K +M+ G + +A F ++ + G DIA H
Sbjct: 18 PPVFQP----VIPFVTTIFGGLRAGKMVMLQGAVPLNAHRFQVDFQCGCSLHPRPDIAIH 73
Query: 772 LNPRFKENA--VVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQH 945
NPRF V+ N+ W E R + RG SFL+ L + +V+V+GQH
Sbjct: 74 FNPRFHTTKPHVICNSLYRGRWQVEARW--PHVALQRGASFLILFLFGNEEMKVSVNGQH 131
Query: 946 LFEYYHRL 969
Y +RL
Sbjct: 132 FLHYRYRL 139
>ref|XP_597134.2| PREDICTED: lectin, galactoside-binding, soluble, 12-like [Bos
taurus].
Length = 314
Score = 132 bits (333), Expect = 4e-31
Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Frame = +1
Query: 85 QAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTG---HSDNDIAFHFN 255
Q P P++PF I GGL+ G + + G V +++ RF V+ Q G H DIA HFN
Sbjct: 17 QPPVFQPVIPFVTTIFGGLRAGKMVMLQGAVPLNA-HRFQVDFQCGCSLHPRPDIAIHFN 75
Query: 256 PRFEEGG-YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
PRF +V+CN+ G W E R + QRG F + FL + + +V+VNG+ F+ Y
Sbjct: 76 PRFHTTKPHVICNSLYRGRWQVEARWPHVALQRGASFLILFLFGNEEMKVSVNGQHFLHY 135
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
+R+P RVDT+ + G + ++ + F N P + G + P+
Sbjct: 136 RYRLPLSRVDTLGIFGDISVTAVGF-------LNINPFVE---------GGSEY--PVGH 177
Query: 613 PMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
P +P L +P F ++P GL+P + I+V G +LP + F ++LR D A H+ +
Sbjct: 178 PFLLRSPGLEVPCFHALPRGLWPGQVIIVRGLVLPEPKDFTLSLR---DEAAHVPVTLRA 234
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQ 942
+ R S WG ++ L + F + F V +LC+ ++A++GQ
Sbjct: 235 SFADRTLAWVSRWGRKKLILAPFL-FYPQRFFEVLLLCQEGGLKLALNGQ 283
Score = 62.4 bits (150), Expect = 6e-10
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Frame = +1
Query: 610 PPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS------DIAFH 771
PP+ P IPF +I GGL K +M+ G + +A F ++ + G DIA H
Sbjct: 18 PPVFQP----VIPFVTTIFGGLRAGKMVMLQGAVPLNAHRFQVDFQCGCSLHPRPDIAIH 73
Query: 772 LNPRFKENA--VVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQH 945
NPRF V+ N+ W E R + RG SFL+ L + +V+V+GQH
Sbjct: 74 FNPRFHTTKPHVICNSLYRGRWQVEARW--PHVALQRGASFLILFLFGNEEMKVSVNGQH 131
Query: 946 LFEYYHRL 969
Y +RL
Sbjct: 132 FLHYRYRL 139
>ref|NP_001095811.1| galectin-3 [Bos taurus].
Length = 265
Score = 103 bits (257), Expect = 2e-22
Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Frame = +1
Query: 511 PPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLP---------------- 642
PPG +P +AP + PG P+ P AYP P P
Sbjct: 77 PPGAYPGPTAP----------AYPGPTAPSAYPGPGAYPPPAQPSAPGAYPAAGPYGIPS 126
Query: 643 ----IPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKEN---AV 801
+P+ PGG+ P I + GT+ P+A ++ + G+D+AFH NPRF E+ +
Sbjct: 127 GPLNVPYDLPFPGGIRPRMLITILGTVKPNANRLALDFKRGNDVAFHFNPRFNEDNRRVI 186
Query: 802 VRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLP 981
V N+++ ++WG EER + PF G+ F + +L E F+VAV+ HL +Y HR+K+
Sbjct: 187 VCNSKLNNNWGKEERQM--VFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKNFG 244
Query: 982 TINS 993
I++
Sbjct: 245 EIST 248
Score = 102 bits (254), Expect = 5e-22
Identities = 59/148 (39%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
Frame = +1
Query: 82 AQAPYMNPM----VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFH 249
A PY P VP+ GG++ + ITI GTV + +R ++ + G ND+AFH
Sbjct: 118 AAGPYGIPSGPLNVPYDLPFPGGIRPRMLITILGTV-KPNANRLALDFKRG---NDVAFH 173
Query: 250 FNPRFEEGG--YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLF 423
FNPRF E +VCN+K N WG EER+M PF+ G PF++ LV+ F+V VN
Sbjct: 174 FNPRFNEDNRRVIVCNSKLNNNWGKEERQMVFPFESGKPFKIQVLVEPDHFKVAVNDAHL 233
Query: 424 VQYTHRVP-FHRVDTISVTGIVQLSYIS 504
+QY HRV F + T+ ++G + L+ S
Sbjct: 234 LQYNHRVKNFGEISTLGISGDITLTSAS 261
>ref|NP_001192760.1| lectin, galactoside-binding-like [Bos taurus].
Length = 172
Score = 82.0 bits (201), Expect = 7e-16
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Frame = +1
Query: 631 PVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSG------SDIAFHLNPRFKE 792
P L +PF I GG+ P K ++V G + + +SF I+L G +D+A L F +
Sbjct: 34 PRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTD 93
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLK 972
++RN+ I G E+ +P PF Q F V ILCE F+V VDG LF++YHR++
Sbjct: 94 RQLLRNSCISGERGEEQSAIPY-FPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQ 152
Query: 973 HLPTINS 993
L I++
Sbjct: 153 TLSAIDT 159
Score = 55.5 bits (132), Expect = 7e-08
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Frame = +1
Query: 106 MVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEEGG 276
+VPF G I+GG++ G ++ + G V ++ S F ++L G S++ D+A F +
Sbjct: 37 IVPFCGHIKGGMRPGKKVLVMGIVDLNPES-FAISLTCGDSEDPPADVAIELKAVFTDR- 94
Query: 277 YVVCNTKQNGIWGPEERKMQ-MPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRV-PF 450
++ N+ +G G E+ + PF PF + L + +F+V V+G + HR+
Sbjct: 95 QLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTL 154
Query: 451 HRVDTISVTGIVQLS 495
+DTI + G +Q++
Sbjct: 155 SAIDTIKINGDLQIT 169
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,036,432
Number of extensions: 1340258
Number of successful extensions: 6466
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 6306
Number of HSP's successfully gapped: 40
Length of query: 331
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 228
Effective length of database: 14,273,310
Effective search space: 3254314680
Effective search space used: 3254314680
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008456
(993 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003345.1| galectin-9 [Canis lupus familiaris]. 497 e-141
Alignment gi|XP_855387.1| PREDICTED: similar to Galectin-4 (Lactose-bindi... 189 4e-48
Alignment gi|XP_536335.2| PREDICTED: similar to galectin 8 isoform a [Can... 178 8e-45
Alignment gi|XP_540894.2| PREDICTED: similar to lectin, galactoside-bindi... 127 2e-29
Alignment gi|NP_001183972.1| galectin-3 [Canis lupus familiaris]. 108 6e-24
Alignment gi|XP_538509.2| PREDICTED: similar to Galectin-5 (RL-18) [Canis... 82 8e-16
Alignment gi|XP_547010.2| PREDICTED: similar to galectin-related inter-fi... 61 1e-09
Alignment gi|NP_001188417.1| galectin-1 [Canis lupus familiaris]. 56 6e-08
Alignment gi|XP_861690.1| PREDICTED: similar to lectin, galactoside-bindi... 55 8e-08
Alignment gi|XP_531742.1| PREDICTED: similar to lectin, galactoside-bindi... 55 8e-08
>ref|NP_001003345.1| galectin-9 [Canis lupus familiaris].
Length = 323
Score = 497 bits (1280), Expect = e-141
Identities = 230/307 (74%), Positives = 263/307 (85%)
Frame = +1
Query: 73 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 252
FS +Q PY++P VPF+G IQGGLQDGL+ITINGT+L +G+RF VN +GHSD+DIAFHF
Sbjct: 3 FSSSQPPYLSPGVPFSGKIQGGLQDGLKITINGTILYCNGTRFAVNFHSGHSDSDIAFHF 62
Query: 253 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
NPRFEEGGYVVCNTKQ G WG EERKMQMPFQ G+PFEL F+V S F+VTVNG F QY
Sbjct: 63 NPRFEEGGYVVCNTKQKGSWGSEERKMQMPFQMGNPFELCFMVNSCDFKVTVNGSHFTQY 122
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
+HRVPFH VDT+S+TG VQLSYISFQ PG W ++SAPITQTVIHTVQ+TPGQ FPNP+IP
Sbjct: 123 SHRVPFHYVDTLSITGAVQLSYISFQSPGVWQSSSAPITQTVIHTVQTTPGQPFPNPIIP 182
Query: 613 PMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
P AYP P P+PFF SIPGGLYPSKSI+VSGT+LP A+ F+INLRSG+DIAFHLNPRF E
Sbjct: 183 PTAYPTPTYPMPFFTSIPGGLYPSKSIIVSGTVLPGAKRFHINLRSGNDIAFHLNPRFNE 242
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLK 972
N VVRN QI +SWG EER LPRKMPF +GQSF VWI+CE HCF+VAVDG+HLFEYYHRLK
Sbjct: 243 NTVVRNMQINNSWGSEERSLPRKMPFVQGQSFSVWIMCEGHCFKVAVDGEHLFEYYHRLK 302
Query: 973 HLPTINS 993
+L IN+
Sbjct: 303 NLLAINN 309
>ref|XP_855387.1| PREDICTED: similar to Galectin-4 (Lactose-binding lectin 4) (L-36
lactose binding protein) (L36LBP) (Antigen NY-CO-27)
[Canis familiaris].
Length = 798
Score = 189 bits (480), Expect = 4e-48
Identities = 116/305 (38%), Positives = 163/305 (53%), Gaps = 5/305 (1%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTG-HSDNDIAFHFNPRFE 267
P NP +P+ I GGL G+ + I G + RF VN G H +DIAFHFNPRF+
Sbjct: 58 PTYNPTLPYNKPIPGGLSVGMSVYIQG-ITSEHMRRFCVNFVAGAHPGSDIAFHFNPRFD 116
Query: 268 EGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
VV N+ G WG EE+K MPF++G FEL F+V + ++V VNG F ++ HR+P
Sbjct: 117 GWDKVVFNSHLGGKWGSEEKKRSMPFRKGTHFELVFMVLAEHYKVVVNGNPFYEFGHRLP 176
Query: 448 FHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYP 627
V + V G V+L I+F G P P ++ PG P P
Sbjct: 177 LQLVTHLQVEGDVELQSINF--IGGTP---IPGPHPLVTLGAPGPGHTQQQPSSLPTMEG 231
Query: 628 NPVL--PIPFFASIPGGLYPSKSIMVSGTILPSAQSFYIN--LRSGSDIAFHLNPRFKEN 795
PV P+PF + GGL +++++ G + +++SF IN + S D+A H+NPR E
Sbjct: 232 PPVFNPPVPFRKRLQGGLTVRRTVIIKGFVPFTSKSFVINFMVESSGDLALHINPRLTEG 291
Query: 796 AVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKH 975
VVRN+ + SWG E+R L PF GQ F + I C F+V +GQHLF++ HRL
Sbjct: 292 LVVRNSCLNGSWGSEDRKLSYN-PFIPGQFFDLSIRCGMDRFKVYANGQHLFDFSHRLLA 350
Query: 976 LPTIN 990
L ++
Sbjct: 351 LQNVD 355
Score = 69.3 bits (168), Expect = 5e-12
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Frame = +1
Query: 109 VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSD-NDIAFHFNPRFEEGGYVV 285
VP + G++ G + I G V +G RF VNL G + ++ A HFNPR +E VV
Sbjct: 645 VPHKTSLPEGIRVGTVMRIRGVVPNKAG-RFYVNLLCGEAPGSEAALHFNPRLDEST-VV 702
Query: 286 CNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQ---------------------V 402
NT + G WG EER +PFQRG PF++ + F+
Sbjct: 703 FNTLEQGAWGREERGTGIPFQRGQPFDVLLIATDEGFKRIRTGVRGQGRGRARSRERGPA 762
Query: 403 TVNGRLFVQYTHRVPFHRVDTISVTGIVQLSYIS 504
V + + +R+P RV + V G +QL +S
Sbjct: 763 VVGDSEYHHFRYRIPPARVRLLEVGGDLQLESVS 796
Score = 63.9 bits (154), Expect = 2e-10
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +1
Query: 595 PNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINL----RSGSDI 762
P+P +P +P S+P G+ + + G + A FY+NL GS+
Sbjct: 629 PSPAVPAPGSWLAGRNVPHKTSLPEGIRVGTVMRIRGVVPNKAGRFYVNLLCGEAPGSEA 688
Query: 763 AFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQ 924
A H NPR E+ VV NT +WG EERG +PF RGQ F V ++ F+
Sbjct: 689 ALHFNPRLDESTVVFNTLEQGAWGREERG--TGIPFQRGQPFDVLLIATDEGFK 740
>ref|XP_536335.2| PREDICTED: similar to galectin 8 isoform a [Canis familiaris].
Length = 357
Score = 178 bits (451), Expect = 8e-45
Identities = 116/334 (34%), Positives = 166/334 (49%), Gaps = 36/334 (10%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++P+ G I G L+ G I I G V S RF V+LQ G S D+AFHFNPRF+
Sbjct: 13 NPVIPYVGTIPGQLEPGTLIVIRGHVPCDS-DRFQVDLQCGSSVKPRADVAFHFNPRFKW 71
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
+VCNT +N WG EE PF++ FE+ +V +FQV VNG+ + Y HR+
Sbjct: 72 SDCIVCNTLKNEKWGWEEITYDTPFKKEKSFEIVIMVLKDKFQVAVNGKHILLYAHRITP 131
Query: 451 HRVDTISVTGIVQLSYISFQ--------------------------PPGRWPANSAPITQ 552
++DT+ + G V + I + +P+N I++
Sbjct: 132 GKIDTLGIYGKVNVHSIGYSFSSDFRSTQASTLELTEISKENVLKPDTPHFPSNRGDISK 191
Query: 553 TVIHTV-----QSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILP 717
V TV ST I P + + L PF A + + P +++++ G +
Sbjct: 192 IVPRTVYTKSKDSTANHTLTCAKILPTSCLSKTL--PFTARLNSSMGPGRTVVIKGEVNK 249
Query: 718 SAQSFYINLRSG--SDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFL 891
+A+ F ++L SG DIA HLNPR A VRN+ + SWG EER + PFS G F
Sbjct: 250 TAKGFNVDLVSGKSKDIALHLNPRLNIKAFVRNSFLHESWGEEERNI-TCFPFSPGMYFE 308
Query: 892 VWILCESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
+ I C+ F+VAV+G H EY HR K L I++
Sbjct: 309 MIIYCDVREFKVAVNGVHSLEYKHRFKELSNIDT 342
>ref|XP_540894.2| PREDICTED: similar to lectin, galactoside-binding, soluble, 12
(galectin 12) [Canis familiaris].
Length = 314
Score = 127 bits (318), Expect = 2e-29
Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 4/292 (1%)
Frame = +1
Query: 85 QAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTG---HSDNDIAFHFN 255
Q P +P+VP+ I GGL+ G + + G V RF V+ Q G H DIA HFN
Sbjct: 17 QPPVFHPVVPYVTTIFGGLRAGKMVMLQGMV-PEDAHRFQVDFQCGCSLHPRPDIAIHFN 75
Query: 256 PRFEEGG-YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
PRF +V+CNT Q+G W E R + QRG F + FL + + +V+VNG+ F+ Y
Sbjct: 76 PRFHTTKPHVICNTLQHGRWQAEARWPHLTLQRGASFLILFLFGNEEMKVSVNGQHFLHY 135
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
+R+P RVDT+ + G + + I F N P + I P+
Sbjct: 136 HYRLPLSRVDTLGIFGNILVEAIGF-------LNINPFAEGGIE-----------YPIGY 177
Query: 613 PMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
P +P L +P ++P GL+P + I++ +L + F ++L SD A H+ +
Sbjct: 178 PFLLKSPSLKVPCSCALPRGLWPGQVIVLRALVLSEPKDFTLSL---SDEAAHVPVTLRA 234
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHL 948
+ R S WG ++ + F + F V +LC+ ++A++GQ L
Sbjct: 235 SFADRTLAWISPWGCKKL-ISAPFIFYPQRFFEVLLLCQEGGLKLALNGQGL 285
Score = 65.1 bits (157), Expect = 1e-10
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +1
Query: 610 PPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS------DIAFH 771
PP+ +P +P+ +I GGL K +M+ G + A F ++ + G DIA H
Sbjct: 18 PPVFHP----VVPYVTTIFGGLRAGKMVMLQGMVPEDAHRFQVDFQCGCSLHPRPDIAIH 73
Query: 772 LNPRFKENA--VVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQH 945
NPRF V+ NT W E R + RG SFL+ L + +V+V+GQH
Sbjct: 74 FNPRFHTTKPHVICNTLQHGRWQAEARW--PHLTLQRGASFLILFLFGNEEMKVSVNGQH 131
Query: 946 LFEYYHRL 969
Y++RL
Sbjct: 132 FLHYHYRL 139
>ref|NP_001183972.1| galectin-3 [Canis lupus familiaris].
Length = 287
Score = 108 bits (271), Expect = 6e-24
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Frame = +1
Query: 511 PPGRWPANSAPITQTVIHTVQST-PGQ-----MFPNPMIP----------PMAYPNPVLP 642
PPG +P +AP T T PGQ +P P P P P L
Sbjct: 95 PPGTYPGPTAPAYPGP--TAPGTQPGQPSGPGAYPPPGQPSAPGAYPAAGPFGIPAGPLT 152
Query: 643 IPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKEN---AVVRNT 813
+P+ +PGG+ P I + GT+ PSA ++ + G+D+AFH NPRF E+ +V NT
Sbjct: 153 VPYDLPLPGGVKPRMLITILGTVRPSANRLALDFKRGNDVAFHFNPRFNEDNKRVIVCNT 212
Query: 814 QIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTIN 990
++ + WG EER PF G+ F + +L ES F+VAV+ HL +Y HR+K+LP I+
Sbjct: 213 KLDNIWGKEER--QAAFPFESGKPFKIQVLVESDHFKVAVNDAHLLQYNHRMKNLPEIS 269
Score = 101 bits (251), Expect = 1e-21
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
Frame = +1
Query: 109 VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEEGG--YV 282
VP+ + GG++ + ITI GTV S +R ++ + G ND+AFHFNPRF E +
Sbjct: 153 VPYDLPLPGGVKPRMLITILGTV-RPSANRLALDFKRG---NDVAFHFNPRFNEDNKRVI 208
Query: 283 VCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP-FHRV 459
VCNTK + IWG EER+ PF+ G PF++ LV+S F+V VN +QY HR+ +
Sbjct: 209 VCNTKLDNIWGKEERQAAFPFESGKPFKIQVLVESDHFKVAVNDAHLLQYNHRMKNLPEI 268
Query: 460 DTISVTGIVQLSYISF 507
+ ++G + L+ S+
Sbjct: 269 SKLGISGDIDLTSASY 284
>ref|XP_538509.2| PREDICTED: similar to Galectin-5 (RL-18) [Canis familiaris].
Length = 173
Score = 82.0 bits (201), Expect = 8e-16
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Frame = +1
Query: 631 PVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSG------SDIAFHLNPRFKE 792
P L +PF I GG+ P K ++V G + + +SF I+L G +D+A L F +
Sbjct: 35 PRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTD 94
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLK 972
++RN+ I G E+ +P PF Q F V ILCE F+V VDG LF++YHR++
Sbjct: 95 RQLLRNSCISGERGEEQSAIPY-FPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQ 153
Query: 973 HLPTINS 993
L I++
Sbjct: 154 TLSAIDT 160
Score = 55.5 bits (132), Expect = 8e-08
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Frame = +1
Query: 106 MVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEEGG 276
+VPF G I+GG++ G ++ + G V ++ S F ++L G S++ D+A F +
Sbjct: 38 IVPFCGHIKGGMRPGKKVLVMGIVDLNPES-FAISLTCGDSEDPPADVAIELKAVFTDR- 95
Query: 277 YVVCNTKQNGIWGPEERKMQ-MPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRV-PF 450
++ N+ +G G E+ + PF PF + L + +F+V V+G + HR+
Sbjct: 96 QLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTL 155
Query: 451 HRVDTISVTGIVQLS 495
+DTI + G +Q++
Sbjct: 156 SAIDTIKINGDLQIT 170
>ref|XP_547010.2| PREDICTED: similar to galectin-related inter-fiber protein [Canis
familiaris].
Length = 144
Score = 61.2 bits (147), Expect = 1e-09
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +1
Query: 637 LPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYIN-LRSGSDIAFHLNPRFKENAVVRNT 813
+ + F A GGL P S++V G F IN L DIAFHL PRF VV NT
Sbjct: 1 MALQFEAFCAGGLAPGWSLLVQGHSDSGEDKFEINFLSEAGDIAFHLKPRFSSATVVGNT 60
Query: 814 QIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTI 987
G WG EE + P G+ F + + ++ F V + ++ HR + L I
Sbjct: 61 FQGGRWGQEE--VSSVFPLVLGEPFEMEVSSDAEHFHVHAQEHKVLQFAHRHRPLAAI 116
Score = 57.4 bits (137), Expect = 2e-08
Identities = 37/109 (33%), Positives = 46/109 (42%)
Frame = +1
Query: 115 FTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEEGGYVVCNT 294
F GGL G + + G S +F +N + DIAFH PRF VV NT
Sbjct: 5 FEAFCAGGLAPGWSLLVQGHS-DSGEDKFEINFLS--EAGDIAFHLKPRFSSAT-VVGNT 60
Query: 295 KQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHR 441
Q G WG EE P G PFE+ + F V +Q+ HR
Sbjct: 61 FQGGRWGQEEVSSVFPLVLGEPFEMEVSSDAEHFHVHAQEHKVLQFAHR 109
>ref|NP_001188417.1| galectin-1 [Canis lupus familiaris].
Length = 135
Score = 55.8 bits (133), Expect = 6e-08
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +1
Query: 199 FTVNLQTGHSDNDIAFHFNPRFEEGGYV---VCNTKQNGIWGPEERKMQMPFQRGHPFEL 369
F +NL G +++ HFNPRFE G V VCN+K G WG E R+ PFQ G E+
Sbjct: 31 FVLNL--GKDGDNLCLHFNPRFEAHGDVNTIVCNSKDGGAWGEELRESAFPFQPGTVTEV 88
Query: 370 SFLVQSSQFQVTVNGRLFVQYTHRVPFHRVDTISVTGIVQLSYISF 507
+ + + ++ +R+ + ++ G +++ ++F
Sbjct: 89 CISFDQADLTIKLPDGYTFKFPNRLNLEAISYLAADGDMKIKCLAF 134
Score = 49.3 bits (116), Expect = 6e-06
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +1
Query: 673 LYPSKSIMVSGTILPSAQSFYINL-RSGSDIAFHLNPRFKE----NAVVRNTQIGSSWGP 837
L P + + V ++P A+SF +NL + G ++ H NPRF+ N +V N++ G +WG
Sbjct: 12 LKPGQCLRVQCEVVPEAKSFVLNLGKDGDNLCLHFNPRFEAHGDVNTIVCNSKDGGAWGE 71
Query: 838 EERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRL 969
E R PF G V I + + + + F++ +RL
Sbjct: 72 ELR--ESAFPFQPGTVTEVCISFDQADLTIKLPDGYTFKFPNRL 113
>ref|XP_861690.1| PREDICTED: similar to lectin, galactoside-binding, soluble, 2
isoform 2 [Canis familiaris].
Length = 121
Score = 55.5 bits (132), Expect = 8e-08
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +1
Query: 688 SIMVSGTILPSAQSFYINLRSGSD-IAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKM 864
++ + G I A F INL GSD + H NPRF E+ +V N++ G +WG E+R + M
Sbjct: 8 TLKIKGKIAGDADGFVINLGQGSDKLNLHFNPRFHESVIVCNSRDG-NWGQEQR--DKHM 64
Query: 865 PFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKH 975
FS G + E+ F+V + H + +RL H
Sbjct: 65 CFSPGSEVKFTVTFENDGFKVKLPDGHQLTFPNRLGH 101
>ref|XP_531742.1| PREDICTED: similar to lectin, galactoside-binding, soluble, 2
isoform 1 [Canis familiaris].
Length = 130
Score = 55.5 bits (132), Expect = 8e-08
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +1
Query: 688 SIMVSGTILPSAQSFYINLRSGSD-IAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKM 864
++ + G I A F INL GSD + H NPRF E+ +V N++ G +WG E+R + M
Sbjct: 17 TLKIKGKIAGDADGFVINLGQGSDKLNLHFNPRFHESVIVCNSRDG-NWGQEQR--DKHM 73
Query: 865 PFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKH 975
FS G + E+ F+V + H + +RL H
Sbjct: 74 CFSPGSEVKFTVTFENDGFKVKLPDGHQLTFPNRLGH 110
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,948,115
Number of extensions: 1393124
Number of successful extensions: 6254
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 6154
Number of HSP's successfully gapped: 18
Length of query: 331
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 228
Effective length of database: 15,440,896
Effective search space: 3520524288
Effective search space used: 3520524288
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008456
(993 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999097.1| galectin-9 [Sus scrofa]. 621 e-178
Alignment gi|NP_999146.1| galectin-4 [Sus scrofa]. 185 4e-47
Alignment gi|NP_001136299.1| galectin-8 [Sus scrofa]. 176 1e-44
Alignment gi|NP_001136316.1| galectin-12 [Sus scrofa]. 135 3e-32
Alignment gi|NP_001090970.1| galectin-3 [Sus scrofa]. 100 1e-21
Alignment gi|NP_001136315.1| galectin-7 [Sus scrofa]. 83 3e-16
Alignment gi|XP_003125139.2| PREDICTED: galectin-related protein A [Sus s... 82 5e-16
Alignment gi|XP_003355958.1| PREDICTED: eosinophil lysophospholipase-like... 82 6e-16
Alignment gi|NP_001136313.1| galactoside-binding soluble lectin 13 [Sus s... 82 6e-16
Alignment gi|NP_001001867.1| galectin-1 [Sus scrofa]. 61 1e-09
>ref|NP_999097.1| galectin-9 [Sus scrofa].
Length = 349
Score = 621 bits (1601), Expect = e-178
Identities = 305/339 (89%), Positives = 306/339 (90%), Gaps = 32/339 (9%)
Frame = +1
Query: 73 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 252
FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF
Sbjct: 3 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 62
Query: 253 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY
Sbjct: 63 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 122
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQ--------------------------------PP 516
THRVPFHRVDTISVTGIVQLSYISFQ PP
Sbjct: 123 THRVPFHRVDTISVTGIVQLSYISFQNTHAAPIQPTFSTVQFSQPACFPPRHKGRKPKPP 182
Query: 517 GRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIM 696
GRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPV PIPFFASIPGGLYPSKSIM
Sbjct: 183 GRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVFPIPFFASIPGGLYPSKSIM 242
Query: 697 VSGTILPSAQSFYINLRSGSDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSR 876
VSGTILPSAQSFYINLRSGSDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSR
Sbjct: 243 VSGTILPSAQSFYINLRSGSDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSR 302
Query: 877 GQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
GQSFLVWILCESHCF+VAVDGQHLFEYYHRLKHLPTINS
Sbjct: 303 GQSFLVWILCESHCFKVAVDGQHLFEYYHRLKHLPTINS 341
>ref|NP_999146.1| galectin-4 [Sus scrofa].
Length = 323
Score = 185 bits (469), Expect = 4e-47
Identities = 115/312 (36%), Positives = 162/312 (51%), Gaps = 11/312 (3%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN-DIAFHFNPRFE 267
P NP +P+ I GGL+ G+ + I G V RF VN G D+AFHFNPRF+
Sbjct: 11 PTYNPTLPYYKPIPGGLRVGMSVYIQG-VANEHMKRFFVNFVVGQGPGADVAFHFNPRFD 69
Query: 268 EGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
VV N++Q+G WG EE+K MPF++ FEL +V ++V VNG F ++ HR+P
Sbjct: 70 GWDKVVFNSQQDGKWGNEEKKRSMPFRKAPAFELVIMVLPEHYKVVVNGDPFYEFGHRIP 129
Query: 448 FHRVDTISVTGIVQLSYISF---QP---PGRWPANSAPITQTVIHTVQSTPGQMFPNPMI 609
V + V G + L I+F QP PG P P PG+ P
Sbjct: 130 VQLVTHLQVDGDLTLQSINFIGGQPAPSPGPMPNPGYP-----------GPGKHNQQPCN 178
Query: 610 PPMAYPNPVL--PIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS--DIAFHLN 777
P P P+P+ + GGL ++I++ G + PS +S IN + GS D+A H+N
Sbjct: 179 LPCMEGAPTFNPPVPYKTRLQGGLVARRTIVIKGYVPPSGKSLVINFKVGSSGDVALHIN 238
Query: 778 PRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEY 957
PR E VVRN+ + WG EER PF+ GQ F + I C F+V +GQHLF++
Sbjct: 239 PRLTEGIVVRNSYLNGKWGAEERKSSFN-PFAPGQYFDLSIRCGLDRFKVYANGQHLFDF 297
Query: 958 YHRLKHLPTINS 993
HRL + +++
Sbjct: 298 SHRLSNFQGVDT 309
Score = 93.6 bits (231), Expect = 2e-19
Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Frame = +1
Query: 88 APYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFE 267
AP NP VP+ +QGGL I I G V SG +N + G S D+A H NPR
Sbjct: 185 APTFNPPVPYKTRLQGGLVARRTIVIKGYV-PPSGKSLVINFKVG-SSGDVALHINPRLT 242
Query: 268 EGGYVVCNTKQNGIWGPEERKMQM-PFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRV 444
E G VV N+ NG WG EERK PF G F+LS +F+V NG+ ++HR+
Sbjct: 243 E-GIVVRNSYLNGKWGAEERKSSFNPFAPGQYFDLSIRCGLDRFKVYANGQHLFDFSHRL 301
Query: 445 P-FHRVDTISVTGIVQLSYI 501
F VDT+ + G V LSY+
Sbjct: 302 SNFQGVDTLEIQGDVTLSYV 321
>ref|NP_001136299.1| galectin-8 [Sus scrofa].
Length = 317
Score = 176 bits (447), Expect = 1e-44
Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 8/306 (2%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++P+ G I L+ G I + G V S RF V+LQ G+S D+AFHFNPRF+
Sbjct: 14 NPIIPYVGTISEQLEPGTLIVLRGHV-PSDSDRFQVDLQCGNSVKPRADVAFHFNPRFKR 72
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
+VCNT +N WG EE MPF++ FE+ +V +FQV VNG+ + Y+HR+
Sbjct: 73 ANCIVCNTLKNEKWGWEEIVYDMPFKKEKSFEIVIMVLKDKFQVAVNGKHTLLYSHRISP 132
Query: 451 HRVDTISVTGIVQLSYISFQPPG---RWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMA 621
+++T+ + G V + + F A++ +T+ VQ F
Sbjct: 133 EKINTLGIYGKVIIHSLGFSFSSDLKSTQASTPELTEISQENVQKFDVSQF--------- 183
Query: 622 YPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSG--SDIAFHLNPRFKEN 795
+PF A + + P ++I++ G + +A+ F ++L SG DIA HLNPR
Sbjct: 184 ------TLPFVARLNSPMGPGRTIVIKGEVNTNAKGFNVDLLSGKSKDIARHLNPRLNVK 237
Query: 796 AVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKH 975
A VRN+ + SWG EER + PFS G F + I C+ F+VA++G H EY HR +
Sbjct: 238 AFVRNSFLQESWGEEERNI-TCFPFSPGMYFEMIIYCDVREFKVAINGVHSLEYKHRFRE 296
Query: 976 LPTINS 993
L I++
Sbjct: 297 LSNIDT 302
>ref|NP_001136316.1| galectin-12 [Sus scrofa].
Length = 314
Score = 135 bits (341), Expect = 3e-32
Identities = 93/292 (31%), Positives = 145/292 (49%), Gaps = 4/292 (1%)
Frame = +1
Query: 85 QAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTG---HSDNDIAFHFN 255
Q P +P+VP+ I GGL+ G + + G V + + RF V+ Q G H DIA HFN
Sbjct: 17 QPPVFHPVVPYVTTIFGGLRAGKMVQLQGVVPLDA-RRFQVDFQCGCSLHPRPDIAIHFN 75
Query: 256 PRFEEGG-YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
PRF +V+CNT Q G W E R + QRG F + FL + + +V+VNG F+ Y
Sbjct: 76 PRFHTTKPHVICNTLQGGHWQAEARWPHLALQRGASFLILFLFGNEEMKVSVNGLHFLHY 135
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
+R+P RVDT+ + G + ++ + F N P + G + P+
Sbjct: 136 RYRLPLSRVDTLGIYGDILVTAVGF-------LNINPFVE---------GGSEY--PVGH 177
Query: 613 PMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
P +P L +P ++P GL+P + I+V G +LP + F + LR D A H+ +
Sbjct: 178 PFLLKSPRLEVPCSRALPRGLWPGQVIIVRGLVLPEPKDFTLRLR---DEAAHVPVTLRA 234
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHL 948
+ R S WG ++ +P F + F V +LC+ ++A++GQ L
Sbjct: 235 SFADRTLAWVSRWGGKKL-IPAPFLFYPQRFFEVLLLCQEGGLKLALNGQGL 285
Score = 62.0 bits (149), Expect = 5e-10
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Frame = +1
Query: 610 PPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS------DIAFH 771
PP+ +P +P+ +I GGL K + + G + A+ F ++ + G DIA H
Sbjct: 18 PPVFHP----VVPYVTTIFGGLRAGKMVQLQGVVPLDARRFQVDFQCGCSLHPRPDIAIH 73
Query: 772 LNPRFKENA--VVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQH 945
NPRF V+ NT G W E R + RG SFL+ L + +V+V+G H
Sbjct: 74 FNPRFHTTKPHVICNTLQGGHWQAEARW--PHLALQRGASFLILFLFGNEEMKVSVNGLH 131
Query: 946 LFEYYHRL 969
Y +RL
Sbjct: 132 FLHYRYRL 139
>ref|NP_001090970.1| galectin-3 [Sus scrofa].
Length = 260
Score = 100 bits (249), Expect = 1e-21
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 23/189 (12%)
Frame = +1
Query: 493 SYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLP---------- 642
+Y PPG +P +AP + + PG +P P AYP P P
Sbjct: 62 AYPGQAPPGAYPGPTAPG-----YPGPAAPGA-YPGQPGGPGAYPPPAQPSAPGAYPATG 115
Query: 643 ----------IPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
+P+ +PGG+ P I + GT+ P+A ++ + G+D+AFH NPRF E
Sbjct: 116 PYGAPSGPLNVPYDLPLPGGVMPRMLITILGTVKPNANRLALDFKKGNDVAFHFNPRFNE 175
Query: 793 N---AVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYH 963
+ +V N+++ ++WG EER + PF G+ F + +L E F+VAV+ HL +Y H
Sbjct: 176 DNRRVIVCNSKLDNNWGREERQM--VFPFECGKPFKIQVLVEPDHFKVAVNDAHLLQYNH 233
Query: 964 RLKHLPTIN 990
R+++L I+
Sbjct: 234 RMRNLREIS 242
Score = 94.4 bits (233), Expect = 9e-20
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Frame = +1
Query: 82 AQAPYMNPM----VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFH 249
A PY P VP+ + GG+ + ITI GTV + +R ++ + G ND+AFH
Sbjct: 113 ATGPYGAPSGPLNVPYDLPLPGGVMPRMLITILGTV-KPNANRLALDFKKG---NDVAFH 168
Query: 250 FNPRFEEGG--YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLF 423
FNPRF E +VCN+K + WG EER+M PF+ G PF++ LV+ F+V VN
Sbjct: 169 FNPRFNEDNRRVIVCNSKLDNNWGREERQMVFPFECGKPFKIQVLVEPDHFKVAVNDAHL 228
Query: 424 VQYTHRV-PFHRVDTISVTGIVQLSYIS 504
+QY HR+ + + ++G + L+ S
Sbjct: 229 LQYNHRMRNLREISKLGISGDITLTSAS 256
>ref|NP_001136315.1| galectin-7 [Sus scrofa].
Length = 138
Score = 82.8 bits (203), Expect = 3e-16
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +1
Query: 109 VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSD-NDIAFHFNPRFEEGGYVV 285
+P ++ G++ G + I G V +G RF VNL G ++ A HFNPR +E VV
Sbjct: 6 MPHKTLLADGIRVGTVMRIRGVVPDQAG-RFYVNLLCGEEPGSEAALHFNPRLDESS-VV 63
Query: 286 CNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPFHRVDT 465
N+ ++G WG EER +PFQRG PF++ + F+V V + + HR+P RV
Sbjct: 64 FNSLEHGAWGREERGPGIPFQRGQPFDVLLITTDEGFKVVVGDLEYHHFRHRMPPTRVRA 123
Query: 466 ISVTGIVQLSYI 501
+ V G +QL +
Sbjct: 124 VEVGGDLQLELV 135
Score = 62.4 bits (150), Expect = 4e-10
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +1
Query: 643 IPFFASIPGGLYPSKSIMVSGTILPSAQSFYINL----RSGSDIAFHLNPRFKENAVVRN 810
+P + G+ + + G + A FY+NL GS+ A H NPR E++VV N
Sbjct: 6 MPHKTLLADGIRVGTVMRIRGVVPDQAGRFYVNLLCGEEPGSEAALHFNPRLDESSVVFN 65
Query: 811 TQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRL 969
+ +WG EERG +PF RGQ F V ++ F+V V + HR+
Sbjct: 66 SLEHGAWGREERG--PGIPFQRGQPFDVLLITTDEGFKVVVGDLEYHHFRHRM 116
>ref|XP_003125139.2| PREDICTED: galectin-related protein A [Sus scrofa].
Length = 274
Score = 82.0 bits (201), Expect = 5e-16
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Frame = +1
Query: 631 PVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSG------SDIAFHLNPRFKE 792
P L +PF I GG+ P K ++V G + + +SF I+L G +D+A L F +
Sbjct: 136 PRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTD 195
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLK 972
++RN+ I G E+ +P PF Q F V ILCE F+V VDG LF++YHR++
Sbjct: 196 RQLLRNSCISGERGEEQSAIPY-FPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQ 254
Query: 973 HLPTINS 993
L I++
Sbjct: 255 TLSAIDT 261
Score = 55.5 bits (132), Expect = 5e-08
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Frame = +1
Query: 106 MVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEEGG 276
+VPF G I+GG++ G ++ + G V ++ S F ++L G S++ D+A F +
Sbjct: 139 IVPFCGHIKGGMRPGKKVLVMGIVDLNPES-FAISLTCGDSEDPPADVAIELKAVFTDR- 196
Query: 277 YVVCNTKQNGIWGPEERKMQ-MPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRV-PF 450
++ N+ +G G E+ + PF PF + L + +F+V V+G + HR+
Sbjct: 197 QLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTL 256
Query: 451 HRVDTISVTGIVQLS 495
+DTI + G +Q++
Sbjct: 257 SAIDTIKINGDLQIT 271
>ref|XP_003355958.1| PREDICTED: eosinophil lysophospholipase-like [Sus scrofa].
Length = 138
Score = 81.6 bits (200), Expect = 6e-16
Identities = 52/136 (38%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Frame = +1
Query: 103 PMVPFTGMIQGGLQDGLQITING--TVLMSSGSRFTVNLQT-GHSDNDIAFHFNPRFEEG 273
P VP+T + L G +TI G V S V+ T D+DIAFHF F G
Sbjct: 4 PQVPYTKHVS--LPVGSSVTIRGKPAVCFSKNPEMQVDFHTEADGDSDIAFHFRVSF--G 59
Query: 274 GYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPFH 453
YV N++QNG W E + MPF G PFEL LV +++QV VNG+ + + HR+
Sbjct: 60 LYVRMNSRQNGSWNCEVKSSDMPFADGQPFELHILVLQNEYQVMVNGQHYYSFPHRLSPQ 119
Query: 454 RVDTISVTGIVQLSYI 501
V + V V LS +
Sbjct: 120 SVKLMQVWRDVSLSSV 135
>ref|NP_001136313.1| galactoside-binding soluble lectin 13 [Sus scrofa].
Length = 138
Score = 81.6 bits (200), Expect = 6e-16
Identities = 52/136 (38%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Frame = +1
Query: 103 PMVPFTGMIQGGLQDGLQITING--TVLMSSGSRFTVNLQT-GHSDNDIAFHFNPRFEEG 273
P VP+T + L G +TI G V S V+ T D+DIAFHF F G
Sbjct: 4 PQVPYTKHVS--LPVGSSVTIRGKPAVCFSKNPEMQVDFHTEADGDSDIAFHFRVSF--G 59
Query: 274 GYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPFH 453
YV N++QNG W E + MPF G PFEL LV +++QV VNG+ + + HR+
Sbjct: 60 LYVRMNSRQNGSWNCEVKSSDMPFADGQPFELHILVLQNEYQVMVNGQHYYSFPHRLSPQ 119
Query: 454 RVDTISVTGIVQLSYI 501
V + V V LS +
Sbjct: 120 SVKLMQVWRDVSLSSV 135
>ref|NP_001001867.1| galectin-1 [Sus scrofa].
Length = 135
Score = 60.8 bits (146), Expect = 1e-09
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Frame = +1
Query: 139 LQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEEGG---YVVCNTKQNGI 309
L+ G + + G V + S F +NL G N++ HFNPRF+ G +VCN+K G
Sbjct: 12 LKPGECLKVRGEVTPDAKS-FVLNL--GKDSNNLCLHFNPRFDMHGDINTIVCNSKDGGA 68
Query: 310 WGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPFHRVDTISVTGIVQ 489
WG E+R+ PFQ G E+ + + + + +R+ ++ ++ G +
Sbjct: 69 WGAEQRESAFPFQPGSVVEVCISFGQTDLTIKLPDGCEFSFPNRLNLEAIEYLAADGDFK 128
Query: 490 LSYISFQ 510
+ ++F+
Sbjct: 129 IKCVAFE 135
Score = 47.8 bits (112), Expect = 1e-05
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +1
Query: 673 LYPSKSIMVSGTILPSAQSFYINL-RSGSDIAFHLNPRFKE----NAVVRNTQIGSSWGP 837
L P + + V G + P A+SF +NL + +++ H NPRF N +V N++ G +WG
Sbjct: 12 LKPGECLKVRGEVTPDAKSFVLNLGKDSNNLCLHFNPRFDMHGDINTIVCNSKDGGAWGA 71
Query: 838 EERGLPRKMPFSRG 879
E+R PF G
Sbjct: 72 EQR--ESAFPFQPG 83
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,816,455
Number of extensions: 866166
Number of successful extensions: 4237
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 4153
Number of HSP's successfully gapped: 20
Length of query: 331
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 232
Effective length of database: 8,879,129
Effective search space: 2059957928
Effective search space used: 2059957928
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008456
(993 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001152773.1| galectin-9 isoform 2 [Mus musculus]. 442 e-124
Alignment gi|NP_034838.2| galectin-9 isoform 1 [Mus musculus]. 430 e-121
Alignment gi|NP_034836.1| galectin-4 [Mus musculus]. 201 7e-52
Alignment gi|NP_034837.1| galectin-6 [Mus musculus]. 187 8e-48
Alignment gi|NP_001185972.1| galectin-8 [Mus musculus]. 181 6e-46
Alignment gi|NP_061374.1| galectin-8 [Mus musculus]. 181 6e-46
Alignment gi|NP_062389.1| galectin-12 [Mus musculus]. 130 1e-30
Alignment gi|NP_034835.1| galectin-3 [Mus musculus]. 107 2e-23
Alignment gi|NP_001139425.1| galectin-3 [Mus musculus]. 107 2e-23
Alignment gi|NP_776113.1| galectin-related protein A [Mus musculus]. 82 6e-16
>ref|NP_001152773.1| galectin-9 isoform 2 [Mus musculus].
Length = 322
Score = 442 bits (1137), Expect = e-124
Identities = 208/304 (68%), Positives = 242/304 (79%)
Frame = +1
Query: 82 AQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPR 261
AQ+PY+NP++PFTG IQGGLQ+GLQ+T+ GT S RF VN Q + NDIAFHFNPR
Sbjct: 6 AQSPYINPIIPFTGPIQGGLQEGLQVTLQGTT-KSFAQRFVVNFQNSFNGNDIAFHFNPR 64
Query: 262 FEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHR 441
FEEGGYVVCNTKQNG WGPEERKMQMPFQ+G PFEL FLVQ S+F+V VN + FVQY HR
Sbjct: 65 FEEGGYVVCNTKQNGQWGPEERKMQMPFQKGMPFELCFLVQRSEFKVMVNKKFFVQYQHR 124
Query: 442 VPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMA 621
VP+H VDTI+V+G ++LS+I+FQ PA+ AP+ QT IH V STPGQMF P IPP+
Sbjct: 125 VPYHLVDTIAVSGCLKLSFITFQTQNFRPAHQAPMAQTTIHMVHSTPGQMFSTPGIPPVV 184
Query: 622 YPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKENAV 801
YP P IPF+ IP GLYPSKSIM+SG +LP A F+INLR G DIAFHLNPRF ENAV
Sbjct: 185 YPTPAYTIPFYTPIPNGLYPSKSIMISGNVLPDATRFHINLRCGGDIAFHLNPRFNENAV 244
Query: 802 VRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLP 981
VRNTQI +SWG EER L +MPFSRGQSF VWI+CE HCF+VAV+GQH+ EYYHRLK+L
Sbjct: 245 VRNTQINNSWGQEERSLLGRMPFSRGQSFSVWIICEGHCFKVAVNGQHMCEYYHRLKNLQ 304
Query: 982 TINS 993
IN+
Sbjct: 305 DINT 308
>ref|NP_034838.2| galectin-9 isoform 1 [Mus musculus].
Length = 353
Score = 430 bits (1106), Expect = e-121
Identities = 211/335 (62%), Positives = 245/335 (73%), Gaps = 31/335 (9%)
Frame = +1
Query: 82 AQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPR 261
AQ+PY+NP++PFTG IQGGLQ+GLQ+T+ GT S RF VN Q + NDIAFHFNPR
Sbjct: 6 AQSPYINPIIPFTGPIQGGLQEGLQVTLQGTT-KSFAQRFVVNFQNSFNGNDIAFHFNPR 64
Query: 262 FEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHR 441
FEEGGYVVCNTKQNG WGPEERKMQMPFQ+G PFEL FLVQ S+F+V VN + FVQY HR
Sbjct: 65 FEEGGYVVCNTKQNGQWGPEERKMQMPFQKGMPFELCFLVQRSEFKVMVNKKFFVQYQHR 124
Query: 442 VPFHRVDTISVTGIVQLSYISFQ------------------------PPGRW-------P 528
VP+H VDTI+V+G ++LS+I+FQ P GR P
Sbjct: 125 VPYHLVDTIAVSGCLKLSFITFQNSAAPVQHVFSTVQFSQPVQFPRTPKGRKQKTQNFRP 184
Query: 529 ANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGT 708
A+ AP+ QT IH V STPGQMF P IPP+ YP P IPF+ IP GLYPSKSIM+SG
Sbjct: 185 AHQAPMAQTTIHMVHSTPGQMFSTPGIPPVVYPTPAYTIPFYTPIPNGLYPSKSIMISGN 244
Query: 709 ILPSAQSFYINLRSGSDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSF 888
+LP A F+INLR G DIAFHLNPRF ENAVVRNTQI +SWG EER L +MPFSRGQSF
Sbjct: 245 VLPDATRFHINLRCGGDIAFHLNPRFNENAVVRNTQINNSWGQEERSLLGRMPFSRGQSF 304
Query: 889 LVWILCESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
VWI+CE HCF+VAV+GQH+ EYYHRLK+L IN+
Sbjct: 305 SVWIICEGHCFKVAVNGQHMCEYYHRLKNLQDINT 339
>ref|NP_034836.1| galectin-4 [Mus musculus].
Length = 326
Score = 201 bits (511), Expect = 7e-52
Identities = 120/306 (39%), Positives = 171/306 (55%), Gaps = 5/306 (1%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN-DIAFHFNPRFE 267
P NP +P+ I GGL G+ + I G + + RF VN G D D+AFHFNPRF+
Sbjct: 11 PTYNPTLPYKRPIPGGLSVGMSVYIQG-MAKENMRRFHVNFAVGQDDGADVAFHFNPRFD 69
Query: 268 EGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
VV NT Q+G WG EE+K MPFQ+G FEL F+V ++V VNG F +Y HR+P
Sbjct: 70 GWDKVVFNTMQSGQWGKEEKKKSMPFQKGKHFELVFMVMPEHYKVVVNGNSFYEYGHRLP 129
Query: 448 FHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYP 627
V + V G ++L I+F G+ A P T+ +PG P P+
Sbjct: 130 VQMVTHLQVDGDLELQSINFL-GGQPAAAPYPGAMTIPAYPAGSPGYNPPQMNTLPVMTG 188
Query: 628 NPVL--PIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS--DIAFHLNPRFKEN 795
PV +P+ ++ GGL ++I++ G +LP+A++F IN + GS DIA HLNPR +
Sbjct: 189 PPVFNPRVPYVGALQGGLTVRRTIIIKGYVLPTARNFVINFKVGSSGDIALHLNPRIGD- 247
Query: 796 AVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKH 975
+VVRN+ + SWG EER + PF GQ F + I C F+V +GQHLF++ HR +
Sbjct: 248 SVVRNSFMNGSWGAEERKVAYN-PFGPGQFFDLSIRCGMDRFKVFANGQHLFDFSHRFQA 306
Query: 976 LPTINS 993
+++
Sbjct: 307 FQMVDT 312
Score = 94.7 bits (234), Expect = 1e-19
Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEE 270
P NP VP+ G +QGGL I I G VL ++ + F +N + G S DIA H NPR
Sbjct: 190 PVFNPRVPYVGALQGGLTVRRTIIIKGYVLPTARN-FVINFKVG-SSGDIALHLNPRI-- 245
Query: 271 GGYVVCNTKQNGIWGPEERKMQM-PFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
G VV N+ NG WG EERK+ PF G F+LS +F+V NG+ ++HR
Sbjct: 246 GDSVVRNSFMNGSWGAEERKVAYNPFGPGQFFDLSIRCGMDRFKVFANGQHLFDFSHRFQ 305
Query: 448 -FHRVDTISVTGIVQLSYI 501
F VDT+ + G + LSY+
Sbjct: 306 AFQMVDTLEINGDITLSYV 324
>ref|NP_034837.1| galectin-6 [Mus musculus].
Length = 301
Score = 187 bits (476), Expect = 8e-48
Identities = 121/304 (39%), Positives = 164/304 (53%), Gaps = 3/304 (0%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN-DIAFHFNPRFE 267
P NP +P+ I GGL G+ I GT + RF VN G D D+AFHFNPRF+
Sbjct: 11 PTYNPTLPYKRPIPGGLSVGMSFYIQGTA-KENMRRFHVNFAVGQDDGADVAFHFNPRFD 69
Query: 268 EGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
VV NTKQ+G WG EE K MPFQ+G FEL F+V ++V VNG F +Y HR+P
Sbjct: 70 GWDKVVFNTKQSGRWGKEEEK-SMPFQKGKHFELVFMVMPEHYKVVVNGSPFYEYGHRLP 128
Query: 448 FHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYP 627
V + V G ++L I+F G PA + +P PP+
Sbjct: 129 VQMVTHLQVDGDLELQSINFF--GVQPAET-----------------KYPAMTGPPVF-- 167
Query: 628 NPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS--DIAFHLNPRFKENAV 801
NP L P+ ++ GG ++I++ G +LP+A++F IN R GS DIA H+NPR + +
Sbjct: 168 NPCL--PYVGALQGGFTVRRTIIIKGYVLPTAKTFAINFRVGSSEDIALHINPRIGD-CL 224
Query: 802 VRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLP 981
VRN+ + SWG EER + PF GQ F + I C F+V +G HLF + HR + L
Sbjct: 225 VRNSYMNGSWGTEER-MVAYNPFGPGQFFDLSIRCGMDRFKVFANGIHLFNFSHRFQALR 283
Query: 982 TINS 993
IN+
Sbjct: 284 KINT 287
>ref|NP_001185972.1| galectin-8 [Mus musculus].
Length = 316
Score = 181 bits (460), Expect = 6e-46
Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 8/306 (2%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++P+ G I L+ G I I G V S RF V+ Q G+S D+AFHFNPRF+
Sbjct: 13 NPIIPYVGTITEQLKPGSLIVIRGHVPKDS-ERFQVDFQLGNSLKPRADVAFHFNPRFKR 71
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
+VCNT WG EE MPF++ FE+ F+V ++FQV VNGR + Y HR+
Sbjct: 72 SSCIVCNTLTQEKWGWEEITYDMPFRKEKSFEIVFMVLKNKFQVAVNGRHVLLYAHRISP 131
Query: 451 HRVDTISVTGIVQLSYISFQPPG---RWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMA 621
++DT+ + G V + I F+ ++ +TQ +Q PG++
Sbjct: 132 EQIDTVGIYGKVNIHSIGFRFSSDLQSMETSALGLTQINRENIQK-PGKL---------- 180
Query: 622 YPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS--DIAFHLNPRFKEN 795
L +PF A + + P +++++ G + +A+SF ++L +G DIA HLNPR
Sbjct: 181 ----QLSLPFEARLNASMGPGRTVVIKGEVNTNARSFNVDLVAGKTRDIALHLNPRLNVK 236
Query: 796 AVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKH 975
A VRN+ + +WG EER + PFS G F + I C+ F+VA++G H EY HR K
Sbjct: 237 AFVRNSFLQDAWGEEERNI-TCFPFSSGMYFEMIIYCDVREFKVAINGVHSLEYKHRFKD 295
Query: 976 LPTINS 993
L +I++
Sbjct: 296 LSSIDT 301
>ref|NP_061374.1| galectin-8 [Mus musculus].
Length = 316
Score = 181 bits (460), Expect = 6e-46
Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 8/306 (2%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++P+ G I L+ G I I G V S RF V+ Q G+S D+AFHFNPRF+
Sbjct: 13 NPIIPYVGTITEQLKPGSLIVIRGHVPKDS-ERFQVDFQLGNSLKPRADVAFHFNPRFKR 71
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
+VCNT WG EE MPF++ FE+ F+V ++FQV VNGR + Y HR+
Sbjct: 72 SSCIVCNTLTQEKWGWEEITYDMPFRKEKSFEIVFMVLKNKFQVAVNGRHVLLYAHRISP 131
Query: 451 HRVDTISVTGIVQLSYISFQPPG---RWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMA 621
++DT+ + G V + I F+ ++ +TQ +Q PG++
Sbjct: 132 EQIDTVGIYGKVNIHSIGFRFSSDLQSMETSALGLTQINRENIQK-PGKL---------- 180
Query: 622 YPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS--DIAFHLNPRFKEN 795
L +PF A + + P +++++ G + +A+SF ++L +G DIA HLNPR
Sbjct: 181 ----QLSLPFEARLNASMGPGRTVVIKGEVNTNARSFNVDLVAGKTRDIALHLNPRLNVK 236
Query: 796 AVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKH 975
A VRN+ + +WG EER + PFS G F + I C+ F+VA++G H EY HR K
Sbjct: 237 AFVRNSFLQDAWGEEERNI-TCFPFSSGMYFEMIIYCDVREFKVAINGVHSLEYKHRFKD 295
Query: 976 LPTINS 993
L +I++
Sbjct: 296 LSSIDT 301
>ref|NP_062389.1| galectin-12 [Mus musculus].
Length = 314
Score = 130 bits (328), Expect = 1e-30
Identities = 88/296 (29%), Positives = 147/296 (49%), Gaps = 8/296 (2%)
Frame = +1
Query: 85 QAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTG---HSDNDIAFHFN 255
Q P +P++P+ I GGL G +T+ G V + + RF V+ Q G H D+AF F+
Sbjct: 17 QPPVFHPVIPYGTTIFGGLYAGKMVTLQGVVPLHA-RRFQVDFQCGCCLHPQPDVAFRFS 75
Query: 256 PRFEE-GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
PRF +V+CNT Q G+W E R + QRG F + FL ++ + +V+VNG+ F+ Y
Sbjct: 76 PRFYTVKPHVICNTHQGGLWQKEIRWPGVALQRGDSFLILFLFENEEVKVSVNGQHFLHY 135
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
+R+P RVDT+ ++G + + + F N P +
Sbjct: 136 RYRLPLSRVDTLDISGDILVKAVGF-------LNINPFVE---------------GSREY 173
Query: 613 PMAYP----NPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNP 780
P+ YP +P L +P ++P GL+P + I+V G +L + F ++L+ G+ H+
Sbjct: 174 PVGYPFLLYSPRLEVPCSRALPRGLWPGQVIVVRGLVLKEPKDFTLSLKDGTT---HVPV 230
Query: 781 RFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHL 948
+ + R SSWG ++ + F + F V +LC+ ++A++GQ L
Sbjct: 231 TLRASFTDRTLAWVSSWG-RKKLISAPFLFHPQRFFEVLLLCQEGGLKLALNGQGL 285
Score = 64.7 bits (156), Expect = 1e-10
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Frame = +1
Query: 610 PPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS------DIAFH 771
PP+ +P IP+ +I GGLY K + + G + A+ F ++ + G D+AF
Sbjct: 18 PPVFHP----VIPYGTTIFGGLYAGKMVTLQGVVPLHARRFQVDFQCGCCLHPQPDVAFR 73
Query: 772 LNPRFK--ENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQH 945
+PRF + V+ NT G W E R + RG SFL+ L E+ +V+V+GQH
Sbjct: 74 FSPRFYTVKPHVICNTHQGGLWQKEIRW--PGVALQRGDSFLILFLFENEEVKVSVNGQH 131
Query: 946 LFEYYHRL 969
Y +RL
Sbjct: 132 FLHYRYRL 139
>ref|NP_034835.1| galectin-3 [Mus musculus].
Length = 264
Score = 107 bits (266), Expect = 2e-23
Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 13/172 (7%)
Frame = +1
Query: 514 PGRWPANSAPITQTVIHTVQSTPGQ-----MFPN-----PMIPPMAYPNPVLPIPFFASI 663
PG +P +AP + PGQ +P+ P P P L +P+ +
Sbjct: 77 PGAYPGPTAPGAYPGSTAPGAFPGQPGAPGAYPSAPGGYPAAGPYGVPAGPLTVPYDLPL 136
Query: 664 PGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKEN---AVVRNTQIGSSWG 834
PGG+ P I + GT+ P+A ++ R G+D+AFH NPRF EN +V NT+ ++WG
Sbjct: 137 PGGVMPRMLITIMGTVKPNANRIVLDFRRGNDVAFHFNPRFNENNRRVIVCNTKQDNNWG 196
Query: 835 PEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTIN 990
EER PF G+ F + +L E+ F+VAV+ HL +Y HR+K+L I+
Sbjct: 197 KEER--QSAFPFESGKPFKIQVLVEADHFKVAVNDAHLLQYNHRMKNLREIS 246
Score = 99.0 bits (245), Expect = 5e-21
Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Frame = +1
Query: 82 AQAPYMNPM----VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFH 249
A PY P VP+ + GG+ + ITI GTV + +R ++ + G ND+AFH
Sbjct: 117 AAGPYGVPAGPLTVPYDLPLPGGVMPRMLITIMGTV-KPNANRIVLDFRRG---NDVAFH 172
Query: 250 FNPRFEEGG--YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLF 423
FNPRF E +VCNTKQ+ WG EER+ PF+ G PF++ LV++ F+V VN
Sbjct: 173 FNPRFNENNRRVIVCNTKQDNNWGKEERQSAFPFESGKPFKIQVLVEADHFKVAVNDAHL 232
Query: 424 VQYTHRVP-FHRVDTISVTGIVQLS 495
+QY HR+ + + ++G + L+
Sbjct: 233 LQYNHRMKNLREISQLGISGDITLT 257
>ref|NP_001139425.1| galectin-3 [Mus musculus].
Length = 264
Score = 107 bits (266), Expect = 2e-23
Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 13/172 (7%)
Frame = +1
Query: 514 PGRWPANSAPITQTVIHTVQSTPGQ-----MFPN-----PMIPPMAYPNPVLPIPFFASI 663
PG +P +AP + PGQ +P+ P P P L +P+ +
Sbjct: 77 PGAYPGPTAPGAYPGSTAPGAFPGQPGAPGAYPSAPGGYPAAGPYGVPAGPLTVPYDLPL 136
Query: 664 PGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKEN---AVVRNTQIGSSWG 834
PGG+ P I + GT+ P+A ++ R G+D+AFH NPRF EN +V NT+ ++WG
Sbjct: 137 PGGVMPRMLITIMGTVKPNANRIVLDFRRGNDVAFHFNPRFNENNRRVIVCNTKQDNNWG 196
Query: 835 PEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTIN 990
EER PF G+ F + +L E+ F+VAV+ HL +Y HR+K+L I+
Sbjct: 197 KEER--QSAFPFESGKPFKIQVLVEADHFKVAVNDAHLLQYNHRMKNLREIS 246
Score = 99.0 bits (245), Expect = 5e-21
Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Frame = +1
Query: 82 AQAPYMNPM----VPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFH 249
A PY P VP+ + GG+ + ITI GTV + +R ++ + G ND+AFH
Sbjct: 117 AAGPYGVPAGPLTVPYDLPLPGGVMPRMLITIMGTV-KPNANRIVLDFRRG---NDVAFH 172
Query: 250 FNPRFEEGG--YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLF 423
FNPRF E +VCNTKQ+ WG EER+ PF+ G PF++ LV++ F+V VN
Sbjct: 173 FNPRFNENNRRVIVCNTKQDNNWGKEERQSAFPFESGKPFKIQVLVEADHFKVAVNDAHL 232
Query: 424 VQYTHRVP-FHRVDTISVTGIVQLS 495
+QY HR+ + + ++G + L+
Sbjct: 233 LQYNHRMKNLREISQLGISGDITLT 257
>ref|NP_776113.1| galectin-related protein A [Mus musculus].
Length = 172
Score = 82.0 bits (201), Expect = 6e-16
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Frame = +1
Query: 631 PVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSG------SDIAFHLNPRFKE 792
P L +PF I GG+ P K ++V G + + +SF I+L G +D+A L F +
Sbjct: 34 PRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTD 93
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLK 972
++RN+ I G E+ +P PF Q F V ILCE F+V VDG LF++YHR++
Sbjct: 94 RQLLRNSCISGERGEEQSAIPY-FPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQ 152
Query: 973 HLPTINS 993
L I++
Sbjct: 153 TLSAIDT 159
Score = 55.5 bits (132), Expect = 6e-08
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Frame = +1
Query: 106 MVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEEGG 276
+VPF G I+GG++ G ++ + G V ++ S F ++L G S++ D+A F +
Sbjct: 37 IVPFCGHIKGGMRPGKKVLVMGIVDLNPES-FAISLTCGDSEDPPADVAIELKAVFTDR- 94
Query: 277 YVVCNTKQNGIWGPEERKMQ-MPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRV-PF 450
++ N+ +G G E+ + PF PF + L + +F+V V+G + HR+
Sbjct: 95 QLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTL 154
Query: 451 HRVDTISVTGIVQLS 495
+DTI + G +Q++
Sbjct: 155 SAIDTIKINGDLQIT 169
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,068,441
Number of extensions: 1123953
Number of successful extensions: 5250
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 5099
Number of HSP's successfully gapped: 22
Length of query: 331
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 229
Effective length of database: 12,553,887
Effective search space: 2874840123
Effective search space used: 2874840123
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008456
(993 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002299.2| galectin-9 isoform short [Homo sapiens]. 512 e-145
Alignment gi|NP_033665.1| galectin-9 isoform long [Homo sapiens]. 495 e-140
Alignment gi|NP_001036150.1| galectin-9B [Homo sapiens]. 483 e-136
Alignment gi|NP_001035167.2| galectin-9C [Homo sapiens]. 476 e-134
Alignment gi|NP_006140.1| galectin-4 [Homo sapiens]. 197 1e-50
Alignment gi|NP_963838.1| galectin-8 isoform b [Homo sapiens]. 187 1e-47
Alignment gi|NP_963837.1| galectin-8 isoform b [Homo sapiens]. 187 1e-47
Alignment gi|NP_006490.3| galectin-8 isoform a [Homo sapiens]. 186 4e-47
Alignment gi|NP_963839.1| galectin-8 isoform a [Homo sapiens]. 186 4e-47
Alignment gi|NP_001136007.1| galectin-12 isoform 1 [Homo sapiens]. 120 2e-27
>ref|NP_002299.2| galectin-9 isoform short [Homo sapiens].
Length = 323
Score = 512 bits (1318), Expect = e-145
Identities = 242/306 (79%), Positives = 266/306 (86%)
Frame = +1
Query: 73 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 252
FSG+QAPY++P VPF+G IQGGLQDGLQIT+NGTVL SSG+RF VN QTG S NDIAFHF
Sbjct: 3 FSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHF 62
Query: 253 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
NPRFE+GGYVVCNT+QNG WGPEERK MPFQ+G PF+L FLVQSS F+V VNG LFVQY
Sbjct: 63 NPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQY 122
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
HRVPFHRVDTISV G VQLSYISFQPPG WPAN APITQTVIHTVQS PGQMF P IP
Sbjct: 123 FHRVPFHRVDTISVNGSVQLSYISFQPPGVWPANPAPITQTVIHTVQSAPGQMFSTPAIP 182
Query: 613 PMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
PM YP+P P+PF +I GGLYPSKSI++SGT+LPSAQ F+INL SG+ IAFHLNPRF E
Sbjct: 183 PMMYPHPAYPMPFITTILGGLYPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDE 242
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLK 972
NAVVRNTQI +SWG EER LPRKMPF RGQSF VWILCE+HC +VAVDGQHLFEYYHRL+
Sbjct: 243 NAVVRNTQIDNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRLR 302
Query: 973 HLPTIN 990
+LPTIN
Sbjct: 303 NLPTIN 308
>ref|NP_033665.1| galectin-9 isoform long [Homo sapiens].
Length = 355
Score = 495 bits (1275), Expect = e-140
Identities = 242/338 (71%), Positives = 266/338 (78%), Gaps = 32/338 (9%)
Frame = +1
Query: 73 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 252
FSG+QAPY++P VPF+G IQGGLQDGLQIT+NGTVL SSG+RF VN QTG S NDIAFHF
Sbjct: 3 FSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHF 62
Query: 253 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
NPRFE+GGYVVCNT+QNG WGPEERK MPFQ+G PF+L FLVQSS F+V VNG LFVQY
Sbjct: 63 NPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQY 122
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQ--------------------------------PP 516
HRVPFHRVDTISV G VQLSYISFQ PP
Sbjct: 123 FHRVPFHRVDTISVNGSVQLSYISFQNPRTVPVQPAFSTVPFSQPVCFPPRPRGRRQKPP 182
Query: 517 GRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIM 696
G WPAN APITQTVIHTVQS PGQMF P IPPM YP+P P+PF +I GGLYPSKSI+
Sbjct: 183 GVWPANPAPITQTVIHTVQSAPGQMFSTPAIPPMMYPHPAYPMPFITTILGGLYPSKSIL 242
Query: 697 VSGTILPSAQSFYINLRSGSDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSR 876
+SGT+LPSAQ F+INL SG+ IAFHLNPRF ENAVVRNTQI +SWG EER LPRKMPF R
Sbjct: 243 LSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENAVVRNTQIDNSWGSEERSLPRKMPFVR 302
Query: 877 GQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTIN 990
GQSF VWILCE+HC +VAVDGQHLFEYYHRL++LPTIN
Sbjct: 303 GQSFSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTIN 340
>ref|NP_001036150.1| galectin-9B [Homo sapiens].
Length = 355
Score = 483 bits (1242), Expect = e-136
Identities = 236/338 (69%), Positives = 262/338 (77%), Gaps = 32/338 (9%)
Frame = +1
Query: 73 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 252
FSG+QAPY++P VPF+G IQGGLQDG QIT+NG VL SSG+RF V+ QTG S NDIAFHF
Sbjct: 3 FSGSQAPYLSPAVPFSGTIQGGLQDGFQITVNGAVLSSSGTRFAVDFQTGFSGNDIAFHF 62
Query: 253 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
NPRFE+GGYVVCNT+Q G WGPEERKM MPFQ+G PF+L FLVQSS F+V VNG LFVQY
Sbjct: 63 NPRFEDGGYVVCNTRQKGRWGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLFVQY 122
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQ--------------------------------PP 516
HRVPFHRVDTISV G VQLSYISFQ PP
Sbjct: 123 FHRVPFHRVDTISVNGSVQLSYISFQNPRTVPVQPAFSTVPFSQPVCFPPRPRGRRQKPP 182
Query: 517 GRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIM 696
PAN APITQTVIHTVQS GQMF P IPPM YP+P P+PF +IPGGLYPSKSI+
Sbjct: 183 SVRPANPAPITQTVIHTVQSASGQMFSTPAIPPMMYPHPAYPMPFITTIPGGLYPSKSII 242
Query: 697 VSGTILPSAQSFYINLRSGSDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSR 876
+SGT+LPSAQ F+INL SGS IAFH+NPRF ENAVVRNTQI +SWG EER LPRKMPF R
Sbjct: 243 LSGTVLPSAQRFHINLCSGSHIAFHMNPRFDENAVVRNTQINNSWGSEERSLPRKMPFVR 302
Query: 877 GQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTIN 990
GQSF VWILCE+HC +VAVDGQH+FEYYHRL++LPTIN
Sbjct: 303 GQSFSVWILCEAHCLKVAVDGQHVFEYYHRLRNLPTIN 340
>ref|NP_001035167.2| galectin-9C [Homo sapiens].
Length = 356
Score = 476 bits (1226), Expect = e-134
Identities = 235/339 (69%), Positives = 260/339 (76%), Gaps = 33/339 (9%)
Frame = +1
Query: 73 FSGAQAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHF 252
FSG QAPY++P VPF+G IQGGLQDG QIT+NG VL SG+RF V+ QTG S NDIAFHF
Sbjct: 3 FSGCQAPYLSPAVPFSGTIQGGLQDGFQITVNGAVLSCSGTRFAVDFQTGFSGNDIAFHF 62
Query: 253 NPRFEEGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
NPRFE+GGYVVCNT+Q G WGPEERKM MPFQ+G PF+L FLVQSS F+V VNG LFVQY
Sbjct: 63 NPRFEDGGYVVCNTRQKGTWGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLFVQY 122
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQ--------------------------------PP 516
HRVPFHRVDTISV G VQLSYISFQ PP
Sbjct: 123 FHRVPFHRVDTISVNGSVQLSYISFQNPRAVPVQPAFSTVPFSQPVCFPPRPRGRRQKPP 182
Query: 517 GRWPANSAPITQTVIHTVQSTPGQMF-PNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSI 693
PAN APITQTVIHTVQS GQMF P IPPM YP+P P+PF +IPGGLYPSKSI
Sbjct: 183 SVRPANPAPITQTVIHTVQSASGQMFSQTPAIPPMMYPHPAYPMPFITTIPGGLYPSKSI 242
Query: 694 MVSGTILPSAQSFYINLRSGSDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFS 873
++SGT+LPSAQ F+INL SGS IAFH+NPRF ENAVVRNTQI +SWG EER LPRKMPF
Sbjct: 243 ILSGTVLPSAQRFHINLCSGSHIAFHMNPRFDENAVVRNTQINNSWGSEERSLPRKMPFV 302
Query: 874 RGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPTIN 990
RGQSF VWILCE+HC +VAVDGQH+FEYYHRL++LPTIN
Sbjct: 303 RGQSFSVWILCEAHCLKVAVDGQHVFEYYHRLRNLPTIN 341
>ref|NP_006140.1| galectin-4 [Homo sapiens].
Length = 323
Score = 197 bits (502), Expect = 1e-50
Identities = 121/312 (38%), Positives = 163/312 (52%), Gaps = 11/312 (3%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSD-NDIAFHFNPRFE 267
P NP +P+ I GGL G+ + I G V RF VN G +D+AFHFNPRF+
Sbjct: 11 PTYNPTLPYYQPIPGGLNVGMSVYIQG-VASEHMKRFFVNFVVGQDPGSDVAFHFNPRFD 69
Query: 268 EGGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
VV NT Q G WG EERK MPF++G FEL F+V + ++V VNG F +Y HR+P
Sbjct: 70 GWDKVVFNTLQGGKWGSEERKRSMPFKKGAAFELVFIVLAEHYKVVVNGNPFYEYGHRLP 129
Query: 448 FHRVDTISVTGIVQLSYISF--------QPPGRWPANSAPITQTVIHTVQSTPGQMFPNP 603
V + V G +QL I+F Q P P P H Q P
Sbjct: 130 LQMVTHLQVDGDLQLQSINFIGGQPLRPQGPPMMPPYPGP-----GHCHQQL--NSLPTM 182
Query: 604 MIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGS--DIAFHLN 777
PP P P+P+F + GGL ++I++ G + P+ +SF IN + GS DIA H+N
Sbjct: 183 EGPPTFNP----PVPYFGRLQGGLTARRTIIIKGYVPPTGKSFAINFKVGSSGDIALHIN 238
Query: 778 PRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEY 957
PR VVRN+ + SWG EE+ + PF GQ F + I C F+V +GQHLF++
Sbjct: 239 PRMGNGTVVRNSLLNGSWGSEEKKITHN-PFGPGQFFDLSIRCGLDRFKVYANGQHLFDF 297
Query: 958 YHRLKHLPTINS 993
HRL +++
Sbjct: 298 AHRLSAFQRVDT 309
Score = 94.4 bits (233), Expect = 1e-19
Identities = 59/139 (42%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Frame = +1
Query: 91 PYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEE 270
P NP VP+ G +QGGL I I G V +G F +N + G S DIA H NPR
Sbjct: 186 PTFNPPVPYFGRLQGGLTARRTIIIKGYV-PPTGKSFAINFKVG-SSGDIALHINPRMGN 243
Query: 271 GGYVVCNTKQNGIWGPEERKM-QMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVP 447
G VV N+ NG WG EE+K+ PF G F+LS +F+V NG+ + HR+
Sbjct: 244 GT-VVRNSLLNGSWGSEEKKITHNPFGPGQFFDLSIRCGLDRFKVYANGQHLFDFAHRLS 302
Query: 448 -FHRVDTISVTGIVQLSYI 501
F RVDT+ + G V LSY+
Sbjct: 303 AFQRVDTLEIQGDVTLSYV 321
>ref|NP_963838.1| galectin-8 isoform b [Homo sapiens].
Length = 317
Score = 187 bits (475), Expect = 1e-47
Identities = 115/303 (37%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++PF G I L G I I G V S RF V+LQ G S D+AFHFNPRF+
Sbjct: 14 NPVIPFVGTIPDQLDPGTLIVIRGHV-PSDADRFQVDLQNGSSMKPRADVAFHFNPRFKR 72
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
G +VCNT N WG EE PF+R FE+ +V +FQV VNG+ + Y HR+
Sbjct: 73 AGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGP 132
Query: 451 HRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPN 630
++DT+ + G V + I F + S+ + T +++ T +P
Sbjct: 133 EKIDTLGIYGKVNIHSIGF-------SFSSDLQSTQASSLELTE---ISRENVPKSG--T 180
Query: 631 PVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSG--SDIAFHLNPRFKENAVV 804
P L +PF A + + P ++++V G + +A+SF ++L +G DIA HLNPR A V
Sbjct: 181 PQLRLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFV 240
Query: 805 RNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPT 984
RN+ + SWG EER + PFS G F + I C+ F+VAV+G H EY HR K L +
Sbjct: 241 RNSFLQESWGEEERNI-TSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSS 299
Query: 985 INS 993
I++
Sbjct: 300 IDT 302
>ref|NP_963837.1| galectin-8 isoform b [Homo sapiens].
Length = 317
Score = 187 bits (475), Expect = 1e-47
Identities = 115/303 (37%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++PF G I L G I I G V S RF V+LQ G S D+AFHFNPRF+
Sbjct: 14 NPVIPFVGTIPDQLDPGTLIVIRGHV-PSDADRFQVDLQNGSSMKPRADVAFHFNPRFKR 72
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
G +VCNT N WG EE PF+R FE+ +V +FQV VNG+ + Y HR+
Sbjct: 73 AGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGP 132
Query: 451 HRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIPPMAYPN 630
++DT+ + G V + I F + S+ + T +++ T +P
Sbjct: 133 EKIDTLGIYGKVNIHSIGF-------SFSSDLQSTQASSLELTE---ISRENVPKSG--T 180
Query: 631 PVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSG--SDIAFHLNPRFKENAVV 804
P L +PF A + + P ++++V G + +A+SF ++L +G DIA HLNPR A V
Sbjct: 181 PQLRLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFV 240
Query: 805 RNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHLFEYYHRLKHLPT 984
RN+ + SWG EER + PFS G F + I C+ F+VAV+G H EY HR K L +
Sbjct: 241 RNSFLQESWGEEERNI-TSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSS 299
Query: 985 INS 993
I++
Sbjct: 300 IDT 302
>ref|NP_006490.3| galectin-8 isoform a [Homo sapiens].
Length = 359
Score = 186 bits (471), Expect = 4e-47
Identities = 121/335 (36%), Positives = 165/335 (49%), Gaps = 37/335 (11%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++PF G I L G I I G V S RF V+LQ G S D+AFHFNPRF+
Sbjct: 14 NPVIPFVGTIPDQLDPGTLIVIRGHV-PSDADRFQVDLQNGSSMKPRADVAFHFNPRFKR 72
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
G +VCNT N WG EE PF+R FE+ +V +FQV VNG+ + Y HR+
Sbjct: 73 AGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGP 132
Query: 451 HRVDTISVTGIVQLSYISF------------------------------QPPGRWPANSA 540
++DT+ + G V + I F Q P + +
Sbjct: 133 EKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGTPQLPSNRGGDIS 192
Query: 541 PITQTVIHT--VQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTIL 714
I ++T ST IPPM Y + LP + P G P ++++V G +
Sbjct: 193 KIAPRTVYTKSKDSTVNHTLTCTKIPPMNYVSKRLPFAARLNTPMG--PGRTVVVKGEVN 250
Query: 715 PSAQSFYINLRSG--SDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSF 888
+A+SF ++L +G DIA HLNPR A VRN+ + SWG EER + PFS G F
Sbjct: 251 ANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNI-TSFPFSPGMYF 309
Query: 889 LVWILCESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
+ I C+ F+VAV+G H EY HR K L +I++
Sbjct: 310 EMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDT 344
Score = 63.5 bits (153), Expect = 3e-10
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Frame = +1
Query: 94 YMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEEG 273
Y++ +PF + + G + + G V ++ S F V+L G S DIA H NPR
Sbjct: 222 YVSKRLPFAARLNTPMGPGRTVVVKGEVNANAKS-FNVDLLAGKS-KDIALHLNPRLNIK 279
Query: 274 GYVVCNTKQNGIWGPEERKM-QMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRV-P 447
+V + Q WG EER + PF G FE+ +F+V VNG ++Y HR
Sbjct: 280 AFVRNSFLQES-WGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKE 338
Query: 448 FHRVDTISVTGIVQL 492
+DT+ + G + L
Sbjct: 339 LSSIDTLEINGDIHL 353
>ref|NP_963839.1| galectin-8 isoform a [Homo sapiens].
Length = 359
Score = 186 bits (471), Expect = 4e-47
Identities = 121/335 (36%), Positives = 165/335 (49%), Gaps = 37/335 (11%)
Frame = +1
Query: 100 NPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDN---DIAFHFNPRFEE 270
NP++PF G I L G I I G V S RF V+LQ G S D+AFHFNPRF+
Sbjct: 14 NPVIPFVGTIPDQLDPGTLIVIRGHV-PSDADRFQVDLQNGSSMKPRADVAFHFNPRFKR 72
Query: 271 GGYVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRVPF 450
G +VCNT N WG EE PF+R FE+ +V +FQV VNG+ + Y HR+
Sbjct: 73 AGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGP 132
Query: 451 HRVDTISVTGIVQLSYISF------------------------------QPPGRWPANSA 540
++DT+ + G V + I F Q P + +
Sbjct: 133 EKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGTPQLPSNRGGDIS 192
Query: 541 PITQTVIHT--VQSTPGQMFPNPMIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTIL 714
I ++T ST IPPM Y + LP + P G P ++++V G +
Sbjct: 193 KIAPRTVYTKSKDSTVNHTLTCTKIPPMNYVSKRLPFAARLNTPMG--PGRTVVVKGEVN 250
Query: 715 PSAQSFYINLRSG--SDIAFHLNPRFKENAVVRNTQIGSSWGPEERGLPRKMPFSRGQSF 888
+A+SF ++L +G DIA HLNPR A VRN+ + SWG EER + PFS G F
Sbjct: 251 ANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNI-TSFPFSPGMYF 309
Query: 889 LVWILCESHCFQVAVDGQHLFEYYHRLKHLPTINS 993
+ I C+ F+VAV+G H EY HR K L +I++
Sbjct: 310 EMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDT 344
Score = 63.5 bits (153), Expect = 3e-10
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Frame = +1
Query: 94 YMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHSDNDIAFHFNPRFEEG 273
Y++ +PF + + G + + G V ++ S F V+L G S DIA H NPR
Sbjct: 222 YVSKRLPFAARLNTPMGPGRTVVVKGEVNANAKS-FNVDLLAGKS-KDIALHLNPRLNIK 279
Query: 274 GYVVCNTKQNGIWGPEERKM-QMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQYTHRV-P 447
+V + Q WG EER + PF G FE+ +F+V VNG ++Y HR
Sbjct: 280 AFVRNSFLQES-WGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKE 338
Query: 448 FHRVDTISVTGIVQL 492
+DT+ + G + L
Sbjct: 339 LSSIDTLEINGDIHL 353
>ref|NP_001136007.1| galectin-12 isoform 1 [Homo sapiens].
Length = 337
Score = 120 bits (301), Expect = 2e-27
Identities = 87/292 (29%), Positives = 138/292 (47%), Gaps = 4/292 (1%)
Frame = +1
Query: 85 QAPYMNPMVPFTGMIQGGLQDGLQITINGTVLMSSGSRFTVNLQTGHS---DNDIAFHFN 255
Q P +P+VP+ I GGL G + + G V + + SRF V+ Q G S DIAFHFN
Sbjct: 39 QPPVFHPVVPYVTTIFGGLHAGKMVMLQGVVPLDAHSRFQVDFQCGCSLCPRPDIAFHFN 98
Query: 256 PRFEEGG-YVVCNTKQNGIWGPEERKMQMPFQRGHPFELSFLVQSSQFQVTVNGRLFVQY 432
PRF +V+CNT G W E R + +RG F + FL + + +V+VNG+ F+ +
Sbjct: 99 PRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHF 158
Query: 433 THRVPFHRVDTISVTGIVQLSYISFQPPGRWPANSAPITQTVIHTVQSTPGQMFPNPMIP 612
+R+P VDT+ + G + + + F N P + P
Sbjct: 159 RYRLPLSHVDTLGIFGDILVEAVGF-------LNINPFVE-----------GSREYPAGH 200
Query: 613 PMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQSFYINLRSGSDIAFHLNPRFKE 792
P +P L +P ++P GL P + I+V G +L + F ++LR D A H +
Sbjct: 201 PFLLMSPRLEVPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSLR---DQAAHAPVTLRA 257
Query: 793 NAVVRNTQIGSSWGPEERGLPRKMPFSRGQSFLVWILCESHCFQVAVDGQHL 948
+ R S WG +++ + F + F V +L + ++A++GQ L
Sbjct: 258 SFADRTLAWISRWG-QKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNGQGL 308
Score = 67.0 bits (162), Expect = 3e-11
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Frame = +1
Query: 565 TVQSTPGQMFPNP----MIPPMAYPNPVLPIPFFASIPGGLYPSKSIMVSGTILPSAQS- 729
TV S ++ P P + PP+ +P +P+ +I GGL+ K +M+ G + A S
Sbjct: 21 TVMSPGEKLDPIPDSFILQPPVFHP----VVPYVTTIFGGLHAGKMVMLQGVVPLDAHSR 76
Query: 730 FYINLRSGS------DIAFHLNPRFKENA--VVRNTQIGSSWGPEERGLPRKMPFSRGQS 885
F ++ + G DIAFH NPRF V+ NT G W E R + RG S
Sbjct: 77 FQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARW--PHLALRRGSS 134
Query: 886 FLVWILCESHCFQVAVDGQHLFEYYHR--LKHLPTI 987
FL+ L + +V+V+GQH + +R L H+ T+
Sbjct: 135 FLILFLFGNEEVKVSVNGQHFLHFRYRLPLSHVDTL 170
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,983,766
Number of extensions: 1352023
Number of successful extensions: 6442
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 6259
Number of HSP's successfully gapped: 45
Length of query: 331
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 228
Effective length of database: 14,901,872
Effective search space: 3397626816
Effective search space used: 3397626816
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008456
(993 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 404 e-110
>Sscrofa_Chr12
|| Length = 63588571
Score = 404 bits (204), Expect = e-110
Identities = 207/208 (99%)
Strand = Plus / Plus
Query: 196 aggtttactgtgaacttgcagaccggccacagtgacaatgacattgccttccacttcaac 255
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 46009315 aggtttactgtgaacttgcagaccggccacagggacaatgacattgccttccacttcaac 46009374
Query: 256 cctcggttcgaagagggcggctacgtggtctgcaacacgaagcagaatggaatctggggg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46009375 cctcggttcgaagagggcggctacgtggtctgcaacacgaagcagaatggaatctggggg 46009434
Query: 316 cctgaggagaggaagatgcaaatgcccttccagcgcggacatccatttgagctcagcttc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46009435 cctgaggagaggaagatgcaaatgcccttccagcgcggacatccatttgagctcagcttc 46009494
Query: 376 ctggtccagagctcgcagttccaggtga 403
||||||||||||||||||||||||||||
Sbjct: 46009495 ctggtccagagctcgcagttccaggtga 46009522
Score = 333 bits (168), Expect = 1e-88
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 727 agtttctacatcaacttgcgctcggggagtgacatcgccttccacctgaatccccgcttc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46015882 agtttctacatcaacttgcgctcggggagtgacatcgccttccacctgaatccccgcttc 46015941
Query: 787 aaggagaacgcggtggtccgcaacacgcagatcggcagctcctgggggcctgaggagcga 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46015942 aaggagaacgcggtggtccgcaacacgcagatcggcagctcctgggggcctgaggagcga 46016001
Query: 847 ggcctgccccggaagatgcccttctccagaggccagagcttcttggtg 894
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46016002 ggcctgccccggaagatgcccttctccagaggccagagcttcttggtg 46016049
Score = 218 bits (110), Expect = 4e-54
Identities = 113/114 (99%)
Strand = Plus / Plus
Query: 397 caggtgacagtgaacgggaggctctttgtgcagtacacacaccgcgtgcccttccaccgc 456
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46010702 caggtgacagtgaacgggaggctctttgtgcagtacacacaccgcgtgcccttccaccgg 46010761
Query: 457 gtggacaccatctccgtgacaggcatcgtccagctgtcctacatcagcttccag 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46010762 gtggacaccatctccgtgacaggcatcgtccagctgtcctacatcagcttccag 46010815
Score = 208 bits (105), Expect = 4e-51
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 ctcctccccggtgcagaggccggggcgtgcagagcggcaggcagtggtcacagaggcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46002220 ctcctccccggtgcagaggccggggcgtgcagagcggcaggcagtggtcacagaggcggt 46002279
Query: 61 ggagcgatggccttcagcggcgcccaggctccctacatgaacccg 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46002280 ggagcgatggccttcagcggcgcccaggctccctacatgaacccg 46002324
Score = 188 bits (95), Expect = 4e-45
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 105 gatggtccccttcacagggatgatccaagggggcctccaggacggacttcagatcaccat 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46006405 gatggtccccttcacagggatgatccaagggggcctccaggacggacttcagatcaccat 46006464
Query: 165 caatgggaccgttctcatgtccagtggaagcaggt 199
|||||||||||||||||||||||||||||||||||
Sbjct: 46006465 caatgggaccgttctcatgtccagtggaagcaggt 46006499
Score = 188 bits (95), Expect = 4e-45
Identities = 101/103 (98%)
Strand = Plus / Plus
Query: 891 ggtgtggatcctctgtgaaagccactgctttcaggtggccgtggacggtcagcacctatt 950
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 46020675 ggtgtggatcctctgtgaaagccactgcttcaaggtggccgtggacggtcagcacctatt 46020734
Query: 951 tgaatactaccaccgcctgaagcacctgcccaccatcaactcc 993
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46020735 tgaatactaccaccgcctgaagcacctgcccaccatcaactcc 46020777
Score = 176 bits (89), Expect = 2e-41
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 640 cccatccctttcttcgcctccatcccgggcggcctgtacccctccaagagcatcatggtg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46015698 cccatccctttcttcgcctccatcccgggcggcctgtacccctccaagagcatcatggtg 46015757
Query: 700 tcgggcaccatcctgcccagcgctcagag 728
|||||||||||||||||||||||||||||
Sbjct: 46015758 tcgggcaccatcctgcccagcgctcagag 46015786
Score = 93.7 bits (47), Expect = 2e-16
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 547 actcaaaccgtcatccacactgtgcagagcacccctggacagatgttccct 597
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46014446 actcaaactgtcatccacactgtgcagagcacccctggacagatgttccct 46014496
Score = 83.8 bits (42), Expect = 2e-13
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 598 aatcccatgatcccacctatggcatatcctaacccagtcctt 639
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46015155 aatcccatgatcccacctatggcatatcctaacccagtcctt 46015196
Score = 81.8 bits (41), Expect = 7e-13
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 506 tccagcctccaggtcgctggccggccaactcggctcccatt 546
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 46013818 tccagcctccaggtcgctggccggccaactcggctcccatt 46013858
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 23,634,477
Number of extensions: 145
Number of successful extensions: 145
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 145
Number of HSP's successfully gapped: 10
Length of query: 993
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 972
Effective length of database: 2,808,413,156
Effective search space: 2729777587632
Effective search space used: 2729777587632
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)