Animal-Genome cDNA 20110601C-008478


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008478
         (2788 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001073696.1| ADP-ribosylation factor GTPase-activating pr...   875   0.0  
Alignment   gi|NP_001069442.1| ADP-ribosylation factor GTPase-activating pr...   458   e-128
Alignment   gi|NP_001068732.1| ADP-ribosylation factor GTPase-activating pr...   103   6e-22
Alignment   gi|NP_001069138.1| stromal membrane-associated protein 2 [Bos t...    89   3e-17
Alignment   gi|XP_002690053.1| PREDICTED: small ArfGAP 1 isoform 1 [Bos tau...    85   3e-16
Alignment   gi|XP_002690054.1| PREDICTED: small ArfGAP 1 isoform 2 [Bos tau...    82   3e-15
Alignment   gi|NP_001077156.1| arf-GAP with coiled-coil, ANK repeat and PH ...    77   6e-14
Alignment   gi|NP_787015.1| arf-GAP with SH3 domain, ANK repeat and PH doma...    77   8e-14
Alignment   gi|NP_001178968.1| arf-GAP with GTPase, ANK repeat and PH domai...    74   7e-13
Alignment   gi|XP_002687603.1| PREDICTED: ArfGAP with GTPase domain, ankyri...    74   7e-13

>ref|NP_001073696.1| ADP-ribosylation factor GTPase-activating protein 2 [Bos taurus].
          Length = 520

 Score =  875 bits (2262), Expect = 0.0
 Identities = 446/520 (85%), Positives = 457/520 (87%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAAEP+KTEIQT FKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAAEPNKTEIQTFFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDS W+WFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSTWSWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAALARHGTDLW D++S+APSHSPEKK+SDFF EHTQPPAW+AP TDLSETQQPAPSA
Sbjct: 121  LGSAALARHGTDLWTDSVSTAPSHSPEKKESDFFLEHTQPPAWNAPVTDLSETQQPAPSA 180

Query: 570  ESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQSF 749
            ESSGLAQPEHGPNMDLLGTSPKASLE KTSLI                    QKVSSQSF
Sbjct: 181  ESSGLAQPEHGPNMDLLGTSPKASLEPKTSLIGKKKPAAAKKGLGAKKGLGAQKVSSQSF 240

Query: 750  SEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 929
            SEIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE
Sbjct: 241  SEIERQAQVAEKLREQQVADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 300

Query: 930  QAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN 1109
            QAERLGMG             EMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN
Sbjct: 301  QAERLGMGLVSRSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN 360

Query: 1110 PFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEA 1289
            PFSLGESFGSRWD D AWGMDRMEEKEPEVT+SSIRP+SERVTNRREVESRSSGLESSEA
Sbjct: 361  PFSLGESFGSRWDTDTAWGMDRMEEKEPEVTVSSIRPVSERVTNRREVESRSSGLESSEA 420

Query: 1290 RQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLG 1469
            RQKFAGAKAISSDMFFGREVD+EYEARSRLQQL         DLFGD+DGAHGAGSVSLG
Sbjct: 421  RQKFAGAKAISSDMFFGREVDTEYEARSRLQQLSGSSAISSSDLFGDVDGAHGAGSVSLG 480

Query: 1470 NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 481  NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 520


>ref|NP_001069442.1| ADP-ribosylation factor GTPase-activating protein 3 [Bos taurus].
          Length = 517

 Score =  458 bits (1179), Expect = e-128
 Identities = 256/527 (48%), Positives = 339/527 (64%), Gaps = 11/527 (2%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I T+FKRLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGNANA++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCDTNDTNAKYNSRAAQLYRERIKALAS 122

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAWSA--PATDLSETQQPA 560
             A  +HGTDLW+D+    PS SP  K+ DFF+ H  P      W++  P   L+     A
Sbjct: 123  QATRKHGTDLWLDSCVVPPS-SPPPKEEDFFASHASPEVSSTGWASAQPEPSLTPRNVDA 181

Query: 561  PSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSS 740
            P+A S G+  PE GP+++ L    KA++   +S+I                    QK+S+
Sbjct: 182  PAASSEGV--PEQGPSVEGLNVPTKAAVGEVSSIIKKKPNQAKRGLGAKKGSLGAQKLSN 239

Query: 741  QSFSEIERQAQVAEKLR-XXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEG 917
              F+EIE+QAQ  +K+               S+V+S+RLAY++L+I  KK+EK   N+ G
Sbjct: 240  TCFNEIEKQAQAVDKMNAQEDLLSRAAPKEESIVSSLRLAYKDLEIQMKKDEK--MNMSG 297

Query: 918  KKREQAERLGMG-XXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPP 1094
            KK+ ++ERLGMG              +MQ IEQETP++AK  +   D  DD  ++ +   
Sbjct: 298  KKKAESERLGMGFGNSRSGISHSVTSDMQTIEQETPITAKPRKKYGDDSDD--SYFTSSS 355

Query: 1095 KYKDNPFSLGESFGSRWD--ADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSS 1268
            ++ D P  L  S  S WD  +D+ W  + +++ +P   I      ++R T RR+ +S  +
Sbjct: 356  RFFDEPMELRSSSFSSWDDSSDSYWKKETIKDTDP---IPKNTGYTDRPTTRRKPDSEPA 412

Query: 1269 GLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHG 1448
               + EA++KF   KAISSDM+FGR+  ++YEAR+RL++L         DLF D      
Sbjct: 413  E-NTDEAQKKFGNVKAISSDMYFGRQAKADYEARARLERLSASSSISSADLF-DEQRKQT 470

Query: 1449 AGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGS 1586
            AGS +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QDRYGS
Sbjct: 471  AGSYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQDRYGS 517


>ref|NP_001068732.1| ADP-ribosylation factor GTPase-activating protein 1 [Bos taurus].
          Length = 405

 Score =  103 bits (258), Expect = 6e-22
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
 Frame = +3

Query: 66  LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW 245
           + K +RA   N  CF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVTMD-KW 67

Query: 246 NWFQLRCMQVGGNANATAFF--RQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHG 419
              +L  M+ GGNA    F   ++          KY+SRAA ++R+++     AALA  G
Sbjct: 68  KDVELEKMKAGGNARFREFLESQEDYDPCWSLQEKYSSRAAALFRDRV-----AALA-EG 121

Query: 420 TDLWIDNMSSAPSHSPEKKDSDFFSEH 500
            + W    S A S +P +  +   S H
Sbjct: 122 KE-WSLESSPAQSWTPPQPRTLLSSAH 147


>ref|NP_001069138.1| stromal membrane-associated protein 2 [Bos taurus].
          Length = 429

 Score = 88.6 bits (218), Expect = 3e-17
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 20/218 (9%)
 Frame = +3

Query: 60  QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS 239
           Q +   L     NK C DC +K P WAS   GVF+CI C+G+HR+LGVH+S ++S  LD 
Sbjct: 13  QAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD- 71

Query: 240 NWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKI-------RQLGS 398
            W   Q++CMQ  GN  A   +  +         + +       R+K        R L  
Sbjct: 72  QWTQEQIQCMQEMGNGKANRLYEAY-LPETFRRPQIDHAVEGFIRDKYEKKKYMDRSLDI 130

Query: 399 AALARHGTDLWIDNMSSAPSHS-----------PEKKDSDFFSEHTQPPAWSAPATDLSE 545
            A  +   + W      AP              P+KK+       T P +  AP  DL  
Sbjct: 131 NAFRKEKDNKWKRGSEPAPEKKMEPVVFEKVKMPQKKEDPQLPRKTSPKS-KAPVVDLLG 189

Query: 546 TQQPAPSAESSGLAQPEHGPNMDLLG--TSPKASLELK 653
              P   + ++G        ++DLL   +SP +S+  K
Sbjct: 190 LDAPVSCSIANGKTSNTLEKDLDLLASVSSPSSSVSRK 227


>ref|XP_002690053.1| PREDICTED: small ArfGAP 1 isoform 1 [Bos taurus].
          Length = 444

 Score = 85.1 bits (209), Expect = 3e-16
 Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
 Frame = +3

Query: 36  AEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSF 215
           A+    + Q +  +L     NK C DC AK P WAS   GVF+CI C+G+HR+LGVH+S 
Sbjct: 10  AQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISR 69

Query: 216 IRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLG 395
           ++S  LD  W   Q++CMQ  GN  A   +        +AN   N R  Q      + + 
Sbjct: 70  VKSVNLD-QWTPEQIQCMQDMGNTKARLLY--------EANLPENFRRPQ----TDQAVE 116

Query: 396 SAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPAT----DLSETQQPAP 563
                ++    + D  + A ++  ++K  +   +  +P   + P T       E QQ  P
Sbjct: 117 FFIRDKYEKKKYYDKNAIAITNKEKEKKKEEKKKEKEPEKPTKPLTTEKLQKKEDQQLEP 176

Query: 564 SAESSGLAQPEHGPNMDLLG 623
              +S     E  P +DLLG
Sbjct: 177 KKSTSPKKAAE--PTVDLLG 194


>ref|XP_002690054.1| PREDICTED: small ArfGAP 1 isoform 2 [Bos taurus].
          Length = 471

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 44/110 (40%), Positives = 59/110 (53%)
 Frame = +3

Query: 36  AEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSF 215
           A+    + Q +  +L     NK C DC AK P WAS   GVF+CI C+G+HR+LGVH+S 
Sbjct: 10  AQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISR 69

Query: 216 IRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQ 365
           ++S  LD  W   Q++CMQ  GN  A   +        +AN   N R  Q
Sbjct: 70  VKSVNLD-QWTPEQIQCMQDMGNTKARLLY--------EANLPENFRRPQ 110


>ref|NP_001077156.1| arf-GAP with coiled-coil, ANK repeat and PH domain-containing
           protein 3 [Bos taurus].
          Length = 833

 Score = 77.4 bits (189), Expect = 6e-14
 Identities = 37/82 (45%), Positives = 51/82 (62%)
 Frame = +3

Query: 60  QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS 239
           +++ +R++ +  N  C DCG  +P WASI  GV LCI+CSG+HRSLGVH S +RS  LDS
Sbjct: 403 ESVLQRVQNVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDS 462

Query: 240 NWNWFQLRCMQVGGNANATAFF 305
            W    L+ M   GN+     +
Sbjct: 463 -WEPELLKLMCELGNSTVNQIY 483


>ref|NP_787015.1| arf-GAP with SH3 domain, ANK repeat and PH domain-containing
           protein 1 [Bos taurus].
          Length = 1129

 Score = 77.0 bits (188), Expect = 8e-14
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +3

Query: 15  WEGEKMAAEPSKTEI-QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHR 191
           + GE+ A E S  E+ + + + ++ +P N  C DCG+  P+W S   G+  CI+CSG+HR
Sbjct: 426 FRGEQSAGESSLEELTKAIIEDVQRLPGNDVCCDCGSAEPTWLSTNLGILTCIECSGIHR 485

Query: 192 SLGVHLSFIRSTELDSNWNWFQLRCMQVGGNA 287
            +GVH+S I+S ELD       L    VG N+
Sbjct: 486 EMGVHISRIQSLELDKLGTSELLLAKNVGNNS 517


>ref|NP_001178968.1| arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
            [Bos taurus].
          Length = 1188

 Score = 73.9 bits (180), Expect = 7e-13
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
 Frame = +3

Query: 39   EPSKTEIQT-------LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSL 197
            E SK +++T         + +R    N  C DCGA NP+WAS+  G  +CI+CSG+HR+L
Sbjct: 913  ESSKVKLRTDSQSEAVAIQAIRNAKGNSICVDCGAPNPTWASLNLGALICIECSGIHRNL 972

Query: 198  GVHLSFIRSTELD 236
            G HLS +RS +LD
Sbjct: 973  GTHLSRVRSLDLD 985


>ref|XP_002687603.1| PREDICTED: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
            [Bos taurus].
          Length = 1188

 Score = 73.9 bits (180), Expect = 7e-13
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
 Frame = +3

Query: 39   EPSKTEIQT-------LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSL 197
            E SK +++T         + +R    N  C DCGA NP+WAS+  G  +CI+CSG+HR+L
Sbjct: 913  ESSKVKLRTDSQSEAVAIQAIRNAKGNSICVDCGAPNPTWASLNLGALICIECSGIHRNL 972

Query: 198  GVHLSFIRSTELD 236
            G HLS +RS +LD
Sbjct: 973  GTHLSRVRSLDLD 985


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 117,939,750
Number of extensions: 3731274
Number of successful extensions: 16923
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 16828
Number of HSP's successfully gapped: 37
Length of query: 929
Length of database: 17,681,374
Length adjustment: 112
Effective length of query: 817
Effective length of database: 13,975,518
Effective search space: 11417998206
Effective search space used: 11417998206
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008478
         (2788 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_540747.2| PREDICTED: similar to zinc finger protein 289, ...   855   0.0  
Alignment   gi|XP_861391.1| PREDICTED: similar to zinc finger protein 289, ...   845   0.0  
Alignment   gi|XP_861361.1| PREDICTED: similar to zinc finger protein 289, ...   841   0.0  
Alignment   gi|XP_861332.1| PREDICTED: similar to zinc finger protein 289, ...   822   0.0  
Alignment   gi|XP_857369.1| PREDICTED: similar to ADP-ribosylation factor G...   437   e-122
Alignment   gi|XP_848847.1| PREDICTED: similar to ADP-ribosylation factor G...   437   e-122
Alignment   gi|XP_857414.1| PREDICTED: similar to ADP-ribosylation factor G...   432   e-121
Alignment   gi|XP_857331.1| PREDICTED: similar to ADP-ribosylation factor G...   430   e-120
Alignment   gi|XP_531706.2| PREDICTED: similar to ADP-ribosylation factor G...   426   e-119
Alignment   gi|XP_861308.1| PREDICTED: similar to zinc finger protein 289, ...   329   8e-90

>ref|XP_540747.2| PREDICTED: similar to zinc finger protein 289, ID1 regulated isoform
            1 [Canis familiaris].
          Length = 520

 Score =  855 bits (2208), Expect = 0.0
 Identities = 438/520 (84%), Positives = 449/520 (86%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAAEPSKTEIQTLFKRLR IPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAAEPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTA+DANTKYNSRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAALARHGTDLWIDN+SSAPSHSPEKKDSDFF+EHTQPPAW   A D +ETQQ  PS 
Sbjct: 121  LGSAALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQPPAWKVQAPDPAETQQLTPST 180

Query: 570  ESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQSF 749
            E S LAQPEH PNMDLLGTSPKASLE +TSLI                    QKVSSQSF
Sbjct: 181  EISSLAQPEHSPNMDLLGTSPKASLEPRTSLIGKKKPAAAKKGLGAKKGLGAQKVSSQSF 240

Query: 750  SEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 929
            SEIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE
Sbjct: 241  SEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 300

Query: 930  QAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN 1109
            QAERLGMG             EMQVIEQETPVSAKSSR+QLDLFDDVGTFASGPPKYKDN
Sbjct: 301  QAERLGMGLVSRSSISHSVLSEMQVIEQETPVSAKSSRAQLDLFDDVGTFASGPPKYKDN 360

Query: 1110 PFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEA 1289
            PFSLGESF SRWD DAAWG+DRMEEKEPEVTISSIRPISERVTNRREVESR+SGLESSEA
Sbjct: 361  PFSLGESFSSRWDTDAAWGVDRMEEKEPEVTISSIRPISERVTNRREVESRNSGLESSEA 420

Query: 1290 RQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLG 1469
            RQKFAGAKAISSDMFFGREVD+E+EARSRLQQL         DLFGD+DGAHG GSVSLG
Sbjct: 421  RQKFAGAKAISSDMFFGREVDAEHEARSRLQQLSGSSAISSSDLFGDVDGAHGVGSVSLG 480

Query: 1470 NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 481  NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 520


>ref|XP_861391.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated isoform
            8 [Canis familiaris].
          Length = 534

 Score =  845 bits (2184), Expect = 0.0
 Identities = 438/534 (82%), Positives = 449/534 (84%), Gaps = 14/534 (2%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAAEPSKTEIQTLFKRLR IPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAAEPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTA+DANTKYNSRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAALARHGTDLWIDN+SSAPSHSPEKKDSDFF+EHTQPPAW   A D +ETQQ  PS 
Sbjct: 121  LGSAALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQPPAWKVQAPDPAETQQLTPST 180

Query: 570  ESSGLAQPEHGPNMDLLGTSPKASLEL--------------KTSLIXXXXXXXXXXXXXX 707
            E S LAQPEH PNMDLLGTSPKASLE               +TSLI              
Sbjct: 181  EISSLAQPEHSPNMDLLGTSPKASLESMYLSPKGALPAREPRTSLIGKKKPAAAKKGLGA 240

Query: 708  XXXXXXQKVSSQSFSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKK 887
                  QKVSSQSFSEIERQAQVAEKLR             SMVASMRLAYQELQIDRKK
Sbjct: 241  KKGLGAQKVSSQSFSEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKK 300

Query: 888  EEKKLQNLEGKKREQAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDD 1067
            EEKKLQNLEGKKREQAERLGMG             EMQVIEQETPVSAKSSR+QLDLFDD
Sbjct: 301  EEKKLQNLEGKKREQAERLGMGLVSRSSISHSVLSEMQVIEQETPVSAKSSRAQLDLFDD 360

Query: 1068 VGTFASGPPKYKDNPFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRR 1247
            VGTFASGPPKYKDNPFSLGESF SRWD DAAWG+DRMEEKEPEVTISSIRPISERVTNRR
Sbjct: 361  VGTFASGPPKYKDNPFSLGESFSSRWDTDAAWGVDRMEEKEPEVTISSIRPISERVTNRR 420

Query: 1248 EVESRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFG 1427
            EVESR+SGLESSEARQKFAGAKAISSDMFFGREVD+E+EARSRLQQL         DLFG
Sbjct: 421  EVESRNSGLESSEARQKFAGAKAISSDMFFGREVDAEHEARSRLQQLSGSSAISSSDLFG 480

Query: 1428 DMDGAHGAGSVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            D+DGAHG GSVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 481  DVDGAHGVGSVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 534


>ref|XP_861361.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated isoform
            7 [Canis familiaris].
          Length = 525

 Score =  841 bits (2173), Expect = 0.0
 Identities = 435/525 (82%), Positives = 447/525 (85%), Gaps = 5/525 (0%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAAEPSKTEIQTLFKRLR IPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAAEPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTA+DANTKYNSRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAALARHGTDLWIDN+SSAPSHSPEKKDSDFF+EHTQPPAW   A D +ETQQ  PS 
Sbjct: 121  LGSAALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQPPAWKVQAPDPAETQQLTPST 180

Query: 570  ESSGLAQP-----EHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKV 734
            E S LA+        GPNMDLLGTSPKASLE +TSLI                    QKV
Sbjct: 181  EISSLAREFSPDFNQGPNMDLLGTSPKASLEPRTSLIGKKKPAAAKKGLGAKKGLGAQKV 240

Query: 735  SSQSFSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLE 914
            SSQSFSEIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEEKKLQNLE
Sbjct: 241  SSQSFSEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLE 300

Query: 915  GKKREQAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPP 1094
            GKKREQAERLGMG             EMQVIEQETPVSAKSSR+QLDLFDDVGTFASGPP
Sbjct: 301  GKKREQAERLGMGLVSRSSISHSVLSEMQVIEQETPVSAKSSRAQLDLFDDVGTFASGPP 360

Query: 1095 KYKDNPFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGL 1274
            KYKDNPFSLGESF SRWD DAAWG+DRMEEKEPEVTISSIRPISERVTNRREVESR+SGL
Sbjct: 361  KYKDNPFSLGESFSSRWDTDAAWGVDRMEEKEPEVTISSIRPISERVTNRREVESRNSGL 420

Query: 1275 ESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAG 1454
            ESSEARQKFAGAKAISSDMFFGREVD+E+EARSRLQQL         DLFGD+DGAHG G
Sbjct: 421  ESSEARQKFAGAKAISSDMFFGREVDAEHEARSRLQQLSGSSAISSSDLFGDVDGAHGVG 480

Query: 1455 SVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            SVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 481  SVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 525


>ref|XP_861332.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated isoform
            6 [Canis familiaris].
          Length = 522

 Score =  822 bits (2124), Expect = 0.0
 Identities = 430/532 (80%), Positives = 443/532 (83%), Gaps = 12/532 (2%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAAEPSKTEIQTLFKRLR IPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAAEPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTA+DANTKYNSRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAALARHGTDLWIDN+SSAPSHSPEKKDSDFF+EHTQ          ++ETQQ  PS 
Sbjct: 121  LGSAALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQ----------VTETQQLTPST 170

Query: 570  ESSGL------------AQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXX 713
            E S L             +PEH PNMDLLGTSPKASLE +TSLI                
Sbjct: 171  EISSLLCTLYLNSTIASTEPEHSPNMDLLGTSPKASLEPRTSLIGKKKPAAAKKGLGAKK 230

Query: 714  XXXXQKVSSQSFSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEE 893
                QKVSSQSFSEIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEE
Sbjct: 231  GLGAQKVSSQSFSEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKKEE 290

Query: 894  KKLQNLEGKKREQAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVG 1073
            KKLQNLEGKKREQAERLGMG             EMQVIEQETPVSAKSSR+QLDLFDDVG
Sbjct: 291  KKLQNLEGKKREQAERLGMGLVSRSSISHSVLSEMQVIEQETPVSAKSSRAQLDLFDDVG 350

Query: 1074 TFASGPPKYKDNPFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREV 1253
            TFASGPPKYKDNPFSLGESF SRWD DAAWG+DRMEEKEPEVTISSIRPISERVTNRREV
Sbjct: 351  TFASGPPKYKDNPFSLGESFSSRWDTDAAWGVDRMEEKEPEVTISSIRPISERVTNRREV 410

Query: 1254 ESRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDM 1433
            ESR+SGLESSEARQKFAGAKAISSDMFFGREVD+E+EARSRLQQL         DLFGD+
Sbjct: 411  ESRNSGLESSEARQKFAGAKAISSDMFFGREVDAEHEARSRLQQLSGSSAISSSDLFGDV 470

Query: 1434 DGAHGAGSVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            DGAHG GSVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 471  DGAHGVGSVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 522


>ref|XP_857369.1| PREDICTED: similar to ADP-ribosylation factor GTPase activating
            protein 3 isoform 4 [Canis familiaris].
          Length = 524

 Score =  437 bits (1123), Expect = e-122
 Identities = 247/534 (46%), Positives = 333/534 (62%), Gaps = 18/534 (3%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I ++F+RLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGNANA++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 122

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAWSAPATDLS----ETQQ 554
             A  +HGTDLW+D+    P  +P  K+ DFF+ H  P      W++   ++S       +
Sbjct: 123  QATRKHGTDLWLDS-CVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNVE 181

Query: 555  PAPSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKV 734
              P+    G   PE GP+++ L    KA+ E+ +S+I                    QKV
Sbjct: 182  TTPANNEGG---PEQGPSVEGLNAPTKAASEV-SSIIKKKPNQAKRGLGAKKGSLGAQKV 237

Query: 735  SSQSFSEIERQAQVAEKLR-XXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNL 911
            ++  F+EIE+QAQ  +K++              S+V+S+RLAY++L+I  KK+EK   N+
Sbjct: 238  TNTCFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEK--VNM 295

Query: 912  EGKKREQAERLGMG-XXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDD-----VG 1073
             GKK+ ++ERLGMG              +MQ IEQETP+ AK  +   D  DD       
Sbjct: 296  SGKKKIESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDDSYFTSSS 355

Query: 1074 TFASGPPKYKDNPFSLGESFGSRWD--ADAAWGMDRMEEKEPEVTISSIRPISERVTNRR 1247
            +++ G  +Y D P     +  S WD  +++ W  + +++ +   TI      S+R T RR
Sbjct: 356  SWSQGSSEYLDEPMEFRSNSFSSWDDSSESYWKKETIKDTD---TILKTTGYSDRSTARR 412

Query: 1248 EVESRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFG 1427
            + +       + EA++KF   KAISSDM+FGR+  ++YE R+RL++L         DLF 
Sbjct: 413  KPDYEPVE-NTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLF- 470

Query: 1428 DMDGAHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGS 1586
            D      AGS +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QDRYGS
Sbjct: 471  DEQRKQTAGSYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQDRYGS 524


>ref|XP_848847.1| PREDICTED: similar to ADP-ribosylation factor GTPase activating
            protein 3 isoform 2 [Canis familiaris].
          Length = 517

 Score =  437 bits (1123), Expect = e-122
 Identities = 246/529 (46%), Positives = 332/529 (62%), Gaps = 13/529 (2%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I ++F+RLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGNANA++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 122

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAWSAPATDLS----ETQQ 554
             A  +HGTDLW+D+    P  +P  K+ DFF+ H  P      W++   ++S       +
Sbjct: 123  QATRKHGTDLWLDS-CVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNVE 181

Query: 555  PAPSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKV 734
              P+    G   PE GP+++ L    KA+ E+ +S+I                    QKV
Sbjct: 182  TTPANNEGG---PEQGPSVEGLNAPTKAASEV-SSIIKKKPNQAKRGLGAKKGSLGAQKV 237

Query: 735  SSQSFSEIERQAQVAEKLR-XXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNL 911
            ++  F+EIE+QAQ  +K++              S+V+S+RLAY++L+I  KK+EK   N+
Sbjct: 238  TNTCFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEK--VNM 295

Query: 912  EGKKREQAERLGMG-XXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASG 1088
             GKK+ ++ERLGMG              +MQ IEQETP+ AK  +   D  DD  ++ + 
Sbjct: 296  SGKKKIESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDD--SYFTS 353

Query: 1089 PPKYKDNPFSLGESFGSRWD--ADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESR 1262
              +Y D P     +  S WD  +++ W  + +++ +   TI      S+R T RR+ +  
Sbjct: 354  SSRYLDEPMEFRSNSFSSWDDSSESYWKKETIKDTD---TILKTTGYSDRSTARRKPDYE 410

Query: 1263 SSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGA 1442
                 + EA++KF   KAISSDM+FGR+  ++YE R+RL++L         DLF D    
Sbjct: 411  PVE-NTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLF-DEQRK 468

Query: 1443 HGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGS 1586
              AGS +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QDRYGS
Sbjct: 469  QTAGSYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQDRYGS 517


>ref|XP_857414.1| PREDICTED: similar to ADP-ribosylation factor GTPase activating
            protein 3 isoform 5 [Canis familiaris].
          Length = 528

 Score =  432 bits (1112), Expect = e-121
 Identities = 248/538 (46%), Positives = 331/538 (61%), Gaps = 22/538 (4%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I ++F+RLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGNANA++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 122

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAWSAPATDLS----ETQQ 554
             A  +HGTDLW+D+    P  +P  K+ DFF+ H  P      W++   ++S       +
Sbjct: 123  QATRKHGTDLWLDS-CVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNVE 181

Query: 555  PAPSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKV 734
              P+    G   PE GP+++ L    KA+ E+ +S+I                    QKV
Sbjct: 182  TTPANNEGG---PEQGPSVEGLNAPTKAASEV-SSIIKKKPNQAKRGLGAKKGSLGAQKV 237

Query: 735  SSQSFSEIERQAQVAEKLR-XXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNL 911
            ++  F+EIE+QAQ  +K++              S+V+S+RLAY++L+I  KK+EK   N+
Sbjct: 238  TNTCFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEK--VNM 295

Query: 912  EGKKREQAERLGMG-XXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASG 1088
             GKK+ ++ERLGMG              +MQ IEQETP+ AK  +   D  DD    +S 
Sbjct: 296  SGKKKIESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDDSYFTSSS 355

Query: 1089 ---------PPKYKDNPFSLGESFGSRWD--ADAAWGMDRMEEKEPEVTISSIRPISERV 1235
                       KY D P     +  S WD  +++ W  + +++ +   TI      S+R 
Sbjct: 356  RLFPWSDAKSAKYLDEPMEFRSNSFSSWDDSSESYWKKETIKDTD---TILKTTGYSDRS 412

Query: 1236 TNRREVESRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXX 1415
            T RR+ +       + EA++KF   KAISSDM+FGR+  ++YE R+RL++L         
Sbjct: 413  TARRKPDYEPVE-NTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSA 471

Query: 1416 DLFGDMDGAHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGS 1586
            DLF D      AGS +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QDRYGS
Sbjct: 472  DLF-DEQRKQTAGSYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQDRYGS 528


>ref|XP_857331.1| PREDICTED: similar to ADP-ribosylation factor GTPase-activating
            protein 3 (ARF GAP 3) isoform 3 [Canis familiaris].
          Length = 517

 Score =  430 bits (1105), Expect = e-120
 Identities = 247/534 (46%), Positives = 332/534 (62%), Gaps = 18/534 (3%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I ++F+RLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGNANA++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 122

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAWSAPATDLS----ETQQ 554
             A  +HGTDLW+D+    P  +P  K+ DFF+ H  P      W++   ++S       +
Sbjct: 123  QATRKHGTDLWLDS-CVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNVE 181

Query: 555  PAPSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKV 734
              P+    G   PE GP+++ L    KA+ E+ +S+I                    QKV
Sbjct: 182  TTPANNEGG---PEQGPSVEGLNAPTKAASEV-SSIIKKKPNQAKRGLGAKKGSLGAQKV 237

Query: 735  SSQSFSEIERQAQVAEKLR-XXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNL 911
            ++  F+EIE+QAQ  +K++              S+V+S+RLAY++L+I  KK+EK   N+
Sbjct: 238  TNTCFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEK--VNM 295

Query: 912  EGKKREQAERLGMG-XXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASG 1088
             GKK+ ++ERLGMG              +MQ IEQETP+ AK  +   D  DD    +S 
Sbjct: 296  SGKKKIESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDDSYFTSSS 355

Query: 1089 -----PPKYKDNPFSLGESFGSRWD--ADAAWGMDRMEEKEPEVTISSIRPISERVTNRR 1247
                 P +++ N F       S WD  +++ W  + +++ +   TI      S+R T RR
Sbjct: 356  SCYYYPMEFRSNSF-------SSWDDSSESYWKKETIKDTD---TILKTTGYSDRSTARR 405

Query: 1248 EVESRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFG 1427
            + +       + EA++KF   KAISSDM+FGR+  ++YE R+RL++L         DLF 
Sbjct: 406  KPDYEPVE-NTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLF- 463

Query: 1428 DMDGAHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGS 1586
            D      AGS +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+QDRYGS
Sbjct: 464  DEQRKQTAGSYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQDRYGS 517


>ref|XP_531706.2| PREDICTED: similar to ADP-ribosylation factor GTPase activating
            protein 3 isoform 1 [Canis familiaris].
          Length = 542

 Score =  426 bits (1095), Expect = e-119
 Identities = 241/524 (45%), Positives = 327/524 (62%), Gaps = 13/524 (2%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I ++F+RLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILSIFRRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGNANA++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLAS 122

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAWSAPATDLS----ETQQ 554
             A  +HGTDLW+D+    P  +P  K+ DFF+ H  P      W++   ++S       +
Sbjct: 123  QATRKHGTDLWLDS-CVVPPLTPPPKEEDFFASHVSPEVSGTGWASAQPEVSSLPPRNVE 181

Query: 555  PAPSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKV 734
              P+    G   PE GP+++ L    KA+ E+ +S+I                    QKV
Sbjct: 182  TTPANNEGG---PEQGPSVEGLNAPTKAASEV-SSIIKKKPNQAKRGLGAKKGSLGAQKV 237

Query: 735  SSQSFSEIERQAQVAEKLR-XXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNL 911
            ++  F+EIE+QAQ  +K++              S+V+S+RLAY++L+I  KK+EK   N+
Sbjct: 238  TNTCFNEIEKQAQAVDKMKEQEDRLARAAPKEESIVSSLRLAYKDLEIQMKKDEK--VNM 295

Query: 912  EGKKREQAERLGMG-XXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASG 1088
             GKK+ ++ERLGMG              +MQ IEQETP+ AK  +   D  DD  ++ + 
Sbjct: 296  SGKKKIESERLGMGFGNCRSGISHSVTSDMQTIEQETPIVAKPRKKYSDDSDD--SYFTS 353

Query: 1089 PPKYKDNPFSLGESFGSRWD--ADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESR 1262
              +Y D P     +  S WD  +++ W  + +++ +   TI      S+R T RR+ +  
Sbjct: 354  SSRYLDEPMEFRSNSFSSWDDSSESYWKKETIKDTD---TILKTTGYSDRSTARRKPDYE 410

Query: 1263 SSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGA 1442
                 + EA++KF   KAISSDM+FGR+  ++YE R+RL++L         DLF D    
Sbjct: 411  PVE-NTDEAQKKFGNVKAISSDMYFGRQAQADYETRARLERLSASSSISSADLF-DEQRK 468

Query: 1443 HGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQ 1571
              AGS +L +VLPTA D+AQFKQGV+SVAGK++V ANGVM S+Q
Sbjct: 469  QTAGSYNLTSVLPTAPDMAQFKQGVRSVAGKLSVFANGVMTSIQ 512


>ref|XP_861308.1| PREDICTED: similar to zinc finger protein 289, ID1 regulated
           isoform 5 [Canis familiaris].
          Length = 183

 Score =  329 bits (844), Expect = 8e-90
 Identities = 157/165 (95%), Positives = 161/165 (97%), Gaps = 3/165 (1%)
 Frame = +3

Query: 30  MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
           MAAEPSKTEIQTLFKRLR IPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1   MAAEPSKTEIQTLFKRLRGIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210 SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
           SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTA+DANTKYNSRAAQMYREKIRQ
Sbjct: 61  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTASDANTKYNSRAAQMYREKIRQ 120

Query: 390 LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQ---PPA 515
           LGSAALARHGTDLWIDN+SSAPSHSPEKKDSDFF+EHTQ   PP+
Sbjct: 121 LGSAALARHGTDLWIDNVSSAPSHSPEKKDSDFFTEHTQNREPPS 165


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 122,919,706
Number of extensions: 3833965
Number of successful extensions: 17514
Number of sequences better than 1.0e-05: 42
Number of HSP's gapped: 17373
Number of HSP's successfully gapped: 42
Length of query: 929
Length of database: 18,874,504
Length adjustment: 112
Effective length of query: 817
Effective length of database: 15,140,872
Effective search space: 12370092424
Effective search space used: 12370092424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008478
         (2788 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003122862.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   905   0.0  
Alignment   gi|XP_003361175.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   895   0.0  
Alignment   gi|XP_003353922.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   666   0.0  
Alignment   gi|XP_003126029.2| PREDICTED: ADP-ribosylation factor GTPase-ac...   287   2e-77
Alignment   gi|XP_003355371.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   167   4e-41
Alignment   gi|XP_003355370.1| PREDICTED: ADP-ribosylation factor GTPase-ac...    93   7e-19
Alignment   gi|NP_001121936.1| stromal membrane-associated protein 2 [Sus s...    90   6e-18
Alignment   gi|XP_003121323.2| PREDICTED: stromal membrane-associated prote...    86   1e-16
Alignment   gi|XP_003358807.1| PREDICTED: arf-GAP with coiled-coil, ANK rep...    80   8e-15
Alignment   gi|XP_003127544.2| PREDICTED: arf-GAP with coiled-coil, ANK rep...    79   1e-14

>ref|XP_003122862.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 2
            isoform 1 [Sus scrofa].
          Length = 520

 Score =  905 bits (2338), Expect = 0.0
 Identities = 465/520 (89%), Positives = 465/520 (89%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA
Sbjct: 121  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 180

Query: 570  ESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQSF 749
            ESSGLAQPEHGPNMDLLGTSPKASLELKTSLI                    QKVSSQSF
Sbjct: 181  ESSGLAQPEHGPNMDLLGTSPKASLELKTSLIGKKKPAAAKKGLGAKKGLGAQKVSSQSF 240

Query: 750  SEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 929
            SEIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE
Sbjct: 241  SEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 300

Query: 930  QAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN 1109
            QAERLGMG             EMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN
Sbjct: 301  QAERLGMGLVSRSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN 360

Query: 1110 PFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEA 1289
            PFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEA
Sbjct: 361  PFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEA 420

Query: 1290 RQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLG 1469
            RQKFAGAKAISSDMFFGREVDSEYEARSRLQQL         DLFGDMDGAHGAGSVSLG
Sbjct: 421  RQKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFGDMDGAHGAGSVSLG 480

Query: 1470 NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 481  NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 520


>ref|XP_003361175.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 2-like
            [Sus scrofa].
          Length = 545

 Score =  895 bits (2313), Expect = 0.0
 Identities = 460/519 (88%), Positives = 461/519 (88%)
 Frame = +3

Query: 33   AAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLS 212
            AAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLS
Sbjct: 27   AAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLS 86

Query: 213  FIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQL 392
            FIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQL
Sbjct: 87   FIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQL 146

Query: 393  GSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSAE 572
            GSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSAE
Sbjct: 147  GSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSAE 206

Query: 573  SSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQSFS 752
            SSGLAQPEHGPNMDLLGTSP +  ELKTSLI                    QKVSSQSFS
Sbjct: 207  SSGLAQPEHGPNMDLLGTSPLSHTELKTSLIGKKKPAAAKKGLGAKKGLGAQKVSSQSFS 266

Query: 753  EIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQ 932
            EIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQ
Sbjct: 267  EIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQ 326

Query: 933  AERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDNP 1112
            AERLGMG             EMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDNP
Sbjct: 327  AERLGMGLVSRSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDNP 386

Query: 1113 FSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEAR 1292
            FSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEAR
Sbjct: 387  FSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEAR 446

Query: 1293 QKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLGN 1472
            QKFAGAKAISSDMFFGREVDSEYEARSRLQQL         DLFGDMDGAHGAGSVSLGN
Sbjct: 447  QKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFGDMDGAHGAGSVSLGN 506

Query: 1473 VLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            VLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 507  VLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 545


>ref|XP_003353922.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 2
            isoform 2 [Sus scrofa].
          Length = 414

 Score =  666 bits (1718), Expect = 0.0
 Identities = 359/441 (81%), Positives = 359/441 (81%)
 Frame = +3

Query: 267  MQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHGTDLWIDNMS 446
            MQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHGTD       
Sbjct: 1    MQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHGTD------- 53

Query: 447  SAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSAESSGLAQPEHGPNMDLLGT 626
                                PPAWSAPATDLSETQQPAPSAESSGLAQPEHGPNMDLLGT
Sbjct: 54   --------------------PPAWSAPATDLSETQQPAPSAESSGLAQPEHGPNMDLLGT 93

Query: 627  SPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQSFSEIERQAQVAEKLRXXXXX 806
            SPKASLELKTSLI                    QKVSSQSFSEIERQAQVAEKLR     
Sbjct: 94   SPKASLELKTSLIGKKKPAAAKKGLGAKKGLGAQKVSSQSFSEIERQAQVAEKLREQQAA 153

Query: 807  XXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQAERLGMGXXXXXXXXXXX 986
                    SMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQAERLGMG           
Sbjct: 154  DAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQAERLGMGLVSRSSVSHSV 213

Query: 987  XXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDNPFSLGESFGSRWDADAAWG 1166
              EMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDNPFSLGESFGSRWDADAAWG
Sbjct: 214  LSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDNPFSLGESFGSRWDADAAWG 273

Query: 1167 MDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEARQKFAGAKAISSDMFFGRE 1346
            MDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEARQKFAGAKAISSDMFFGRE
Sbjct: 274  MDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEARQKFAGAKAISSDMFFGRE 333

Query: 1347 VDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLGNVLPTADIAQFKQGVKSVA 1526
            VDSEYEARSRLQQL         DLFGDMDGAHGAGSVSLGNVLPTADIAQFKQGVKSVA
Sbjct: 334  VDSEYEARSRLQQLSGSSAISSSDLFGDMDGAHGAGSVSLGNVLPTADIAQFKQGVKSVA 393

Query: 1527 GKMAVLANGVMNSLQDRYGSY 1589
            GKMAVLANGVMNSLQDRYGSY
Sbjct: 394  GKMAVLANGVMNSLQDRYGSY 414


>ref|XP_003126029.2| PREDICTED: ADP-ribosylation factor GTPase-activating protein 3-like
            isoform 2 [Sus scrofa].
          Length = 439

 Score =  287 bits (734), Expect = 2e-77
 Identities = 183/445 (41%), Positives = 258/445 (57%), Gaps = 14/445 (3%)
 Frame = +3

Query: 294  TAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHGTDLWIDNMSSAPSHSPEK 473
            ++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S A  +HGTDLW+D+    PS SP  
Sbjct: 10   SSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSCVVPPS-SPPP 68

Query: 474  KDSDFFSEHTQP----PAW-SAPATDLSETQQ--PAPSAESSGLAQPEHGPNMDLLGTSP 632
            K+ DFF+ H  P    P W SAP    S T +    P A S G A  E GP+++ L    
Sbjct: 69   KEEDFFASHASPEGSVPGWASAPPEPSSLTLRNVDTPPANSEGGA--EQGPSVEGLNVPT 126

Query: 633  KASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQSFSEIERQAQVAEKLR-XXXXXX 809
            KA+LE+ +S+I                    QK+++ SF+EIE+QAQ  +K++       
Sbjct: 127  KAALEV-SSIIKKKPNQARRGLGAKKGSLGAQKLANTSFNEIEKQAQAVDKMKEQEDLLA 185

Query: 810  XXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKREQAERLGMG-XXXXXXXXXXX 986
                   S+V+S+RLAY++L+I  KKEEK   N+ G+K+ ++ERLGMG            
Sbjct: 186  RTASKEESIVSSLRLAYKDLEIQMKKEEK--MNMSGQKKVESERLGMGFGNCRSGISHSV 243

Query: 987  XXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDNPFSLGESFGSRWD--ADAA 1160
              +MQ IEQETPV AK  +   D  DD  ++ +   +Y D P  L  S  S WD  +D+ 
Sbjct: 244  TSDMQTIEQETPVVAKPRKKYSDDNDD--SYFTSTSRYFDEPMELRSSSFSSWDDSSDSY 301

Query: 1161 WGMDRMEEKEP--EVTISSIRPISERVTNRREVESRSSGLESSEARQKFAGAKAISSDMF 1334
            W  + +++ +P  + T  + RP + R  +   V+      ++ EA++KF   KAISSDM+
Sbjct: 302  WKKETIKDTDPTLKTTGYTDRPAARRKPDHEPVD------DTDEAQKKFGNVKAISSDMY 355

Query: 1335 FGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLGNVLPTA-DIAQFKQG 1511
            FGR+  ++YE R+RL++          DLF +      AG+ +L +VLPTA D+AQFKQG
Sbjct: 356  FGRQAQADYETRARLERFSASSSISSADLF-EEQRKQTAGNYNLTSVLPTAPDMAQFKQG 414

Query: 1512 VKSVAGKMAVLANGVMNSLQDRYGS 1586
            V+SVAGK++V ANGVM S+QDRYGS
Sbjct: 415  VRSVAGKLSVFANGVMTSIQDRYGS 439


>ref|XP_003355371.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 3-like
           [Sus scrofa].
          Length = 93

 Score =  167 bits (422), Expect = 4e-41
 Identities = 74/85 (87%), Positives = 81/85 (95%)
 Frame = +3

Query: 39  EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
           +PSK +I T+FKRLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3   DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219 RSTELDSNWNWFQLRCMQVGGNANA 293
           RSTELDSNW+WFQLRCMQVGGNA+A
Sbjct: 63  RSTELDSNWSWFQLRCMQVGGNASA 87


>ref|XP_003355370.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 3-like
           [Sus scrofa].
          Length = 146

 Score = 93.2 bits (230), Expect = 7e-19
 Identities = 41/72 (56%), Positives = 51/72 (70%)
 Frame = +3

Query: 294 TAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHGTDLWIDNMSSAPSHSPEK 473
           ++FF QHGC  ND N KYNSRAAQ+YRE+I+ L S A  +HGTDLW+D+    PS SP  
Sbjct: 35  SSFFHQHGCATNDTNAKYNSRAAQLYRERIKSLASQATRKHGTDLWLDSCVVPPS-SPPP 93

Query: 474 KDSDFFSEHTQP 509
           K+ DFF+ H  P
Sbjct: 94  KEEDFFASHASP 105


>ref|NP_001121936.1| stromal membrane-associated protein 2 [Sus scrofa].
          Length = 429

 Score = 90.1 bits (222), Expect = 6e-18
 Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 18/220 (8%)
 Frame = +3

Query: 60  QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS 239
           Q +   L     NK C DC +K P WAS   GVF+CI C+G+HR+LGVH+S ++S  LD 
Sbjct: 13  QAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD- 71

Query: 240 NWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKI-------RQLGS 398
            W   Q++CMQ  GN  A   +  +         + +       R+K        R L  
Sbjct: 72  QWTQEQIQCMQEMGNGKANRLYEAY-LPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDI 130

Query: 399 AALARHGTDLWIDNMSSAPSHS-----------PEKKDSDFFSEHTQPPAWSAPATDLSE 545
            AL +   D W      AP              P+KK+       + P + +AP  DL  
Sbjct: 131 NALRKEKDDKWKRGSEPAPEKKMEPVVFEKVKMPQKKEDPQLPRKSSPKS-TAPVMDLLG 189

Query: 546 TQQPAPSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLI 665
              P   + ++         ++DLL + P  S  +   ++
Sbjct: 190 LDAPVSCSTANNKTSNTLEKDLDLLASVPSPSSSVSRKVV 229


>ref|XP_003121323.2| PREDICTED: stromal membrane-associated protein 1 [Sus scrofa].
          Length = 441

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 68/233 (29%), Positives = 96/233 (41%), Gaps = 23/233 (9%)
 Frame = +3

Query: 36  AEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSF 215
           A+    + Q +  +L     NK C DC AK P WAS   GVF+CI C+G+HR+LGVH+S 
Sbjct: 10  AQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISR 69

Query: 216 IRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYR------- 374
           ++S  LD  W   Q++CMQ  GN  A   +        +AN   N R  Q  +       
Sbjct: 70  VKSVNLD-QWTPEQIQCMQDMGNTKARLLY--------EANLPENFRRPQTDQAVEFFIR 120

Query: 375 ---EKIRQLGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEH-------------TQ 506
              EK +     A+A               S  PE++  +  SE              T 
Sbjct: 121 DKYEKKKYYDKNAIAISNVIKRKKKQQKQRSWRPEQQTRELASEQLSKEDQQLEPKKSTS 180

Query: 507 PPAWSAPATDLSETQQPAPSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLI 665
           P   + P  DL     PA +  ++G        N DL    P  S  L T+++
Sbjct: 181 PKKAAEPTVDLLGLDGPAEAPVTNGNTATVPALNDDLDIFGPMISNPLPTTVM 233


>ref|XP_003358807.1| PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH
           domain-containing protein 2 [Sus scrofa].
          Length = 555

 Score = 79.7 bits (195), Expect = 8e-15
 Identities = 58/195 (29%), Positives = 87/195 (44%)
 Frame = +3

Query: 60  QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS 239
           ++  +R++ IP N +C DCG  +P WASI  G+ LCI+CSG+HRSLGVH S +RS  LD+
Sbjct: 176 ESALQRVQCIPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDT 235

Query: 240 NWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHG 419
            W    L+ M   GN      +      AN              +EK   + +  + R  
Sbjct: 236 -WEPELLKLMCELGNDVINRVYE-----ANVEKMGVKKPQPGQRQEKEAYIRAKYVERKF 289

Query: 420 TDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSAESSGLAQPEH 599
            D +  ++SS+P    +K  S    E     +   P+  +    Q +  +  SG+ Q   
Sbjct: 290 VDKY--SISSSPPEQEKKIVSKSSEEKRLSISKLGPSEQVRAFPQSSVKSNDSGIQQSSD 347

Query: 600 GPNMDLLGTSPKASL 644
                L  T    SL
Sbjct: 348 DGRESLPSTVSTNSL 362


>ref|XP_003127544.2| PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH
           domain-containing protein 3 [Sus scrofa].
          Length = 865

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
 Frame = +3

Query: 60  QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS 239
           +++ +R++ +  N  C DCG  +P WASI  GV LCI+CSG+HRSLGVH S +RS  LDS
Sbjct: 435 ESVLQRVQGVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDS 494

Query: 240 NWNWFQLRCMQVGGNANATAFFR-------QHGCTANDANTKYNSRAAQMYREK--IRQL 392
            W    L+ M   GN+     +            TAN       +     Y EK  +R+L
Sbjct: 495 -WEPELLKLMCELGNSTMNQIYEAQCEGLGSRKPTANSPRQDKEAWIKDKYVEKKFVRKL 553

Query: 393 GSAALARHGTDLW 431
            SA  AR     W
Sbjct: 554 PSAP-AREAPRRW 565


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 76,276,227
Number of extensions: 2418225
Number of successful extensions: 11284
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 11070
Number of HSP's successfully gapped: 25
Length of query: 929
Length of database: 11,343,932
Length adjustment: 108
Effective length of query: 821
Effective length of database: 8,655,056
Effective search space: 7105800976
Effective search space used: 7105800976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008478
         (2788 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_076343.2| ADP-ribosylation factor GTPase-activating prote...   833   0.0  
Alignment   gi|NP_001159496.1| ADP-ribosylation factor GTPase-activating pr...   823   0.0  
Alignment   gi|NP_079721.2| ADP-ribosylation factor GTPase-activating prote...   434   e-121
Alignment   gi|XP_003086028.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   273   7e-73
Alignment   gi|NP_001171180.1| ADP-ribosylation factor GTPase-activating pr...   105   2e-22
Alignment   gi|NP_001171179.1| ADP-ribosylation factor GTPase-activating pr...   105   2e-22
Alignment   gi|NP_001171178.1| ADP-ribosylation factor GTPase-activating pr...   105   2e-22
Alignment   gi|NP_001171177.1| ADP-ribosylation factor GTPase-activating pr...   105   2e-22
Alignment   gi|NP_665703.2| ADP-ribosylation factor GTPase-activating prote...   105   2e-22
Alignment   gi|NP_598477.2| stromal membrane-associated protein 2 [Mus musc...    86   1e-16

>ref|NP_076343.2| ADP-ribosylation factor GTPase-activating protein 2 isoform 2 [Mus
            musculus].
          Length = 520

 Score =  833 bits (2151), Expect = 0.0
 Identities = 425/520 (81%), Positives = 446/520 (85%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAA PSKTEIQT+FKRLRAIPTNKACFDCGAK+PSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAASPSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNW+W QLRCMQVGGNANATAFFRQHGC ANDANTKY SRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWSWLQLRCMQVGGNANATAFFRQHGCMANDANTKYTSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAAL RHGTDLWID+M+SAPSHSPEKKDSDFF+EHTQ PAW   ATD S TQQPA  +
Sbjct: 121  LGSAALTRHGTDLWIDSMNSAPSHSPEKKDSDFFTEHTQAPAWDTAATDPSGTQQPALPS 180

Query: 570  ESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQSF 749
            ESS LAQPE GPN DLLGTSP+ASLELK+S+I                    QKVS+QSF
Sbjct: 181  ESSSLAQPEQGPNTDLLGTSPQASLELKSSIIGKKKPAAAKKGLGAKKGLGAQKVSNQSF 240

Query: 750  SEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 929
            +EIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE
Sbjct: 241  TEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 300

Query: 930  QAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN 1109
            QAERLGMG             EMQ+IEQETP+SAKSSRSQLDLFDDVGTFASGPPKYKDN
Sbjct: 301  QAERLGMGLVSRSSISHSVLSEMQMIEQETPLSAKSSRSQLDLFDDVGTFASGPPKYKDN 360

Query: 1110 PFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEA 1289
            PFSLGE+FGSRWD+DAAWGMDR+EEKEPEVTISSIRPISER  +RREVE+RSSGLESSEA
Sbjct: 361  PFSLGETFGSRWDSDAAWGMDRVEEKEPEVTISSIRPISERTASRREVETRSSGLESSEA 420

Query: 1290 RQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLG 1469
            RQKFAGAKAISSDMFFGREVDSEYEARSRLQQL         DLFG+MDGAHG G+VSLG
Sbjct: 421  RQKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFGNMDGAHGGGTVSLG 480

Query: 1470 NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 481  NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 520


>ref|NP_001159496.1| ADP-ribosylation factor GTPase-activating protein 2 isoform 1 [Mus
            musculus].
          Length = 534

 Score =  823 bits (2126), Expect = 0.0
 Identities = 425/534 (79%), Positives = 446/534 (83%), Gaps = 14/534 (2%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAA PSKTEIQT+FKRLRAIPTNKACFDCGAK+PSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAASPSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNW+W QLRCMQVGGNANATAFFRQHGC ANDANTKY SRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWSWLQLRCMQVGGNANATAFFRQHGCMANDANTKYTSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAAL RHGTDLWID+M+SAPSHSPEKKDSDFF+EHTQ PAW   ATD S TQQPA  +
Sbjct: 121  LGSAALTRHGTDLWIDSMNSAPSHSPEKKDSDFFTEHTQAPAWDTAATDPSGTQQPALPS 180

Query: 570  ESSGLAQPEHGPNMDLLGTSPKASLE--------------LKTSLIXXXXXXXXXXXXXX 707
            ESS LAQPE GPN DLLGTSP+ASLE              LK+S+I              
Sbjct: 181  ESSSLAQPEQGPNTDLLGTSPQASLESMYLSAKGPSCTRELKSSIIGKKKPAAAKKGLGA 240

Query: 708  XXXXXXQKVSSQSFSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKK 887
                  QKVS+QSF+EIERQAQVAEKLR             SMVASMRLAYQELQIDRKK
Sbjct: 241  KKGLGAQKVSNQSFTEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKK 300

Query: 888  EEKKLQNLEGKKREQAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDD 1067
            EEKKLQNLEGKKREQAERLGMG             EMQ+IEQETP+SAKSSRSQLDLFDD
Sbjct: 301  EEKKLQNLEGKKREQAERLGMGLVSRSSISHSVLSEMQMIEQETPLSAKSSRSQLDLFDD 360

Query: 1068 VGTFASGPPKYKDNPFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRR 1247
            VGTFASGPPKYKDNPFSLGE+FGSRWD+DAAWGMDR+EEKEPEVTISSIRPISER  +RR
Sbjct: 361  VGTFASGPPKYKDNPFSLGETFGSRWDSDAAWGMDRVEEKEPEVTISSIRPISERTASRR 420

Query: 1248 EVESRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFG 1427
            EVE+RSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQL         DLFG
Sbjct: 421  EVETRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLSGSSAISSSDLFG 480

Query: 1428 DMDGAHGAGSVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            +MDGAHG G+VSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 481  NMDGAHGGGTVSLGNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 534


>ref|NP_079721.2| ADP-ribosylation factor GTPase-activating protein 3 [Mus musculus].
          Length = 524

 Score =  434 bits (1115), Expect = e-121
 Identities = 254/534 (47%), Positives = 329/534 (61%), Gaps = 18/534 (3%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I  +FKRLR++PTNK CFDCGAKNPSWASI+YGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILAIFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGN+NA++FF QHGC   D N KYNSRAAQ+YREKI+ L +
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNSNASSFFHQHGCATKDTNAKYNSRAAQLYREKIKTLAT 122

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQ---PPAWSAPATDLSETQQP---- 557
             A  RHGTDLW+D+  +AP  SP  K+ DFF+ H       A  A A   S +  P    
Sbjct: 123  QATRRHGTDLWLDS-CAAPPVSPPPKEEDFFASHASLEVSGAMQASAQPESASSTPWGLE 181

Query: 558  -APSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKV 734
              P     G   P  GP+++ L T  KA+ E+ +S+I                    QK+
Sbjct: 182  TTPEKHEGG---PGQGPSVEGLNTPGKAAPEV-SSIIKKKPNQAKKGLGAKKGSLGAQKL 237

Query: 735  SSQSFSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLE 914
            ++ SF+EIE+QAQ  +K +             S+V+S+RLAY++L+I RKK+E+   NL 
Sbjct: 238  TNTSFTEIEKQAQAVDKRKEQEDLARGAPKEESIVSSLRLAYKDLEISRKKDER--LNLS 295

Query: 915  GKKREQAERLGMG-XXXXXXXXXXXXXEMQVIEQETPVSAKSSRS-QLDLFDDVGTFAS- 1085
            G+K+ +AERLGMG              +MQ IEQE+P  AK  R  Q D  D   + +S 
Sbjct: 296  GQKKVEAERLGMGFGSCRSGISHSVTSDMQTIEQESPTLAKPRRKYQEDPEDSYFSSSSK 355

Query: 1086 ----GPPKYKDNPFSLGESFGSRWD--ADAAWGMDRMEEKEPEVTISSIRPISERVTNRR 1247
                   +Y D+P  L  S  S WD  AD+ W  D   + EP +  +     S+R + RR
Sbjct: 356  WSEQSSSRYFDDPMELRSSSFSSWDDGADSYWKKDSSRDPEPAMRSTG---SSDRPSARR 412

Query: 1248 EVESRSSGLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFG 1427
            + E    G  + EA++KF   KAISSDM+FG +  +++E R+RL++L         DLF 
Sbjct: 413  KPEYEPIG-STDEAQKKFGNVKAISSDMYFGIQAQTDFETRARLERLSTSSSISSADLF- 470

Query: 1428 DMDGAHGAGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGS 1586
            D      AG+ +L NVLP A D+AQFKQGV+SVAGK++V ANGVM S+QDRYGS
Sbjct: 471  DEQRKQTAGNYNLSNVLPNAPDMAQFKQGVRSVAGKLSVFANGVMTSIQDRYGS 524


>ref|XP_003086028.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein 3-like
           [Mus musculus].
          Length = 389

 Score =  273 bits (697), Expect = 7e-73
 Identities = 146/300 (48%), Positives = 184/300 (61%), Gaps = 8/300 (2%)
 Frame = +3

Query: 39  EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
           +PSK +I  +FKRLR++PTNK CFDCGAKNPSWASI+YGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3   DPSKQDILAIFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219 RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
           RSTELDSNW+WFQLRCMQVGGN+NA++FF QHGC   D N KYNSRAAQ+YREKI+ L +
Sbjct: 63  RSTELDSNWSWFQLRCMQVGGNSNASSFFHQHGCATKDTNAKYNSRAAQLYREKIKTLAT 122

Query: 399 AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQ---PPAWSAPATDLSETQQP---- 557
            A  RHGTDLW+D+  +AP  SP  K+ DFF+ H       A  A A   S +  P    
Sbjct: 123 QATRRHGTDLWLDS-CAAPPVSPPPKEEDFFASHASLEVSGAMQASAQPESASSTPWGLE 181

Query: 558 -APSAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKV 734
             P     G   P  GP+++ L T  KA+    +S+I                    QK+
Sbjct: 182 TTPEKHEGG---PGQGPSVEGLNTPGKAAPAEVSSIIKKKPNQAKKGLGAKKGSLGAQKL 238

Query: 735 SSQSFSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLE 914
           ++ SF+EIE+QAQ  +K +             SM ++ R    E      + +KK  N++
Sbjct: 239 TNTSFTEIEKQAQAVDKRKEQEDLARGAPKEESMPSARRKPEYEPIGSTDEAQKKFGNVK 298



 Score =  107 bits (266), Expect = 7e-23
 Identities = 66/145 (45%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
 Frame = +3

Query: 1158 AWGMDRMEEKEPEVTISSIRPISERVTN-RREVESRSSGLESSEARQKFAGAKAISSDMF 1334
            A  +D+ +E+E    ++   P  E + + RR+ E    G  + EA++KF   KAISSDM+
Sbjct: 250  AQAVDKRKEQED---LARGAPKEESMPSARRKPEYEPIG-STDEAQKKFGNVKAISSDMY 305

Query: 1335 FGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLGNVLPTA-DIAQFKQG 1511
            FG +  +++E R+RL++L         DLF D      AG+ +L NVLP A D+AQFKQG
Sbjct: 306  FGIQAQTDFETRARLERLSTSSSISSADLF-DEQRKQTAGNYNLSNVLPNAPDMAQFKQG 364

Query: 1512 VKSVAGKMAVLANGVMNSLQDRYGS 1586
            V+SVAGK++V ANGVM S+QDRYGS
Sbjct: 365  VRSVAGKLSVFANGVMTSIQDRYGS 389


>ref|NP_001171180.1| ADP-ribosylation factor GTPase-activating protein 1 isoform b [Mus
           musculus].
          Length = 392

 Score =  105 bits (261), Expect = 2e-22
 Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
 Frame = +3

Query: 66  LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW 245
           + K +RA   N  CF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 246 NWFQLRCMQVGGNANATAFFRQHGCTAND------ANTKYNSRAAQMYREKIRQLGSAAL 407
              +L  M+ GGNA     FR+   T +D         KY+SRAA ++R+K+  L     
Sbjct: 68  KDIELEKMKAGGNAK----FREFLETQDDYEPSWSLQDKYSSRAAALFRDKVATLAEG-- 121

Query: 408 ARHGTDLWIDNMSSAPSHSPEKKDSDFFSEH 500
                  W    S A + +P +  +  F+ H
Sbjct: 122 -----KEWSLESSPAQNWTPPQPKTLQFTAH 147


>ref|NP_001171179.1| ADP-ribosylation factor GTPase-activating protein 1 isoform c [Mus
           musculus].
          Length = 394

 Score =  105 bits (261), Expect = 2e-22
 Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
 Frame = +3

Query: 66  LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW 245
           + K +RA   N  CF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 246 NWFQLRCMQVGGNANATAFFRQHGCTAND------ANTKYNSRAAQMYREKIRQLGSAAL 407
              +L  M+ GGNA     FR+   T +D         KY+SRAA ++R+K+  L     
Sbjct: 68  KDIELEKMKAGGNAK----FREFLETQDDYEPSWSLQDKYSSRAAALFRDKVATLAEG-- 121

Query: 408 ARHGTDLWIDNMSSAPSHSPEKKDSDFFSEH 500
                  W    S A + +P +  +  F+ H
Sbjct: 122 -----KEWSLESSPAQNWTPPQPKTLQFTAH 147


>ref|NP_001171178.1| ADP-ribosylation factor GTPase-activating protein 1 isoform c [Mus
           musculus].
          Length = 394

 Score =  105 bits (261), Expect = 2e-22
 Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
 Frame = +3

Query: 66  LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW 245
           + K +RA   N  CF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 246 NWFQLRCMQVGGNANATAFFRQHGCTAND------ANTKYNSRAAQMYREKIRQLGSAAL 407
              +L  M+ GGNA     FR+   T +D         KY+SRAA ++R+K+  L     
Sbjct: 68  KDIELEKMKAGGNAK----FREFLETQDDYEPSWSLQDKYSSRAAALFRDKVATLAEG-- 121

Query: 408 ARHGTDLWIDNMSSAPSHSPEKKDSDFFSEH 500
                  W    S A + +P +  +  F+ H
Sbjct: 122 -----KEWSLESSPAQNWTPPQPKTLQFTAH 147


>ref|NP_001171177.1| ADP-ribosylation factor GTPase-activating protein 1 isoform b [Mus
           musculus].
          Length = 392

 Score =  105 bits (261), Expect = 2e-22
 Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
 Frame = +3

Query: 66  LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW 245
           + K +RA   N  CF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 246 NWFQLRCMQVGGNANATAFFRQHGCTAND------ANTKYNSRAAQMYREKIRQLGSAAL 407
              +L  M+ GGNA     FR+   T +D         KY+SRAA ++R+K+  L     
Sbjct: 68  KDIELEKMKAGGNAK----FREFLETQDDYEPSWSLQDKYSSRAAALFRDKVATLAEG-- 121

Query: 408 ARHGTDLWIDNMSSAPSHSPEKKDSDFFSEH 500
                  W    S A + +P +  +  F+ H
Sbjct: 122 -----KEWSLESSPAQNWTPPQPKTLQFTAH 147


>ref|NP_665703.2| ADP-ribosylation factor GTPase-activating protein 1 isoform a [Mus
           musculus].
          Length = 414

 Score =  105 bits (261), Expect = 2e-22
 Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
 Frame = +3

Query: 66  LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW 245
           + K +RA   N  CF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 246 NWFQLRCMQVGGNANATAFFRQHGCTAND------ANTKYNSRAAQMYREKIRQLGSAAL 407
              +L  M+ GGNA     FR+   T +D         KY+SRAA ++R+K+  L     
Sbjct: 68  KDIELEKMKAGGNAK----FREFLETQDDYEPSWSLQDKYSSRAAALFRDKVATLAEG-- 121

Query: 408 ARHGTDLWIDNMSSAPSHSPEKKDSDFFSEH 500
                  W    S A + +P +  +  F+ H
Sbjct: 122 -----KEWSLESSPAQNWTPPQPKTLQFTAH 147


>ref|NP_598477.2| stromal membrane-associated protein 2 [Mus musculus].
          Length = 428

 Score = 86.3 bits (212), Expect = 1e-16
 Identities = 60/212 (28%), Positives = 88/212 (41%), Gaps = 18/212 (8%)
 Frame = +3

Query: 60  QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS 239
           Q +   L     NK C DC +K P WAS   GVF+CI C+G+HR+LGVH+S ++S  LD 
Sbjct: 13  QAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD- 71

Query: 240 NWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKI-------RQLGS 398
            W   Q++CMQ  GN  A   +  +         + +       R+K        R L  
Sbjct: 72  QWTQEQIQCMQEMGNGKANRLYEAY-LPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDI 130

Query: 399 AALARHGTDLWIDNMSSAPSHS-----------PEKKDSDFFSEHTQPPAWSAPATDLSE 545
             L +   D W      AP              P+KK+       + P + +AP  DL  
Sbjct: 131 NVLRKEKDDKWKRGNEPAPEKKMEPVVFEKVKMPQKKEDAQLPRKSSPKS-AAPVMDLLG 189

Query: 546 TQQPAPSAESSGLAQPEHGPNMDLLGTSPKAS 641
              P   + ++         ++DLL + P  S
Sbjct: 190 LDAPVACSIANSKTSNALEKDLDLLASVPSPS 221


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 101,489,283
Number of extensions: 3105497
Number of successful extensions: 13649
Number of sequences better than 1.0e-05: 36
Number of HSP's gapped: 13564
Number of HSP's successfully gapped: 37
Length of query: 929
Length of database: 15,617,559
Length adjustment: 111
Effective length of query: 818
Effective length of database: 12,283,563
Effective search space: 10047954534
Effective search space used: 10047954534
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008478
         (2788 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_115765.2| ADP-ribosylation factor GTPase-activating prote...   876   0.0  
Alignment   gi|NP_001229761.1| ADP-ribosylation factor GTPase-activating pr...   811   0.0  
Alignment   gi|NP_055385.3| ADP-ribosylation factor GTPase-activating prote...   445   e-125
Alignment   gi|NP_001135765.1| ADP-ribosylation factor GTPase-activating pr...   360   5e-99
Alignment   gi|NP_783202.1| ADP-ribosylation factor GTPase-activating prote...   103   1e-21
Alignment   gi|NP_060679.1| ADP-ribosylation factor GTPase-activating prote...   103   1e-21
Alignment   gi|NP_073570.1| stromal membrane-associated protein 2 isoform 1...    86   2e-16
Alignment   gi|NP_001037770.1| stromal membrane-associated protein 1 isofor...    83   1e-15
Alignment   gi|NP_068759.2| stromal membrane-associated protein 1 isoform B...    83   1e-15
Alignment   gi|NP_036419.3| arf-GAP with coiled-coil, ANK repeat and PH dom...    79   3e-14

>ref|NP_115765.2| ADP-ribosylation factor GTPase-activating protein 2 isoform 1 [Homo
            sapiens].
          Length = 521

 Score =  876 bits (2263), Expect = 0.0
 Identities = 449/521 (86%), Positives = 458/521 (87%), Gaps = 1/521 (0%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAAEP+KTEIQTLFKRLRA+PTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAAEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSA-PSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPS 566
            LGSAALARHGTDLWIDNMSSA P+HSPEKKDSDFF+EHTQPPAW APAT+ S TQQPAPS
Sbjct: 121  LGSAALARHGTDLWIDNMSSAVPNHSPEKKDSDFFTEHTQPPAWDAPATEPSGTQQPAPS 180

Query: 567  AESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQS 746
             ESSGLAQPEHGPN DLLGTSPKASLELK+S+I                    QKVSSQS
Sbjct: 181  TESSGLAQPEHGPNTDLLGTSPKASLELKSSIIGKKKPAAAKKGLGAKKGLGAQKVSSQS 240

Query: 747  FSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKR 926
            FSEIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEEKKLQNLEGKKR
Sbjct: 241  FSEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKR 300

Query: 927  EQAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKD 1106
            EQAERLGMG             EMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKD
Sbjct: 301  EQAERLGMGLVSRSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKD 360

Query: 1107 NPFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSE 1286
            NPFSLGESFGSRWD DAAWGMDR+EEKEPEVTISSIRPISER TNRREVESRSSGLESSE
Sbjct: 361  NPFSLGESFGSRWDTDAAWGMDRVEEKEPEVTISSIRPISERATNRREVESRSSGLESSE 420

Query: 1287 ARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSL 1466
            ARQKFAGAKAISSDMFFGREVD+EYEARSRLQQL         DLFGDMDGAHGAGSVSL
Sbjct: 421  ARQKFAGAKAISSDMFFGREVDAEYEARSRLQQLSGSSAISSSDLFGDMDGAHGAGSVSL 480

Query: 1467 GNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            GNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 481  GNVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 521


>ref|NP_001229761.1| ADP-ribosylation factor GTPase-activating protein 2 isoform 2 [Homo
            sapiens].
          Length = 493

 Score =  811 bits (2095), Expect = 0.0
 Identities = 424/520 (81%), Positives = 431/520 (82%)
 Frame = +3

Query: 30   MAAEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 209
            MAAEP+KTEIQTLFKRLRA+PTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL
Sbjct: 1    MAAEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHL 60

Query: 210  SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 389
            SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ
Sbjct: 61   SFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQ 120

Query: 390  LGSAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATDLSETQQPAPSA 569
            LGSAALARHGTD                           PPAW APAT+ S TQQPAPS 
Sbjct: 121  LGSAALARHGTD---------------------------PPAWDAPATEPSGTQQPAPST 153

Query: 570  ESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQSF 749
            ESSGLAQPEHGPN DLLGTSPKASLELK+S+I                    QKVSSQSF
Sbjct: 154  ESSGLAQPEHGPNTDLLGTSPKASLELKSSIIGKKKPAAAKKGLGAKKGLGAQKVSSQSF 213

Query: 750  SEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 929
            SEIERQAQVAEKLR             SMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE
Sbjct: 214  SEIERQAQVAEKLREQQAADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQNLEGKKRE 273

Query: 930  QAERLGMGXXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN 1109
            QAERLGMG             EMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN
Sbjct: 274  QAERLGMGLVSRSSVSHSVLSEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKYKDN 333

Query: 1110 PFSLGESFGSRWDADAAWGMDRMEEKEPEVTISSIRPISERVTNRREVESRSSGLESSEA 1289
            PFSLGESFGSRWD DAAWGMDR+EEKEPEVTISSIRPISER TNRREVESRSSGLESSEA
Sbjct: 334  PFSLGESFGSRWDTDAAWGMDRVEEKEPEVTISSIRPISERATNRREVESRSSGLESSEA 393

Query: 1290 RQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHGAGSVSLG 1469
            RQKFAGAKAISSDMFFGREVD+EYEARSRLQQL         DLFGDMDGAHGAGSVSLG
Sbjct: 394  RQKFAGAKAISSDMFFGREVDAEYEARSRLQQLSGSSAISSSDLFGDMDGAHGAGSVSLG 453

Query: 1470 NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 1589
            NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY
Sbjct: 454  NVLPTADIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGSY 493


>ref|NP_055385.3| ADP-ribosylation factor GTPase-activating protein 3 isoform 1 [Homo
            sapiens].
          Length = 516

 Score =  445 bits (1145), Expect = e-125
 Identities = 252/527 (47%), Positives = 332/527 (62%), Gaps = 11/527 (2%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I T+FKRLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGNA+A++FF QHGC+ ND N KYNSRAAQ+YREKI+ L S
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCSTNDTNAKYNSRAAQLYREKIKSLAS 122

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQP----PAW-SAPATDLSETQQPAP 563
             A  +HGTDLW+D+    P  SP  K+ DFF+ H  P     AW SA A   S T +P  
Sbjct: 123  QATRKHGTDLWLDS-CVVPPLSPPPKEEDFFASHVSPEVSDTAWASAIAEPSSLTSRPVE 181

Query: 564  SAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQ 743
            +   +     E GP+++ L    KA+LE+ +S+I                    QK+++ 
Sbjct: 182  TTLENNEGGQEQGPSVEGLNVPTKATLEV-SSIIKKKPNQAKKGLGAKKGSLGAQKLANT 240

Query: 744  SFSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKK 923
             F+EIE+QAQ A+K++             S+V+S+RLAY++L+I  KK+EK   N+ GKK
Sbjct: 241  CFNEIEKQAQAADKMKEQEDLAKVVSKEESIVSSLRLAYKDLEIQMKKDEK--MNISGKK 298

Query: 924  REQAERLGMG-XXXXXXXXXXXXXEMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKY 1100
               ++RLGMG              +MQ IEQE+P+ AK  +   D  DD  ++ +    Y
Sbjct: 299  NVDSDRLGMGFGNCRSVISHSVTSDMQTIEQESPIMAKPRKKYNDDSDD--SYFTSSSSY 356

Query: 1101 KDNPFSLGESFGSRWD--ADAAWGMDRMEEKEP--EVTISSIRPISERVTNRREVESRSS 1268
             D P  L  S  S WD  +D+ W  +  ++ E   + T  S RP + R  +   VE+   
Sbjct: 357  FDEPVELRSSSFSSWDDSSDSYWKKETSKDTETVLKTTGYSDRPTARRKPDYEPVEN--- 413

Query: 1269 GLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHG 1448
               + EA++KF   KAISSDM+FGR+  ++YE R+RL++L         DLF +      
Sbjct: 414  ---TDEAQKKFGNVKAISSDMYFGRQSQADYETRARLERLSASSSISSADLF-EEPRKQP 469

Query: 1449 AGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGS 1586
            AG+ SL +VLP A D+AQFKQGV+SVAGK++V ANGV+ S+QDRYGS
Sbjct: 470  AGNYSLSSVLPNAPDMAQFKQGVRSVAGKLSVFANGVVTSIQDRYGS 516


>ref|NP_001135765.1| ADP-ribosylation factor GTPase-activating protein 3 isoform 2 [Homo
            sapiens].
          Length = 472

 Score =  360 bits (923), Expect = 5e-99
 Identities = 223/527 (42%), Positives = 297/527 (56%), Gaps = 11/527 (2%)
 Frame = +3

Query: 39   EPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFI 218
            +PSK +I T+FKRLR++PTNK CFDCGAKNPSWASITYGVFLCIDCSG HRSLGVHLSFI
Sbjct: 3    DPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFI 62

Query: 219  RSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGS 398
            RSTELDSNW+WFQLRCMQVGGNA+A                                   
Sbjct: 63   RSTELDSNWSWFQLRCMQVGGNASA----------------------------------- 87

Query: 399  AALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPP----AW-SAPATDLSETQQPAP 563
                     LW+D+    P  SP  K+ DFF+ H  P     AW SA A   S T +P  
Sbjct: 88   ---------LWLDSCV-VPPLSPPPKEEDFFASHVSPEVSDTAWASAIAEPSSLTSRPVE 137

Query: 564  SAESSGLAQPEHGPNMDLLGTSPKASLELKTSLIXXXXXXXXXXXXXXXXXXXXQKVSSQ 743
            +   +     E GP+++ L    KA+LE+ +S+I                    QK+++ 
Sbjct: 138  TTLENNEGGQEQGPSVEGLNVPTKATLEV-SSIIKKKPNQAKKGLGAKKGSLGAQKLANT 196

Query: 744  SFSEIERQAQVAEKLRXXXXXXXXXXXXXSMVASMRLAYQELQIDRKKEEKKLQNLEGKK 923
             F+EIE+QAQ A+K++             S+V+S+RLAY++L+I  KK+EK   N+ GKK
Sbjct: 197  CFNEIEKQAQAADKMKEQEDLAKVVSKEESIVSSLRLAYKDLEIQMKKDEK--MNISGKK 254

Query: 924  REQAERLGMGXXXXXXXXXXXXX-EMQVIEQETPVSAKSSRSQLDLFDDVGTFASGPPKY 1100
               ++RLGMG              +MQ IEQE+P+ AK  +   D  DD  ++ +    Y
Sbjct: 255  NVDSDRLGMGFGNCRSVISHSVTSDMQTIEQESPIMAKPRKKYNDDSDD--SYFTSSSSY 312

Query: 1101 KDNPFSLGESFGSRWD--ADAAWGMDRMEEKEP--EVTISSIRPISERVTNRREVESRSS 1268
             D P  L  S  S WD  +D+ W  +  ++ E   + T  S RP + R  +   VE+   
Sbjct: 313  FDEPVELRSSSFSSWDDSSDSYWKKETSKDTETVLKTTGYSDRPTARRKPDYEPVEN--- 369

Query: 1269 GLESSEARQKFAGAKAISSDMFFGREVDSEYEARSRLQQLXXXXXXXXXDLFGDMDGAHG 1448
               + EA++KF   KAISSDM+FGR+  ++YE R+RL++L         DLF +      
Sbjct: 370  ---TDEAQKKFGNVKAISSDMYFGRQSQADYETRARLERLSASSSISSADLFEE-PRKQP 425

Query: 1449 AGSVSLGNVLPTA-DIAQFKQGVKSVAGKMAVLANGVMNSLQDRYGS 1586
            AG+ SL +VLP A D+AQFKQGV+SVAGK++V ANGV+ S+QDRYGS
Sbjct: 426  AGNYSLSSVLPNAPDMAQFKQGVRSVAGKLSVFANGVVTSIQDRYGS 472


>ref|NP_783202.1| ADP-ribosylation factor GTPase-activating protein 1 isoform b [Homo
           sapiens].
          Length = 414

 Score =  103 bits (256), Expect = 1e-21
 Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
 Frame = +3

Query: 66  LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW 245
           + K +R    N  CF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 246 NWFQLRCMQVGGNANATAFF--RQHGCTANDANTKYNSRAAQMYREKI 383
              +L  M+ GGNA    F   ++          KYNSRAA ++R+K+
Sbjct: 68  KDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKV 115


>ref|NP_060679.1| ADP-ribosylation factor GTPase-activating protein 1 isoform a [Homo
           sapiens].
          Length = 406

 Score =  103 bits (256), Expect = 1e-21
 Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
 Frame = +3

Query: 66  LFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW 245
           + K +R    N  CF+CGA NP W S+TYG+++C++CSG HR LGVHLSF+RS  +D  W
Sbjct: 9   VLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD-KW 67

Query: 246 NWFQLRCMQVGGNANATAFF--RQHGCTANDANTKYNSRAAQMYREKI 383
              +L  M+ GGNA    F   ++          KYNSRAA ++R+K+
Sbjct: 68  KDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKV 115


>ref|NP_073570.1| stromal membrane-associated protein 2 isoform 1 [Homo sapiens].
          Length = 429

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 18/212 (8%)
 Frame = +3

Query: 60  QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS 239
           Q +   L     NK C DC +K P WAS   GVF+CI C+G+HR+LGVH+S ++S  LD 
Sbjct: 13  QAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD- 71

Query: 240 NWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKI-------RQLGS 398
            W   Q++CMQ  GN  A   +  +         + +       R+K        R L  
Sbjct: 72  QWTQEQIQCMQEMGNGKANRLYEAY-LPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDI 130

Query: 399 AALARHGTDLWIDNMSSAPSHS-----------PEKKDSDFFSEHTQPPAWSAPATDLSE 545
            A  +   D W       P              P+KK+       + P + +AP  DL  
Sbjct: 131 NAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKS-TAPVMDLLG 189

Query: 546 TQQPAPSAESSGLAQPEHGPNMDLLGTSPKAS 641
              P   + ++         ++DLL + P  S
Sbjct: 190 LDAPVACSIANSKTSNTLEKDLDLLASVPSPS 221


>ref|NP_001037770.1| stromal membrane-associated protein 1 isoform A [Homo sapiens].
          Length = 467

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 68/222 (30%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
 Frame = +3

Query: 36  AEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSF 215
           A+    + Q +  +L     NK C DC AK P WAS   GVF+CI C+G+HR+LGVH+S 
Sbjct: 10  AQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISR 69

Query: 216 IRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYR------- 374
           ++S  LD  W   Q++CMQ  GN  A   +        +AN   N R  Q  +       
Sbjct: 70  VKSVNLD-QWTAEQIQCMQDMGNTKARLLY--------EANLPENFRRPQTDQAVEFFIR 120

Query: 375 ---EKIRQLGSAALA---RHGTDLWIDNMSSAPS------------HSPEKKDSDFFSEH 500
              EK +     A+A      +D  +  + S+PS               +KK+     + 
Sbjct: 121 DKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKE 180

Query: 501 TQPPAWSAPATDL-SETQQPAPSAESSGLAQPEHGPNMDLLG 623
            + PA    A  L  + QQ  P   +S     E  P +DLLG
Sbjct: 181 PEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAE--PTVDLLG 220


>ref|NP_068759.2| stromal membrane-associated protein 1 isoform B [Homo sapiens].
          Length = 440

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
 Frame = +3

Query: 36  AEPSKTEIQTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSF 215
           A+    + Q +  +L     NK C DC AK P WAS   GVF+CI C+G+HR+LGVH+S 
Sbjct: 10  AQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISR 69

Query: 216 IRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLG 395
           ++S  LD  W   Q++CMQ  GN  A   +        +AN   N R  Q      + + 
Sbjct: 70  VKSVNLD-QWTAEQIQCMQDMGNTKARLLY--------EANLPENFRRPQ----TDQAVE 116

Query: 396 SAALARHGTDLWIDNMSSAPSHSPEKKDSDFFSEHTQPPAWSAPATD---LSETQQPAPS 566
                ++    + D  + A ++  ++K  +      +P   + P T      + QQ  P 
Sbjct: 117 FFIRDKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPK 176

Query: 567 AESSGLAQPEHGPNMDLLG 623
             +S     E  P +DLLG
Sbjct: 177 KSTSPKKAAE--PTVDLLG 193


>ref|NP_036419.3| arf-GAP with coiled-coil, ANK repeat and PH domain-containing
           protein 2 [Homo sapiens].
          Length = 778

 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = +3

Query: 60  QTLFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS 239
           ++  +R++ IP N +C DCG  +P WASI  G+ LCI+CSG+HRSLGVH S +RS  LD+
Sbjct: 399 ESALQRVQCIPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDT 458

Query: 240 NWNWFQLRCMQVGGN 284
            W    L+ M   GN
Sbjct: 459 -WEPELLKLMCELGN 472


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 120,408,264
Number of extensions: 3753599
Number of successful extensions: 16843
Number of sequences better than 1.0e-05: 47
Number of HSP's gapped: 16732
Number of HSP's successfully gapped: 48
Length of query: 929
Length of database: 18,297,164
Length adjustment: 112
Effective length of query: 817
Effective length of database: 14,605,196
Effective search space: 11932445132
Effective search space used: 11932445132
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008478
         (2788 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr02                                                        2377   0.0  
gb|GL893675.2| Sus scrofa unplaced genomic scaffold ChrUScaf1560     1727   0.0  

>Sscrofa_Chr02 
||          Length = 162569375

 Score = 2377 bits (1199), Expect = 0.0
 Identities = 1214/1219 (99%)
 Strand = Plus / Plus

                                                                            
Query: 1570     aggatcgctatggttcctactgatccagggtcatggctcagacgtatggtgttgacagca 1629
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623564 aggatcgctatggttcctactgatccagggtcatggctcagacgtatggtgttgacagca 16623623

                                                                            
Query: 1630     gcaaaaacctcatgattcccaggcctgggatgcttgcctcgtggaagctggggaggaatg 1689
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623624 gcaaaaacctcatgattcccaggcctgggatgcttgcctcgtggaagctggggaggaatg 16623683

                                                                            
Query: 1690     gttcttttttacatgtggtgtgtgagtggggtggcctttgaggatctcgggtgagggatg 1749
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623684 gttcttttttacatgtggtgtgtgagtggggtggcctttgaggatctcgggtgagggatg 16623743

                                                                            
Query: 1750     ggcgggtaccagcccctgacctctgcctggagactgagcccttattctcctccctcacac 1809
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623744 ggcgggtaccagcccctgacctctgcctggagactgagcccttattctcctccctcacac 16623803

                                                                            
Query: 1810     ctccacccctgtgtgctaggttctcgttcttccactcctgccccaaagctgctgctcacc 1869
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623804 ctccacccctgtgtgctaggttctcgttcttccactcctgccccaaagctgctgctcacc 16623863

                                                                            
Query: 1870     tgtcctgccgcgctgggagtgaggggagggagtcccctcaggatggctgattctgggtct 1929
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623864 tgtcctgccgcgctgggagtgaggggagggagtcccctcaggatggctgattctgggtct 16623923

                                                                            
Query: 1930     agctcttccccaaattggggcagtaaaaagagtaaggctttttgctggctctaggatcct 1989
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623924 agctcttccccaaattggggcagtaaaaagagtaaggctttttgctggctctaggatcct 16623983

                                                                            
Query: 1990     tccaggccgtctgggggtttggcccccgtcctctgaaaccagcagggaggtctagaaagt 2049
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623984 tccaggccgtctgggggtttggcccccgtcctctgaaaccagcagggaggtctagaaagt 16624043

                                                                            
Query: 2050     tctgctgcacaccggcccctgggggaggcaggccctggacttgctgctgccgttgctgct 2109
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624044 tctgctgcacaccggcccctgggggaggcaggccctggacttgctgctgccgttgctgct 16624103

                                                                            
Query: 2110     ccgggagaggacaggggaggggaaggaccttcgtctgggcctcactaagggctagaacct 2169
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624104 ccgggagaggacaggggaggggaaggaccttcgtctgggcctcactaagggctagaacct 16624163

                                                                            
Query: 2170     tcacctggtacctaacgggatcagactggaggcccaagtggtctcttgctgtcccacggc 2229
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624164 tcacctggtacctaacgggatcagactggaggcccaagtggtctcttgctgtcccacggc 16624223

                                                                            
Query: 2230     ccctttttacagtgatcacctggaggggtctctctccttctgggtgtctctgagtccccc 2289
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 16624224 ccctttttacagtgatcacctggaggggtctctctccttctgggtgtctctgagtcctcc 16624283

                                                                            
Query: 2290     tataccatccatcgtagaccacagaaccctctgtcccctcctgagcctctgtcccttctc 2349
                ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624284 tatactatccatcgtggaccacagaaccctctgtcccctcctgagcctctgtcccttctc 16624343

                                                                            
Query: 2350     cccctgcttggtggccatgaaaggtctcatgtgccccatactctgctctggatgctgtga 2409
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624344 cccctgcttggtggccatgaaaggtctcatgtgccccatactctgctctggatgctgtga 16624403

                                                                            
Query: 2410     gcataatgctggctcaggaagagaggatgtgagggacagaaacaggctcccggggctcac 2469
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624404 gcataatgctggctcaggaagagaggatgtgagggacagaaacaggctcccggggctcac 16624463

                                                                            
Query: 2470     ctttcttcctcggcatcatcttggttttagggggccctggacagcacccaacccgagagc 2529
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624464 ctttcttcctcggcatcatcttggttttagggggccctggacagcacccaacccgagagc 16624523

                                                                            
Query: 2530     ctggggcgcctacagagctgcaggtcttaccccccaggccacgcactgtgccatccttgg 2589
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624524 ctggggcgcctacagagctgcaggtcttaccccccaggccacgcactgtgccatccttgg 16624583

                                                                            
Query: 2590     tgccatcttccctgccgtgccggcagcctggacccgccccacccctgttgggctgaggat 2649
                ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 16624584 tgccatcttccctgccgtgccggcagcctggacccaccccacccctggtgggctgaggat 16624643

                                                                            
Query: 2650     tgggctcccaagcagcacagaccactgtccccaccaccctctcccctgaagggatgtgac 2709
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624644 tgggctcccaagcagcacagaccactgtccccaccaccctctcccctgaagggatgtgac 16624703

                                                                            
Query: 2710     tttctttctggactgtttgtattgaaacaaagtagtgtcaaataaagccctgatggggcc 2769
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16624704 tttctttctggactgtttgtattgaaacaaagtagtgtcaaataaagccctgatggggcc 16624763

                                   
Query: 2770     ctgggcctctgttggtctg 2788
                |||||||||||||||||||
Sbjct: 16624764 ctgggcctctgttggtctg 16624782



 Score =  276 bits (139), Expect = 6e-71
 Identities = 139/139 (100%)
 Strand = Plus / Plus

                                                                            
Query: 698      gctgggtgccaagaaaggcctaggggcccagaaggtgagcagccagagtttcagtgagat 757
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16618567 gctgggtgccaagaaaggcctaggggcccagaaggtgagcagccagagtttcagtgagat 16618626

                                                                            
Query: 758      tgagcggcaggcacaggtagccgagaagctccgtgagcagcaggcagctgatgccaagaa 817
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16618627 tgagcggcaggcacaggtagccgagaagctccgtgagcagcaggcagctgatgccaagaa 16618686

                                   
Query: 818      gcaggctgaggagtccatg 836
                |||||||||||||||||||
Sbjct: 16618687 gcaggctgaggagtccatg 16618705



 Score =  270 bits (136), Expect = 4e-69
 Identities = 136/136 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1097     gtacaaggacaaccccttttccctgggggagagttttggttcccgctgggatgcagatgc 1156
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16621250 gtacaaggacaaccccttttccctgggggagagttttggttcccgctgggatgcagatgc 16621309

                                                                            
Query: 1157     tgcctggggtatggacaggatggaggagaaggagccagaagtgaccatctcaagcatccg 1216
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16621310 tgcctggggtatggacaggatggaggagaaggagccagaagtgaccatctcaagcatccg 16621369

                                
Query: 1217     gcccatttcagaaagg 1232
                ||||||||||||||||
Sbjct: 16621370 gcccatttcagaaagg 16621385



 Score =  266 bits (134), Expect = 6e-68
 Identities = 134/134 (100%)
 Strand = Plus / Plus

                                                                            
Query: 966      agctctgtttcccactcggtgctgtctgagatgcaggtgatcgagcaggaaaccccagtg 1025
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16621040 agctctgtttcccactcggtgctgtctgagatgcaggtgatcgagcaggaaaccccagtg 16621099

                                                                            
Query: 1026     agtgcaaaatcctcccgctcgcagctggacttgttcgacgatgttggtactttcgcctct 1085
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16621100 agtgcaaaatcctcccgctcgcagctggacttgttcgacgatgttggtactttcgcctct 16621159

                              
Query: 1086     ggacccccaaagta 1099
                ||||||||||||||
Sbjct: 16621160 ggacccccaaagta 16621173



 Score =  264 bits (133), Expect = 2e-67
 Identities = 133/133 (100%)
 Strand = Plus / Plus

                                                                            
Query: 293      gacagctttcttccgccaacatggatgcacagccaatgatgccaacaccaaatataatag 352
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16615673 gacagctttcttccgccaacatggatgcacagccaatgatgccaacaccaaatataatag 16615732

                                                                            
Query: 353      cagagctgcccagatgtaccgggaaaagatccggcagctggggagtgcggccctggctag 412
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16615733 cagagctgcccagatgtaccgggaaaagatccggcagctggggagtgcggccctggctag 16615792

                             
Query: 413      gcatggcactgat 425
                |||||||||||||
Sbjct: 16615793 gcatggcactgat 16615805



 Score =  262 bits (132), Expect = 9e-67
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                            
Query: 836      ggttgcctccatgcgtctggcctaccaggagctccagattgaccgtaagaaggaggagaa 895
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16618807 ggttgcctccatgcgtctggcctaccaggagctccagattgaccgtaagaaggaggagaa 16618866

                                                                            
Query: 896      gaagctacagaatctggaagggaagaagcgagagcaggcagagaggctgggcatgggctt 955
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16618867 gaagctacagaatctggaagggaagaagcgagagcaggcagagaggctgggcatgggctt 16618926

                            
Query: 956      ggtgtcccgaag 967
                ||||||||||||
Sbjct: 16618927 ggtgtcccgaag 16618938



 Score =  256 bits (129), Expect = 6e-65
 Identities = 129/129 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1230     agggtcacaaaccggagggaagtggaaagccggagctcaggccttgagtcgagtgaggca 1289
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16622501 agggtcacaaaccggagggaagtggaaagccggagctcaggccttgagtcgagtgaggca 16622560

                                                                            
Query: 1290     cggcagaaatttgcaggagccaaagccatctcatctgacatgttctttgggcgggaggta 1349
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16622561 cggcagaaatttgcaggagccaaagccatctcatctgacatgttctttgggcgggaggta 16622620

                         
Query: 1350     gattctgag 1358
                |||||||||
Sbjct: 16622621 gattctgag 16622629



 Score =  244 bits (123), Expect = 2e-61
 Identities = 123/123 (100%)
 Strand = Plus / Plus

                                                                            
Query: 100      aggcctgttttgactgtggcgccaagaatccgagttgggctagcatcacgtatggtgttt 159
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16614422 aggcctgttttgactgtggcgccaagaatccgagttgggctagcatcacgtatggtgttt 16614481

                                                                            
Query: 160      tcttgtgcattgattgctccggggtgcatcgctccctgggcgtccatctcagcttcatca 219
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16614482 tcttgtgcattgattgctccggggtgcatcgctccctgggcgtccatctcagcttcatca 16614541

                   
Query: 220      ggt 222
                |||
Sbjct: 16614542 ggt 16614544



 Score =  244 bits (123), Expect = 2e-61
 Identities = 123/123 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1450     caggtagcgtatctctggggaatgtgctgcccacggctgacattgcccagtttaagcagg 1509
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16622982 caggtagcgtatctctggggaatgtgctgcccacggctgacattgcccagtttaagcagg 16623041

                                                                            
Query: 1510     gtgtcaagtctgtggccgggaagatggctgtgctggccaatggtgtgatgaattctttgc 1569
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16623042 gtgtcaagtctgtggccgggaagatggctgtgctggccaatggtgtgatgaattctttgc 16623101

                   
Query: 1570     agg 1572
                |||
Sbjct: 16623102 agg 16623104



 Score =  198 bits (100), Expect = 1e-47
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1357     agtatgaagccagatctcggctacagcagctctcaggcagcagtgccatcagctcttcag 1416
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16622785 agtatgaagccagatctcggctacagcagctctcaggcagcagtgccatcagctcttcag 16622844

                                                        
Query: 1417     acctctttggggacatggatggagctcatggagcaggtag 1456
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 16622845 acctctttggggacatggatggagctcatggagcaggtag 16622884



 Score =  196 bits (99), Expect = 5e-47
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                            
Query: 4        gcgctggaatctgggaaggagagaaaatggcggccgagccgagcaagacagagatccaaa 63
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16614157 gcgctggaatctgggaaggagagaaaatggcggccgagccgagcaagacagagatccaaa 16614216

                                                       
Query: 64       ctctttttaagaggcttcgcgcaattccaaccaacaagg 102
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 16614217 ctctttttaagaggcttcgcgcaattccaaccaacaagg 16614255



 Score =  163 bits (82), Expect = 6e-37
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                            
Query: 507      ccccctgcctggagtgcaccagctactgatctgtctgagacccagcagccagccccatct 566
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16616684 ccccctgcctggagtgcaccagctactgatctgtctgagacccagcagccagccccatct 16616743

                                      
Query: 567      gcagagagcagtggcctggcac 588
                ||||||||||||||||||||||
Sbjct: 16616744 gcagagagcagtggcctggcac 16616765



 Score =  161 bits (81), Expect = 3e-36
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                            
Query: 426      ctttggatagacaatatgagtagtgctcccagccactccccagagaagaaggactctgat 485
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16615893 ctttggatagacaatatgagtagtgctcccagccactccccagagaagaaggactctgat 16615952

                                     
Query: 486      ttcttctccgaacacactcaa 506
                |||||||||||||||||||||
Sbjct: 16615953 ttcttctccgaacacactcaa 16615973



 Score =  151 bits (76), Expect = 2e-33
 Identities = 76/76 (100%)
 Strand = Plus / Plus

                                                                            
Query: 218      caggtccacagagttggattccaactggaactggttccagctgaggtgtatgcaggtcgg 277
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16615085 caggtccacagagttggattccaactggaactggttccagctgaggtgtatgcaggtcgg 16615144

                                
Query: 278      cgggaatgccaatgcg 293
                ||||||||||||||||
Sbjct: 16615145 cgggaatgccaatgcg 16615160



 Score =  113 bits (57), Expect = 5e-22
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                         
Query: 589      aaccagagcacggccccaacatggacctgcttggcacctcacccaaagcctctctgg 645
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16617043 aaccagagcacggccccaacatggacctgcttggcacctcacccaaagcctctctgg 16617099



 Score =  107 bits (54), Expect = 3e-20
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                      
Query: 645      gaactgaaaacctccctcattggcaagaagaagccagcggcagctaagaaaggg 698
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16618138 gaactgaaaacctccctcattggcaagaagaagccagcggcagctaagaaaggg 16618191


>gb|GL893675.2| Sus scrofa unplaced genomic scaffold ChrUScaf1560
          Length = 118150

 Score = 1727 bits (871), Expect = 0.0
 Identities = 902/912 (98%), Gaps = 4/912 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1881  gctgggagtgaggggagggagtcccctcaggatggctgattctgggtctagctcttcccc 1940
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51645 gctgggagtgaggggagggagtcccctcaggatggctgattctgggtctagctcttcccc 51586

                                                                         
Query: 1941  aaattggggcagtaaaaagagtaaggctttttgctggctctaggatccttccaggccgtc 2000
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51585 aaattggggcagtaaaaagagtaaggctttttgctggctctaggatccttccaggccgtc 51526

                                                                         
Query: 2001  tgggggtttggcccccgtcctctgaaaccagcagggaggtctagaaagttctgctgcaca 2060
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51525 tgggggtttggcccccgtcctctgaaaccagcagggaggtctagaaagttctgctgcaca 51466

                                                                         
Query: 2061  ccggcccctgggggaggcaggccctggacttgctgctgccgttgctgctccgggagagga 2120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51465 ccggcccctgggggaggcaggccctggacttgctgctgccgttgctgctccgggagagga 51406

                                                                         
Query: 2121  caggggaggggaaggaccttcgtctgggcctcactaagggctagaaccttcacctggtac 2180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51405 caggggaggggaaggaccttcgtctgggcctcactaagggctagaaccttcacctggtac 51346

                                                                         
Query: 2181  ctaacgggatcagactggaggcccaagtggtctcttgctgtcccacggcccctttttaca 2240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51345 ctaacgggatcagactggaggcccaagtggtctcttgctgtcccacggcccctttttaca 51286

                                                                         
Query: 2241  gtgatcacctggaggggtctctctccttctgggtgtctctgagtccccctataccatcca 2300
             |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 51285 gtgatcacctggaggggtctctctccttctgggtgtctctgagtcctcctatactatcca 51226

                                                                         
Query: 2301  tcgtagaccacagaaccctctgtcccctcctgagcctctgtcccttctccccctgcttgg 2360
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51225 tcgtggaccacagaaccctctgtcccctcctgagcctctgtcccttctccccctgcttgg 51166

                                                                         
Query: 2361  tggccatgaaaggtctcatgtgccccatactctgctctggatgctgtgagcataatgctg 2420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51165 tggccatgaaaggtctcatgtgccccatactctgctctggatgctgtgagcataatgctg 51106

                                                                         
Query: 2421  gctcaggaagagaggatgtgagggacagaaacaggctcccggggctcacctttcttcctc 2480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51105 gctcaggaagagaggatgtgagggacagaaacaggctcccggggctcacctttcttcctc 51046

                                                                         
Query: 2481  ggcatcatcttggttttagggggccctggacagcacccaacccgagagcctggggcgcct 2540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51045 ggcatcatcttggttttagggggccctggacagcacccaacccgagagcctggggcgcct 50986

                                                                         
Query: 2541  acagagctgcaggtcttaccccccaggccacgcactgtgccatccttggtgccatcttcc 2600
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50985 acagagctgcaggtcttaccccccaggccacgcactgtgccatccttggtgccatcttcc 50926

                                                                         
Query: 2601  ctgccgtgccggcagcctggacccgccccacccctgttgggctgaggattgggctcccaa 2660
             |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 50925 ctgccgtgccggcagcctggacccaccccacccctggtgggctgaggattgggctcccaa 50866

                                                                         
Query: 2661  gcagcacagaccactgtccccaccaccctctcccctgaagggatgtgactttctttctgg 2720
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50865 gcagcacagaccactgtccccaccaccctctcccctgaagggatgtgactttctttctgg 50806

                                                                         
Query: 2721  actgtttgtattgaaacaa----agtagtgtcaaataaagccctgatggggccctgggcc 2776
             |||||||||||||||||||    |||||||||||| ||||||||||||||||||||||||
Sbjct: 50805 actgtttgtattgaaacaaagtnagtagtgtcaaacaaagccctgatggggccctgggcc 50746

                         
Query: 2777  tctgttggtctg 2788
             ||||||||||||
Sbjct: 50745 tctgttggtctg 50734



 Score =  583 bits (294), Expect = e-163
 Identities = 294/294 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1570  aggatcgctatggttcctactgatccagggtcatggctcagacgtatggtgttgacagca 1629
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52039 aggatcgctatggttcctactgatccagggtcatggctcagacgtatggtgttgacagca 51980

                                                                         
Query: 1630  gcaaaaacctcatgattcccaggcctgggatgcttgcctcgtggaagctggggaggaatg 1689
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51979 gcaaaaacctcatgattcccaggcctgggatgcttgcctcgtggaagctggggaggaatg 51920

                                                                         
Query: 1690  gttcttttttacatgtggtgtgtgagtggggtggcctttgaggatctcgggtgagggatg 1749
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51919 gttcttttttacatgtggtgtgtgagtggggtggcctttgaggatctcgggtgagggatg 51860

                                                                         
Query: 1750  ggcgggtaccagcccctgacctctgcctggagactgagcccttattctcctccctcacac 1809
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51859 ggcgggtaccagcccctgacctctgcctggagactgagcccttattctcctccctcacac 51800

                                                                   
Query: 1810  ctccacccctgtgtgctaggttctcgttcttccactcctgccccaaagctgctg 1863
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51799 ctccacccctgtgtgctaggttctcgttcttccactcctgccccaaagctgctg 51746



 Score =  270 bits (136), Expect = 4e-69
 Identities = 136/136 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1097  gtacaaggacaaccccttttccctgggggagagttttggttcccgctgggatgcagatgc 1156
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54416 gtacaaggacaaccccttttccctgggggagagttttggttcccgctgggatgcagatgc 54357

                                                                         
Query: 1157  tgcctggggtatggacaggatggaggagaaggagccagaagtgaccatctcaagcatccg 1216
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54356 tgcctggggtatggacaggatggaggagaaggagccagaagtgaccatctcaagcatccg 54297

                             
Query: 1217  gcccatttcagaaagg 1232
             ||||||||||||||||
Sbjct: 54296 gcccatttcagaaagg 54281



 Score =  266 bits (134), Expect = 6e-68
 Identities = 134/134 (100%)
 Strand = Plus / Minus

                                                                         
Query: 966   agctctgtttcccactcggtgctgtctgagatgcaggtgatcgagcaggaaaccccagtg 1025
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54626 agctctgtttcccactcggtgctgtctgagatgcaggtgatcgagcaggaaaccccagtg 54567

                                                                         
Query: 1026  agtgcaaaatcctcccgctcgcagctggacttgttcgacgatgttggtactttcgcctct 1085
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54566 agtgcaaaatcctcccgctcgcagctggacttgttcgacgatgttggtactttcgcctct 54507

                           
Query: 1086  ggacccccaaagta 1099
             ||||||||||||||
Sbjct: 54506 ggacccccaaagta 54493



 Score =  264 bits (133), Expect = 2e-67
 Identities = 133/133 (100%)
 Strand = Plus / Minus

                                                                         
Query: 293   gacagctttcttccgccaacatggatgcacagccaatgatgccaacaccaaatataatag 352
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57974 gacagctttcttccgccaacatggatgcacagccaatgatgccaacaccaaatataatag 57915

                                                                         
Query: 353   cagagctgcccagatgtaccgggaaaagatccggcagctggggagtgcggccctggctag 412
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57914 cagagctgcccagatgtaccgggaaaagatccggcagctggggagtgcggccctggctag 57855

                          
Query: 413   gcatggcactgat 425
             |||||||||||||
Sbjct: 57854 gcatggcactgat 57842



 Score =  256 bits (129), Expect = 6e-65
 Identities = 129/129 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1230  agggtcacaaaccggagggaagtggaaagccggagctcaggccttgagtcgagtgaggca 1289
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53165 agggtcacaaaccggagggaagtggaaagccggagctcaggccttgagtcgagtgaggca 53106

                                                                         
Query: 1290  cggcagaaatttgcaggagccaaagccatctcatctgacatgttctttgggcgggaggta 1349
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53105 cggcagaaatttgcaggagccaaagccatctcatctgacatgttctttgggcgggaggta 53046

                      
Query: 1350  gattctgag 1358
             |||||||||
Sbjct: 53045 gattctgag 53037



 Score =  244 bits (123), Expect = 2e-61
 Identities = 123/123 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1450  caggtagcgtatctctggggaatgtgctgcccacggctgacattgcccagtttaagcagg 1509
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52684 caggtagcgtatctctggggaatgtgctgcccacggctgacattgcccagtttaagcagg 52625

                                                                         
Query: 1510  gtgtcaagtctgtggccgggaagatggctgtgctggccaatggtgtgatgaattctttgc 1569
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52624 gtgtcaagtctgtggccgggaagatggctgtgctggccaatggtgtgatgaattctttgc 52565

                
Query: 1570  agg 1572
             |||
Sbjct: 52564 agg 52562



 Score =  244 bits (123), Expect = 2e-61
 Identities = 123/123 (100%)
 Strand = Plus / Minus

                                                                         
Query: 100   aggcctgttttgactgtggcgccaagaatccgagttgggctagcatcacgtatggtgttt 159
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59297 aggcctgttttgactgtggcgccaagaatccgagttgggctagcatcacgtatggtgttt 59238

                                                                         
Query: 160   tcttgtgcattgattgctccggggtgcatcgctccctgggcgtccatctcagcttcatca 219
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59237 tcttgtgcattgattgctccggggtgcatcgctccctgggcgtccatctcagcttcatca 59178

                
Query: 220   ggt 222
             |||
Sbjct: 59177 ggt 59175



 Score =  198 bits (100), Expect = 1e-47
 Identities = 100/100 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1357  agtatgaagccagatctcggctacagcagctctcaggcagcagtgccatcagctcttcag 1416
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52881 agtatgaagccagatctcggctacagcagctctcaggcagcagtgccatcagctcttcag 52822

                                                     
Query: 1417  acctctttggggacatggatggagctcatggagcaggtag 1456
             ||||||||||||||||||||||||||||||||||||||||
Sbjct: 52821 acctctttggggacatggatggagctcatggagcaggtag 52782



 Score =  163 bits (82), Expect = 6e-37
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                         
Query: 507   ccccctgcctggagtgcaccagctactgatctgtctgagacccagcagccagccccatct 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56876 ccccctgcctggagtgcaccagctactgatctgtctgagacccagcagccagccccatct 56817

                                   
Query: 567   gcagagagcagtggcctggcac 588
             ||||||||||||||||||||||
Sbjct: 56816 gcagagagcagtggcctggcac 56795



 Score =  161 bits (81), Expect = 3e-36
 Identities = 81/81 (100%)
 Strand = Plus / Minus

                                                                         
Query: 426   ctttggatagacaatatgagtagtgctcccagccactccccagagaagaaggactctgat 485
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57754 ctttggatagacaatatgagtagtgctcccagccactccccagagaagaaggactctgat 57695

                                  
Query: 486   ttcttctccgaacacactcaa 506
             |||||||||||||||||||||
Sbjct: 57694 ttcttctccgaacacactcaa 57674



 Score =  151 bits (76), Expect = 2e-33
 Identities = 76/76 (100%)
 Strand = Plus / Minus

                                                                         
Query: 218   caggtccacagagttggattccaactggaactggttccagctgaggtgtatgcaggtcgg 277
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58562 caggtccacagagttggattccaactggaactggttccagctgaggtgtatgcaggtcgg 58503

                             
Query: 278   cgggaatgccaatgcg 293
             ||||||||||||||||
Sbjct: 58502 cgggaatgccaatgcg 58487



 Score =  141 bits (71), Expect = 2e-30
 Identities = 71/71 (100%)
 Strand = Plus / Minus

                                                                         
Query: 32    ggcggccgagccgagcaagacagagatccaaactctttttaagaggcttcgcgcaattcc 91
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59534 ggcggccgagccgagcaagacagagatccaaactctttttaagaggcttcgcgcaattcc 59475

                        
Query: 92    aaccaacaagg 102
             |||||||||||
Sbjct: 59474 aaccaacaagg 59464



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 40/40 (100%)
 Strand = Plus / Minus

                                                     
Query: 589   aaccagagcacggccccaacatggacctgcttggcacctc 628
             ||||||||||||||||||||||||||||||||||||||||
Sbjct: 56517 aaccagagcacggccccaacatggacctgcttggcacctc 56478


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 84,176,657
Number of extensions: 698
Number of successful extensions: 698
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 697
Number of HSP's successfully gapped: 30
Length of query: 2788
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2766
Effective length of database: 2,808,408,574
Effective search space: 7768058115684
Effective search space used: 7768058115684
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)