Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008486
(1184 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001030547.2| MAS-related GPR, member F [Bos taurus]. 573 e-163
Alignment gi|XP_002690422.1| PREDICTED: MAS proto-oncogene-like [Bos taur... 156 3e-38
Alignment gi|XP_001250741.1| PREDICTED: MAS proto-oncogene-like [Bos taur... 156 3e-38
Alignment gi|XP_002699483.1| PREDICTED: MAS proto-oncogene-like [Bos taur... 152 7e-37
Alignment gi|XP_872867.2| PREDICTED: MAS proto-oncogene-like [Bos taurus]. 152 7e-37
Alignment gi|XP_001251666.1| PREDICTED: MAS proto-oncogene-like [Bos taur... 134 2e-31
Alignment gi|XP_002699482.1| PREDICTED: MAS proto-oncogene-like [Bos taur... 130 3e-30
Alignment gi|XP_583823.5| PREDICTED: MAS proto-oncogene-like [Bos taurus]. 130 3e-30
Alignment gi|NP_001179379.1| mas-related G-protein coupled receptor membe... 127 3e-29
Alignment gi|XP_002699130.1| PREDICTED: MAS-related GPR, member X2-like [... 127 3e-29
>ref|NP_001030547.2| MAS-related GPR, member F [Bos taurus].
Length = 343
Score = 573 bits (1476), Expect = e-163
Identities = 278/323 (86%), Positives = 292/323 (90%)
Frame = +3
Query: 216 MAGNCSWDAHPTNRNKMCPGVSEAPELYSRGFLTIEQITMLPPPAVMNYIFXXXXXXXXX 395
MAGNCSW+AHPTN NKMCPGVSEAPELYSRGFLTIEQITMLPPPA+MNYIF
Sbjct: 1 MAGNCSWEAHPTNWNKMCPGVSEAPELYSRGFLTIEQITMLPPPAIMNYIFLLLCLCGLV 60
Query: 396 XXXXXXWFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCR 575
WFFGFSIKRSPFS+YFLHLASADVGYLFSKAVFS+LNTGGFL FADYVRAV R
Sbjct: 61 GNGLVLWFFGFSIKRSPFSVYFLHLASADVGYLFSKAVFSILNTGGFLGPFADYVRAVSR 120
Query: 576 ILGLCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNY 755
I+GLCM +TGVSLLPAIS ERCLSV+FP WYWRRRPKRLSAVVCSLLWALSLLVT +HNY
Sbjct: 121 IVGLCMVLTGVSLLPAISSERCLSVVFPTWYWRRRPKRLSAVVCSLLWALSLLVTCVHNY 180
Query: 756 FCVFLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLN 935
FCVFLG +A SGAGC HMD FLGILLFLVFCPLMVLPCLALIL VECRARRRQRSAKLN
Sbjct: 181 FCVFLGRQA--SGAGCTHMDAFLGILLFLVFCPLMVLPCLALILHVECRARRRQRSAKLN 238
Query: 936 HVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK 1115
HV+LA+VSVFLVSSIYLGIDWFLFWVF+IPAPFPEYVTDLC+CINS AKPVVYFLAGRDK
Sbjct: 239 HVILAVVSVFLVSSIYLGIDWFLFWVFRIPAPFPEYVTDLCLCINSCAKPVVYFLAGRDK 298
Query: 1116 SQRLWEPLKVVFQRALRDGAELG 1184
SQRLWEPL+VVFQRALRDGAE G
Sbjct: 299 SQRLWEPLRVVFQRALRDGAEPG 321
>ref|XP_002690422.1| PREDICTED: MAS proto-oncogene-like [Bos taurus].
Length = 325
Score = 156 bits (395), Expect = 3e-38
Identities = 94/253 (37%), Positives = 141/253 (55%), Gaps = 1/253 (0%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGF-LSTFADYVRAVCRILGLC 590
WF F ++R+PF++Y HL+ AD+ LF + SV + LS+ Y + L
Sbjct: 55 WFLCFRMRRNPFTVYITHLSIADISLLFCIFILSVDYALDYELSSGYYYTIVTLSVTFLF 114
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
+ TG+ LL AIS+ERCLSVL+P WY RPK SA VC+LLWALS LVT++ C+
Sbjct: 115 GYNTGLYLLTAISVERCLSVLYPIWYRCHRPKHQSAFVCALLWALSCLVTTMEYVMCIDS 174
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
+ G CR + F+ IL FLVF PLMV+ L++++ + S+KL V+
Sbjct: 175 EGQTHSRG-DCRAVIIFIAILSFLVFTPLMVVSSTILVVKIR-KNSWASHSSKLYLVITV 232
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQRLW 1130
+ +F + ++ + + + L++ + +V+ L INSSA P +YF G + +R
Sbjct: 233 TIIIFFIFAMPMRLLYLLYYEYWSTFKNLHHVSLLFSTINSSANPFIYFFVGSSRKKRFK 292
Query: 1131 EPLKVVFQRALRD 1169
E LKVV RA +D
Sbjct: 293 ESLKVVLTRAFKD 305
>ref|XP_001250741.1| PREDICTED: MAS proto-oncogene-like [Bos taurus].
Length = 325
Score = 156 bits (395), Expect = 3e-38
Identities = 94/253 (37%), Positives = 141/253 (55%), Gaps = 1/253 (0%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGF-LSTFADYVRAVCRILGLC 590
WF F ++R+PF++Y HL+ AD+ LF + SV + LS+ Y + L
Sbjct: 55 WFLCFRMRRNPFTVYITHLSIADISLLFCIFILSVDYALDYELSSGYYYTIVTLSVTFLF 114
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
+ TG+ LL AIS+ERCLSVL+P WY RPK SA VC+LLWALS LVT++ C+
Sbjct: 115 GYNTGLYLLTAISVERCLSVLYPIWYRCHRPKHQSAFVCALLWALSCLVTTMEYVMCIDS 174
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
+ G CR + F+ IL FLVF PLMV+ L++++ + S+KL V+
Sbjct: 175 EGQTHSRG-DCRAVIIFIAILSFLVFTPLMVVSSTILVVKIR-KNSWASHSSKLYLVITV 232
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQRLW 1130
+ +F + ++ + + + L++ + +V+ L INSSA P +YF G + +R
Sbjct: 233 TIIIFFIFAMPMRLLYLLYYEYWSTFKNLHHVSLLFSTINSSANPFIYFFVGSSRKKRFK 292
Query: 1131 EPLKVVFQRALRD 1169
E LKVV RA +D
Sbjct: 293 ESLKVVLTRAFKD 305
>ref|XP_002699483.1| PREDICTED: MAS proto-oncogene-like [Bos taurus].
Length = 319
Score = 152 bits (383), Expect = 7e-37
Identities = 102/261 (39%), Positives = 139/261 (53%), Gaps = 5/261 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W G +RSPFS+Y LHL AD+ +L A +L ++ + V R +
Sbjct: 48 WLLGSQGQRSPFSVYILHLGVADLLFLLCMASKVILICFQLVNRIHMALDIVSR-MKYFT 106
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCV-FL 770
+ +SLL IS++RCLSVLFP WY +PK LSAVVC+LLW LSLL+ ++ + C FL
Sbjct: 107 YTASLSLLTVISMQRCLSVLFPVWYKCHQPKHLSAVVCALLWVLSLLLNTVAMFLCSDFL 166
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVE-CRARRRQRSAKLNHVVL 947
+ C +D + ILL VF PLM L L + V+ +R ++ VL
Sbjct: 167 ARDE----LLCFRIDLVISILLMGVFTPLMAGSSLILCVGVQRSSTATHRRPTRVYVTVL 222
Query: 948 AMVSVFLVSSIYLGIDWFLFWVFQIPAPFP---EYVTDLCICINSSAKPVVYFLAGRDKS 1118
+ VFL ++ LGI WFL +P + L I+SSA PV+YFL GR KS
Sbjct: 223 VCILVFLAFALPLGICWFLISWLDLPQKTKTVFSLLARLFSAISSSANPVIYFLVGRRKS 282
Query: 1119 QRLWEPLKVVFQRALRDGAEL 1181
+ L EPL V +RALR+ EL
Sbjct: 283 RGLREPLGAVLRRALREEPEL 303
>ref|XP_872867.2| PREDICTED: MAS proto-oncogene-like [Bos taurus].
Length = 319
Score = 152 bits (383), Expect = 7e-37
Identities = 102/261 (39%), Positives = 139/261 (53%), Gaps = 5/261 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W G +RSPFS+Y LHL AD+ +L A +L ++ + V R +
Sbjct: 48 WLLGSQGQRSPFSVYILHLGVADLLFLLCMASKVILICFQLVNRIHMALDIVSR-MKYFT 106
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCV-FL 770
+ +SLL IS++RCLSVLFP WY +PK LSAVVC+LLW LSLL+ ++ + C FL
Sbjct: 107 YTASLSLLTVISMQRCLSVLFPVWYKCHQPKHLSAVVCALLWVLSLLLNTVAMFLCSDFL 166
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVE-CRARRRQRSAKLNHVVL 947
+ C +D + ILL VF PLM L L + V+ +R ++ VL
Sbjct: 167 ARDE----LLCFRIDLVISILLMGVFTPLMAGSSLILCVGVQRSSTATHRRPTRVYVTVL 222
Query: 948 AMVSVFLVSSIYLGIDWFLFWVFQIPAPFP---EYVTDLCICINSSAKPVVYFLAGRDKS 1118
+ VFL ++ LGI WFL +P + L I+SSA PV+YFL GR KS
Sbjct: 223 VCILVFLAFALPLGICWFLISWLDLPQKTKTVFSLLARLFSAISSSANPVIYFLVGRRKS 282
Query: 1119 QRLWEPLKVVFQRALRDGAEL 1181
+ L EPL V +RALR+ EL
Sbjct: 283 RGLREPLGAVLRRALREEPEL 303
>ref|XP_001251666.1| PREDICTED: MAS proto-oncogene-like [Bos taurus].
Length = 285
Score = 134 bits (337), Expect = 2e-31
Identities = 83/252 (32%), Positives = 126/252 (50%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
WF F ++R+PF++Y HL+ AD+ LF C+
Sbjct: 55 WFLCFRMRRNPFTVYITHLSIADISLLF------------------------------CI 84
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
F+ +ERCLSVL+P WY RPK SA VC+LLWALS LVT++ C+
Sbjct: 85 FIL---------VERCLSVLYPIWYRCHRPKHQSAFVCALLWALSCLVTTMEYVMCIDSE 135
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLAM 953
+ G CR + F+ IL FLVF PLMV+ L++++ + S+KL V+
Sbjct: 136 GQTHSRG-DCRAVIIFIAILSFLVFTPLMVVSSTILVVKIR-KNSWASHSSKLYLVITVT 193
Query: 954 VSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQRLWE 1133
+ +F + ++ + + + L++ + +V+ L INSSA P +YF G + +R E
Sbjct: 194 IIIFFIFAMPMRLLYLLYYEYWSTFKNLHHVSLLFSTINSSANPFIYFFVGSSRKKRFKE 253
Query: 1134 PLKVVFQRALRD 1169
LKVV RA +D
Sbjct: 254 SLKVVLTRAFKD 265
>ref|XP_002699482.1| PREDICTED: MAS proto-oncogene-like [Bos taurus].
Length = 321
Score = 130 bits (326), Expect = 3e-30
Identities = 89/260 (34%), Positives = 126/260 (48%), Gaps = 4/260 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W GF +R P IY LHLA AD+ +L A+ +VL+T + R G
Sbjct: 49 WLLGFQRRRGPLGIYLLHLAVADLLFLLCSAMLTVLSTSSWGIHMHRLGPRAVRSAGYLA 108
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
+ +SLL A S + CL LFP WY R +RLSA VC++ W L++L+ YF
Sbjct: 109 YTVSLSLLTAASAQSCLPGLFPTWYRGRWHRRLSAAVCAVFWLLAVLLIVPAWYFHDEAE 168
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRS-AKLNHVVLA 950
H S G+ +T L + F P+M L +AL +QV+ + QR +L VL
Sbjct: 169 HPHSWLGS---KAETVLHFFTLVSFTPIMALSGMALCIQVQRSSPPWQRPLTRLYVAVLL 225
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPE---YVTDLCICINSSAKPVVYFLAGRDKSQ 1121
V VF ++ LGI FL + +P + T + ++SS KP++YFL G
Sbjct: 226 CVFVFFACALPLGISGFLLYWLDLPQSAKTLFGHFTCFSLSVSSSTKPMIYFLVGSGGRL 285
Query: 1122 RLWEPLKVVFQRALRDGAEL 1181
L EPL V R L++ EL
Sbjct: 286 SLREPLGAVLSRVLQEEPEL 305
>ref|XP_583823.5| PREDICTED: MAS proto-oncogene-like [Bos taurus].
Length = 321
Score = 130 bits (326), Expect = 3e-30
Identities = 89/260 (34%), Positives = 126/260 (48%), Gaps = 4/260 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W GF +R P IY LHLA AD+ +L A+ +VL+T + R G
Sbjct: 49 WLLGFQRRRGPLGIYLLHLAVADLLFLLCSAMLTVLSTSSWGIHMHRLGPRAVRSAGYLA 108
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
+ +SLL A S + CL LFP WY R +RLSA VC++ W L++L+ YF
Sbjct: 109 YTVSLSLLTAASAQSCLPGLFPTWYRGRWHRRLSAAVCAVFWLLAVLLIVPAWYFHDEAE 168
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRS-AKLNHVVLA 950
H S G+ +T L + F P+M L +AL +QV+ + QR +L VL
Sbjct: 169 HPHSWLGS---KAETVLHFFTLVSFTPIMALSGMALCIQVQRSSPPWQRPLTRLYVAVLL 225
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPE---YVTDLCICINSSAKPVVYFLAGRDKSQ 1121
V VF ++ LGI FL + +P + T + ++SS KP++YFL G
Sbjct: 226 CVFVFFACALPLGISGFLLYWLDLPQSAKTLFGHFTCFSLSVSSSTKPMIYFLVGSGGRL 285
Query: 1122 RLWEPLKVVFQRALRDGAEL 1181
L EPL V R L++ EL
Sbjct: 286 SLREPLGAVLSRVLQEEPEL 305
>ref|NP_001179379.1| mas-related G-protein coupled receptor member X2 [Bos taurus].
Length = 342
Score = 127 bits (318), Expect = 3e-29
Identities = 96/268 (35%), Positives = 142/268 (52%), Gaps = 11/268 (4%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSV--LNTGGFLSTFADYVRAVCRILGL 587
W GF ++R+ F++Y L+LA+AD L + + S+ L S+ + +V
Sbjct: 65 WLLGFHLRRNAFTVYILNLAAADFLCLCCQVIDSLEALIACCSASSIPSFFTSVMTFA-- 122
Query: 588 CMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVF 767
++ G+SLL AIS ERC+SVL P WY RP LSA+VC++LWAL+LL++ + +C F
Sbjct: 123 --YLAGLSLLSAISTERCVSVLCPVWYRCHRPTHLSAIVCTVLWALALLLSILEGKYCGF 180
Query: 768 LGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVL 947
L S C+ D F+ + L+ LAL+L++ +++ Q + +L V
Sbjct: 181 L--LTDFSHLWCQVFD-FIAAGWMMFLFGLLAGSSLALLLRILFKSQYIQLT-RLYVTVG 236
Query: 948 AMVSVFLVSSIYLGIDWF-LFWV----FQIPAPFPEYVTDLCICINSSAKPVVYFLAG-- 1106
V FL+ + GI WF L W+ F IP V L CINSS P++YF G
Sbjct: 237 LTVLAFLLCGLPYGILWFLLIWIQDDLFAIPCHNCLVVFGLS-CINSSINPIIYFFVGSF 295
Query: 1107 --RDKSQRLWEPLKVVFQRALRDGAELG 1184
R +R + LKVV QRAL D +E+G
Sbjct: 296 RQRQTKKRGQQTLKVVLQRALEDISEVG 323
>ref|XP_002699130.1| PREDICTED: MAS-related GPR, member X2-like [Bos taurus].
Length = 342
Score = 127 bits (318), Expect = 3e-29
Identities = 96/268 (35%), Positives = 142/268 (52%), Gaps = 11/268 (4%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSV--LNTGGFLSTFADYVRAVCRILGL 587
W GF ++R+ F++Y L+LA+AD L + + S+ L S+ + +V
Sbjct: 65 WLLGFHLRRNAFTVYILNLAAADFLCLCCQVIDSLEALIACCSASSIPSFFTSVMTFA-- 122
Query: 588 CMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVF 767
++ G+SLL AIS ERC+SVL P WY RP LSA+VC++LWAL+LL++ + +C F
Sbjct: 123 --YLAGLSLLSAISTERCVSVLCPVWYRCHRPTHLSAIVCTVLWALALLLSILEGKYCGF 180
Query: 768 LGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVL 947
L S C+ D F+ + L+ LAL+L++ +++ Q + +L V
Sbjct: 181 L--LTDFSHLWCQVFD-FIAAGWMMFLFGLLAGSSLALLLRILFKSQYIQLT-RLYVTVG 236
Query: 948 AMVSVFLVSSIYLGIDWF-LFWV----FQIPAPFPEYVTDLCICINSSAKPVVYFLAG-- 1106
V FL+ + GI WF L W+ F IP V L CINSS P++YF G
Sbjct: 237 LTVLAFLLCGLPYGILWFLLIWIQDDLFAIPCHNCLVVFGLS-CINSSINPIIYFFVGSF 295
Query: 1107 --RDKSQRLWEPLKVVFQRALRDGAELG 1184
R +R + LKVV QRAL D +E+G
Sbjct: 296 RQRQTKKRGQQTLKVVLQRALEDISEVG 323
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 42,989,325
Number of extensions: 1243118
Number of successful extensions: 5508
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 5405
Number of HSP's successfully gapped: 23
Length of query: 394
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 290
Effective length of database: 14,240,222
Effective search space: 4129664380
Effective search space used: 4129664380
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008486
(1184 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_540805.2| PREDICTED: similar to Mas-related G-protein cou... 538 e-153
Alignment gi|XP_540806.1| PREDICTED: similar to MAS-related G-protein cou... 146 4e-35
Alignment gi|XP_542529.2| PREDICTED: similar to G protein-coupled recepto... 141 1e-33
Alignment gi|XP_855119.1| PREDICTED: similar to MAS proto-oncogene [Canis... 124 2e-28
Alignment gi|XP_540793.2| PREDICTED: similar to MAS-related GPR, member G... 109 4e-24
Alignment gi|NP_001003373.1| C5a anaphylatoxin chemotactic receptor [Cani... 75 2e-13
Alignment gi|NP_001041572.1| G protein-coupled receptor 44 [Canis lupus f... 71 2e-12
Alignment gi|XP_543447.2| PREDICTED: similar to Chemokine receptor-like 1... 68 1e-11
Alignment gi|XP_854487.1| PREDICTED: similar to FMLP-related receptor I (... 57 4e-08
Alignment gi|XP_854636.1| PREDICTED: similar to G protein-coupled recepto... 55 1e-07
>ref|XP_540805.2| PREDICTED: similar to Mas-related G-protein coupled receptor member F
(Mas-related gene F protein) [Canis familiaris].
Length = 327
Score = 538 bits (1385), Expect = e-153
Identities = 262/307 (85%), Positives = 275/307 (89%)
Frame = +3
Query: 264 MCPGVSEAPELYSRGFLTIEQITMLPPPAVMNYIFXXXXXXXXXXXXXXXWFFGFSIKRS 443
MCPG SEAPELYSRGFLTIEQI +LPPPAVMNYIF WFFGFSIKR+
Sbjct: 1 MCPGGSEAPELYSRGFLTIEQIALLPPPAVMNYIFLLLCLCGLVGNGLVLWFFGFSIKRT 60
Query: 444 PFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCMFVTGVSLLPA 623
PFS+YFLHLA ADVGYLFSKAVFS+LNTGGFL TFADY+RAV R+LGLC FV GVSLLPA
Sbjct: 61 PFSVYFLHLAGADVGYLFSKAVFSILNTGGFLGTFADYIRAVSRVLGLCTFVAGVSLLPA 120
Query: 624 ISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLGHEASGSGAGC 803
IS ERCLSVLFP WYWRRRPKRLSAVVC+LLW LSLLVTSIHNY CVFLG + GSGA C
Sbjct: 121 ISSERCLSVLFPVWYWRRRPKRLSAVVCTLLWTLSLLVTSIHNYLCVFLGRQ--GSGAAC 178
Query: 804 RHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLAMVSVFLVSSIY 983
RH+D FLGILLFLVFCPLMVLPCL LIL+VECRARRRQRSAKLNHV+LAMVSVFLVSSIY
Sbjct: 179 RHVDIFLGILLFLVFCPLMVLPCLLLILRVECRARRRQRSAKLNHVILAMVSVFLVSSIY 238
Query: 984 LGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQRLWEPLKVVFQRAL 1163
LGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPV+YFLAGRDKSQRLWEPL+VVFQRAL
Sbjct: 239 LGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVIYFLAGRDKSQRLWEPLRVVFQRAL 298
Query: 1164 RDGAELG 1184
RDGAELG
Sbjct: 299 RDGAELG 305
>ref|XP_540806.1| PREDICTED: similar to MAS-related G-protein coupled receptor, member
D [Canis familiaris].
Length = 349
Score = 146 bits (368), Expect = 4e-35
Identities = 93/262 (35%), Positives = 138/262 (52%), Gaps = 6/262 (2%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W ++R+PF Y LHLA AD+ +L A+ L + Y V + +
Sbjct: 76 WLLTCRMQRTPFCTYILHLAVADLLFLLCTAITICLE-----DSLLAY--EVMQRMKYFA 128
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
+ + LL AIS +RCLSVLFP WY +P+ LSAVVC++LWA+ LL+ + ++FC
Sbjct: 129 YTVSLGLLTAISTQRCLSVLFPIWYKCHQPQHLSAVVCAVLWAVFLLMNMLASFFCSKFW 188
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRS---AKLNHVV 944
H + C +D+ L+ VF P+M + L + V +R+ QR +L V
Sbjct: 189 HFKNEQ---CFIVDSTFSTLIMGVFTPVMTASSVTLFVLVRRSSRQWQRQRQPTRLYVVT 245
Query: 945 LAMVSVFLVSSIYLGIDWFLFWVFQIPAPFP---EYVTDLCICINSSAKPVVYFLAGRDK 1115
LA V VFL+ ++ LGI WFLF+ +P ++ ++SSA P++YF+ G
Sbjct: 246 LASVLVFLICALPLGISWFLFYWLLLPLELKSLFHHMATFSSAVSSSANPIIYFVVGSRG 305
Query: 1116 SQRLWEPLKVVFQRALRDGAEL 1181
+ L EPL V QRALR+ EL
Sbjct: 306 RRGLQEPLGTVLQRALREEPEL 327
>ref|XP_542529.2| PREDICTED: similar to G protein-coupled receptor MRGX2 [Canis
familiaris].
Length = 389
Score = 141 bits (355), Expect = 1e-33
Identities = 96/258 (37%), Positives = 141/258 (54%), Gaps = 6/258 (2%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
WF GF ++R+ FS+Y L+LA AD YL + V+S+ F ST + + +
Sbjct: 112 WFLGFRMRRNAFSVYILNLAGADFLYLSFQTVYSLEQLVNFHSTPLA-IPSFFTTVWTFA 170
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
++ +S+L AISLERCLS L P WY RPK SAV+C+LLWALSLL++ + +C FL
Sbjct: 171 YIASLSILSAISLERCLSALCPIWYRCHRPKHTSAVMCALLWALSLLLSILEGQYCGFLF 230
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLAM 953
+ CR D L +F L+ LAL+ ++ C ++R + +L V+
Sbjct: 231 LDL--DYGWCRAFDFITATWLIFLFV-LLSGSSLALLTRLLCSSQRVPLT-RLYVTVVLT 286
Query: 954 VSVFLVSSIYLGIDWFLFWVFQIPAP---FPEYVTDLCI-CINSSAKPVVYFLAG--RDK 1115
V FL+ + GI WFL + Q + + Y+ L + C+NS A PV+YF G R +
Sbjct: 287 VLAFLLCGLPFGIHWFLLFWIQTRSHVILWHLYLVALVLSCVNSCANPVIYFFVGSFRQR 346
Query: 1116 SQRLWEPLKVVFQRALRD 1169
R + LK+V QRAL+D
Sbjct: 347 WPRRQKTLKMVLQRALQD 364
>ref|XP_855119.1| PREDICTED: similar to MAS proto-oncogene [Canis familiaris].
Length = 304
Score = 124 bits (310), Expect = 2e-28
Identities = 84/253 (33%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGF-LSTFADYVRAVCRILGLC 590
WF F ++R+PF++Y HL+ AD+ LF + SV + LS+ Y + L
Sbjct: 55 WFLCFRMRRNPFTVYITHLSIADISLLFCIFILSVDYALDYELSSGYYYTIVTLSVTFLF 114
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
+ TG+ LL AIS+ERCLSVL+P WY RPK SA VC+LLWALS LVT++ +
Sbjct: 115 GYNTGLYLLTAISVERCLSVLYPIWYRCHRPKHQSAFVCALLWALSCLVTTME----YVI 170
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
E G L +L + V ++V+ + S+KL V++
Sbjct: 171 HSELPG-----------LSLLSWWVSSTILVIKIR--------KNTWTAHSSKLYIVIMV 211
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQRLW 1130
+ +FL+ ++ + + + L++ + +++ L INSSA P +YF G + +R
Sbjct: 212 TIIIFLIFAMPMRLLYLLYYEYWSAFGNLHHISLLFSTINSSANPFIYFFVGSSRKKRFK 271
Query: 1131 EPLKVVFQRALRD 1169
E LKVV RA +D
Sbjct: 272 ESLKVVLTRAFKD 284
>ref|XP_540793.2| PREDICTED: similar to MAS-related GPR, member G [Canis familiaris].
Length = 956
Score = 109 bits (273), Expect = 4e-24
Identities = 86/263 (32%), Positives = 129/263 (49%), Gaps = 6/263 (2%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W GF IK+ PFS+Y LHLA+AD +L + FS+ L + + AV +
Sbjct: 328 WHLGFHIKKGPFSVYVLHLAAADFLFLGFQVGFSIAQAA--LGSKDNLYFAVTFV----G 381
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
F G+ LL A++ ERCLS+LFP Y RP+ S V+C L+WAL+ + + C L
Sbjct: 382 FAVGLWLLAALNAERCLSLLFPTCYQGHRPRHTSGVICGLVWALTPPAVLLPAHTCGLL- 440
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLAM 953
AS C L + C V L L + V C ++R + + +
Sbjct: 441 -RASKRPLTCLRYHAASVTWLLSLACVACVAG-LVLFIWVACCSQR----PRPQFFGVTV 494
Query: 954 VSVFLVSSIYLGIDWFLFW------VFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK 1115
S L+ + G+ L+W F +PA FP V L C++ SAKP+++F+AGR
Sbjct: 495 GSALLL--CFCGLPLVLYWSLQPLLSFPLPAFFPLAV--LLACVHGSAKPLLHFMAGRRP 550
Query: 1116 SQRLWEPLKVVFQRALRDGAELG 1184
R +PL+ + QR+L + A+ G
Sbjct: 551 GPR--QPLRALLQRSLGEQAQRG 571
>ref|NP_001003373.1| C5a anaphylatoxin chemotactic receptor [Canis lupus familiaris].
Length = 352
Score = 74.7 bits (182), Expect = 2e-13
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 19/271 (7%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILG--- 584
W GF ++R+ +I+FL+LA AD L S +L + + + A CRIL
Sbjct: 61 WVTGFEVRRTINAIWFLNLAVAD---LLSCLALPILFSSIVQQGYWPFGNAACRILPSLI 117
Query: 585 LCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVT-------S 743
L + LL IS +R + V P W R +L+ CS+ WA++LL+T
Sbjct: 118 LLNMYASILLLTTISADRFVLVFNPIWCQNYRGPQLAWAACSVAWAVALLLTVPSFIFRG 177
Query: 744 IHNYFCVF---LGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRR 914
+H + F G + SG G L +L+ + PL++L L + +R+
Sbjct: 178 VHTEYFPFWMTCGVDYSGVGVLVERGVAILRLLMGFL-GPLVILSICYTFLLIRTWSRKA 236
Query: 915 QRSAKLNHVVLAMVSVFLVSSI---YLGIDWFLFWVFQIPAPFPEYVTDLCIC---INSS 1076
RS K VV+A+V F V + G+ LF+ + LC+ IN
Sbjct: 237 TRSTKTLKVVVAVVVSFFVLWLPYQVTGMMMALFYKHSESFRRVSRLDSLCVAVAYINCC 296
Query: 1077 AKPVVYFLAGRDKSQRLWEPLKVVFQRALRD 1169
P++Y LA + R + L ++ L +
Sbjct: 297 INPIIYVLAAQGFHSRFLKSLPARLRQVLAE 327
>ref|NP_001041572.1| G protein-coupled receptor 44 [Canis lupus familiaris].
Length = 400
Score = 70.9 bits (172), Expect = 2e-12
Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 32/286 (11%)
Frame = +3
Query: 423 GFSIKRSPFSIYFLHLASADVGYLFSKAVFSV-LNTGGFLSTFADYVRAVCRILGLCMFV 599
G ++++ + + LHLA +D+ + F+ L G + + I L MF
Sbjct: 58 GCRMRQTVVTTWVLHLALSDLLATATLPFFTYFLAVGHSWELGTTFCKLHSSIFFLNMFA 117
Query: 600 TGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVT------------- 740
+G LL AISL+RCL V+ P W R ++ VC LWAL++L T
Sbjct: 118 SGF-LLSAISLDRCLQVVRPVWAQNHRTVAMAHRVCLGLWALAVLNTVPYFVFRDTIPRL 176
Query: 741 --SIHNYFCVFLGHEASGSGAGCRHMDTFLGILLFLV--FCPLMVLPCLALILQVECRAR 908
I Y+ V L + A C L + FLV PL ++ ++ + R
Sbjct: 177 DGRIMCYYNVLLLNPGPDRDATCNTRQAALAVSKFLVAFVVPLAIIASSHFLVSAQLCHR 236
Query: 909 RRQRSAKLNHVVLAMVSVFLVSSIYLGIDWFLFWVFQI--------PAPFP------EYV 1046
R+R ++ +V A+V+ F + W + VF + P+ P +V
Sbjct: 237 GRRRPSRFVRLVAAVVAAF-------ALCWGPYHVFSLLEARAHADPSLRPLVWRGLPFV 289
Query: 1047 TDLCICINSSAKPVVYFLAGRDKSQRLWEPLKVVFQRALRDGAELG 1184
T L +NS P++Y L D ++L L+ V + L D +ELG
Sbjct: 290 TSLAF-LNSVINPLLYVLTCPDVLRKLRRSLRSVLESVLLDDSELG 334
>ref|XP_543447.2| PREDICTED: similar to Chemokine receptor-like 1 (G-protein coupled
receptor DEZ) (G-protein coupled receptor ChemR23) [Canis
familiaris].
Length = 365
Score = 68.2 bits (165), Expect = 1e-11
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 31/260 (11%)
Frame = +3
Query: 426 FSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCMFVTG 605
F +K++ +++FL+LA AD + + + F + + L + T
Sbjct: 65 FKMKKTVNAVWFLNLAVADFLFNIFLPIHIAYAAMDYHWVFGTAMCKISNFLLIHNMYTS 124
Query: 606 VSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTS----------IHNY 755
V LL AIS +RC+SVL P W R RL++V C+L+W L+ ++S +H
Sbjct: 125 VFLLTAISFDRCISVLLPVWSQNHRSVRLASVACALIWVLAFFLSSPSLIFRDTALVHEK 184
Query: 756 FCVFLGHEASGSGAG-------------CRHMDTFLGILLFLVFCPLMVLPCLALILQVE 896
F S SG+ RHM + L P++++ + +
Sbjct: 185 ISCFNNFSLSASGSAPWPAHSRLDPVGFSRHMVVTVTRFLCGFLVPVLIITACYFTIVCK 244
Query: 897 CRARRRQRSAKLNHVVLAMVSVFLVSSIYLGIDWFLFWVFQI-PAPFPEYVTDLCICI-- 1067
R R ++ K V++ +++ F + + + ++ ++ A P V L + +
Sbjct: 245 LRRNRLAKTRKPFKVIVTIITTFFL----CWCPYHMLYLLELHHAAMPGSVFSLGLPLAT 300
Query: 1068 -----NSSAKPVVYFLAGRD 1112
NS P++Y G+D
Sbjct: 301 AIAIANSCMNPILYVFMGQD 320
>ref|XP_854487.1| PREDICTED: similar to FMLP-related receptor I (FMLP-R-I) (Lipoxin A4
receptor) (LXA4 receptor) (Formyl peptide receptor-like
1) (RFP) (HM63) [Canis familiaris].
Length = 351
Score = 56.6 bits (135), Expect = 4e-08
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 27/279 (9%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W GF + R+ +I +L+LA AD + + V L F ++ V I+
Sbjct: 49 WVAGFRMARTVTTICYLNLALADFSFTATLPFLIVSMAMRELWPFGWFLCKVVHIVVDIN 108
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVT----------- 740
V L+ I+L+RC+ VL P W R L++ V W L+L++T
Sbjct: 109 LFGSVFLIAFIALDRCICVLHPVWAQNHRTVSLASKVIIGPWILALILTLPVFIFLTTVN 168
Query: 741 -SIHNYFCVF----LGHEASGSGAGCRHMDTFLGILLFLV--FCPLMVLPCLALILQVEC 899
N +C F G+ M T GI+ F++ P+ ++ ++ +
Sbjct: 169 DGTGNIYCTFNFASWGNSIEERLKVAITMLTARGIIRFIIGFSMPMSIVAICYGLIAAKI 228
Query: 900 RARRRQRSAKLNHVVLAMVSVFLVS------SIYLGIDWFLFWVFQIPAPFPEYV---TD 1052
+ +S++ V+ A+V+ F + LG W +F+ + + T
Sbjct: 229 HKKGMIKSSRPLRVLTAVVASFFLCWFPFQLIALLGTVWLKEMLFEGKYKILDVLVNPTS 288
Query: 1053 LCICINSSAKPVVYFLAGRDKSQRLWEPLKVVFQRALRD 1169
NS P++Y G+D +RL L +RAL +
Sbjct: 289 SLAFFNSCLNPMLYVFMGQDFRERLIHSLPASLERALSE 327
>ref|XP_854636.1| PREDICTED: similar to G protein-coupled receptor 152 [Canis
familiaris].
Length = 469
Score = 55.1 bits (131), Expect = 1e-07
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 23/244 (9%)
Frame = +3
Query: 450 SIYFLHLASADVGYLFSKAVFSVLNT--GGFLSTFADYVRAVCRILGLCMFVTGVSLLPA 623
++ L LA +D +L + AVF +L GG R + G+ + +G+ LL A
Sbjct: 67 ALLLLSLALSDFLFL-AAAVFQILEIQHGGHWPLGTAACRFYYFLWGVS-YSSGLFLLAA 124
Query: 624 ISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVT---------SIHNYFCVFLGH 776
+SL+RCL L P WY RRP RL VC+ +W L+ L + ++ Y V
Sbjct: 125 LSLDRCLLALCPRWYPGRRPARLPLWVCAGVWVLATLFSVPWLVFPEAAVWWYDLVICLD 184
Query: 777 EASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECR--ARRRQRSAKLN---HV 941
R ++ G L F L++L C L C+ R + R A V
Sbjct: 185 FWDSEELPLRMLEILGGFLPF-----LLLLVCHVLTQATACKTCCRHQPRPAACQGFARV 239
Query: 942 VLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYV-------TDLCICINSSAKPVVYFL 1100
++S ++V + + L+ F + +P Y+ +D I +NS P + L
Sbjct: 240 AKTILSTYVVLRLPYHVAQLLYLAF-LWDIYPGYLLWEALVYSDYLILLNSCLSPFLCLL 298
Query: 1101 AGRD 1112
A D
Sbjct: 299 ASAD 302
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,851,021
Number of extensions: 1280143
Number of successful extensions: 5573
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 5525
Number of HSP's successfully gapped: 13
Length of query: 394
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 289
Effective length of database: 15,374,224
Effective search space: 4443150736
Effective search space used: 4443150736
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008486
(1184 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003122471.1| PREDICTED: mas-related G-protein coupled rec... 629 0.0
Alignment gi|XP_003121162.1| PREDICTED: proto-oncogene Mas-like [Sus scro... 158 5e-39
Alignment gi|XP_003122975.1| PREDICTED: mas-related G-protein coupled rec... 135 6e-32
Alignment gi|XP_003122492.1| PREDICTED: mas-related G-protein coupled rec... 121 9e-28
Alignment gi|XP_003353779.1| PREDICTED: LOW QUALITY PROTEIN: mas-related ... 97 2e-20
Alignment gi|XP_003122717.1| PREDICTED: putative G-protein coupled recept... 76 4e-14
Alignment gi|XP_003356006.1| PREDICTED: c5a anaphylatoxin chemotactic rec... 59 5e-09
Alignment gi|XP_003362163.1| PREDICTED: c3a anaphylatoxin chemotactic rec... 55 8e-08
Alignment gi|XP_003135065.2| PREDICTED: hypothetical protein LOC100511730... 55 1e-07
Alignment gi|NP_001116572.1| chemokine-like receptor 1 [Sus scrofa]. 54 2e-07
>ref|XP_003122471.1| PREDICTED: mas-related G-protein coupled receptor member F-like [Sus
scrofa].
Length = 345
Score = 629 bits (1622), Expect = 0.0
Identities = 307/323 (95%), Positives = 308/323 (95%)
Frame = +3
Query: 216 MAGNCSWDAHPTNRNKMCPGVSEAPELYSRGFLTIEQITMLPPPAVMNYIFXXXXXXXXX 395
MAGNCSWDAHPTNRNKMCPGVSEAPELYSRGFLTIEQITMLPPPAVMNYIF
Sbjct: 1 MAGNCSWDAHPTNRNKMCPGVSEAPELYSRGFLTIEQITMLPPPAVMNYIFLLLCLCGLV 60
Query: 396 XXXXXXWFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCR 575
WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCR
Sbjct: 61 GNGLVLWFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCR 120
Query: 576 ILGLCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNY 755
ILGLCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNY
Sbjct: 121 ILGLCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNY 180
Query: 756 FCVFLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLN 935
FCVFLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLN
Sbjct: 181 FCVFLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLN 240
Query: 936 HVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK 1115
HVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK
Sbjct: 241 HVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK 300
Query: 1116 SQRLWEPLKVVFQRALRDGAELG 1184
SQRLWEPL+VVFQRALRDGAELG
Sbjct: 301 SQRLWEPLRVVFQRALRDGAELG 323
>ref|XP_003121162.1| PREDICTED: proto-oncogene Mas-like [Sus scrofa].
Length = 325
Score = 158 bits (400), Expect = 5e-39
Identities = 95/253 (37%), Positives = 144/253 (56%), Gaps = 1/253 (0%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGF-LSTFADYVRAVCRILGLC 590
WF F ++R+PF++Y HL+ AD+ LF + SV + LS+ Y + L
Sbjct: 55 WFLCFRMRRNPFTVYITHLSIADISLLFCIFILSVDYALDYELSSGYYYTIVTLSVTFLF 114
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
+ TG+ LL AIS+ERCLSVL+P WY RPK SA+VC+LLWALS LVT++ C+
Sbjct: 115 GYNTGLYLLTAISVERCLSVLYPIWYRCHRPKHQSALVCALLWALSCLVTTMEYVMCIDR 174
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
+A S + CR + F+G+L F VF PLMV+ L++++ + S+KL V+
Sbjct: 175 EGQAH-SRSDCRAVIIFIGVLSFAVFTPLMVVSSSILVVKIR-KTAWASPSSKLYLVITV 232
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQRLW 1130
+ VF + ++ + + + L++ + +V+ L INSSA P +YF G + +R
Sbjct: 233 SIIVFFIFAVPMRLLYLLYYEYWSTFRNLHHVSLLFSTINSSANPFIYFFVGSSRKKRFK 292
Query: 1131 EPLKVVFQRALRD 1169
E LKVV RA +D
Sbjct: 293 ESLKVVLTRAFKD 305
>ref|XP_003122975.1| PREDICTED: mas-related G-protein coupled receptor member X1-like [Sus
scrofa].
Length = 357
Score = 135 bits (339), Expect = 6e-32
Identities = 97/263 (36%), Positives = 142/263 (53%), Gaps = 11/263 (4%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTG-GFLSTFADYVRAVCRILGLC 590
W GF ++R+ FS+Y L+LA+AD L ++S+ N F S+ + R +L
Sbjct: 77 WLLGFRLRRNSFSVYILNLAAADFLLLLLHILYSLQNLIISFHSSAFSFPRFFTTVLTFA 136
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
++ G+SLL AIS ERCLSVL P WY RRP+ LSAV+C+LLWALSLL++ + C FL
Sbjct: 137 -YLAGLSLLSAISTERCLSVLCPIWYRCRRPRHLSAVMCALLWALSLLLSILEAKDCGFL 195
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
S + CR D L +F L+ LAL+ ++ +++R Q + +L V
Sbjct: 196 --SMSFNLIWCRLFDFITAGWLTFLFV-LLAGSSLALLGRILSKSQRLQLT-RLYVTVAL 251
Query: 951 MVSVFLVSSIYLGIDWF-LFWV----FQIPAPFPEYVTDLCICINSSAKPVVYFLAG--- 1106
V VFL+ + G+ WF + W+ F F V C+NS A P++YFL G
Sbjct: 252 TVLVFLICGLPFGVYWFIIIWIHNDLFMYSCHF--LVATTLSCVNSCANPIIYFLVGSFR 309
Query: 1107 --RDKSQRLWEPLKVVFQRALRD 1169
+ +R + L+VV Q+AL D
Sbjct: 310 RRQRPKRRRRQTLRVVLQKALED 332
>ref|XP_003122492.1| PREDICTED: mas-related G-protein coupled receptor member D-like [Sus
scrofa].
Length = 531
Score = 121 bits (303), Expect = 9e-28
Identities = 89/256 (34%), Positives = 125/256 (48%), Gaps = 4/256 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W GF +R IY LHLA AD+ +L +VLN+ S A V R
Sbjct: 264 WLLGFRRQRGTVGIYLLHLAVADLLFLLCSVALTVLNSR---SPGAQLVHLAVRGAKYLA 320
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
+V G+SLL A S + CLS LFP W R LS +VC++LW L+LL+T + F G
Sbjct: 321 YVAGLSLLTAASTQPCLSSLFPTWCRVRWRPHLSTLVCAVLWLLALLLTMLALCFHDEAG 380
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRA-RRRQRSAKLNHVVLA 950
G+ +D ++ F P M L +AL + V + +R +L +LA
Sbjct: 381 RPYLRPGS---PVDIIFPVVPLAGFTPSMALSSMALCVHVRRSSWPPPRRPPQLYVAILA 437
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIP---APFPEYVTDLCICINSSAKPVVYFLAGRDKSQ 1121
V V L+ ++ LGI FL + P E+VT L + ++SSAKP +YFL G
Sbjct: 438 SVLVCLICTLPLGISGFLLYWLDPPQHRETLFEHVTHLSLSVSSSAKPGIYFLLGSRGHP 497
Query: 1122 RLWEPLKVVFQRALRD 1169
LW PL V +AL++
Sbjct: 498 SLWGPLGAVLSQALQE 513
>ref|XP_003353779.1| PREDICTED: LOW QUALITY PROTEIN: mas-related G-protein coupled
receptor member G-like [Sus scrofa].
Length = 313
Score = 97.1 bits (240), Expect = 2e-20
Identities = 82/262 (31%), Positives = 115/262 (43%), Gaps = 5/262 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W GF I++ PFS+Y LH+A AD +L + FS + L + AV +
Sbjct: 32 WHLGFRIEKGPFSLYVLHVALADFLFLGCQLGFSAVQAA--LGSEDSLYFAVTFV---AF 86
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
G+ LL A S E CLS LFP Y RRP+ SAVVC L+ AL+ + C L
Sbjct: 87 SGGGLGLLAAFSTECCLSDLFPTCYEGRRPRHTSAVVCGLIXALTPPAMLLXAKACGLL- 145
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLAM 953
AS C + L + C V + + C R+R R +
Sbjct: 146 -RASAHLLTCLRSHSASVTWLLSLACVAXVAGLVLFVWVACCSQRQRPR-------FCGI 197
Query: 954 VSVFLVSSIYLGIDWFLFWVF-----QIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKS 1118
V + + G+ + L W Q+ F T L C++ SAKP++YF G
Sbjct: 198 VPGSELLLFFCGLPYVLCWTLRPILSQLLPLFLPLATLLLACVHCSAKPLIYFTXGCQPG 257
Query: 1119 QRLWEPLKVVFQRALRDGAELG 1184
+R EPL+ V QR L +GA+ G
Sbjct: 258 KR--EPLRAVLQRTLGEGAQPG 277
>ref|XP_003122717.1| PREDICTED: putative G-protein coupled receptor 44-like [Sus scrofa].
Length = 405
Score = 75.9 bits (185), Expect = 4e-14
Identities = 79/286 (27%), Positives = 122/286 (42%), Gaps = 32/286 (11%)
Frame = +3
Query: 423 GFSIKRSPFSIYFLHLASADVGYLFSKAVFSV-LNTGGFLSTFADYVRAVCRILGLCMFV 599
G ++++ + + LHLA +D+ S F+ L G + + I L MF
Sbjct: 58 GCRMRQTVVTTWVLHLALSDLLATASLPFFTYFLAVGHSWELGTTFCKLHSSIFFLNMFA 117
Query: 600 TGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVT------------- 740
+G LL AISL+RCL V+ P W R + VC +LWAL++L T
Sbjct: 118 SGF-LLSAISLDRCLQVVRPVWAQNHRTVAAAHKVCLVLWALAVLNTVPYFVFRDTIKRL 176
Query: 741 --SIHNYFCVFLGHEASGSGAGCRHMDTFLGILLFLV--FCPLMVLPCLALILQVECRAR 908
I Y+ V L + A C L + FL+ PL ++ + + + R R
Sbjct: 177 DGRIMCYYNVLLLNPGPDLDATCNSRQMALAVSKFLLAFAVPLAIIASSHVAVSAQLRQR 236
Query: 909 RRQRSAKLNHVVLAMVSVFLVSSIYLGIDWFLFWVFQI--------PAPFP------EYV 1046
R+RS + +V A+V+ F + W + VF + P P +V
Sbjct: 237 GRRRSGRFVRLVAAVVAAF-------ALCWGPYHVFSVLEARSHSNPELRPLVWRGLPFV 289
Query: 1047 TDLCICINSSAKPVVYFLAGRDKSQRLWEPLKVVFQRALRDGAELG 1184
T L INS P++Y L D ++L L+ V + L D +ELG
Sbjct: 290 TSLAF-INSVVNPLLYVLTCPDVLRKLRRSLRSVLESVLVDDSELG 334
>ref|XP_003356006.1| PREDICTED: c5a anaphylatoxin chemotactic receptor [Sus scrofa].
Length = 351
Score = 58.9 bits (141), Expect = 5e-09
Identities = 68/276 (24%), Positives = 109/276 (39%), Gaps = 24/276 (8%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILG--- 584
W G KR+ +I+FL+LA AD L S +L + A CRIL
Sbjct: 60 WVTGSEAKRTINAIWFLNLAVAD---LLSCLALPILFASILQHNHWSFGDAACRILPSLI 116
Query: 585 LCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLV--------T 740
L + LL IS +R L V P W R L+ + C + W L+LL+ T
Sbjct: 117 LLNMYASILLLATISADRFLLVFNPVWCQNFRRAHLAWMACGMAWGLALLLTIPSFLFRT 176
Query: 741 SIHNYF-----CVFLGHEASGSGAGCRHMDTFLGILLFLV--FCPLMVLPCLALILQVEC 899
+ YF CV G +++ + ++ +V PL+ L L +
Sbjct: 177 ARQEYFPPKTMCVV------DYGRDGFYIERVVALIRLIVGFLGPLVTLSICYTFLLIRT 230
Query: 900 RARRRQRSAKLNHVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTD---LCICI- 1067
+R RS K VV A+V F + + + + F ++V+ LC+ I
Sbjct: 231 WSRSATRSTKTLEVVAAVVGSFFIFWLPYQVTGVMLAFFHRQLDIFKFVSSLDALCVSIA 290
Query: 1068 --NSSAKPVVYFLAGRDKSQRLWEPLKVVFQRALRD 1169
N P++Y +A + R + L ++ L +
Sbjct: 291 YVNCCINPIIYMVAAQGFHARFLKTLPSRLRKVLTE 326
>ref|XP_003362163.1| PREDICTED: c3a anaphylatoxin chemotactic receptor-like [Sus
scrofa].
Length = 476
Score = 55.1 bits (131), Expect = 8e-08
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILG--- 584
W G ++R+ +++FLHL AD S FS+++ L Y +C+++
Sbjct: 46 WVAGLKMQRTVNTVWFLHLTMADFLCCLSLP-FSLVHLA--LQGHWPYGWFLCKLIPSII 102
Query: 585 -LCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLV 737
L MF + V LL AISL+RCL VL P W + R R + ++C +WA++ ++
Sbjct: 103 ILNMFAS-VFLLTAISLDRCLLVLKPIWCQKHRSVRTALMICGCIWAMAFVM 153
>ref|XP_003135065.2| PREDICTED: hypothetical protein LOC100511730 [Sus scrofa].
Length = 1224
Score = 54.7 bits (130), Expect = 1e-07
Identities = 59/240 (24%), Positives = 91/240 (37%), Gaps = 7/240 (2%)
Frame = -1
Query: 1103 GQEVDDRLGAAVDADTQVGDILGEGGRDLXXXXXXXXXXXXDGGHEENGDHGQDDV--VE 930
G+E D G + + + GD G+ G GG EE GQ++ E
Sbjct: 895 GEEEGDGEGQEGEGEEEQGDGEGQEGE---------------GGEEEGDGEGQEEEGGEE 939
Query: 929 LGGALASPGPAFHLQDERQAGQHHERAEDQEKQDAQEGVHVPAARPGSGCLVAQEHAEVV 750
G G + + + GQ E E++E + QEG +E E
Sbjct: 940 QGDGEGQEGEGGEEEGDGE-GQEGEGGEEEENGEGQEGEG------------EEEEEEGE 986
Query: 749 VDAGDQERQGPEQGAHHGGQALGPAAPVPVGEEDRQAALQADGWQEAHAGDKHAEPQDPA 570
D G + + E+G G + GEE+ +G E GD E ++
Sbjct: 987 RDEGQEGEEEEEEGDGEGQEE--------EGEEEEGGEEGQEGEGEEEEGDGGGEEEEEQ 1038
Query: 569 HGADVVGKGAQEAAGVEDGEHGLAKEVAD-----VGAGQVQEVDGEGAPLDGEAEEPEDQ 405
G + +G +E G E+ E G +E + G G+ E +GEG +GE EE E +
Sbjct: 1039 EGEE---EGGEEEGGQEEEEEGGEEEEGEGEEEEQGGGEEGEGEGEGEEEEGEGEEEEGE 1095
Score = 53.9 bits (128), Expect = 2e-07
Identities = 69/290 (23%), Positives = 106/290 (36%), Gaps = 17/290 (5%)
Frame = -1
Query: 1103 GQEVDDRLGAAVDADTQVGDILGEGGRDLXXXXXXXXXXXXDGGHEENGDHGQDDVVEL- 927
G+E D G + + + GD G+ G +GG EE GQ+ E
Sbjct: 811 GEEEGDGEGQEGEGEEEEGDGEGQEGEG-EEEEGDGERQEGEGGEEEGDGEGQEGEEEEE 869
Query: 926 ---GGALASPGPAFHLQDERQAGQHHERAEDQEKQDAQEGVHVPAARPGSGCLVAQEHAE 756
G G ++ER GQ E D E Q+ EG G +E +
Sbjct: 870 EGDGEGQEGEGEGEEEEEERDEGQEGEEEGDGEGQEG-EGEEEQGDGEGQEGEGGEEEGD 928
Query: 755 VVVDAGDQERQGPEQGAHHGGQALGPAAPVPVGEEDRQAALQADG-WQEAHAGDKHAEPQ 579
G +E G EQG G + G GEE+ DG QE G E +
Sbjct: 929 ---GEGQEEEGGEEQGDGEGQEGEG-------GEEE------GDGEGQEGEGG----EEE 968
Query: 578 DPAHGADVVGKGAQEAAGVEDGEHGLAKEVADVGAGQV------------QEVDGEGAPL 435
+ G + G+ +E ++G+ G +E G GQ QE +GE
Sbjct: 969 ENGEGQEGEGEEEEEEGERDEGQEGEEEEEEGDGEGQEEEGEEEEGGEEGQEGEGEEEEG 1028
Query: 434 DGEAEEPEDQPVAHQAAQTQKQEDVVHDGRRRQHGDLLDGQEAAAVELRG 285
DG EE E+Q + + + ++ +G + G+ + ++ E G
Sbjct: 1029 DGGGEEEEEQEGEEEGGEEEGGQEEEEEGGEEEEGEGEEEEQGGGEEGEG 1078
Score = 48.1 bits (113), Expect = 9e-06
Identities = 64/253 (25%), Positives = 101/253 (39%), Gaps = 23/253 (9%)
Frame = -1
Query: 974 GHEENGDHGQDDVVELG-GALASPGPAFHLQDERQAGQHHER-------AEDQEKQDAQE 819
G EE G G+++ LG G Q ER+ G+ ER E+++ +D +E
Sbjct: 670 GEEEKGK-GEEETERLGSGEKDLEEEKEREQKEREQGRQKERNKGMKEGEEEEQGRDRRE 728
Query: 818 GVHVPAARPGSGCLVAQE-------HAEVVVDAGDQERQGPEQGAHHGGQAL--GPAAPV 666
G G +E E V + ++E +G E+ H GQ G
Sbjct: 729 EEEGGEEEEGEGEEEEEEGEEEQEGEGEEVEEGEEREGEGGEEEGHGEGQEGEGGEEEGD 788
Query: 665 PVGEEDRQAALQADG-WQEAHAGDKHAEPQ-DPAHGADVVGKG-AQEAAGVE---DGEHG 504
G+E + + DG QE G++ + + G + G G QE G E DGE
Sbjct: 789 GEGQEGEEGEEEGDGEGQEGEGGEEEGDGEGQEGEGEEEEGDGEGQEGEGEEEEGDGERQ 848
Query: 503 LAKEVADVGAGQVQEVDGEGAPLDGEAEEPEDQPVAHQAAQTQKQEDVVHDGRRRQHGDL 324
+ + G G+ QE + E DGE +E E + + +++ D +G G
Sbjct: 849 EGEGGEEEGDGEGQEGEEEEEEGDGEGQEGEG-----EGEEEEEERDEGQEGEEEGDG-- 901
Query: 323 LDGQEAAAVELRG 285
+GQE E +G
Sbjct: 902 -EGQEGEGEEEQG 913
>ref|NP_001116572.1| chemokine-like receptor 1 [Sus scrofa].
Length = 363
Score = 53.9 bits (128), Expect = 2e-07
Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 46/275 (16%)
Frame = +3
Query: 426 FSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTG-GFLSTFADYVRAVCRILGLCMF-- 596
F +K++ +++FL+LA AD +LF+ VF ++ + + A+C+I +
Sbjct: 63 FKMKKTVNTVWFLNLAVAD--FLFN--VFLPIHIAYAAMDYHWVFGTAMCKISNFLLIHN 118
Query: 597 -VTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTS---------- 743
T V LL IS +RC+SVL P W R RL+ + C ++W L+ ++S
Sbjct: 119 MYTSVFLLTVISFDRCISVLLPVWSQNHRSIRLAYMACVVIWVLAFFLSSPSLVFRDTAH 178
Query: 744 IHNYFCVF----LGHEASGSGAGCRHMDT-------FLGILLFL--VFCPLMVLPCLALI 884
+H F L +S S MDT + I FL P++++
Sbjct: 179 LHGKISCFNNFSLSATSSSSWPTHPQMDTVGFGRQMVVTITRFLCGFLVPVLIISACYFT 238
Query: 885 LQVECRARRRQRSAKLNHVVLAMVSVFLVSSIYLGIDWFLFW------------------ 1010
+ + R R ++ K +++ ++ I +FL W
Sbjct: 239 IVYKLRRNRLAKTKKPFKIIVTII-----------ITFFLCWCPYHTLYLLELHHRAMPG 287
Query: 1011 -VFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRD 1112
VF + P T + I NS P++Y G+D
Sbjct: 288 SVFSLGVPL---ATAIAIA-NSCMNPILYVFMGQD 318
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,833,463
Number of extensions: 806926
Number of successful extensions: 3735
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 3638
Number of HSP's successfully gapped: 14
Length of query: 394
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 293
Effective length of database: 8,829,335
Effective search space: 2586995155
Effective search space used: 2586995155
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008486
(1184 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_663354.1| mas-related G-protein coupled receptor member F... 530 e-151
Alignment gi|NP_032578.2| proto-oncogene Mas [Mus musculus]. 165 7e-41
Alignment gi|NP_109651.1| mas-related G-protein coupled receptor member H... 154 1e-37
Alignment gi|NP_987075.1| mas-related G-protein coupled receptor member D... 152 6e-37
Alignment gi|NP_694707.2| mas-related G-protein coupled receptor member A... 147 2e-35
Alignment gi|NP_694735.2| mas-related G-protein coupled receptor member A... 141 1e-33
Alignment gi|NP_997423.1| mas-related G-protein coupled receptor member X... 139 3e-33
Alignment gi|NP_001171037.1| predicted gene, EG668725 [Mus musculus]. 139 6e-33
Alignment gi|NP_780743.1| mas-related G-protein coupled receptor member E... 133 2e-31
Alignment gi|NP_991379.3| mas-related G-protein coupled receptor member B... 132 5e-31
>ref|NP_663354.1| mas-related G-protein coupled receptor member F [Mus musculus].
Length = 343
Score = 530 bits (1365), Expect = e-151
Identities = 259/323 (80%), Positives = 279/323 (86%)
Frame = +3
Query: 216 MAGNCSWDAHPTNRNKMCPGVSEAPELYSRGFLTIEQITMLPPPAVMNYIFXXXXXXXXX 395
MAGNCSW+AH TN+NKMCPG+SEA ELYSRGFLTIEQI LPPPAV NYIF
Sbjct: 1 MAGNCSWEAHSTNQNKMCPGMSEARELYSRGFLTIEQIATLPPPAVTNYIFLLLCLCGLV 60
Query: 396 XXXXXXWFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCR 575
WFFGFSIKR+PFSIYFLHLASAD YLFSKAV ++LN G FL +F DY+R V R
Sbjct: 61 GNGLVLWFFGFSIKRTPFSIYFLHLASADGMYLFSKAVIALLNMGTFLGSFPDYIRRVSR 120
Query: 576 ILGLCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNY 755
I+GLC F TGVSLLPAIS+ERC+SV+FP WYWRRRPKRLSA VC+LLW LS LVTSIHNY
Sbjct: 121 IVGLCTFFTGVSLLPAISIERCVSVIFPTWYWRRRPKRLSAGVCALLWMLSFLVTSIHNY 180
Query: 756 FCVFLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLN 935
FC+FLGHEA G+ CR+MD LGILLF +FCPLMVLPCLALIL VECRARRRQRSAKLN
Sbjct: 181 FCMFLGHEAPGT--VCRNMDIALGILLFFLFCPLMVLPCLALILHVECRARRRQRSAKLN 238
Query: 936 HVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK 1115
HVVLA+VSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKP+VYFLAGRDK
Sbjct: 239 HVVLAIVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPIVYFLAGRDK 298
Query: 1116 SQRLWEPLKVVFQRALRDGAELG 1184
SQRLWEPL+VVFQRALRDGAE G
Sbjct: 299 SQRLWEPLRVVFQRALRDGAEPG 321
>ref|NP_032578.2| proto-oncogene Mas [Mus musculus].
Length = 324
Score = 165 bits (417), Expect = 7e-41
Identities = 98/278 (35%), Positives = 152/278 (54%), Gaps = 1/278 (0%)
Frame = +3
Query: 339 PPPAVMNYIFXXXXXXXXXXXXXXXWFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSV 518
PP +++++ WF F ++R+PF++Y HL+ AD+ LF + S+
Sbjct: 29 PPIPIVHWVIMSISPLGFVENGILLWFLCFRMRRNPFTVYITHLSIADISLLFCIFILSI 88
Query: 519 LNTGGF-LSTFADYVRAVCRILGLCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLS 695
+ LS+ Y + L + TG+ LL AIS+ERCLSVL+P WY RPK S
Sbjct: 89 DYALDYELSSGHHYTIVTLSVTFLFGYNTGLYLLTAISVERCLSVLYPIWYRCHRPKHQS 148
Query: 696 AVVCSLLWALSLLVTSIHNYFCVFLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCL 875
A VC+LLWALS LVT++ C+ G E S S + CR + F+ IL FLVF PLM++
Sbjct: 149 AFVCALLWALSCLVTTMEYVMCIDSGEE-SHSRSDCRAVIIFIAILSFLVFTPLMLVSST 207
Query: 876 ALILQVECRARRRQRSAKLNHVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDL 1055
L++++ + S+KL V++ + +FL+ ++ + + + L++ + ++ L
Sbjct: 208 ILVVKIR-KNTWASHSSKLYIVIMVTIIIFLIFAMPMRVLYLLYYEYWSAFGNLHNISLL 266
Query: 1056 CICINSSAKPVVYFLAGRDKSQRLWEPLKVVFQRALRD 1169
INSSA P +YF G K +R E LKVV RA +D
Sbjct: 267 FSTINSSANPFIYFFVGSSKKKRFRESLKVVLTRAFKD 304
>ref|NP_109651.1| mas-related G-protein coupled receptor member H [Mus musculus].
Length = 321
Score = 154 bits (390), Expect = 1e-37
Identities = 97/258 (37%), Positives = 139/258 (53%), Gaps = 6/258 (2%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
WF F IKR PF+IY LHLA AD L ++ ++NT + + + I G
Sbjct: 57 WFLIFCIKRKPFTIYILHLAIADFMVLLCSSIMKLVNTFHIYNMTLESYAILFMIFG--- 113
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
+ TG+ LL AIS+ERCLSVL+P WY +RPK SAV C LLWALS+LV+ + N+FC+
Sbjct: 114 YNTGLHLLTAISVERCLSVLYPIWYQCQRPKHQSAVACMLLWALSVLVSGLENFFCIL-- 171
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLAM 953
E CR++ F IL FLVF PLM+ L L +QV C + RQ KL +++
Sbjct: 172 -EVKPQFPECRYVYIFSCILTFLVFVPLMIFSNLILFIQVCCNLKPRQ-PTKLYVIIMTT 229
Query: 954 VSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTD------LCICINSSAKPVVYFLAGRDK 1115
V +FLV ++ + + L + + + V D + IN S P+VYF+ G +
Sbjct: 230 VILFLVFAMPMKV---LLIIGYYSSSLDDSVWDSLPYLNMLSTINCSINPIVYFVVGSLR 286
Query: 1116 SQRLWEPLKVVFQRALRD 1169
+R + LK Q+ +
Sbjct: 287 RKRSRKSLKEALQKVFEE 304
>ref|NP_987075.1| mas-related G-protein coupled receptor member D [Mus musculus].
Length = 321
Score = 152 bits (383), Expect = 6e-37
Identities = 97/254 (38%), Positives = 136/254 (53%), Gaps = 5/254 (1%)
Frame = +3
Query: 432 IKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLST-FADYVRAVCRILGLCMFVTGV 608
++RSPF +Y L+LA AD +LF A L TG L + + R + + G+
Sbjct: 56 MQRSPFCVYVLNLAVADFLFLFCMASMLSLETGPLLIVNISAKIYEGMRRIKYFAYTAGL 115
Query: 609 SLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLGHEASG 788
SLL AIS +RCLSVLFP WY RP+ LS+VV LWAL+ L+ + ++FCV H
Sbjct: 116 SLLTAISTQRCLSVLFPIWYKCHRPRHLSSVVSGALWALAFLMNFLASFFCVQFWHPNKH 175
Query: 789 SGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRA-RRRQRSAKLNHVVLAMVSVF 965
C +D L+ +F P+M+L L ++V + +R+R +L V+L + VF
Sbjct: 176 Q---CFKVDIVFNSLILGIFMPVMILTSTILFIRVRKNSLMQRRRPRRLYVVILTSILVF 232
Query: 966 LVSSIYLGIDWFLFWVFQIPAP---FPEYVTDLCICINSSAKPVVYFLAGRDKSQRLWEP 1136
L S+ LGI+WFL + + V+ ++SSA PV+YFL G KS RL E
Sbjct: 233 LTCSLPLGINWFLLYWVDVKRDVRLLYSCVSRFSSSLSSSANPVIYFLVGSQKSHRLQES 292
Query: 1137 LKVVFQRALRDGAE 1178
L V RALRD E
Sbjct: 293 LGAVLGRALRDEPE 306
>ref|NP_694707.2| mas-related G-protein coupled receptor member A3 [Mus musculus].
Length = 329
Score = 147 bits (370), Expect = 2e-35
Identities = 94/261 (36%), Positives = 142/261 (54%), Gaps = 6/261 (2%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFL---STFADYVRAVCRILG 584
W GF + R+ F +Y L+LA AD +L + S ++ F FA + R+L
Sbjct: 63 WLLGFRMHRTAFLVYILNLALADFLFLLCHIINSTVDLLKFTLPKGIFAFCFHTIKRVL- 121
Query: 585 LCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCV 764
++TG+S+L AIS ERCLSVL P WY RRP+ S V+C+++W LSLL+ + YFC
Sbjct: 122 ---YITGLSMLSAISTERCLSVLCPIWYHCRRPEHTSTVMCAVIWVLSLLICILDGYFCG 178
Query: 765 FLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVV 944
+L + C+ D F+G L +F ++ L LAL+ ++ C A R + +L +
Sbjct: 179 YLDNHYFNYSV-CQAWDIFIGAYLMFLFV-VLCLSTLALLARLFCGA-RNMKFTRLFVTI 235
Query: 945 LAMVSVFLVSSIYLGIDWF-LFWVFQIPAPFPEYVTDLCI--CINSSAKPVVYFLAGRDK 1115
+ V VFL+ + GI WF LFW+ P F + L + INS A P++YF G +
Sbjct: 236 MLTVLVFLLCGLPWGITWFLLFWI--APGVFVLDYSPLLVLTAINSCANPIIYFFVGSFR 293
Query: 1116 SQRLWEPLKVVFQRALRDGAE 1178
+ + LK+V Q+AL+D E
Sbjct: 294 QRLNKQTLKMVLQKALQDTPE 314
>ref|NP_694735.2| mas-related G-protein coupled receptor member A1 [Mus musculus].
Length = 331
Score = 141 bits (355), Expect = 1e-33
Identities = 90/264 (34%), Positives = 141/264 (53%), Gaps = 9/264 (3%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVC-RILGLC 590
W GF + R+ FS+Y L+LA AD +L + S+L L+ F +C + +
Sbjct: 63 WLLGFCLHRNAFSVYILNLALADFFFLLGHIIDSILL---LLNVFYPITFLLCFYTIMMV 119
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
+++ G+S+L AIS ERCLSVL P WY RP+ S V+C+++W LSLL+ +++YFC FL
Sbjct: 120 LYIAGLSMLSAISTERCLSVLCPIWYHCHRPEHTSTVMCAVIWVLSLLICILNSYFCGFL 179
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
+ GC + F L +F ++ L LAL+ ++ C + + +L ++
Sbjct: 180 NTQYKNEN-GCLALSFFTAAYLMFLFV-VLCLSSLALVARLFC-GTGQIKLTRLYVTIIL 236
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDL--------CICINSSAKPVVYFLAG 1106
+ VFL+ + GI WFL +F+I F +V DL INS A P++YF G
Sbjct: 237 SILVFLLCGLPFGIHWFL--LFKIKDDF--HVFDLGFYLASVVLTAINSCANPIIYFFVG 292
Query: 1107 RDKSQRLWEPLKVVFQRALRDGAE 1178
+ + + LK+V Q AL+D E
Sbjct: 293 SFRHRLKHQTLKMVLQNALQDTPE 316
>ref|NP_997423.1| mas-related G-protein coupled receptor member X1 [Mus musculus].
Length = 322
Score = 139 bits (351), Expect = 3e-33
Identities = 90/260 (34%), Positives = 139/260 (53%), Gaps = 5/260 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYV-RAVCRILGLC 590
W GF ++R S+Y L+LA AD +L + S+L F +A + + + +
Sbjct: 49 WLLGFRMRRKAISVYILNLALADSFFLCCHFIDSLLRIIDFYGLYAHKLSKDILGNAAII 108
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
+++G+S+L AIS ERCL VL+P WY RP+ +SA++C+L+W LS L+ I ++F FL
Sbjct: 109 PYISGLSILSAISTERCLCVLWPIWYHCHRPRNMSAIICALIWVLSFLM-GILDWFSGFL 167
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
G + T I LF+ L+ LAL+L++ C RR+ S +L +
Sbjct: 168 GETHHHLWKNVDFIITAFLIFLFM----LLSGSSLALLLRILCGPRRKPLS-RLYVTIAL 222
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFP----EYVTDLCICINSSAKPVVYFLAGRDKS 1118
V V+L+ + LG+ FL + F + +P VT + C+NSSA P++YFL G +
Sbjct: 223 TVMVYLICGLPLGLYLFLLYWFGVHLHYPFCHIYQVTAVLSCVNSSANPIIYFLVGSFRQ 282
Query: 1119 QRLWEPLKVVFQRALRDGAE 1178
R LK V +RAL D E
Sbjct: 283 HRKHRSLKRVLKRALEDTPE 302
>ref|NP_001171037.1| predicted gene, EG668725 [Mus musculus].
Length = 331
Score = 139 bits (349), Expect = 6e-33
Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 5/260 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRI-LGLC 590
W GF ++R+ FS+Y L+LA AD +L + + S F S ++ +C +
Sbjct: 62 WLLGFHLRRNAFSVYILNLALADFLFLLCRIIASTQKLLTFSSPNITFL--ICLYTFRVI 119
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
+++ G+S+L AIS+ERCLSVL P WY RP+ S V+C+ +W LSLL+ ++ YFC FL
Sbjct: 120 LYIAGLSMLTAISIERCLSVLCPIWYRCHRPEHTSTVMCAAIWVLSLLICILNRYFCGFL 179
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
+ + GC + F L +F L V LAL+ ++ C R + +L ++
Sbjct: 180 DTKYV-NDYGCMASNFFNAAYLMFLFVVLCV-SSLALLARLFC-GTGRMKLTRLYVTIML 236
Query: 951 MVSVFLVSSIYLGIDWF-LFWVFQIPAPFP---EYVTDLCICINSSAKPVVYFLAGRDKS 1118
+ VFL+ + G+ WF LFW+ A F + + INSSA P++YF G +
Sbjct: 237 TILVFLLCGLPCGLYWFLLFWIKNGFAVFDFNFYLASTVLSAINSSANPIIYFFVGSFRH 296
Query: 1119 QRLWEPLKVVFQRALRDGAE 1178
+ + LK+V Q AL+D E
Sbjct: 297 RLKHQTLKMVLQSALQDTPE 316
>ref|NP_780743.1| mas-related G-protein coupled receptor member E [Mus musculus].
Length = 310
Score = 133 bits (335), Expect = 2e-31
Identities = 92/263 (34%), Positives = 132/263 (50%), Gaps = 6/263 (2%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W ++ R+PFSIY L +A AD+ +L V + F ++V +L
Sbjct: 43 WLLNQNVYRNPFSIYLLDVACADLIFLCCHMVAIIPELLQDQLNFPEFVHISLTMLRFFC 102
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
++ G+SLL AIS E+CL+ LFP WY RRP+ L+ VC+L+W L LL+ + + C
Sbjct: 103 YIVGLSLLAAISTEQCLATLFPAWYLCRRPRYLTTCVCALIWVLCLLLDLLLSGAC---- 158
Query: 774 HEASGSGAGCRHMDTFLGI---LLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVV 944
GA H+ L + +L C M + L L+L+VE R R + +V
Sbjct: 159 --TQFFGAPSYHLCDMLWLVVAVLLAALCCTMCVTSLLLLLRVE-RGPERHQPRGFPTLV 215
Query: 945 LAMVSVFLVSSIYLGIDWF---LFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK 1115
L V +FL + GI W L W IP F + + ++S+AKP +YF G
Sbjct: 216 LLAVLLFLFCGLPFGIFWLSKNLSW--HIPLYFYHF-SFFMASVHSAAKPAIYFFLGSTP 272
Query: 1116 SQRLWEPLKVVFQRALRDGAELG 1184
QR EPL++V QRAL D AELG
Sbjct: 273 GQRFREPLRLVLQRALGDEAELG 295
>ref|NP_991379.3| mas-related G-protein coupled receptor member B1 [Mus musculus].
Length = 350
Score = 132 bits (332), Expect = 5e-31
Identities = 91/263 (34%), Positives = 145/263 (55%), Gaps = 8/263 (3%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAV--FSVLNTGGFLSTFADYVRAVCRILGL 587
WF GF + R+ FS+Y L+LA AD ++ + V F ++ F+ T ++ + +L +
Sbjct: 65 WFLGFQMSRNAFSVYILNLAGADFVFMCFQIVHCFYIILDIYFIPT--NFFSSYTMVLNI 122
Query: 588 CMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVF 767
+++G+S+L IS ER LSV++P WY +RP+ SAV+C++LW LSL+++ + C F
Sbjct: 123 A-YLSGLSILTVISTERFLSVMWPIWYRCQRPRHTSAVICTVLWVLSLVLSLLEGKECGF 181
Query: 768 LGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVL 947
L + SG G C+ D L ++F L+ LAL+L + C + +L ++
Sbjct: 182 L-YYTSGPGL-CKTFDLITTAWLIVLFVVLLG-SSLALVLTIFC-GLHKVPVTRLYVTIV 237
Query: 948 AMVSVFLVSSIYLGIDWFLF-WVFQI----PAPFPEYVTDLCICINSSAKPVVYFLAGRD 1112
V VFL+ + GI WFL W+ + P F VT CINS A P++YFL G
Sbjct: 238 FTVLVFLIFGLPYGIYWFLLEWIREFHDNKPCGF-RNVTIFLSCINSCANPIIYFLVGSI 296
Query: 1113 KSQRLW-EPLKVVFQRALRDGAE 1178
+ R + LK++ QRA++D E
Sbjct: 297 RHHRFQRKTLKLLLQRAMQDSPE 319
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,716,449
Number of extensions: 1019456
Number of successful extensions: 4416
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 4305
Number of HSP's successfully gapped: 37
Length of query: 394
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 291
Effective length of database: 12,523,851
Effective search space: 3644440641
Effective search space used: 3644440641
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008486
(1184 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_659452.3| mas-related G-protein coupled receptor member F... 573 e-163
Alignment gi|NP_001091985.1| mas-related G-protein coupled receptor membe... 573 e-163
Alignment gi|NP_002368.1| proto-oncogene Mas [Homo sapiens]. 159 4e-39
Alignment gi|NP_944605.2| mas-related G-protein coupled receptor member D... 153 3e-37
Alignment gi|NP_473371.1| mas-related G-protein coupled receptor member X... 149 5e-36
Alignment gi|NP_671732.3| mas-related G-protein coupled receptor member X... 141 1e-33
Alignment gi|NP_473373.2| mas-related G-protein coupled receptor member X... 134 2e-31
Alignment gi|NP_473372.3| mas-related G-protein coupled receptor member X... 130 2e-30
Alignment gi|NP_001034254.1| mas-related G-protein coupled receptor membe... 128 1e-29
Alignment gi|NP_001157849.1| mas-related G-protein coupled receptor membe... 117 3e-26
>ref|NP_659452.3| mas-related G-protein coupled receptor member F [Homo sapiens].
Length = 343
Score = 573 bits (1477), Expect = e-163
Identities = 275/323 (85%), Positives = 291/323 (90%)
Frame = +3
Query: 216 MAGNCSWDAHPTNRNKMCPGVSEAPELYSRGFLTIEQITMLPPPAVMNYIFXXXXXXXXX 395
MAGNCSW+AHP NRNKMCPG+SEAPELYSRGFLTIEQI MLPPPAVMNYIF
Sbjct: 1 MAGNCSWEAHPGNRNKMCPGLSEAPELYSRGFLTIEQIAMLPPPAVMNYIFLLLCLCGLV 60
Query: 396 XXXXXXWFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCR 575
WFFGFSIKR+PFSIYFLHLASADVGYLFSKAVFS+LNTGGFL TFADY+R+VCR
Sbjct: 61 GNGLVLWFFGFSIKRNPFSIYFLHLASADVGYLFSKAVFSILNTGGFLGTFADYIRSVCR 120
Query: 576 ILGLCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNY 755
+LGLCMF+TGVSLLPA+S ERC SV+FP WYWRRRPKRLSAVVC+LLW LSLLVT +HNY
Sbjct: 121 VLGLCMFLTGVSLLPAVSAERCASVIFPAWYWRRRPKRLSAVVCALLWVLSLLVTCLHNY 180
Query: 756 FCVFLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLN 935
FCVFLG A GA CRHMD FLGILLFL+ CPLMVLPCLALIL VECRARRRQRSAKLN
Sbjct: 181 FCVFLGRGA--PGAACRHMDIFLGILLFLLCCPLMVLPCLALILHVECRARRRQRSAKLN 238
Query: 936 HVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK 1115
HV+LAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKP+VYFLAGRDK
Sbjct: 239 HVILAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPIVYFLAGRDK 298
Query: 1116 SQRLWEPLKVVFQRALRDGAELG 1184
SQRLWEPL+VVFQRALRDGAELG
Sbjct: 299 SQRLWEPLRVVFQRALRDGAELG 321
>ref|NP_001091985.1| mas-related G-protein coupled receptor member F [Homo sapiens].
Length = 343
Score = 573 bits (1477), Expect = e-163
Identities = 275/323 (85%), Positives = 291/323 (90%)
Frame = +3
Query: 216 MAGNCSWDAHPTNRNKMCPGVSEAPELYSRGFLTIEQITMLPPPAVMNYIFXXXXXXXXX 395
MAGNCSW+AHP NRNKMCPG+SEAPELYSRGFLTIEQI MLPPPAVMNYIF
Sbjct: 1 MAGNCSWEAHPGNRNKMCPGLSEAPELYSRGFLTIEQIAMLPPPAVMNYIFLLLCLCGLV 60
Query: 396 XXXXXXWFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCR 575
WFFGFSIKR+PFSIYFLHLASADVGYLFSKAVFS+LNTGGFL TFADY+R+VCR
Sbjct: 61 GNGLVLWFFGFSIKRNPFSIYFLHLASADVGYLFSKAVFSILNTGGFLGTFADYIRSVCR 120
Query: 576 ILGLCMFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNY 755
+LGLCMF+TGVSLLPA+S ERC SV+FP WYWRRRPKRLSAVVC+LLW LSLLVT +HNY
Sbjct: 121 VLGLCMFLTGVSLLPAVSAERCASVIFPAWYWRRRPKRLSAVVCALLWVLSLLVTCLHNY 180
Query: 756 FCVFLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLN 935
FCVFLG A GA CRHMD FLGILLFL+ CPLMVLPCLALIL VECRARRRQRSAKLN
Sbjct: 181 FCVFLGRGA--PGAACRHMDIFLGILLFLLCCPLMVLPCLALILHVECRARRRQRSAKLN 238
Query: 936 HVVLAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDK 1115
HV+LAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKP+VYFLAGRDK
Sbjct: 239 HVILAMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPIVYFLAGRDK 298
Query: 1116 SQRLWEPLKVVFQRALRDGAELG 1184
SQRLWEPL+VVFQRALRDGAELG
Sbjct: 299 SQRLWEPLRVVFQRALRDGAELG 321
>ref|NP_002368.1| proto-oncogene Mas [Homo sapiens].
Length = 325
Score = 159 bits (403), Expect = 4e-39
Identities = 95/253 (37%), Positives = 145/253 (57%), Gaps = 1/253 (0%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGF-LSTFADYVRAVCRILGLC 590
WF F ++R+PF++Y HL+ AD+ LF + S+ + LS+ Y + L
Sbjct: 55 WFLCFRMRRNPFTVYITHLSIADISLLFCIFILSIDYALDYELSSGHYYTIVTLSVTFLF 114
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
+ TG+ LL AIS+ERCLSVL+P WY RPK SA+VC+LLWALS LVT++ C+
Sbjct: 115 GYNTGLYLLTAISVERCLSVLYPIWYRCHRPKYQSALVCALLWALSCLVTTMEYVMCID- 173
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
E S S CR + F+ IL FLVF PLM++ L++++ + S+KL V++
Sbjct: 174 REEESHSRNDCRAVIIFIAILSFLVFTPLMLVSSTILVVKIR-KNTWASHSSKLYIVIMV 232
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQRLW 1130
+ +FL+ ++ + + + L++ + +++ L INSSA P +YF G K +R
Sbjct: 233 TIIIFLIFAMPMRLLYLLYYEYWSTFGNLHHISLLFSTINSSANPFIYFFVGSSKKKRFK 292
Query: 1131 EPLKVVFQRALRD 1169
E LKVV RA +D
Sbjct: 293 ESLKVVLTRAFKD 305
>ref|NP_944605.2| mas-related G-protein coupled receptor member D [Homo sapiens].
Length = 321
Score = 153 bits (387), Expect = 3e-37
Identities = 105/265 (39%), Positives = 146/265 (55%), Gaps = 9/265 (3%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W GF + R+PF IY L+LA+AD+ +LFS A L T ++T D V + + L
Sbjct: 50 WLLGFRMHRNPFCIYILNLAAADLLFLFSMASTLSLETQPLVNT-TDKVHELMKRLMYFA 108
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFC-VFL 770
+ G+SLL AIS +RCLSVLFP W+ RP+ LSA VC LLW L LL+ + + FC FL
Sbjct: 109 YTVGLSLLTAISTQRCLSVLFPIWFKCHRPRHLSAWVCGLLWTLCLLMNGLTSSFCSKFL 168
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARR-RQRSAKLNHVVL 947
C +D L+ V P+M L L L + V +++ R++ +L VVL
Sbjct: 169 KFNED----RCFRVDMVQAALIMGVLTPVMTLSSLTLFVWVRRSSQQWRRQPTRLFVVVL 224
Query: 948 AMVSVFLVSSIYLGIDWFLFWVFQIPAPFPEY------VTDLCICINSSAKPVVYFLAGR 1109
A V VFL+ S+ L I WF+ + +P PE ++ L ++SSA PV+YFL G
Sbjct: 225 ASVLVFLICSLPLSIYWFVLYWLSLP---PEMQVLCFSLSRLSSSVSSSANPVIYFLVGS 281
Query: 1110 DKSQRL-WEPLKVVFQRALRDGAEL 1181
+S RL L V Q+ALR+ EL
Sbjct: 282 RRSHRLPTRSLGTVLQQALREEPEL 306
>ref|NP_473371.1| mas-related G-protein coupled receptor member X2 [Homo sapiens].
Length = 330
Score = 149 bits (376), Expect = 5e-36
Identities = 96/265 (36%), Positives = 147/265 (55%), Gaps = 9/265 (3%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W GF ++R+ FS+Y L LA AD +L + + ++ F + + + + C
Sbjct: 53 WLLGFRMRRNAFSVYVLSLAGADFLFLCFQIINCLVYLSNFFCSISINFPSFFTTVMTCA 112
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
++ G+S+L +S ERCLSVL+P WY RRP+ LSAVVC LLWALSLL++ + FC FL
Sbjct: 113 YLAGLSMLSTVSTERCLSVLWPIWYRCRRPRHLSAVVCVLLWALSLLLSILEGKFCGFL- 171
Query: 774 HEASGSGAGCRHMDTFLG---ILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVV 944
+ G C+ D I LF+V C LAL++++ C +R + +L +
Sbjct: 172 -FSDGDSGWCQTFDFITAAWLIFLFMVLCG----SSLALLVRILCGSRGLPLT-RLYLTI 225
Query: 945 LAMVSVFLVSSIYLGIDWFL-FWVFQIPAPFPEYVTDLCI---CINSSAKPVVYFLAGRD 1112
L V VFL+ + GI WFL W+++ ++ + + +NSSA P++YF G
Sbjct: 226 LLTVLVFLLCGLPFGIQWFLILWIWKDSDVLFCHIHPVSVVLSSLNSSANPIIYFFVGSF 285
Query: 1113 KSQ-RLWEP-LKVVFQRALRDGAEL 1181
+ Q RL +P LK+ QRAL+D AE+
Sbjct: 286 RKQWRLQQPILKLALQRALQDIAEV 310
>ref|NP_671732.3| mas-related G-protein coupled receptor member X1 [Homo sapiens].
Length = 322
Score = 141 bits (356), Expect = 1e-33
Identities = 91/263 (34%), Positives = 144/263 (54%), Gaps = 7/263 (2%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W G ++R+ FSIY L+LA+AD +L + ++S+L+ F + +IL M
Sbjct: 50 WLLGCRMRRNAFSIYILNLAAADFLFLSGRLIYSLLS-------FISIPHTISKILYPVM 102
Query: 594 ---FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCV 764
+ G+S L A+S ERCLSVL+P WY RP LSAVVC LLWALSLL + + C
Sbjct: 103 MFSYFAGLSFLSAVSTERCLSVLWPIWYRCHRPTHLSAVVCVLLWALSLLRSILEWMLCG 162
Query: 765 FLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVV 944
FL SG+ + F+ + + C ++ L L++++ C +R+ + +L +
Sbjct: 163 FL---FSGADSAWCQTSDFITVAWLIFLCVVLCGSSLVLLIRILCGSRKIPLT-RLYVTI 218
Query: 945 LAMVSVFLVSSIYLGIDWFLF-WVF---QIPAPFPEYVTDLCICINSSAKPVVYFLAGRD 1112
L V VFL+ + GI +FLF W+ ++ V+ +NSSA P++YF G
Sbjct: 219 LLTVLVFLLCGLPFGIQFFLFLWIHVDREVLFCHVHLVSIFLSALNSSANPIIYFFVGSF 278
Query: 1113 KSQRLWEPLKVVFQRALRDGAEL 1181
+ ++ + LK+V QRAL+D +E+
Sbjct: 279 RQRQNRQNLKLVLQRALQDASEV 301
>ref|NP_473373.2| mas-related G-protein coupled receptor member X4 [Homo sapiens].
Length = 322
Score = 134 bits (336), Expect = 2e-31
Identities = 88/261 (33%), Positives = 139/261 (53%), Gaps = 5/261 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W G+ ++R+ SIY L+LA+AD +L F ++ L + +R + +
Sbjct: 50 WLLGYRMRRNAVSIYILNLAAADFLFLS----FQIIRLPLRLINISHLIRKILVSVMTFP 105
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFLG 773
+ TG+S+L AIS ERCLSVL+P WY RRP LSAVVC LLW LSLL + + FC FL
Sbjct: 106 YFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLWGLSLLFSMLEWRFCDFL- 164
Query: 774 HEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLAM 953
SG+ + F+ + + C ++ + L L++++ C +R+ + +L +L
Sbjct: 165 --FSGADSSWCETSDFIPVAWLIFLCVVLCVSSLVLLVRILCGSRKMPLT-RLYVTILLT 221
Query: 954 VSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCIC-----INSSAKPVVYFLAGRDKS 1118
V VFL+ + GI L + + Y +C +NSSA P++YF G +
Sbjct: 222 VLVFLLCGLPFGILGALIYRMHLNLEV-LYCHVYLVCMSLSSLNSSANPIIYFFVGSFRQ 280
Query: 1119 QRLWEPLKVVFQRALRDGAEL 1181
++ + LK+V QRAL+D E+
Sbjct: 281 RQNRQNLKLVLQRALQDKPEV 301
>ref|NP_473372.3| mas-related G-protein coupled receptor member X3 [Homo sapiens].
Length = 322
Score = 130 bits (327), Expect = 2e-30
Identities = 88/263 (33%), Positives = 139/263 (52%), Gaps = 7/263 (2%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W G ++R+ SIY L+L +AD +L + S L + + +IL M
Sbjct: 50 WLLGCRMRRNAVSIYILNLVAADFLFLSGHIICSPLR-------LINIRHPISKILSPVM 102
Query: 594 ---FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCV 764
+ G+S+L AIS ERCLS+L+P WY RRP+ LS+V+C LLWALSLL + + FC
Sbjct: 103 TFPYFIGLSMLSAISTERCLSILWPIWYHCRRPRYLSSVMCVLLWALSLLRSILEWMFCD 162
Query: 765 FLGHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVV 944
FL SG+ + F+ I + C ++ L L++++ C +R+ + +L +
Sbjct: 163 FL---FSGANSVWCETSDFITIAWLVFLCVVLCGSSLVLLVRILCGSRKMPLT-RLYVTI 218
Query: 945 LAMVSVFLVSSIYLGIDWFLF----WVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRD 1112
L V VFL+ + GI W LF +++ V+ +NSSA P++YF G
Sbjct: 219 LLTVLVFLLCGLPFGIQWALFSRIHLDWKVLFCHVHLVSIFLSALNSSANPIIYFFVGSF 278
Query: 1113 KSQRLWEPLKVVFQRALRDGAEL 1181
+ ++ + LK+V QRAL+D E+
Sbjct: 279 RQRQNRQNLKLVLQRALQDTPEV 301
>ref|NP_001034254.1| mas-related G-protein coupled receptor member E [Homo sapiens].
Length = 311
Score = 128 bits (321), Expect = 1e-29
Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 4/261 (1%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTGGFLSTFADYVRAVCRILGLCM 593
W ++ R+PF+IY L +A AD+ +L V V + F +V+ L
Sbjct: 46 WLLSSNVYRNPFAIYLLDVACADLIFLGCHMVAIVPDLLQGRLDFPGFVQTSLATLRFFC 105
Query: 594 FVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCV-FL 770
++ G+SLL A+S+E+CL+ LFP WY RRP+ L+ VC+L WAL LL+ + + C F
Sbjct: 106 YIVGLSLLAAVSVEQCLAALFPAWYSCRRPRHLTTCVCALTWALCLLLHLLLSGACTQFF 165
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
G S CR + +LL L+ C M L L+L+VE R +R ++L
Sbjct: 166 GEP---SRHLCRTLWLVAAVLLALLCC-TMCGASLMLLLRVE-RGPQRPPPRGFPGLILL 220
Query: 951 MVSVFLVSSIYLGIDWF---LFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQ 1121
V +FL + GI W L W IP F + + L ++ +AKPVVYF G + +
Sbjct: 221 TVLLFLFCGLPFGIYWLSRNLLW--YIPHYFYHF-SFLMAAVHCAAKPVVYFCLGSAQGR 277
Query: 1122 RLWEPLKVVFQRALRDGAELG 1184
RL PL++V QRAL D AELG
Sbjct: 278 RL--PLRLVLQRALGDEAELG 296
>ref|NP_001157849.1| mas-related G-protein coupled receptor member G [Homo sapiens].
Length = 289
Score = 117 bits (292), Expect = 3e-26
Identities = 87/258 (33%), Positives = 124/258 (48%), Gaps = 1/258 (0%)
Frame = +3
Query: 414 WFFGFSIKRSPFSIYFLHLASADVGYLFSKAVFSVLNTG-GFLSTFADYVRAVCRILGLC 590
W GF IK+ PFSIY LHLA+AD +L + FSV G T + +L
Sbjct: 35 WNLGFRIKKGPFSIYLLHLAAADFLFLSCRVGFSVAQAALGAQDT-------LYFVLTFL 87
Query: 591 MFVTGVSLLPAISLERCLSVLFPHWYWRRRPKRLSAVVCSLLWALSLLVTSIHNYFCVFL 770
F G+ LL A S+ERCLS LFP Y RP+ SAV+C+L+W +L + C L
Sbjct: 88 WFAVGLWLLAAFSVERCLSDLFPACYQGCRPRHASAVLCALVWTPTLPAVPLPANACGLL 147
Query: 771 GHEASGSGAGCRHMDTFLGILLFLVFCPLMVLPCLALILQVECRARRRQRSAKLNHVVLA 950
+ A H+ + FLV + + L + V C + R + +L +VL
Sbjct: 148 RNSACPLVCPRYHV---ASVTWFLVLARVAWTAGVVLFVWVTCCSTRPR--PRLYGIVLG 202
Query: 951 MVSVFLVSSIYLGIDWFLFWVFQIPAPFPEYVTDLCICINSSAKPVVYFLAGRDKSQRLW 1130
+ + + W L + P + L C+NSS+KP++Y GR +R
Sbjct: 203 ALLLLFFCGLPSVFYWSLQPLLNFLLPVFSPLATLLACVNSSSKPLIYSGLGRQPGKR-- 260
Query: 1131 EPLKVVFQRALRDGAELG 1184
EPL+ V +RAL +GAELG
Sbjct: 261 EPLRSVLRRALGEGAELG 278
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,721,930
Number of extensions: 1240332
Number of successful extensions: 5321
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 5210
Number of HSP's successfully gapped: 29
Length of query: 394
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 289
Effective length of database: 14,835,944
Effective search space: 4287587816
Effective search space used: 4287587816
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008486
(1184 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
***** No hits found ******
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,816,478
Number of extensions: 531
Number of successful extensions: 531
Number of sequences better than 1.0e-05: 0
Number of HSP's gapped: 531
Number of HSP's successfully gapped: 0
Length of query: 1184
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1163
Effective length of database: 2,808,413,156
Effective search space: 3266184500428
Effective search space used: 3266184500428
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)