Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008489
(1457 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071574.1| cleavage and polyadenylation specificity fac... 398 e-111
Alignment gi|XP_002699327.1| PREDICTED: cleavage and polyadenylation spec... 164 1e-40
Alignment gi|XP_881359.3| PREDICTED: cleavage and polyadenylation specifi... 164 1e-40
>ref|NP_001071574.1| cleavage and polyadenylation specificity factor subunit 6 [Bos
taurus].
Length = 551
Score = 398 bits (1023), Expect = e-111
Identities = 193/193 (100%), Positives = 193/193 (100%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
Sbjct: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
Query: 248 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 427
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
Sbjct: 61 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 120
Query: 428 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 607
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
Sbjct: 121 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 180
Query: 608 SGEGKAGPPGGSS 646
SGEGKAGPPGGSS
Sbjct: 181 SGEGKAGPPGGSS 193
Score = 113 bits (283), Expect = 4e-25
Identities = 64/95 (67%), Positives = 65/95 (68%)
Frame = +2
Query: 1163 TNSGMPTSDSXXXXXXXXXXXXXXXXXXXXXXXXXEMDTARTPLSEAEFEEIMNRNRAIS 1342
TNSGMPTSDS EMDTARTPLSEAEFEEIMNRNRAIS
Sbjct: 366 TNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAIS 425
Query: 1343 SSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
SS ISRAVSDASAGDYGSAIETLVTAISLI +
Sbjct: 426 SSAISRAVSDASAGDYGSAIETLVTAISLIKQSKV 460
>ref|XP_002699327.1| PREDICTED: cleavage and polyadenylation specific factor 7, 59kDa
[Bos taurus].
Length = 462
Score = 164 bits (416), Expect = 1e-40
Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 12/200 (6%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 55
Query: 248 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 409
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 410 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT 589
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
Query: 590 ------TQSGQMSGEGKAGP 631
++ S +G+A P
Sbjct: 176 IPPRAHSRDSSDSADGRATP 195
Score = 71.2 bits (173), Expect = 2e-12
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFE+IM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 323 VSEAEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 374
>ref|XP_881359.3| PREDICTED: cleavage and polyadenylation specific factor 7, 59kDa
isoform 4 [Bos taurus].
Length = 462
Score = 164 bits (416), Expect = 1e-40
Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 12/200 (6%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 55
Query: 248 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 409
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 410 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT 589
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
Query: 590 ------TQSGQMSGEGKAGP 631
++ S +G+A P
Sbjct: 176 IPPRAHSRDSSDSADGRATP 195
Score = 71.2 bits (173), Expect = 2e-12
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFE+IM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 323 VSEAEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 374
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 40,913,710
Number of extensions: 1007867
Number of successful extensions: 4990
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4871
Number of HSP's successfully gapped: 6
Length of query: 485
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 379
Effective length of database: 14,174,046
Effective search space: 5371963434
Effective search space used: 5371963434
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008489
(1457 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_531671.2| PREDICTED: similar to cleavage and polyadenylat... 357 2e-98
Alignment gi|XP_533274.2| PREDICTED: similar to pre-mRNA cleavage factor ... 167 3e-41
>ref|XP_531671.2| PREDICTED: similar to cleavage and polyadenylation specific factor
6, 68 kD subunit [Canis familiaris].
Length = 611
Score = 357 bits (916), Expect = 2e-98
Identities = 173/173 (100%), Positives = 173/173 (100%)
Frame = +2
Query: 128 EAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYTGKR 307
EAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYTGKR
Sbjct: 44 EAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYTGKR 103
Query: 308 IALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKL 487
IALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKL
Sbjct: 104 IALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKL 163
Query: 488 MDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSS 646
MDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSS
Sbjct: 164 MDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSS 216
Score = 113 bits (283), Expect = 4e-25
Identities = 64/95 (67%), Positives = 65/95 (68%)
Frame = +2
Query: 1163 TNSGMPTSDSXXXXXXXXXXXXXXXXXXXXXXXXXEMDTARTPLSEAEFEEIMNRNRAIS 1342
TNSGMPTSDS EMDTARTPLSEAEFEEIMNRNRAIS
Sbjct: 426 TNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAIS 485
Query: 1343 SSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
SS ISRAVSDASAGDYGSAIETLVTAISLI +
Sbjct: 486 SSAISRAVSDASAGDYGSAIETLVTAISLIKQSKV 520
>ref|XP_533274.2| PREDICTED: similar to pre-mRNA cleavage factor I, 59 kDa subunit
[Canis familiaris].
Length = 514
Score = 167 bits (422), Expect = 3e-41
Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 12/202 (5%)
Frame = +2
Query: 62 GKMADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPP 241
G M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP
Sbjct: 51 GAMSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPP 105
Query: 242 TVGDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEI 403
V + +P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+
Sbjct: 106 PVRQEPSPKPNNKSPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVEL 165
Query: 404 KFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 583
KF ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+R
Sbjct: 166 KFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQAR 225
Query: 584 KT------TQSGQMSGEGKAGP 631
K ++ S +G+A P
Sbjct: 226 KRIPPRAHSRDSSDSADGRATP 247
Score = 72.4 bits (176), Expect = 1e-12
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFEEIM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 375 VSEAEFEEIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 426
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 42,760,825
Number of extensions: 1044311
Number of successful extensions: 5255
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 5132
Number of HSP's successfully gapped: 4
Length of query: 485
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 378
Effective length of database: 15,307,552
Effective search space: 5786254656
Effective search space used: 5786254656
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008489
(1457 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001182260.1| cleavage and polyadenylation specificity fac... 398 e-111
Alignment gi|XP_003122682.1| PREDICTED: cleavage and polyadenylation spec... 164 9e-41
Alignment gi|XP_003122683.1| PREDICTED: cleavage and polyadenylation spec... 163 3e-40
>ref|NP_001182260.1| cleavage and polyadenylation specificity factor subunit 6 [Sus
scrofa].
Length = 551
Score = 398 bits (1023), Expect = e-111
Identities = 193/193 (100%), Positives = 193/193 (100%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
Sbjct: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
Query: 248 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 427
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
Sbjct: 61 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 120
Query: 428 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 607
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
Sbjct: 121 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 180
Query: 608 SGEGKAGPPGGSS 646
SGEGKAGPPGGSS
Sbjct: 181 SGEGKAGPPGGSS 193
Score = 113 bits (283), Expect = 2e-25
Identities = 64/95 (67%), Positives = 65/95 (68%)
Frame = +2
Query: 1163 TNSGMPTSDSXXXXXXXXXXXXXXXXXXXXXXXXXEMDTARTPLSEAEFEEIMNRNRAIS 1342
TNSGMPTSDS EMDTARTPLSEAEFEEIMNRNRAIS
Sbjct: 366 TNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAIS 425
Query: 1343 SSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
SS ISRAVSDASAGDYGSAIETLVTAISLI +
Sbjct: 426 SSAISRAVSDASAGDYGSAIETLVTAISLIKQSKV 460
>ref|XP_003122682.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 1 [Sus scrofa].
Length = 462
Score = 164 bits (416), Expect = 9e-41
Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 12/200 (6%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 55
Query: 248 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 409
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 410 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT 589
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
Query: 590 ------TQSGQMSGEGKAGP 631
++ S +G+A P
Sbjct: 176 IPPRAHSRDSSDSADGRATP 195
Score = 72.4 bits (176), Expect = 6e-13
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFEEIM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 323 VSEAEFEEIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 374
>ref|XP_003122683.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
7 isoform 2 [Sus scrofa].
Length = 471
Score = 163 bits (412), Expect = 3e-40
Identities = 87/179 (48%), Positives = 119/179 (66%), Gaps = 6/179 (3%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 55
Query: 248 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 409
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 410 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRK 586
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARK 174
Score = 72.4 bits (176), Expect = 6e-13
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFEEIM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 332 VSEAEFEEIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 383
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,402,032
Number of extensions: 654947
Number of successful extensions: 3471
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3314
Number of HSP's successfully gapped: 6
Length of query: 485
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 382
Effective length of database: 8,779,541
Effective search space: 3353784662
Effective search space used: 3353784662
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008489
(1457 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001013409.1| cleavage and polyadenylation specificity fac... 395 e-110
Alignment gi|NP_001157744.1| cleavage and polyadenylation specificity fac... 165 7e-41
Alignment gi|NP_758506.3| cleavage and polyadenylation specificity factor... 164 2e-40
>ref|NP_001013409.1| cleavage and polyadenylation specificity factor subunit 6 [Mus
musculus].
Length = 551
Score = 395 bits (1014), Expect = e-110
Identities = 191/193 (98%), Positives = 192/193 (99%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
Sbjct: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
Query: 248 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 427
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
Sbjct: 61 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 120
Query: 428 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 607
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQ+PVVTPCNKQFLSQFEMQSRKTTQSGQM
Sbjct: 121 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQSPVVTPCNKQFLSQFEMQSRKTTQSGQM 180
Query: 608 SGEGKAGPPGGSS 646
SGEGKAGPPGG S
Sbjct: 181 SGEGKAGPPGGGS 193
Score = 113 bits (283), Expect = 3e-25
Identities = 64/95 (67%), Positives = 65/95 (68%)
Frame = +2
Query: 1163 TNSGMPTSDSXXXXXXXXXXXXXXXXXXXXXXXXXEMDTARTPLSEAEFEEIMNRNRAIS 1342
TNSGMPTSDS EMDTARTPLSEAEFEEIMNRNRAIS
Sbjct: 366 TNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAIS 425
Query: 1343 SSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
SS ISRAVSDASAGDYGSAIETLVTAISLI +
Sbjct: 426 SSAISRAVSDASAGDYGSAIETLVTAISLIKQSKV 460
>ref|NP_001157744.1| cleavage and polyadenylation specificity factor subunit 7 isoform 2
[Mus musculus].
Length = 462
Score = 165 bits (418), Expect = 7e-41
Identities = 91/200 (45%), Positives = 128/200 (64%), Gaps = 12/200 (6%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
M++GVD IDIYAD EEFNQ++E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDSEFNNTDQIDLYDDVLTAASQPSD---DRSSSTEPPPPV 55
Query: 248 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 409
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPAPKPNNKTPAILYTYSGLRSRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 410 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT 589
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
Query: 590 ------TQSGQMSGEGKAGP 631
++ S +G+A P
Sbjct: 176 IPPRAHSRDSSDSADGRATP 195
Score = 72.4 bits (176), Expect = 8e-13
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFEEIM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 323 VSEAEFEEIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 374
>ref|NP_758506.3| cleavage and polyadenylation specificity factor subunit 7 isoform 1
[Mus musculus].
Length = 471
Score = 164 bits (414), Expect = 2e-40
Identities = 87/179 (48%), Positives = 120/179 (67%), Gaps = 6/179 (3%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
M++GVD IDIYAD EEFNQ++E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDSEFNNTDQIDLYDDVLTAASQPSD---DRSSSTEPPPPV 55
Query: 248 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 409
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPAPKPNNKTPAILYTYSGLRSRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 410 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRK 586
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARK 174
Score = 72.4 bits (176), Expect = 8e-13
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFEEIM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 332 VSEAEFEEIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 383
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,748,741
Number of extensions: 864118
Number of successful extensions: 4170
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4043
Number of HSP's successfully gapped: 6
Length of query: 485
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 380
Effective length of database: 12,463,779
Effective search space: 4736236020
Effective search space used: 4736236020
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008489
(1457 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_008938.2| cleavage and polyadenylation specificity factor... 398 e-111
Alignment gi|NP_079087.3| cleavage and polyadenylation specificity factor... 165 1e-40
Alignment gi|NP_001136037.1| cleavage and polyadenylation specificity fac... 164 1e-40
Alignment gi|NP_001129512.1| cleavage and polyadenylation specificity fac... 163 4e-40
>ref|NP_008938.2| cleavage and polyadenylation specificity factor subunit 6 [Homo
sapiens].
Length = 551
Score = 398 bits (1023), Expect = e-111
Identities = 193/193 (100%), Positives = 193/193 (100%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
Sbjct: 1 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 60
Query: 248 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 427
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
Sbjct: 61 GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN 120
Query: 428 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 607
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
Sbjct: 121 GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM 180
Query: 608 SGEGKAGPPGGSS 646
SGEGKAGPPGGSS
Sbjct: 181 SGEGKAGPPGGSS 193
Score = 113 bits (283), Expect = 4e-25
Identities = 64/95 (67%), Positives = 65/95 (68%)
Frame = +2
Query: 1163 TNSGMPTSDSXXXXXXXXXXXXXXXXXXXXXXXXXEMDTARTPLSEAEFEEIMNRNRAIS 1342
TNSGMPTSDS EMDTARTPLSEAEFEEIMNRNRAIS
Sbjct: 366 TNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAIS 425
Query: 1343 SSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
SS ISRAVSDASAGDYGSAIETLVTAISLI +
Sbjct: 426 SSAISRAVSDASAGDYGSAIETLVTAISLIKQSKV 460
>ref|NP_079087.3| cleavage and polyadenylation specificity factor subunit 7 isoform 1
[Homo sapiens].
Length = 514
Score = 165 bits (417), Expect = 1e-40
Identities = 88/181 (48%), Positives = 120/181 (66%), Gaps = 6/181 (3%)
Frame = +2
Query: 62 GKMADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPP 241
G M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP
Sbjct: 42 GAMSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPP 96
Query: 242 TVGDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEI 403
V + P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+
Sbjct: 97 PVRQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVEL 156
Query: 404 KFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 583
KF ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+R
Sbjct: 157 KFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQAR 216
Query: 584 K 586
K
Sbjct: 217 K 217
Score = 71.2 bits (173), Expect = 2e-12
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFE+IM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 375 VSEAEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 426
>ref|NP_001136037.1| cleavage and polyadenylation specificity factor subunit 7 isoform 3
[Homo sapiens].
Length = 462
Score = 164 bits (416), Expect = 1e-40
Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 12/200 (6%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 55
Query: 248 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 409
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 410 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT 589
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
Query: 590 ------TQSGQMSGEGKAGP 631
++ S +G+A P
Sbjct: 176 IPPRAHSRDSSDSADGRATP 195
Score = 71.2 bits (173), Expect = 2e-12
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFE+IM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 323 VSEAEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 374
>ref|NP_001129512.1| cleavage and polyadenylation specificity factor subunit 7 isoform 2
[Homo sapiens].
Length = 471
Score = 163 bits (412), Expect = 4e-40
Identities = 87/179 (48%), Positives = 119/179 (66%), Gaps = 6/179 (3%)
Frame = +2
Query: 68 MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV 247
M++GVD IDIYAD EEFNQ+ E+ DQIDLYDDV++ ++ D DR PP V
Sbjct: 1 MSEGVDLIDIYAD--EEFNQDPEFNNTDQIDLYDDVLTATSQPSD---DRSSSTEPPPPV 55
Query: 248 GDDVG---KGAAPNVVYTYTG---KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF 409
+ P ++YTY+G +R A+Y+G+ +WWTTD+ L + + S+GV D++E+KF
Sbjct: 56 RQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKF 115
Query: 410 FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRK 586
ENRANGQSKG+A V V SE S KL++LLP + L+G+ V P +Q LSQFE Q+RK
Sbjct: 116 AENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARK 174
Score = 71.2 bits (173), Expect = 2e-12
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +2
Query: 1292 LSEAEFEEIMNRNRAISSSTISRAVSDASAGDYGSAIETLVTAISLINSPNI 1447
+SEAEFE+IM RNRAISSS IS+AVS ASAGDY AIETL+TAI++I +
Sbjct: 332 VSEAEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRV 383
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,071,421
Number of extensions: 1028013
Number of successful extensions: 5065
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 4937
Number of HSP's successfully gapped: 8
Length of query: 485
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 379
Effective length of database: 14,802,980
Effective search space: 5610329420
Effective search space used: 5610329420
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008489
(1457 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 339 3e-90
>Sscrofa_Chr05
|| Length = 111506441
Score = 339 bits (171), Expect = 3e-90
Identities = 171/171 (100%)
Strand = Plus / Minus
Query: 1097 cctggaccacctccaggtgccccaccgccagctccacatgtgaacccggctttctttcct 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36164814 cctggaccacctccaggtgccccaccgccagctccacatgtgaacccggctttctttcct 36164755
Query: 1157 ccaccaactaacagcggcatgcctacatcagatagccggggtccaccaccaacagatcca 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36164754 ccaccaactaacagcggcatgcctacatcagatagccggggtccaccaccaacagatcca 36164695
Query: 1217 tatggccgccctccgccatatgataggggtgactatgggcctcccggaagg 1267
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36164694 tatggccgccctccgccatatgataggggtgactatgggcctcccggaagg 36164644
Score = 291 bits (147), Expect = 5e-76
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 441 ggtttgcccttgttggtgttggatctgaagcatcctcaaaaaagttaatggatctgttgc 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36165760 ggtttgcccttgttggtgttggatctgaagcatcctcaaaaaagttaatggatctgttgc 36165701
Query: 501 ctaaaagggaacttcatggtcagaatcctgttgtaactccatgcaataaacagttcctga 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36165700 ctaaaagggaacttcatggtcagaatcctgttgtaactccatgcaataaacagttcctga 36165641
Query: 561 gtcaatttgaaatgcagtccaggaaaa 587
|||||||||||||||||||||||||||
Sbjct: 36165640 gtcaatttgaaatgcagtccaggaaaa 36165614
Score = 230 bits (116), Expect = 2e-57
Identities = 119/120 (99%)
Strand = Plus / Minus
Query: 1265 agggaaatggataccgcacgaacgccattgagtgaagctgagtttgaagaaatcatgaat 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36161868 agggaaatggataccgcacgaacgccattgagtgaagctgagtttgaagaaatcatgaat 36161809
Query: 1325 agaaatagggcaatctcaagcagcactatttcaagggctgtgtctgatgccagtgctggt 1384
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 36161808 agaaatagggcaatctcaagcagcgctatttcaagggctgtgtctgatgccagtgctggt 36161749
Score = 123 bits (62), Expect = 3e-25
Identities = 76/78 (97%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 1382 ggtgattatgggagtgctattgagacattggtaactgcaatttctttaa-taaacagtcc 1440
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 36160842 ggtgattatgggagtgctattgagacattggtaactgcaatttctttaattaaacagtcc 36160783
Query: 1441 aaa-tatctgctgatgat 1457
||| ||||||||||||||
Sbjct: 36160782 aaagtatctgctgatgat 36160765
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 43,607,117
Number of extensions: 386
Number of successful extensions: 386
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 386
Number of HSP's successfully gapped: 4
Length of query: 1457
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1436
Effective length of database: 2,808,413,156
Effective search space: 4032881292016
Effective search space used: 4032881292016
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)