Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008506
(1039 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_786968.2| kininogen-2 isoform I [Bos taurus]. 459 e-129
Alignment gi|NP_001106748.1| kininogen-2 isoform II [Bos taurus]. 454 e-128
Alignment gi|XP_001254091.2| PREDICTED: Kininogen-1-like [Bos taurus]. 226 3e-59
Alignment gi|NP_001029390.1| fetuin-B precursor [Bos taurus]. 57 4e-08
>ref|NP_786968.2| kininogen-2 isoform I [Bos taurus].
Length = 621
Score = 459 bits (1182), Expect = e-129
Identities = 217/284 (76%), Positives = 244/284 (85%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITE 367
MKLI ILFLCSRLLPSLTQESSQEIDCN QDVFKAVD AL KYNS NKSGNQFVLYRITE
Sbjct: 1 MKLITILFLCSRLLPSLTQESSQEIDCNDQDVFKAVDAALTKYNSENKSGNQFVLYRITE 60
Query: 368 VTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSV 547
V ++DNPD FYS KY+IKEGDC QS+KTWQDCDYKD AQAATGECT TVAKRGN KFSV
Sbjct: 61 VARMDNPDTFYSLKYQIKEGDCPFQSNKTWQDCDYKDSAQAATGECTATVAKRGNMKFSV 120
Query: 548 ATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHE 727
A QTC ITPAEGPVVTAQY+CLGC+HPIST SP+L+PVLR+ IQ+FNN + H HLF L E
Sbjct: 121 AIQTCLITPAEGPVVTAQYECLGCVHPISTKSPDLEPVLRYAIQYFNNNTSHSHLFDLKE 180
Query: 728 IKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLRV 907
+K AQRQVV+GWNYE+NY I QTNCSKE+F LTP+C SLS+GD ECTDKAHVD++LR+
Sbjct: 181 VKRAQRQVVSGWNYEVNYSIAQTNCSKEEFSFLTPDCKSLSSGDTGECTDKAHVDVKLRI 240
Query: 908 ASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+SFSQ+C LYP KDF P + CAGCP+ IPV+SP+L EP +HS
Sbjct: 241 SSFSQKCDLYPVKDFVQPPTRLCAGCPKPIPVDSPDLEEPLSHS 284
Score = 80.5 bits (197), Expect = 2e-15
Identities = 56/210 (26%), Positives = 86/210 (40%)
Frame = +2
Query: 260 IDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLV 439
I D+ + A++ +N+ + F L + + Y Y I + +C
Sbjct: 148 ISTKSPDLEPVLRYAIQYFNNNTSHSHLFDLKEVKRAQRQVVSGWNYEVNYSIAQTNCS- 206
Query: 440 QSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGC 619
+ + ++ D K + TGECT + S +Q C + P + V C GC
Sbjct: 207 KEEFSFLTPDCKSLSSGDTGECTDKAHVDVKLRISSFSQKCDLYPVKDFVQPPTRLCAGC 266
Query: 620 LHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTN 799
PI SP+L+ L H+I N + D F + +K A QVVAG Y I + +T
Sbjct: 267 PKPIPVDSPDLEEPLSHSIAKLNAEHDGAFYFKIDTVKKATVQVVAGLKYSIVFIARETT 326
Query: 800 CSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
CSK LT C +G I C +V
Sbjct: 327 CSKGSNEELTKSCEINIHGQILHCDANVYV 356
>ref|NP_001106748.1| kininogen-2 isoform II [Bos taurus].
Length = 619
Score = 454 bits (1169), Expect = e-128
Identities = 214/284 (75%), Positives = 243/284 (85%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITE 367
MKLI ILFLCSRLLPSLTQESSQEIDCN QDVFKAVD AL KYNS NKSGNQFVLYRITE
Sbjct: 1 MKLITILFLCSRLLPSLTQESSQEIDCNDQDVFKAVDAALTKYNSENKSGNQFVLYRITE 60
Query: 368 VTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSV 547
V ++DNPD FYS KY+IKEGDC QS+KTWQDCDYKD AQAATG+CT TVAKRGN KFSV
Sbjct: 61 VARMDNPDTFYSLKYQIKEGDCPFQSNKTWQDCDYKDSAQAATGQCTATVAKRGNMKFSV 120
Query: 548 ATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHE 727
A QTC ITPAEGPVVTAQY+CLGC+HPIST SP+L+PVLR+ IQ+FNN + H HLF L E
Sbjct: 121 AIQTCLITPAEGPVVTAQYECLGCVHPISTKSPDLEPVLRYAIQYFNNNTSHSHLFDLKE 180
Query: 728 IKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLRV 907
+K AQ+QVV+GWNYE+NY I QTNCSKE+F LTP+C SLS+GD ECTDKAHVD++LR+
Sbjct: 181 VKRAQKQVVSGWNYEVNYSIAQTNCSKEEFSFLTPDCKSLSSGDTGECTDKAHVDVKLRI 240
Query: 908 ASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+SFSQ+C LYPG+DF P+ C GCP+ IPV+SP+L E NHS
Sbjct: 241 SSFSQKCDLYPGEDFLPPMV--CVGCPKPIPVDSPDLEEALNHS 282
Score = 80.9 bits (198), Expect = 2e-15
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 3/213 (1%)
Frame = +2
Query: 260 IDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLV 439
I D+ + A++ +N+ + F L + K Y Y I + +C
Sbjct: 148 ISTKSPDLEPVLRYAIQYFNNNTSHSHLFDLKEVKRAQKQVVSGWNYEVNYSIAQTNCS- 206
Query: 440 QSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEG---PVVTAQYDC 610
+ + ++ D K + TGECT + S +Q C + P E P+V C
Sbjct: 207 KEEFSFLTPDCKSLSSGDTGECTDKAHVDVKLRISSFSQKCDLYPGEDFLPPMV-----C 261
Query: 611 LGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIV 790
+GC PI SP+L+ L H+I N + D F + +K A QVV G Y I +
Sbjct: 262 VGCPKPIPVDSPDLEEALNHSIAKLNAEHDGTFYFKIDTVKKATVQVVGGLKYSIVFIAR 321
Query: 791 QTNCSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
+T CSK LT C +G I C +V
Sbjct: 322 ETTCSKGSNEELTKSCEINIHGQILHCDANVYV 354
>ref|XP_001254091.2| PREDICTED: Kininogen-1-like [Bos taurus].
Length = 131
Score = 226 bits (575), Expect = 3e-59
Identities = 110/129 (85%), Positives = 114/129 (88%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITE 367
MKLI ILFLCSRLLPSLTQESSQEIDCN QDVFKAVD AL KYNS NKSGNQFVLYRITE
Sbjct: 1 MKLITILFLCSRLLPSLTQESSQEIDCNDQDVFKAVDAALTKYNSENKSGNQFVLYRITE 60
Query: 368 VTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSV 547
V ++DNPD FYS KY+IKEGDC QS+KTWQDCDYKD AQAATGECT TVAKRGN KFSV
Sbjct: 61 VARMDNPDTFYSLKYQIKEGDCPFQSNKTWQDCDYKDSAQAATGECTATVAKRGNMKFSV 120
Query: 548 ATQTCQITP 574
A QTC ITP
Sbjct: 121 AIQTCLITP 129
>ref|NP_001029390.1| fetuin-B precursor [Bos taurus].
Length = 387
Score = 56.6 bits (135), Expect = 4e-08
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 15/231 (6%)
Frame = +2
Query: 188 MKLIAILFLCSRLL---------PSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNKSGN 340
M ++ +L LC+ + P+ S +DCN V + L+ N K G
Sbjct: 1 MNVLLLLVLCTLAMGCGATSPPQPAARPSSLLSLDCNSSYVLDIANDILQDINRDRKDGY 60
Query: 341 QFVLYRITEVTKIDNP----DIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGEC- 505
L R+++ + +FY F ++ E C V S +W++C+ + ++ G+C
Sbjct: 61 VLSLNRVSDAREHRQEAGLGSLFY-FTLDVLETGCHVLSRTSWKNCEVRIFHESVYGQCK 119
Query: 506 TVTVAKRGNEKFSVATQTCQITP-AEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQH 682
+ + F + C + P ++ ++ DC P S+P ++
Sbjct: 120 AIFYINKEKRIFYLPAYNCTLRPVSQSAIIMTCPDC-PSTSPYDLSNPRFMETATESLAK 178
Query: 683 FNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPE 835
+N++S + L +I Q V G Y + Y I ++ C K + S E
Sbjct: 179 YNSESPSKQ-YSLVKITKTSSQWVFGPAYFVEYLIKESPCVKSEGSSCALE 228
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,150,773
Number of extensions: 1101006
Number of successful extensions: 2990
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2983
Number of HSP's successfully gapped: 6
Length of query: 346
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 243
Effective length of database: 14,273,310
Effective search space: 3468414330
Effective search space used: 3468414330
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008506
(1039 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535836.1| PREDICTED: similar to kininogen 1 [Canis famili... 443 e-124
Alignment gi|XP_535835.2| PREDICTED: similar to Fetuin-B precursor (IRL68... 59 6e-09
>ref|XP_535836.1| PREDICTED: similar to kininogen 1 [Canis familiaris].
Length = 429
Score = 443 bits (1139), Expect = e-124
Identities = 209/285 (73%), Positives = 239/285 (83%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQES-SQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKL+A+LFLCSRLLPSLTQES S+EIDCN +D+FKAVDTALKKYNS N+SGNQFVLYR+T
Sbjct: 1 MKLLAMLFLCSRLLPSLTQESLSEEIDCNDEDLFKAVDTALKKYNSRNQSGNQFVLYRVT 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
E T+ D+PD FYSFKY+I+EG+C VQS KTWQDCDYK+ QAATGEC+ TV KRG KFS
Sbjct: 61 EGTRTDDPDTFYSFKYQIREGNCSVQSGKTWQDCDYKESTQAATGECSATVGKRGKTKFS 120
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
VATQTCQITPAEGPVVTAQYDCLGC+HPIS +SPEL+PVLRH I+HFNN +D HLF L
Sbjct: 121 VATQTCQITPAEGPVVTAQYDCLGCVHPISIASPELEPVLRHAIEHFNNNTDRSHLFALR 180
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
E+K A RQVV GWNYEI Y I QTNCSKE + LTP+C SL NGDI ECTD AH+DLQLR
Sbjct: 181 EVKKAHRQVVTGWNYEITYSIEQTNCSKENYLFLTPDCKSLLNGDIGECTDHAHMDLQLR 240
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+ASFSQ+C L+PG+DF P + C GCP+ IPV+SPEL P HS
Sbjct: 241 IASFSQKCELFPGEDFVQPPSRICLGCPKKIPVDSPELEVPLTHS 285
Score = 73.6 bits (179), Expect = 3e-13
Identities = 50/196 (25%), Positives = 85/196 (43%)
Frame = +2
Query: 302 ALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDP 481
A++ +N+ + F L + + + Y Y I++ +C + + + D K
Sbjct: 163 AIEHFNNNTDRSHLFALREVKKAHRQVVTGWNYEITYSIEQTNCS-KENYLFLTPDCKSL 221
Query: 482 AQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPV 661
GECT + + +Q C++ P E V CLGC I SPEL+
Sbjct: 222 LNGDIGECTDHAHMDLQLRIASFSQKCELFPGEDFVQPPSRICLGCPKKIPVDSPELEVP 281
Query: 662 LRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECT 841
L H+I N +++ F + ++SA Q+VAG + I + +T CSKE L C
Sbjct: 282 LTHSIAKLNAENNGTFYFKIDSVQSATVQMVAGEKFFIQFVARETMCSKESNEELAESCQ 341
Query: 842 SLSNGDIHECTDKAHV 889
G+ +C + +V
Sbjct: 342 INKYGEQLKCEAEVYV 357
>ref|XP_535835.2| PREDICTED: similar to Fetuin-B precursor (IRL685) (16G2) [Canis
familiaris].
Length = 385
Score = 59.3 bits (142), Expect = 6e-09
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 7/194 (3%)
Frame = +2
Query: 263 DCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTK---IDNPDIFYSFKYEIKEGDC 433
DCN+ + + AL+ N K G L R+++V + + +FY ++ E DC
Sbjct: 34 DCNNSGILEVAGFALQDINRDRKDGYVLSLNRVSDVREHRQVAMGSLFY-LTLDVLETDC 92
Query: 434 LVQSDKTWQDCDYKDPAQAATGECTVT--VAKRGNEKFSVATQTCQITPAEGPVVTAQYD 607
V S K W+DC + ++ G+C V K G + + C + P + +
Sbjct: 93 HVLSRKPWKDCGVRHLHESVYGQCKALFYVNKPGRVLY-LPAYNCTLRPVSRRRIHNR-- 149
Query: 608 CLGCLHPIST--SSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINY 781
C C P +T S P + ++ +N++S + L ++ A Q V G Y + Y
Sbjct: 150 CPDCPSPRATDLSDPTVLEAALESLAKYNSESTSKQ-YSLVQVTRASSQWVYGPAYFVEY 208
Query: 782 FIVQTNCSKEKFPS 823
I ++ C+K + S
Sbjct: 209 LIKESPCTKSQVSS 222
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 42,808,604
Number of extensions: 1140455
Number of successful extensions: 2968
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2962
Number of HSP's successfully gapped: 3
Length of query: 346
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 242
Effective length of database: 15,407,560
Effective search space: 3728629520
Effective search space used: 3728629520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008506
(1039 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003358794.1| PREDICTED: kininogen-1-like [Sus scrofa]. 572 e-163
Alignment gi|XP_003132625.1| PREDICTED: fetuin-B-like [Sus scrofa]. 52 5e-07
>ref|XP_003358794.1| PREDICTED: kininogen-1-like [Sus scrofa].
Length = 460
Score = 572 bits (1474), Expect = e-163
Identities = 275/284 (96%), Positives = 276/284 (97%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITE 367
MKLIAILFLCSRLLPSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITE
Sbjct: 1 MKLIAILFLCSRLLPSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITE 60
Query: 368 VTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSV 547
VTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSV
Sbjct: 61 VTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSV 120
Query: 548 ATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHE 727
ATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHE
Sbjct: 121 ATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHE 180
Query: 728 IKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLRV 907
IKSAQRQVVAGWNYEINY IVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLRV
Sbjct: 181 IKSAQRQVVAGWNYEINYLIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLRV 240
Query: 908 ASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
ASFSQECSLY GKDF PL + CAGCPRDIPVNSPEL EP NHS
Sbjct: 241 ASFSQECSLYQGKDFVQPLVKICAGCPRDIPVNSPELEEPLNHS 284
>ref|XP_003132625.1| PREDICTED: fetuin-B-like [Sus scrofa].
Length = 377
Score = 52.0 bits (123), Expect = 5e-07
Identities = 51/240 (21%), Positives = 97/240 (40%), Gaps = 9/240 (3%)
Frame = +2
Query: 266 CNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDI--FYSFKYEIKEGDCLV 439
CN V V+ L++ N K G R+++V + D+ + ++ E C V
Sbjct: 37 CNSSYVLDVVNLVLQEINRNQKDGYVLSPNRVSDVREHRQGDLGSLFYLTLDVIESSCHV 96
Query: 440 QSDKTWQDCDYKDPAQAATGEC-TVTVAKRGNEKFSVATQTCQITP-AEGPVVTAQYDCL 613
S +W+DC ++ G+C + + + C + P + G +VT C
Sbjct: 97 LSKMSWKDCGLTPFHESEYGQCKAIFYINKARRIHYLPAYNCILRPVSPGQLVTL---CP 153
Query: 614 GCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQ 793
C ++ S ++ +++ FN + + L ++ A Q V G Y + Y I +
Sbjct: 154 DCPTHVNMSDTKVLEAATKSLEEFNKRRTS-KKYSLVKVTRALFQWVFGPAYFVEYLIKE 212
Query: 794 TNCSKEKFPSL-----TPECTSLSNGDIHECTDKAHVDLQLRVASFSQECSLYPGKDFCT 958
+ C+K + S PE + +G E + V ++ SF + + PG + T
Sbjct: 213 SPCTKSQASSCALQPPNPEPVGICSGSRSERGPEKFVSVR---CSFFKSQAPTPGDAYST 269
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,415,783
Number of extensions: 704701
Number of successful extensions: 1906
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1901
Number of HSP's successfully gapped: 2
Length of query: 346
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 246
Effective length of database: 8,854,232
Effective search space: 2178141072
Effective search space used: 2178141072
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008506
(1039 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001095882.1| kininogen-1 isoform 3 [Mus musculus]. 347 1e-95
Alignment gi|NP_001095881.1| kininogen-1 isoform 1 [Mus musculus]. 347 1e-95
Alignment gi|NP_075614.1| kininogen-1 isoform 2 [Mus musculus]. 347 1e-95
Alignment gi|NP_001095879.1| kininogen 2 isoform 2 [Mus musculus]. 338 4e-93
Alignment gi|NP_001095880.1| kininogen 2 isoform 3 [Mus musculus]. 338 4e-93
Alignment gi|NP_958763.1| kininogen 2 isoform 1 [Mus musculus]. 338 4e-93
Alignment gi|NP_001077374.1| fetuin-B isoform 3 [Mus musculus]. 60 3e-09
Alignment gi|NP_067539.1| fetuin-B isoform 1 [Mus musculus]. 60 3e-09
>ref|NP_001095882.1| kininogen-1 isoform 3 [Mus musculus].
Length = 480
Score = 347 bits (889), Expect = 1e-95
Identities = 166/285 (58%), Positives = 210/285 (73%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQ-ESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI L LCS LL +LTQ E +QEIDCN + VF+AVD +LK++N G KSGNQ++L+R+
Sbjct: 1 MKLITTLLLCSGLLLTLTQGEEAQEIDCNDEAVFQAVDFSLKQFNPGVKSGNQYMLHRVI 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
E TK D FYSFKY IKEG+C QS WQDCD+KD +AATGECT TV KR NE F
Sbjct: 61 EGTKTDGSPTFYSFKYLIKEGNCSAQSGLAWQDCDFKDAEEAATGECTATVGKRENE-FF 119
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
+ TQTC+I P++ P++ A + C+GC+H IST SP+L+PVL+H+I+HFNN +DH HLF L
Sbjct: 120 IVTQTCKIAPSKAPILKAYFPCIGCVHAISTDSPDLEPVLKHSIEHFNNNTDHSHLFTLR 179
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
++KSA RQVVAG N++I Y IVQTNCSKE+FPSL +C +L NGD EC +D+ +
Sbjct: 180 KVKSAHRQVVAGLNFDITYTIVQTNCSKERFPSLHGDCVALPNGDDGECRGNLFMDINNK 239
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+A+FSQ C+LY G D L + C GCPRDIPV+SPEL E HS
Sbjct: 240 IANFSQSCTLYSGDDLVEALPKPCPGCPRDIPVDSPELKEVLGHS 284
Score = 76.6 bits (187), Expect = 3e-14
Identities = 50/210 (23%), Positives = 87/210 (41%)
Frame = +2
Query: 260 IDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLV 439
I + D+ + +++ +N+ + F L ++ + + + Y I + +C
Sbjct: 148 ISTDSPDLEPVLKHSIEHFNNNTDHSHLFTLRKVKSAHRQVVAGLNFDITYTIVQTNCSK 207
Query: 440 QSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGC 619
+ + D GEC + N K + +Q+C + + V C GC
Sbjct: 208 ERFPSLHG-DCVALPNGDDGECRGNLFMDINNKIANFSQSCTLYSGDDLVEALPKPCPGC 266
Query: 620 LHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTN 799
I SPEL+ VL H+I N ++DH + + +K A QVVAG Y I + +T
Sbjct: 267 PRDIPVDSPELKEVLGHSIAQLNAENDHPFYYKIDTVKKATSQVVAGTKYVIEFIARETK 326
Query: 800 CSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
CSKE L +C G +C ++
Sbjct: 327 CSKESNTELAEDCEIKHLGQSLDCNANVYM 356
>ref|NP_001095881.1| kininogen-1 isoform 1 [Mus musculus].
Length = 661
Score = 347 bits (889), Expect = 1e-95
Identities = 166/285 (58%), Positives = 210/285 (73%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQ-ESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI L LCS LL +LTQ E +QEIDCN + VF+AVD +LK++N G KSGNQ++L+R+
Sbjct: 1 MKLITTLLLCSGLLLTLTQGEEAQEIDCNDEAVFQAVDFSLKQFNPGVKSGNQYMLHRVI 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
E TK D FYSFKY IKEG+C QS WQDCD+KD +AATGECT TV KR NE F
Sbjct: 61 EGTKTDGSPTFYSFKYLIKEGNCSAQSGLAWQDCDFKDAEEAATGECTATVGKRENE-FF 119
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
+ TQTC+I P++ P++ A + C+GC+H IST SP+L+PVL+H+I+HFNN +DH HLF L
Sbjct: 120 IVTQTCKIAPSKAPILKAYFPCIGCVHAISTDSPDLEPVLKHSIEHFNNNTDHSHLFTLR 179
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
++KSA RQVVAG N++I Y IVQTNCSKE+FPSL +C +L NGD EC +D+ +
Sbjct: 180 KVKSAHRQVVAGLNFDITYTIVQTNCSKERFPSLHGDCVALPNGDDGECRGNLFMDINNK 239
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+A+FSQ C+LY G D L + C GCPRDIPV+SPEL E HS
Sbjct: 240 IANFSQSCTLYSGDDLVEALPKPCPGCPRDIPVDSPELKEVLGHS 284
Score = 76.6 bits (187), Expect = 3e-14
Identities = 50/210 (23%), Positives = 87/210 (41%)
Frame = +2
Query: 260 IDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLV 439
I + D+ + +++ +N+ + F L ++ + + + Y I + +C
Sbjct: 148 ISTDSPDLEPVLKHSIEHFNNNTDHSHLFTLRKVKSAHRQVVAGLNFDITYTIVQTNCSK 207
Query: 440 QSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGC 619
+ + D GEC + N K + +Q+C + + V C GC
Sbjct: 208 ERFPSLHG-DCVALPNGDDGECRGNLFMDINNKIANFSQSCTLYSGDDLVEALPKPCPGC 266
Query: 620 LHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTN 799
I SPEL+ VL H+I N ++DH + + +K A QVVAG Y I + +T
Sbjct: 267 PRDIPVDSPELKEVLGHSIAQLNAENDHPFYYKIDTVKKATSQVVAGTKYVIEFIARETK 326
Query: 800 CSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
CSKE L +C G +C ++
Sbjct: 327 CSKESNTELAEDCEIKHLGQSLDCNANVYM 356
>ref|NP_075614.1| kininogen-1 isoform 2 [Mus musculus].
Length = 432
Score = 347 bits (889), Expect = 1e-95
Identities = 166/285 (58%), Positives = 210/285 (73%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQ-ESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI L LCS LL +LTQ E +QEIDCN + VF+AVD +LK++N G KSGNQ++L+R+
Sbjct: 1 MKLITTLLLCSGLLLTLTQGEEAQEIDCNDEAVFQAVDFSLKQFNPGVKSGNQYMLHRVI 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
E TK D FYSFKY IKEG+C QS WQDCD+KD +AATGECT TV KR NE F
Sbjct: 61 EGTKTDGSPTFYSFKYLIKEGNCSAQSGLAWQDCDFKDAEEAATGECTATVGKRENE-FF 119
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
+ TQTC+I P++ P++ A + C+GC+H IST SP+L+PVL+H+I+HFNN +DH HLF L
Sbjct: 120 IVTQTCKIAPSKAPILKAYFPCIGCVHAISTDSPDLEPVLKHSIEHFNNNTDHSHLFTLR 179
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
++KSA RQVVAG N++I Y IVQTNCSKE+FPSL +C +L NGD EC +D+ +
Sbjct: 180 KVKSAHRQVVAGLNFDITYTIVQTNCSKERFPSLHGDCVALPNGDDGECRGNLFMDINNK 239
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+A+FSQ C+LY G D L + C GCPRDIPV+SPEL E HS
Sbjct: 240 IANFSQSCTLYSGDDLVEALPKPCPGCPRDIPVDSPELKEVLGHS 284
Score = 76.6 bits (187), Expect = 3e-14
Identities = 50/210 (23%), Positives = 87/210 (41%)
Frame = +2
Query: 260 IDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLV 439
I + D+ + +++ +N+ + F L ++ + + + Y I + +C
Sbjct: 148 ISTDSPDLEPVLKHSIEHFNNNTDHSHLFTLRKVKSAHRQVVAGLNFDITYTIVQTNCSK 207
Query: 440 QSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGC 619
+ + D GEC + N K + +Q+C + + V C GC
Sbjct: 208 ERFPSLHG-DCVALPNGDDGECRGNLFMDINNKIANFSQSCTLYSGDDLVEALPKPCPGC 266
Query: 620 LHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTN 799
I SPEL+ VL H+I N ++DH + + +K A QVVAG Y I + +T
Sbjct: 267 PRDIPVDSPELKEVLGHSIAQLNAENDHPFYYKIDTVKKATSQVVAGTKYVIEFIARETK 326
Query: 800 CSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
CSKE L +C G +C ++
Sbjct: 327 CSKESNTELAEDCEIKHLGQSLDCNANVYM 356
>ref|NP_001095879.1| kininogen 2 isoform 2 [Mus musculus].
Length = 433
Score = 338 bits (867), Expect = 4e-93
Identities = 162/285 (56%), Positives = 204/285 (71%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQ-ESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI L LCS LL +LTQ E +QEIDCN + VF+AVD +LKK N+ +SGNQFVLYR+T
Sbjct: 1 MKLITTLLLCSGLLLTLTQGEEAQEIDCNDEAVFQAVDASLKKLNARLQSGNQFVLYRVT 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
+ K+D FYSF Y+IKEG+C Q WQDCD+KD +AATGECT T+ K+ N KF
Sbjct: 61 KRAKMDGSATFYSFNYQIKEGNCSAQRGLAWQDCDFKDSEEAATGECTATMGKKEN-KFF 119
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
+ TQTC+ITP +GP+VT +Y C C+HPIS +P+L+PVL+H I++FNN + H HLF L
Sbjct: 120 IVTQTCKITPGKGPIVTEEYHCASCVHPISADNPDLEPVLKHAIEYFNNNTGHSHLFALR 179
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
E+KSAQ QVV G N++I Y IVQTNCSKE+FPSL +C +L NGD EC A +D +
Sbjct: 180 EVKSAQGQVVGGLNFDIIYTIVQTNCSKERFPSLRGDCVALPNGDGGECRGNAFLDTDNK 239
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+ F+Q C L+PG D L + C GCPRDIPV+SPEL E HS
Sbjct: 240 IEDFTQSCDLHPGDDLVEALPKPCPGCPRDIPVDSPELKEVLGHS 284
Score = 84.3 bits (207), Expect = 1e-16
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Frame = +2
Query: 260 IDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLV 439
I ++ D+ + A++ +N+ + F L + + + Y I + +C
Sbjct: 148 ISADNPDLEPVLKHAIEYFNNNTGHSHLFALREVKSAQGQVVGGLNFDIIYTIVQTNCSK 207
Query: 440 QSDKTWQ-DCDYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLG 616
+ + + DC GEC + K TQ+C + P + V C G
Sbjct: 208 ERFPSLRGDCVALPNGDG--GECRGNAFLDTDNKIEDFTQSCDLHPGDDLVEALPKPCPG 265
Query: 617 CLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQT 796
C I SPEL+ VL H+I N ++DH F + +K A QVVAG NY I + +T
Sbjct: 266 CPRDIPVDSPELKEVLGHSIAQLNTENDHPFYFKIDTVKKATSQVVAGTNYVIEFIARET 325
Query: 797 NCSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
CSKE LT +C G +C ++
Sbjct: 326 KCSKESNTELTEDCEIKHLGQSLDCNANVYM 356
>ref|NP_001095880.1| kininogen 2 isoform 3 [Mus musculus].
Length = 462
Score = 338 bits (867), Expect = 4e-93
Identities = 162/285 (56%), Positives = 204/285 (71%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQ-ESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI L LCS LL +LTQ E +QEIDCN + VF+AVD +LKK N+ +SGNQFVLYR+T
Sbjct: 1 MKLITTLLLCSGLLLTLTQGEEAQEIDCNDEAVFQAVDASLKKLNARLQSGNQFVLYRVT 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
+ K+D FYSF Y+IKEG+C Q WQDCD+KD +AATGECT T+ K+ N KF
Sbjct: 61 KRAKMDGSATFYSFNYQIKEGNCSAQRGLAWQDCDFKDSEEAATGECTATMGKKEN-KFF 119
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
+ TQTC+ITP +GP+VT +Y C C+HPIS +P+L+PVL+H I++FNN + H HLF L
Sbjct: 120 IVTQTCKITPGKGPIVTEEYHCASCVHPISADNPDLEPVLKHAIEYFNNNTGHSHLFALR 179
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
E+KSAQ QVV G N++I Y IVQTNCSKE+FPSL +C +L NGD EC A +D +
Sbjct: 180 EVKSAQGQVVGGLNFDIIYTIVQTNCSKERFPSLRGDCVALPNGDGGECRGNAFLDTDNK 239
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+ F+Q C L+PG D L + C GCPRDIPV+SPEL E HS
Sbjct: 240 IEDFTQSCDLHPGDDLVEALPKPCPGCPRDIPVDSPELKEVLGHS 284
Score = 84.3 bits (207), Expect = 1e-16
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Frame = +2
Query: 260 IDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLV 439
I ++ D+ + A++ +N+ + F L + + + Y I + +C
Sbjct: 148 ISADNPDLEPVLKHAIEYFNNNTGHSHLFALREVKSAQGQVVGGLNFDIIYTIVQTNCSK 207
Query: 440 QSDKTWQ-DCDYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLG 616
+ + + DC GEC + K TQ+C + P + V C G
Sbjct: 208 ERFPSLRGDCVALPNGDG--GECRGNAFLDTDNKIEDFTQSCDLHPGDDLVEALPKPCPG 265
Query: 617 CLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQT 796
C I SPEL+ VL H+I N ++DH F + +K A QVVAG NY I + +T
Sbjct: 266 CPRDIPVDSPELKEVLGHSIAQLNTENDHPFYFKIDTVKKATSQVVAGTNYVIEFIARET 325
Query: 797 NCSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
CSKE LT +C G +C ++
Sbjct: 326 KCSKESNTELTEDCEIKHLGQSLDCNANVYM 356
>ref|NP_958763.1| kininogen 2 isoform 1 [Mus musculus].
Length = 644
Score = 338 bits (867), Expect = 4e-93
Identities = 162/285 (56%), Positives = 204/285 (71%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQ-ESSQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI L LCS LL +LTQ E +QEIDCN + VF+AVD +LKK N+ +SGNQFVLYR+T
Sbjct: 1 MKLITTLLLCSGLLLTLTQGEEAQEIDCNDEAVFQAVDASLKKLNARLQSGNQFVLYRVT 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
+ K+D FYSF Y+IKEG+C Q WQDCD+KD +AATGECT T+ K+ N KF
Sbjct: 61 KRAKMDGSATFYSFNYQIKEGNCSAQRGLAWQDCDFKDSEEAATGECTATMGKKEN-KFF 119
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
+ TQTC+ITP +GP+VT +Y C C+HPIS +P+L+PVL+H I++FNN + H HLF L
Sbjct: 120 IVTQTCKITPGKGPIVTEEYHCASCVHPISADNPDLEPVLKHAIEYFNNNTGHSHLFALR 179
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
E+KSAQ QVV G N++I Y IVQTNCSKE+FPSL +C +L NGD EC A +D +
Sbjct: 180 EVKSAQGQVVGGLNFDIIYTIVQTNCSKERFPSLRGDCVALPNGDGGECRGNAFLDTDNK 239
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+ F+Q C L+PG D L + C GCPRDIPV+SPEL E HS
Sbjct: 240 IEDFTQSCDLHPGDDLVEALPKPCPGCPRDIPVDSPELKEVLGHS 284
Score = 84.3 bits (207), Expect = 1e-16
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Frame = +2
Query: 260 IDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLV 439
I ++ D+ + A++ +N+ + F L + + + Y I + +C
Sbjct: 148 ISADNPDLEPVLKHAIEYFNNNTGHSHLFALREVKSAQGQVVGGLNFDIIYTIVQTNCSK 207
Query: 440 QSDKTWQ-DCDYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLG 616
+ + + DC GEC + K TQ+C + P + V C G
Sbjct: 208 ERFPSLRGDCVALPNGDG--GECRGNAFLDTDNKIEDFTQSCDLHPGDDLVEALPKPCPG 265
Query: 617 CLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQT 796
C I SPEL+ VL H+I N ++DH F + +K A QVVAG NY I + +T
Sbjct: 266 CPRDIPVDSPELKEVLGHSIAQLNTENDHPFYFKIDTVKKATSQVVAGTNYVIEFIARET 325
Query: 797 NCSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
CSKE LT +C G +C ++
Sbjct: 326 KCSKESNTELTEDCEIKHLGQSLDCNANVYM 356
>ref|NP_001077374.1| fetuin-B isoform 3 [Mus musculus].
Length = 388
Score = 60.1 bits (144), Expect = 3e-09
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 15/224 (6%)
Frame = +2
Query: 188 MKLIAILFLCSRL------------LPSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNK 331
M L+ +L LC+ LP + CN +V AL+ N K
Sbjct: 1 MGLLRLLVLCTLAACCMARSPPAPPLPQRPLSPLHPLGCNDSEVLAVAGFALQNINRDQK 60
Query: 332 SGNQFVLYRITEVTKIDNPDI--FYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGEC 505
G L R+ +V + D+ + ++ E DC V S K +DC + ++ G+C
Sbjct: 61 DGYMLSLNRVHDVREHYQEDMGSLFYLTLDVLETDCHVLSRKAQKDCKPRMFYESVYGQC 120
Query: 506 TVTV-AKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQH 682
+ + C + P C C PI S+P ++
Sbjct: 121 KAMFHINKPRRVLYLPAYNCTLRPVSKR--KTHTTCPDCPSPIDLSNPSALEAATESLAK 178
Query: 683 FNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTNCSKEK 814
FN+KS + L ++ A Q V+G Y + Y I + C+K +
Sbjct: 179 FNSKSPS-KKYELVKVTKAMNQWVSGPAYYVEYLIKEAPCTKSQ 221
>ref|NP_067539.1| fetuin-B isoform 1 [Mus musculus].
Length = 388
Score = 60.1 bits (144), Expect = 3e-09
Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 15/224 (6%)
Frame = +2
Query: 188 MKLIAILFLCSRL------------LPSLTQESSQEIDCNHQDVFKAVDTALKKYNSGNK 331
M L+ +L LC+ LP + CN +V AL+ N K
Sbjct: 1 MGLLRLLVLCTLAACCMARSPPAPPLPQRPLSPLHPLGCNDSEVLAVAGFALQNINRDQK 60
Query: 332 SGNQFVLYRITEVTKIDNPDI--FYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGEC 505
G L R+ +V + D+ + ++ E DC V S K +DC + ++ G+C
Sbjct: 61 DGYMLSLNRVHDVREHYQEDMGSLFYLTLDVLETDCHVLSRKAQKDCKPRMFYESVYGQC 120
Query: 506 TVTV-AKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQH 682
+ + C + P C C PI S+P ++
Sbjct: 121 KAMFHINKPRRVLYLPAYNCTLRPVSKR--KTHTTCPDCPSPIDLSNPSALEAATESLAK 178
Query: 683 FNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTNCSKEK 814
FN+KS + L ++ A Q V+G Y + Y I + C+K +
Sbjct: 179 FNSKSPS-KKYELVKVTKAMNQWVSGPAYYVEYLIKEAPCTKSQ 221
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,016,276
Number of extensions: 956587
Number of successful extensions: 2758
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 2734
Number of HSP's successfully gapped: 14
Length of query: 346
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 244
Effective length of database: 12,553,887
Effective search space: 3063148428
Effective search space used: 3063148428
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008506
(1039 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001095886.1| kininogen-1 isoform 1 [Homo sapiens]. 429 e-120
Alignment gi|NP_000884.1| kininogen-1 isoform 2 [Homo sapiens]. 429 e-120
Alignment gi|NP_001159923.1| kininogen-1 isoform 3 [Homo sapiens]. 363 e-100
Alignment gi|NP_055190.2| fetuin-B precursor [Homo sapiens]. 61 2e-09
Alignment gi|NP_000403.1| histidine-rich glycoprotein precursor [Homo sap... 50 4e-06
>ref|NP_001095886.1| kininogen-1 isoform 1 [Homo sapiens].
Length = 644
Score = 429 bits (1103), Expect = e-120
Identities = 208/285 (72%), Positives = 232/285 (81%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQES-SQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI ILFLCSRLL SLTQES S+EIDCN +D+FKAVD ALKKYNS N+S NQFVLYRIT
Sbjct: 1 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
E TK D FYSFKYEIKEGDC VQS KTWQDC+YKD A+AATGECT TV KR + KFS
Sbjct: 61 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS 120
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
VATQTCQITPAEGPVVTAQYDCLGC+HPIST SP+L+P+LRH IQ+FNN + H LF L+
Sbjct: 121 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN 180
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
E+K AQRQVVAG N+ I Y IVQTNCSKE F LTP+C SL NGD ECTD A++D+QLR
Sbjct: 181 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR 240
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+ASFSQ C +YPGKDF P + C GCPRDIP NSPEL E H+
Sbjct: 241 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHT 285
Score = 83.6 bits (205), Expect = 3e-16
Identities = 53/195 (27%), Positives = 89/195 (45%)
Frame = +2
Query: 305 LKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPA 484
++ +N+ + + F+L + + + + Y I + +C + + + D K
Sbjct: 164 IQYFNNNTQHSSLFMLNEVKRAQRQVVAGLNFRITYSIVQTNCS-KENFLFLTPDCKSLW 222
Query: 485 QAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVL 664
TGECT + + +Q C I P + V C+GC I T+SPEL+ L
Sbjct: 223 NGDTGECTDNAYIDIQLRIASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETL 282
Query: 665 RHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTS 844
HTI N +++ F + +K A+ QVVAG Y I++ +T CSKE LT C +
Sbjct: 283 THTITKLNAENNATFYFKIDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCET 342
Query: 845 LSNGDIHECTDKAHV 889
G +C + +V
Sbjct: 343 KKLGQSLDCNAEVYV 357
>ref|NP_000884.1| kininogen-1 isoform 2 [Homo sapiens].
Length = 427
Score = 429 bits (1103), Expect = e-120
Identities = 208/285 (72%), Positives = 232/285 (81%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQES-SQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI ILFLCSRLL SLTQES S+EIDCN +D+FKAVD ALKKYNS N+S NQFVLYRIT
Sbjct: 1 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
E TK D FYSFKYEIKEGDC VQS KTWQDC+YKD A+AATGECT TV KR + KFS
Sbjct: 61 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS 120
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
VATQTCQITPAEGPVVTAQYDCLGC+HPIST SP+L+P+LRH IQ+FNN + H LF L+
Sbjct: 121 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN 180
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
E+K AQRQVVAG N+ I Y IVQTNCSKE F LTP+C SL NGD ECTD A++D+QLR
Sbjct: 181 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR 240
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+ASFSQ C +YPGKDF P + C GCPRDIP NSPEL E H+
Sbjct: 241 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHT 285
Score = 83.6 bits (205), Expect = 3e-16
Identities = 53/195 (27%), Positives = 89/195 (45%)
Frame = +2
Query: 305 LKKYNSGNKSGNQFVLYRITEVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPA 484
++ +N+ + + F+L + + + + Y I + +C + + + D K
Sbjct: 164 IQYFNNNTQHSSLFMLNEVKRAQRQVVAGLNFRITYSIVQTNCS-KENFLFLTPDCKSLW 222
Query: 485 QAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVL 664
TGECT + + +Q C I P + V C+GC I T+SPEL+ L
Sbjct: 223 NGDTGECTDNAYIDIQLRIASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETL 282
Query: 665 RHTIQHFNNKSDHLHLFHLHEIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTS 844
HTI N +++ F + +K A+ QVVAG Y I++ +T CSKE LT C +
Sbjct: 283 THTITKLNAENNATFYFKIDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCET 342
Query: 845 LSNGDIHECTDKAHV 889
G +C + +V
Sbjct: 343 KKLGQSLDCNAEVYV 357
>ref|NP_001159923.1| kininogen-1 isoform 3 [Homo sapiens].
Length = 391
Score = 363 bits (931), Expect = e-100
Identities = 183/285 (64%), Positives = 205/285 (71%), Gaps = 1/285 (0%)
Frame = +2
Query: 188 MKLIAILFLCSRLLPSLTQES-SQEIDCNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
MKLI ILFLCSRLL SLTQES S+EIDCN +D+FKAVD ALKKYNS N+S NQFVLYRIT
Sbjct: 1 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT 60
Query: 365 EVTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFS 544
E TK D FYSFKYEIKEGDC VQS KTWQDC+YKD A+AATGECT TV KR + KFS
Sbjct: 61 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS 120
Query: 545 VATQTCQITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLH 724
VATQTCQITPAEGPVVTAQYDCLGC+HPIST SP+L+P+LRH IQ+FNN + H LF L+
Sbjct: 121 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN 180
Query: 725 EIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHVDLQLR 904
E+K AQRQ D ECTD A++D+QLR
Sbjct: 181 EVKRAQRQ------------------------------------DTGECTDNAYIDIQLR 204
Query: 905 VASFSQECSLYPGKDFCTPLCQDCAGCPRDIPVNSPELGEPSNHS 1039
+ASFSQ C +YPGKDF P + C GCPRDIP NSPEL E H+
Sbjct: 205 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHT 249
Score = 80.5 bits (197), Expect = 2e-15
Identities = 50/169 (29%), Positives = 79/169 (46%)
Frame = +2
Query: 383 NPDIFYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGECTVTVAKRGNEKFSVATQTC 562
+PD+ ++ I+ + Q + + K + TGECT + + +Q C
Sbjct: 153 SPDLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQRQDTGECTDNAYIDIQLRIASFSQNC 212
Query: 563 QITPAEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQ 742
I P + V C+GC I T+SPEL+ L HTI N +++ F + +K A+
Sbjct: 213 DIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFKIDNVKKAR 272
Query: 743 RQVVAGWNYEINYFIVQTNCSKEKFPSLTPECTSLSNGDIHECTDKAHV 889
QVVAG Y I++ +T CSKE LT C + G +C + +V
Sbjct: 273 VQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYV 321
>ref|NP_055190.2| fetuin-B precursor [Homo sapiens].
Length = 382
Score = 60.8 bits (146), Expect = 2e-09
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 8/217 (3%)
Frame = +2
Query: 197 IAILFLCSRLL--PSLTQESSQEID--CNHQDVFKAVDTALKKYNSGNKSGNQFVLYRIT 364
+ IL LC + P L S + CN DV AL+ N K G L R+
Sbjct: 9 LCILVLCCGAMSPPQLALNPSALLSRGCNDSDVLAVAGFALRDINKDRKDGYVLRLNRVN 68
Query: 365 EVTKIDNPDI--FYSFKYEIKEGDCLVQSDKTWQDCDYKDPAQAATGEC-TVTVAKRGNE 535
+ + + + ++ E DC V K WQDC + ++ G+C + +
Sbjct: 69 DAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDCGMRIFFESVYGQCKAIFYMNNPSR 128
Query: 536 KFSVATQTCQITP-AEGPVVTAQYDCLGCLHPISTSSPELQPVLRHTIQHFNNKSDHLHL 712
+A C + P ++ + DC + P +S+ ++ ++ +NN++
Sbjct: 129 VLYLAAYNCTLRPVSKKKIYMTCPDCPSSI-PTDSSNHQVLEAATESLAKYNNENTSKQ- 186
Query: 713 FHLHEIKSAQRQVVAGWNYEINYFIVQTNCSKEKFPS 823
+ L ++ A Q V G +Y + Y I ++ C+K + S
Sbjct: 187 YSLFKVTRASSQWVVGPSYFVEYLIKESPCTKSQASS 223
>ref|NP_000403.1| histidine-rich glycoprotein precursor [Homo sapiens].
Length = 525
Score = 49.7 bits (117), Expect = 4e-06
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 6/181 (3%)
Frame = +2
Query: 296 DTALKKYNSGNKSGNQFVLYRITE--VTKIDNPDIFYSFKYEIKEGDCLVQSDKTWQDC- 466
+ AL N + G F L RI + + +++N ++Y +++E DC V S K W DC
Sbjct: 32 EKALDLINKRRRDGYLFQLLRIADAHLDRVENTTVYY-LVLDVQESDCSVLSRKYWNDCE 90
Query: 467 --DYKDPAQAATGECTVTVAKRGNEKFSVATQTCQITPAEGPVVTAQYDCLGCLHPISTS 640
D + P++ G+C V + +E + T + A L
Sbjct: 91 PPDSRRPSEIVIGQCKVIATRHSHESQDLRVIDFNCTTSSVSSALANTKDSPVLIDFFED 150
Query: 641 SPELQPVLRHTIQHFNNKSDHLHLFHLHEIKSAQR-QVVAGWNYEINYFIVQTNCSKEKF 817
+ + ++ + ++D F + I+ R + G Y +++ + NC + F
Sbjct: 151 TERYRKQANKALEKYKEENDDFASFRVDRIERVARVRGGEGTGYFVDFSV--RNCPRHHF 208
Query: 818 P 820
P
Sbjct: 209 P 209
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,230,737
Number of extensions: 1127286
Number of successful extensions: 3036
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3030
Number of HSP's successfully gapped: 8
Length of query: 346
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 243
Effective length of database: 14,901,872
Effective search space: 3621154896
Effective search space used: 3621154896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008506
(1039 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr13 728 0.0
>Sscrofa_Chr13
|| Length = 218635234
Score = 728 bits (367), Expect = 0.0
Identities = 373/375 (99%)
Strand = Plus / Plus
Query: 6 gcagggctttttgtccttttggagaagggcaaacagtacatggcagcaggaatcaaccag 65
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133911286 gcagggccatttgtccttttggagaagggcaaacagtacatggcagcaggaatcaaccag 133911345
Query: 66 ggccctagagcactgaggcagaatcaggagaacctggaggagacagaggctgaagacaat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133911346 ggccctagagcactgaggcagaatcaggagaacctggaggagacagaggctgaagacaat 133911405
Query: 126 taaaatcagcatctaaattggctcccaaccctgggtaaaagtcccagagagaaacttata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133911406 taaaatcagcatctaaattggctcccaaccctgggtaaaagtcccagagagaaacttata 133911465
Query: 186 tcatgaaattaatcgccatccttttcctttgctccaggctgctaccaagtttaactcagg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133911466 tcatgaaattaatcgccatccttttcctttgctccaggctgctaccaagtttaactcagg 133911525
Query: 246 agtcttcgcaagaaattgactgcaaccaccaagatgtatttaaggctgtggacacggctt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133911526 agtcttcgcaagaaattgactgcaaccaccaagatgtatttaaggctgtggacacggctt 133911585
Query: 306 tgaagaaatataacagtggaaacaaaagtggcaaccagtttgtattgtaccgaataaccg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133911586 tgaagaaatataacagtggaaacaaaagtggcaaccagtttgtattgtaccgaataaccg 133911645
Query: 366 aagtcaccaaaattg 380
|||||||||||||||
Sbjct: 133911646 aagtcaccaaaattg 133911660
Score = 351 bits (177), Expect = 5e-94
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 574 agctgagggccctgtggtgacagcccagtatgactgtctgggctgcctgcaccccatatc 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133922349 agctgagggccctgtggtgacagcccagtatgactgtctgggctgcctgcaccccatatc 133922408
Query: 634 aacctcaagccctgaactgcaacctgttctgagacacaccattcaacactttaacaacaa 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133922409 aacctcaagccctgaactgcaacctgttctgagacacaccattcaacactttaacaacaa 133922468
Query: 694 gagtgatcatctccacctctttcatcttcatgaaataaaaagtgcccaaagacaggt 750
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133922469 gagtgatcatctccacctctttcatcttcatgaaataaaaagtgcccaaagacaggt 133922525
Score = 222 bits (112), Expect = 3e-55
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 380 gataatcctgacatattttattccttcaagtacgaaatcaaggagggcgactgtcttgtt 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133914431 gataatcctgacatattttattccttcaagtacgaaatcaaggagggcgactgtcttgtt 133914490
Query: 440 caaagtgacaaaacctggcaggactgtgattacaaagaccctgcacaagctg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133914491 caaagtgacaaaacctggcaggactgtgattacaaagaccctgcacaagctg 133914542
Score = 214 bits (108), Expect = 7e-53
Identities = 111/112 (99%)
Strand = Plus / Plus
Query: 746 caggtggtggccggatggaactatgagattaattattttattgtgcaaacaaattgttcc 805
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 133923918 caggtggtggccggatggaactatgagattaattatttaattgtgcaaacaaattgttcc 133923977
Query: 806 aaggagaagtttccatctttaactccagagtgcacgtccctttcaaatggtg 857
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133923978 aaggagaagtttccatctttaactccagagtgcacgtccctttcaaatggtg 133924029
Score = 168 bits (85), Expect = 4e-39
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 491 gccacaggagaatgcacagtaaccgtggcgaagagaggcaatgagaagttctccgtggct 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133915465 gccacaggagaatgcacagtaaccgtggcgaagagaggcaatgagaagttctccgtggct 133915524
Query: 551 acccagacctgccagattactccag 575
|||||||||||||||||||||||||
Sbjct: 133915525 acccagacctgccagattactccag 133915549
Score = 163 bits (82), Expect = 2e-37
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 857 gatatccatgaatgtacagataaagcacatgtggatcttcagctaagagttgcttccttc 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133934399 gatatccatgaatgtacagataaagcacatgtggatcttcagctaagagttgcttccttc 133934458
Query: 917 tcacaggaatgtagcctttatc 938
||||||||||||||||||||||
Sbjct: 133934459 tcacaggaatgtagcctttatc 133934480
Score = 101 bits (51), Expect = 7e-19
Identities = 79/83 (95%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 939 cagggaaggatttttgtaca-ccactttgtcaagatt-gcgctggctgccccagagatat 996
|||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 133935805 cagggaaggatttt-gtacaaccactt-gtcaagatttgcgctggctgccccagagatat 133935862
Query: 997 acctgtcaacagtccagagctgg 1019
|||||||||||||||||||||||
Sbjct: 133935863 acctgtcaacagtccagagctgg 133935885
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 35,848,397
Number of extensions: 209
Number of successful extensions: 209
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 7
Length of query: 1039
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1018
Effective length of database: 2,808,413,156
Effective search space: 2858964592808
Effective search space used: 2858964592808
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)