Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008547
(1376 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002693055.1| PREDICTED: protein phosphatase 2 (formerly 2... 484 e-136
Alignment gi|XP_001788645.2| PREDICTED: protein phosphatase 2 (formerly 2... 484 e-136
Alignment gi|NP_001032554.1| serine/threonine-protein phosphatase 2A 65 k... 439 e-123
Alignment gi|XP_002700368.1| PREDICTED: alpha isoform of regulatory subun... 391 e-109
Alignment gi|XP_001251533.3| PREDICTED: alpha isoform of regulatory subun... 391 e-109
Alignment gi|XP_002700380.1| PREDICTED: alpha isoform of regulatory subun... 377 e-104
Alignment gi|XP_873880.4| PREDICTED: alpha isoform of regulatory subunit ... 377 e-104
Alignment gi|XP_002697846.1| PREDICTED: protein phosphatase 4, regulatory... 70 4e-12
Alignment gi|XP_587353.3| PREDICTED: protein phosphatase 4, regulatory su... 70 4e-12
>ref|XP_002693055.1| PREDICTED: protein phosphatase 2 (formerly 2A), regulatory subunit A
(PR 65), beta isoform-like [Bos taurus].
Length = 941
Score = 484 bits (1245), Expect = e-136
Identities = 246/249 (98%), Positives = 247/249 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 429 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 488
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 489 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 548
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 549 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 608
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 609 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 668
Query: 722 AQEAISVLA 748
AQEAIS +A
Sbjct: 669 AQEAISAMA 677
Score = 79.7 bits (195), Expect = 6e-15
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ +
Sbjct: 271 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDI 330
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 331 EALVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKI---TLNDLIPAFQNLLKDCEAE 387
Query: 359 IREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACG 526
+R AA + + +L + E + N I+P + + +D N + I LS G
Sbjct: 388 VRAAAAHKVKELCENLPMEGRETIIMNQILPYIKELVSDTNQHVKSALASVIMGLSTILG 447
Query: 527 QEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDM 706
+E T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D
Sbjct: 448 KENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW 507
Query: 707 DVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 508 RVRLAIIEYMPLLA 521
Score = 52.8 bits (125), Expect = 7e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 103 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 161
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 162 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 221
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 222 VKRLASGDWFTSRTSACGLFSVCYPRASVAV-KGEIRQYFRSLCSDDTPMVRRAAASKLG 280
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 281 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 322
>ref|XP_001788645.2| PREDICTED: protein phosphatase 2 (formerly 2A), regulatory subunit A
(PR 65), beta isoform-like isoform 1 [Bos taurus].
Length = 925
Score = 484 bits (1245), Expect = e-136
Identities = 246/249 (98%), Positives = 247/249 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 457 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 516
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 517 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 576
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 577 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 636
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 637 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 696
Query: 722 AQEAISVLA 748
AQEAIS +A
Sbjct: 697 AQEAISAMA 705
Score = 79.7 bits (195), Expect = 6e-15
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ +
Sbjct: 299 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDI 358
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 359 EALVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKI---TLNDLIPAFQNLLKDCEAE 415
Query: 359 IREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACG 526
+R AA + + +L + E + N I+P + + +D N + I LS G
Sbjct: 416 VRAAAAHKVKELCENLPMEGRETIIMNQILPYIKELVSDTNQHVKSALASVIMGLSTILG 475
Query: 527 QEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDM 706
+E T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D
Sbjct: 476 KENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW 535
Query: 707 DVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 536 RVRLAIIEYMPLLA 549
Score = 52.8 bits (125), Expect = 7e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 131 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 189
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 190 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 249
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 250 VKRLASGDWFTSRTSACGLFSVCYPRASVAV-KGEIRQYFRSLCSDDTPMVRRAAASKLG 308
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 309 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 350
>ref|NP_001032554.1| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform [Bos taurus].
Length = 589
Score = 439 bits (1130), Expect = e-123
Identities = 221/251 (88%), Positives = 235/251 (93%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLS ILGK++TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 339 QHVKSALASVIMGLSPILGKDSTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 398
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 399 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 458
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAAT+NL KLV+KFG EWA TI+PKVL M+ DPNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 459 REAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITT 518
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL+MAGD VANVRFNVAKSLQKIGPILD LQ EVKPVL+KL QD+D+DVKYF
Sbjct: 519 KHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPVLEKLTQDQDVDVKYF 578
Query: 722 AQEAISVLALA 754
AQEA++VL+LA
Sbjct: 579 AQEALTVLSLA 589
Score = 79.7 bits (195), Expect = 6e-15
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L +N ++P+F DE VRL + + +++ L
Sbjct: 181 VRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDL 240
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G E L + D +R
Sbjct: 241 EALVMPTLRQAAEDKSWRVRYMVADKFTELHKAVGPEITKTDLVPAFQNLMKDCEAEVRA 300
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVL----VMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA++ + + + + +N I+ ++L + +D N + I LS G++
Sbjct: 301 AASHKVKEFCENLSADCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPILGKDS 360
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 361 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 420
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 421 LAIIEYMPLLA 431
>ref|XP_002700368.1| PREDICTED: alpha isoform of regulatory subunit A, protein phosphatase
2-like [Bos taurus].
Length = 589
Score = 391 bits (1004), Expect = e-109
Identities = 192/251 (76%), Positives = 222/251 (88%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHV+SALASVIMGL ILGK+NTIEHL+PLFLA L+DEC +VRLNIISNL+CV EVIGI+
Sbjct: 339 QHVRSALASVIMGLCPILGKDNTIEHLMPLFLALLRDECSDVRLNIISNLNCVKEVIGIQ 398
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+LS+ LLP I+ELAEDAKWRVRL I+EYMPLLAGQ G+EFFD +L+SLCM+WLVDHVYAI
Sbjct: 399 ELSKFLLPTIMELAEDAKWRVRLVIVEYMPLLAGQFGLEFFDAQLHSLCMSWLVDHVYAI 458
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNL KLV++FG EWA T++P+VL ++ +PNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 459 REAATNNLKKLVEQFGKEWALATVIPRVLTLSEEPNYLHRMTTLFCINVLSEVCGQDITT 518
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL MAGD VANVRFNVAKSLQKIG IL+ LQ EVKP+L+KL QD D+DVKYF
Sbjct: 519 KHMLPTVLYMAGDPVANVRFNVAKSLQKIGSILENSTLQTEVKPILEKLTQDRDVDVKYF 578
Query: 722 AQEAISVLALA 754
AQEA++VL LA
Sbjct: 579 AQEALTVLFLA 589
Score = 76.6 bits (187), Expect = 5e-14
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++P+F DE VRL ++ + +++ L
Sbjct: 181 VRCAAASNLGDFAKVLEIDDIKSEIIPIFSNLASDEQDSVRLLMVEMCVNIAQLLPQEAL 240
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++ + ED WRVR + + L +G E L + D+ +R
Sbjct: 241 EALVMITLCHAGEDTSWRVRYMVADKFTELQTAVGPEITKTGLVPAFQNLMKDYEPEVRA 300
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVL----VMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA++ L + + ++ +N I+ ++L + +D N R I L G++
Sbjct: 301 AASHKLKEFCENLSADYRENVILTEILPFSQELVSDTNQHVRSALASVIMGLCPILGKDN 360
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + ++P+ L + D+ ++VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 361 TIEHLMPLFLALLRDECSDVRLNIISNLNCVKEVIGIQELSKFLLPTIMELAEDAKWRVR 420
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 421 LVIVEYMPLLA 431
Score = 52.8 bits (125), Expect = 7e-07
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 5/221 (2%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++R+N I+ L + +G+ + LLP I+++ D V LA+ E
Sbjct: 13 MSILIDELQNEDIQLRINSINKLSTIALALGVEKTRSELLPLIIDILYDED-EVLLALAE 71
Query: 263 ----YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNT 430
+ PL+ G V + L L V +RE A +L + + ++
Sbjct: 72 QLGTFTPLVGGPEYVHYLLPPLELLA----VVEEAIVREKAVESLRAISHEHSPSHLEDH 127
Query: 431 IVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITTK-QMLPIVLKMAGDQVANVRFNV 607
VP V + R++ +V G I K ++L + D VR
Sbjct: 128 FVPLVKRLVGGDLVNSRISACSLFSVCYP--GVSIAIKAELLQCFRDLCSDDNLLVRCAA 185
Query: 608 AKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQE 730
A +L +L+ D ++ E+ P+ L DE V+ E
Sbjct: 186 ASNLGDFAKVLEIDDIKSEIIPIFSNLASDEQDSVRLLMVE 226
>ref|XP_001251533.3| PREDICTED: alpha isoform of regulatory subunit A, protein phosphatase
2-like [Bos taurus].
Length = 589
Score = 391 bits (1004), Expect = e-109
Identities = 192/251 (76%), Positives = 222/251 (88%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHV+SALASVIMGL ILGK+NTIEHL+PLFLA L+DEC +VRLNIISNL+CV EVIGI+
Sbjct: 339 QHVRSALASVIMGLCPILGKDNTIEHLMPLFLALLRDECSDVRLNIISNLNCVKEVIGIQ 398
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+LS+ LLP I+ELAEDAKWRVRL I+EYMPLLAGQ G+EFFD +L+SLCM+WLVDHVYAI
Sbjct: 399 ELSKFLLPTIMELAEDAKWRVRLVIVEYMPLLAGQFGLEFFDAQLHSLCMSWLVDHVYAI 458
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNL KLV++FG EWA T++P+VL ++ +PNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 459 REAATNNLKKLVEQFGKEWALATVIPRVLTLSEEPNYLHRMTTLFCINVLSEVCGQDITT 518
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL MAGD VANVRFNVAKSLQKIG IL+ LQ EVKP+L+KL QD D+DVKYF
Sbjct: 519 KHMLPTVLYMAGDPVANVRFNVAKSLQKIGSILENSTLQTEVKPILEKLTQDRDVDVKYF 578
Query: 722 AQEAISVLALA 754
AQEA++VL LA
Sbjct: 579 AQEALTVLFLA 589
Score = 76.6 bits (187), Expect = 5e-14
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++P+F DE VRL ++ + +++ L
Sbjct: 181 VRCAAASNLGDFAKVLEIDDIKSEIIPIFSNLASDEQDSVRLLMVEMCVNIAQLLPQEAL 240
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++ + ED WRVR + + L +G E L + D+ +R
Sbjct: 241 EALVMITLCHAGEDTSWRVRYMVADKFTELQTAVGPEITKTGLVPAFQNLMKDYEPEVRA 300
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVL----VMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA++ L + + ++ +N I+ ++L + +D N R I L G++
Sbjct: 301 AASHKLKEFCENLSADYRENVILTEILPFSQELVSDTNQHVRSALASVIMGLCPILGKDN 360
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + ++P+ L + D+ ++VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 361 TIEHLMPLFLALLRDECSDVRLNIISNLNCVKEVIGIQELSKFLLPTIMELAEDAKWRVR 420
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 421 LVIVEYMPLLA 431
Score = 52.8 bits (125), Expect = 7e-07
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 5/221 (2%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++R+N I+ L + +G+ + LLP I+++ D V LA+ E
Sbjct: 13 MSILIDELQNEDIQLRINSINKLSTIALALGVEKTRSELLPLIIDILYDED-EVLLALAE 71
Query: 263 ----YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNT 430
+ PL+ G V + L L V +RE A +L + + ++
Sbjct: 72 QLGTFTPLVGGPEYVHYLLPPLELLA----VVEEAIVREKAVESLRAISHEHSPSHLEDH 127
Query: 431 IVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITTK-QMLPIVLKMAGDQVANVRFNV 607
VP V + R++ +V G I K ++L + D VR
Sbjct: 128 FVPLVKRLVGGDLVNSRISACSLFSVCYP--GVSIAIKAELLQCFRDLCSDDNLLVRCAA 185
Query: 608 AKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQE 730
A +L +L+ D ++ E+ P+ L DE V+ E
Sbjct: 186 ASNLGDFAKVLEIDDIKSEIIPIFSNLASDEQDSVRLLMVE 226
>ref|XP_002700380.1| PREDICTED: alpha isoform of regulatory subunit A, protein phosphatase
2-like [Bos taurus].
Length = 782
Score = 377 bits (969), Expect = e-104
Identities = 185/250 (74%), Positives = 216/250 (86%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHV+SALASVI+GL ILGK+NTIEH++PLFLA L+DEC +VRLN+ISNL + EVIGI+
Sbjct: 339 QHVRSALASVILGLCPILGKDNTIEHIMPLFLALLRDECSDVRLNVISNLHYMKEVIGIQ 398
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
LS LLP I+ELAEDA WRVRL IIEYMPLLAGQ G+EFFD +L+SLCM+WLVDHVYAI
Sbjct: 399 DLSHFLLPTIMELAEDANWRVRLVIIEYMPLLAGQFGLEFFDAQLHSLCMSWLVDHVYAI 458
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNL KLV++FG EWA ++P+VL ++ +PNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 459 REAATNNLKKLVEQFGKEWALAAVIPRVLTLSEEPNYLHRMTTLFCINVLSEVCGQDITT 518
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL MAGD VANVRFNVAKSLQKIG IL+ LQ EVKP+L+KL QD D+DVKYF
Sbjct: 519 KHMLPTVLYMAGDPVANVRFNVAKSLQKIGSILENSTLQTEVKPILEKLTQDRDVDVKYF 578
Query: 722 AQEAISVLAL 751
AQEA++VL+L
Sbjct: 579 AQEALTVLSL 588
Score = 78.6 bits (192), Expect = 1e-14
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+SA AS + + +L ++ ++P+F DE VRL ++ CVN + L
Sbjct: 181 VRSAAASNLGDFTKVLEIDDMKSEIIPIFSNLASDEQDSVRLLMVEV--CVNIA---QLL 235
Query: 188 SQSLLPAIV-----ELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHV 352
Q +L A+V + AED WRVR + E L + E L + DH
Sbjct: 236 PQDILEALVMITLCQAAEDTSWRVRYMVAEKFTELQTAVRPEITKTGLVPAFQNLMQDHE 295
Query: 353 YAIREAATNNLMKLVQKFGTEWAQNTIVPKVL----VMANDPNYLHRMTTLFCINVLSEA 520
+R AA+ L + + ++ +N I+ ++L + +D N R I L
Sbjct: 296 PEVRAAASYKLKEFCENLSADYRENVILTEILPFSQELVSDTNQHVRSALASVILGLCPI 355
Query: 521 CGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDE 700
G++ T + ++P+ L + D+ ++VR NV +L + ++ L + P + +L +D
Sbjct: 356 LGKDNTIEHIMPLFLALLRDECSDVRLNVISNLHYMKEVIGIQDLSHFLLPTIMELAEDA 415
Query: 701 DMDVKYFAQEAISVLA 748
+ V+ E + +LA
Sbjct: 416 NWRVRLVIIEYMPLLA 431
Score = 53.5 bits (127), Expect = 4e-07
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++R+N I+ L + +G+ + LLP I+++ D V LA+ E
Sbjct: 13 MSILIDELQNEDIQLRINSINKLSTIALALGVEKTRSELLPLIIDIMYDED-EVLLALAE 71
Query: 263 ----YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNT 430
+ PL+ G V L L V+ +RE A +L + + ++
Sbjct: 72 QLGTFTPLVGGPEYVHHLLPPLELLA----VEEEAIVREKAVQSLRAISHEHSPSHLEDY 127
Query: 431 IVP--KVLVMANDPNYLHRMTTLFCINVLSEAC--GQEITTK-QMLPIVLKMAGDQVANV 595
VP K LV N N +LF + C G I K ++L + D V
Sbjct: 128 FVPLVKRLVGGNLVNSRISACSLFSV------CYPGVSIAIKAELLQCFRDLCSDNSLVV 181
Query: 596 RFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQE 730
R A +L +L+ D ++ E+ P+ L DE V+ E
Sbjct: 182 RSAAASNLGDFTKVLEIDDMKSEIIPIFSNLASDEQDSVRLLMVE 226
>ref|XP_873880.4| PREDICTED: alpha isoform of regulatory subunit A, protein phosphatase
2-like [Bos taurus].
Length = 782
Score = 377 bits (969), Expect = e-104
Identities = 185/250 (74%), Positives = 216/250 (86%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHV+SALASVI+GL ILGK+NTIEH++PLFLA L+DEC +VRLN+ISNL + EVIGI+
Sbjct: 339 QHVRSALASVILGLCPILGKDNTIEHIMPLFLALLRDECSDVRLNVISNLHYMKEVIGIQ 398
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
LS LLP I+ELAEDA WRVRL IIEYMPLLAGQ G+EFFD +L+SLCM+WLVDHVYAI
Sbjct: 399 DLSHFLLPTIMELAEDANWRVRLVIIEYMPLLAGQFGLEFFDAQLHSLCMSWLVDHVYAI 458
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNL KLV++FG EWA ++P+VL ++ +PNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 459 REAATNNLKKLVEQFGKEWALAAVIPRVLTLSEEPNYLHRMTTLFCINVLSEVCGQDITT 518
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL MAGD VANVRFNVAKSLQKIG IL+ LQ EVKP+L+KL QD D+DVKYF
Sbjct: 519 KHMLPTVLYMAGDPVANVRFNVAKSLQKIGSILENSTLQTEVKPILEKLTQDRDVDVKYF 578
Query: 722 AQEAISVLAL 751
AQEA++VL+L
Sbjct: 579 AQEALTVLSL 588
Score = 78.6 bits (192), Expect = 1e-14
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+SA AS + + +L ++ ++P+F DE VRL ++ CVN + L
Sbjct: 181 VRSAAASNLGDFTKVLEIDDMKSEIIPIFSNLASDEQDSVRLLMVEV--CVNIA---QLL 235
Query: 188 SQSLLPAIV-----ELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHV 352
Q +L A+V + AED WRVR + E L + E L + DH
Sbjct: 236 PQDILEALVMITLCQAAEDTSWRVRYMVAEKFTELQTAVRPEITKTGLVPAFQNLMQDHE 295
Query: 353 YAIREAATNNLMKLVQKFGTEWAQNTIVPKVL----VMANDPNYLHRMTTLFCINVLSEA 520
+R AA+ L + + ++ +N I+ ++L + +D N R I L
Sbjct: 296 PEVRAAASYKLKEFCENLSADYRENVILTEILPFSQELVSDTNQHVRSALASVILGLCPI 355
Query: 521 CGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDE 700
G++ T + ++P+ L + D+ ++VR NV +L + ++ L + P + +L +D
Sbjct: 356 LGKDNTIEHIMPLFLALLRDECSDVRLNVISNLHYMKEVIGIQDLSHFLLPTIMELAEDA 415
Query: 701 DMDVKYFAQEAISVLA 748
+ V+ E + +LA
Sbjct: 416 NWRVRLVIIEYMPLLA 431
Score = 53.5 bits (127), Expect = 4e-07
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++R+N I+ L + +G+ + LLP I+++ D V LA+ E
Sbjct: 13 MSILIDELQNEDIQLRINSINKLSTIALALGVEKTRSELLPLIIDIMYDED-EVLLALAE 71
Query: 263 ----YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNT 430
+ PL+ G V L L V+ +RE A +L + + ++
Sbjct: 72 QLGTFTPLVGGPEYVHHLLPPLELLA----VEEEAIVREKAVQSLRAISHEHSPSHLEDY 127
Query: 431 IVP--KVLVMANDPNYLHRMTTLFCINVLSEAC--GQEITTK-QMLPIVLKMAGDQVANV 595
VP K LV N N +LF + C G I K ++L + D V
Sbjct: 128 FVPLVKRLVGGNLVNSRISACSLFSV------CYPGVSIAIKAELLQCFRDLCSDNSLVV 181
Query: 596 RFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQE 730
R A +L +L+ D ++ E+ P+ L DE V+ E
Sbjct: 182 RSAAASNLGDFTKVLEIDDMKSEIIPIFSNLASDEQDSVRLLMVE 226
>ref|XP_002697846.1| PREDICTED: protein phosphatase 4, regulatory subunit 1-like [Bos
taurus].
Length = 942
Score = 70.1 bits (170), Expect = 4e-12
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 17/256 (6%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ LA I L+ ILG + T L+P+F LKD EVR+ ++ +L +++ I +
Sbjct: 671 VRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKD-LDEVRIGVLKHLHDFLKLLHIDKR 729
Query: 188 SQSLLPAIVELAED--AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+ L L D WR R + E + LL + L + + D V ++
Sbjct: 730 REYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSV 789
Query: 362 REAATNNLMKLVQK--------FGTEWAQNTIVPKVLVMANDPNYLHRMTTLF-CINVLS 514
R + + ++V+K FG + Q + P + R +F C V+
Sbjct: 790 RWISYKLVSEMVRKLHRAAPPTFGADLIQELVES----FGRCPRWSGRQAFVFVCQTVIE 845
Query: 515 EAC-GQEITTKQMLPIVLKMAGDQVANVRFNVAKSL-----QKIGPILDTDALQEEVKPV 676
+ C + Q++P +L +A D+V NVR +AK+L +K + QE V+
Sbjct: 846 DDCLPMDQFAVQLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKEHFLTSASCHQEAVEQT 905
Query: 677 LQKLGQDEDMDVKYFA 724
+ L D D DVKYFA
Sbjct: 906 IMALQMDRDSDVKYFA 921
>ref|XP_587353.3| PREDICTED: protein phosphatase 4, regulatory subunit 1 [Bos taurus].
Length = 1401
Score = 70.1 bits (170), Expect = 4e-12
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 17/256 (6%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ LA I L+ ILG + T L+P+F LKD EVR+ ++ +L +++ I +
Sbjct: 1130 VRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKD-LDEVRIGVLKHLHDFLKLLHIDKR 1188
Query: 188 SQSLLPAIVELAED--AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+ L L D WR R + E + LL + L + + D V ++
Sbjct: 1189 REYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSV 1248
Query: 362 REAATNNLMKLVQK--------FGTEWAQNTIVPKVLVMANDPNYLHRMTTLF-CINVLS 514
R + + ++V+K FG + Q + P + R +F C V+
Sbjct: 1249 RWISYKLVSEMVRKLHRAAPPTFGADLIQELVES----FGRCPRWSGRQAFVFVCQTVIE 1304
Query: 515 EAC-GQEITTKQMLPIVLKMAGDQVANVRFNVAKSL-----QKIGPILDTDALQEEVKPV 676
+ C + Q++P +L +A D+V NVR +AK+L +K + QE V+
Sbjct: 1305 DDCLPMDQFAVQLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKEHFLTSASCHQEAVEQT 1364
Query: 677 LQKLGQDEDMDVKYFA 724
+ L D D DVKYFA
Sbjct: 1365 IMALQMDRDSDVKYFA 1380
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,924,832
Number of extensions: 1367411
Number of successful extensions: 3662
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 3628
Number of HSP's successfully gapped: 26
Length of query: 458
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 352
Effective length of database: 14,174,046
Effective search space: 4989264192
Effective search space used: 4989264192
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008547
(1376 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_862528.1| PREDICTED: similar to beta isoform of regulator... 489 e-138
Alignment gi|XP_862504.1| PREDICTED: similar to protein phosphatase 2 (fo... 489 e-138
Alignment gi|XP_862477.1| PREDICTED: similar to protein phosphatase 2 (fo... 489 e-138
Alignment gi|XP_862425.1| PREDICTED: similar to protein phosphatase 2 (fo... 489 e-138
Alignment gi|XP_862393.1| PREDICTED: similar to protein phosphatase 2 (fo... 489 e-138
Alignment gi|XP_850884.1| PREDICTED: similar to beta isoform of regulator... 483 e-136
Alignment gi|XP_536579.1| PREDICTED: similar to protein phosphatase 2 (fo... 483 e-136
Alignment gi|XP_862962.1| PREDICTED: similar to alpha isoform of regulato... 441 e-124
Alignment gi|XP_862917.1| PREDICTED: similar to alpha isoform of regulato... 441 e-124
Alignment gi|XP_862889.1| PREDICTED: similar to alpha isoform of regulato... 441 e-124
>ref|XP_862528.1| PREDICTED: similar to beta isoform of regulatory subunit A, protein
phosphatase 2 isoform a isoform 8 [Canis familiaris].
Length = 597
Score = 489 bits (1259), Expect = e-138
Identities = 250/251 (99%), Positives = 250/251 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 347 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 406
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 407 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 466
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 467 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 526
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 527 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 586
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 587 AQEAISVLALA 597
Score = 79.3 bits (194), Expect = 8e-15
Identities = 59/247 (23%), Positives = 106/247 (42%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G + L L D +R
Sbjct: 253 ESLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRA 312
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQ 547
AA + + +F N I+P V + +D N + I LS G+E T +
Sbjct: 313 AAAHKVKGKGVQFIETIIMNQILPYVKELVSDTNQHVKSALASVIMGLSTILGKENTIEH 372
Query: 548 MLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQ 727
+LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 373 LLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAII 432
Query: 728 EAISVLA 748
E + +LA
Sbjct: 433 EYMPLLA 439
Score = 53.5 bits (127), Expect = 5e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|XP_862504.1| PREDICTED: similar to protein phosphatase 2 (formerly 2A),
regulatory subunit A (PR 65), beta isoform isoform 7
[Canis familiaris].
Length = 410
Score = 489 bits (1259), Expect = e-138
Identities = 250/251 (99%), Positives = 250/251 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 160 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 219
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 220 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 279
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 280 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 339
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 340 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 399
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 400 AQEAISVLALA 410
Score = 83.2 bits (204), Expect = 5e-16
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 2 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 61
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G + L L D +R
Sbjct: 62 ESLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRA 121
Query: 368 AATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA + + +L + TE + N I+P V + +D N + I LS G+E
Sbjct: 122 AAAHKVKELCENLPTEGRETIIMNQILPYVKELVSDTNQHVKSALASVIMGLSTILGKEN 181
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 182 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 241
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 242 LAIIEYMPLLA 252
>ref|XP_862477.1| PREDICTED: similar to protein phosphatase 2 (formerly 2A),
regulatory subunit A (PR 65), beta isoform isoform 6
[Canis familiaris].
Length = 491
Score = 489 bits (1259), Expect = e-138
Identities = 250/251 (99%), Positives = 250/251 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 241 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 300
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 301 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 360
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 361 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 420
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 421 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 480
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 481 AQEAISVLALA 491
Score = 65.9 bits (159), Expect = 9e-11
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Frame = +2
Query: 197 LLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAAT 376
++P + + AED WRVR + + L +G + L L D +R AA
Sbjct: 146 VMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRAAAA 205
Query: 377 NNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITTK 544
+ + +L + TE + N I+P V + +D N + I LS G+E T +
Sbjct: 206 HKVKELCENLPTEGRETIIMNQILPYVKELVSDTNQHVKSALASVIMGLSTILGKENTIE 265
Query: 545 QMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFA 724
+LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 266 HLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAI 325
Query: 725 QEAISVLA 748
E + +LA
Sbjct: 326 IEYMPLLA 333
Score = 56.2 bits (134), Expect = 7e-08
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 4/234 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLD--CVNEVIGIR 181
V+ +A L +G + T+ L+P F LKD EVR + C N R
Sbjct: 161 VRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRAAAAHKVKELCENLPTEGR 220
Query: 182 Q--LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVY 355
+ + +LP + EL D V+ A+ + L+ LG E E L L +A L D
Sbjct: 221 ETIIMNQILPYVKELVSDTNQHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECP 280
Query: 356 AIREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
+R +NL + + G +++P ++ +A D + R+ + + +L+ G E
Sbjct: 281 EVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEF 340
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQD 697
+++ + + D V +R +L K+ T+ Q + P + + D
Sbjct: 341 FDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPKVLVMAND 394
Score = 53.5 bits (127), Expect = 5e-07
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVM------ANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFN 604
LVM A D ++ R + L +A G +IT ++P + D A VR
Sbjct: 144 SLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRAA 203
Query: 605 VAKSLQKIGPILDTDA----LQEEVKPVLQKLGQDEDMDVK 715
A ++++ L T+ + ++ P +++L D + VK
Sbjct: 204 AAHKVKELCENLPTEGRETIIMNQILPYVKELVSDTNQHVK 244
>ref|XP_862425.1| PREDICTED: similar to protein phosphatase 2 (formerly 2A), regulatory
subunit A (PR 65), beta isoform isoform 4 [Canis
familiaris].
Length = 537
Score = 489 bits (1259), Expect = e-138
Identities = 250/251 (99%), Positives = 250/251 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 287 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 346
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 347 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 406
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 407 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 466
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 467 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 526
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 527 AQEAISVLALA 537
Score = 83.2 bits (204), Expect = 5e-16
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 129 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 188
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G + L L D +R
Sbjct: 189 ESLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRA 248
Query: 368 AATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA + + +L + TE + N I+P V + +D N + I LS G+E
Sbjct: 249 AAAHKVKELCENLPTEGRETIIMNQILPYVKELVSDTNQHVKSALASVIMGLSTILGKEN 308
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 309 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 368
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 369 LAIIEYMPLLA 379
>ref|XP_862393.1| PREDICTED: similar to protein phosphatase 2 (formerly 2A), regulatory
subunit A (PR 65), beta isoform isoform 3 [Canis
familiaris].
Length = 601
Score = 489 bits (1259), Expect = e-138
Identities = 250/251 (99%), Positives = 250/251 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 591 AQEAISVLALA 601
Score = 83.2 bits (204), Expect = 5e-16
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G + L L D +R
Sbjct: 253 ESLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRA 312
Query: 368 AATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA + + +L + TE + N I+P V + +D N + I LS G+E
Sbjct: 313 AAAHKVKELCENLPTEGRETIIMNQILPYVKELVSDTNQHVKSALASVIMGLSTILGKEN 372
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 373 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 432
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 433 LAIIEYMPLLA 443
Score = 53.5 bits (127), Expect = 5e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|XP_850884.1| PREDICTED: similar to beta isoform of regulatory subunit A, protein
phosphatase 2 isoform b isoform 2 [Canis familiaris].
Length = 658
Score = 483 bits (1244), Expect = e-136
Identities = 246/249 (98%), Positives = 247/249 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLA 748
AQEAIS +A
Sbjct: 591 AQEAISAVA 599
Score = 83.2 bits (204), Expect = 5e-16
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G + L L D +R
Sbjct: 253 ESLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRA 312
Query: 368 AATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA + + +L + TE + N I+P V + +D N + I LS G+E
Sbjct: 313 AAAHKVKELCENLPTEGRETIIMNQILPYVKELVSDTNQHVKSALASVIMGLSTILGKEN 372
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 373 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 432
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 433 LAIIEYMPLLA 443
Score = 53.5 bits (127), Expect = 5e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|XP_536579.1| PREDICTED: similar to protein phosphatase 2 (formerly 2A), regulatory
subunit A (PR 65), beta isoform isoform 1 [Canis
familiaris].
Length = 633
Score = 483 bits (1244), Expect = e-136
Identities = 250/259 (96%), Positives = 251/259 (96%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLALA**GTGGKR 778
AQEAIS A G+GG R
Sbjct: 591 AQEAISGTQRA-SGSGGSR 608
Score = 83.2 bits (204), Expect = 5e-16
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G + L L D +R
Sbjct: 253 ESLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKITLHDLIPAFQNLLKDCEAEVRA 312
Query: 368 AATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA + + +L + TE + N I+P V + +D N + I LS G+E
Sbjct: 313 AAAHKVKELCENLPTEGRETIIMNQILPYVKELVSDTNQHVKSALASVIMGLSTILGKEN 372
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 373 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 432
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 433 LAIIEYMPLLA 443
Score = 53.5 bits (127), Expect = 5e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|XP_862962.1| PREDICTED: similar to alpha isoform of regulatory subunit A, protein
phosphatase 2 isoform 6 [Canis familiaris].
Length = 585
Score = 441 bits (1134), Expect = e-124
Identities = 221/251 (88%), Positives = 235/251 (93%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLS ILGK+NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 335 QHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 394
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 395 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 454
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAAT+NL KLV+KFG EWA TI+PKVL M+ DPNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 455 REAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITT 514
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL+MAGD VANVRFNVAKSLQKIGPILD LQ EVKP+L+KL QD+D+DVKYF
Sbjct: 515 KHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYF 574
Query: 722 AQEAISVLALA 754
AQEA++VL+LA
Sbjct: 575 AQEALTVLSLA 585
Score = 67.0 bits (162), Expect = 4e-11
Identities = 53/247 (21%), Positives = 103/247 (41%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L +N ++P+F DE VRL + + +++ L
Sbjct: 181 VRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDL 240
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G E L + D +R
Sbjct: 241 EALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRA 300
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQ 547
AA++ + + + + + +D N + I LS G++ T +
Sbjct: 301 AASHKVKGWCWQPEHSNLWHPLPSPSQELVSDANQHVKSALASVIMGLSPILGKDNTIEH 360
Query: 548 MLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQ 727
+LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 361 LLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAII 420
Query: 728 EAISVLA 748
E + +LA
Sbjct: 421 EYMPLLA 427
>ref|XP_862917.1| PREDICTED: similar to alpha isoform of regulatory subunit A,
protein phosphatase 2 isoform 4 [Canis familiaris].
Length = 480
Score = 441 bits (1134), Expect = e-124
Identities = 221/251 (88%), Positives = 235/251 (93%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLS ILGK+NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 230 QHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 289
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 290 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 349
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAAT+NL KLV+KFG EWA TI+PKVL M+ DPNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 350 REAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITT 409
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL+MAGD VANVRFNVAKSLQKIGPILD LQ EVKP+L+KL QD+D+DVKYF
Sbjct: 410 KHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYF 469
Query: 722 AQEAISVLALA 754
AQEA++VL+LA
Sbjct: 470 AQEALTVLSLA 480
Score = 67.0 bits (162), Expect = 4e-11
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Frame = +2
Query: 17 ALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIG------- 175
ALA + +T++G + LLP + E VR + +L ++
Sbjct: 68 ALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAH 127
Query: 176 IRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVY 355
L ++P + + AED WRVR + + L +G E L + D
Sbjct: 128 FEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEA 187
Query: 356 AIREAATNNLMKLVQKFGTEWAQNTIVPKVLV----MANDPNYLHRMTTLFCINVLSEAC 523
+R AA++ + + + + +N I+ ++L + +D N + I LS
Sbjct: 188 EVRAAASHKVKEFCENLSADCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPIL 247
Query: 524 GQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDED 703
G++ T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D
Sbjct: 248 GKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAK 307
Query: 704 MDVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 308 WRVRLAIIEYMPLLA 322
Score = 53.1 bits (126), Expect = 6e-07
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 4/211 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLD--CVNEVIGIR 181
V+ +A L +G E T L+P F +KD EVR + C N R
Sbjct: 150 VRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCR 209
Query: 182 Q--LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVY 355
+ + +LP I EL DA V+ A+ + L+ LG + E L L +A L D
Sbjct: 210 ENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECP 269
Query: 356 AIREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
+R +NL + + G +++P ++ +A D + R+ + + +L+ G E
Sbjct: 270 EVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEF 329
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKI 628
+++ + + D V +R +L+K+
Sbjct: 330 FDEKLNSLCMAWLVDHVYAIREAATSNLKKL 360
>ref|XP_862889.1| PREDICTED: similar to alpha isoform of regulatory subunit A,
protein phosphatase 2 isoform 3 [Canis familiaris].
Length = 267
Score = 441 bits (1134), Expect = e-124
Identities = 221/251 (88%), Positives = 235/251 (93%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLS ILGK+NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 17 QHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 76
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 77 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 136
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAAT+NL KLV+KFG EWA TI+PKVL M+ DPNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 137 REAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITT 196
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL+MAGD VANVRFNVAKSLQKIGPILD LQ EVKP+L+KL QD+D+DVKYF
Sbjct: 197 KHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYF 256
Query: 722 AQEAISVLALA 754
AQEA++VL+LA
Sbjct: 257 AQEALTVLSLA 267
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 54,084,017
Number of extensions: 1402186
Number of successful extensions: 3904
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 3828
Number of HSP's successfully gapped: 38
Length of query: 458
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 352
Effective length of database: 15,340,888
Effective search space: 5399992576
Effective search space used: 5399992576
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008547
(1376 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003357335.1| PREDICTED: serine/threonine-protein phosphat... 491 e-139
Alignment gi|XP_003357333.1| PREDICTED: serine/threonine-protein phosphat... 491 e-139
Alignment gi|XP_003357337.1| PREDICTED: serine/threonine-protein phosphat... 486 e-138
Alignment gi|XP_003357336.1| PREDICTED: serine/threonine-protein phosphat... 486 e-138
Alignment gi|NP_999189.1| serine/threonine-protein phosphatase 2A 65 kDa ... 441 e-124
Alignment gi|XP_003357334.1| PREDICTED: serine/threonine-protein phosphat... 420 e-118
Alignment gi|XP_003361009.1| PREDICTED: serine/threonine-protein phosphat... 67 3e-11
>ref|XP_003357335.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa
regulatory subunit A beta isoform isoform 3 [Sus
scrofa].
Length = 474
Score = 491 bits (1263), Expect = e-139
Identities = 251/251 (100%), Positives = 251/251 (100%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 224 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 283
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 284 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 343
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT
Sbjct: 344 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 403
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 404 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 463
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 464 AQEAISVLALA 474
Score = 66.2 bits (160), Expect = 4e-11
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 7/215 (3%)
Frame = +2
Query: 125 VRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFF 304
VRL + + +++ L ++P + + AED WRVR + + L +G +
Sbjct: 105 VRLLAVEACVSIAQLLSQDDLEALVMPTLRQAAEDKSWRVRYMVADKFSELQRAVGPKI- 163
Query: 305 DEKLNSLCMAW---LVDHVYAIREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMAND 463
LN L A+ L D +R AA + + +L + E + N I+P + + +D
Sbjct: 164 --TLNDLIPAFQNLLKDCEAEVRAAAAHKVKELCENLPVEGRETIIMNQILPCIKELVSD 221
Query: 464 PNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILD 643
N + I LS G+E T + +LP+ L D+ VR N+ +L + ++
Sbjct: 222 TNQHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIG 281
Query: 644 TDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
L + + P + +L +D V+ E + +LA
Sbjct: 282 IRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLA 316
Score = 59.3 bits (142), Expect = 5e-09
Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 4/253 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLD--CVNEVIGIR 181
V+ +A L +G + T+ L+P F LKD EVR + C N + R
Sbjct: 144 VRYMVADKFSELQRAVGPKITLNDLIPAFQNLLKDCEAEVRAAAAHKVKELCENLPVEGR 203
Query: 182 Q--LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVY 355
+ + +LP I EL D V+ A+ + L+ LG E E L L +A L D
Sbjct: 204 ETIIMNQILPCIKELVSDTNQHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECP 263
Query: 356 AIREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
+R +NL + + G +++P ++ +A D + R+ + + +L+ G E
Sbjct: 264 EVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEF 323
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
+++ + + D V +R +L K+ T+ Q + P + + D + +
Sbjct: 324 FDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHR 383
Query: 716 YFAQEAISVLALA 754
I+VL+ A
Sbjct: 384 MTTLFCINVLSEA 396
Score = 49.3 bits (116), Expect = 5e-06
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + ++R A + + Q + + ++P
Sbjct: 84 QLGNFTGLVGGPDFAHCL-----------LDSVRLLAVEACVSIAQLLSQDDLEALVMPT 132
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
+ A D ++ R + L A G +IT ++P + D A VR A ++
Sbjct: 133 LRQAAEDKSWRVRYMVADKFSELQRAVGPKITLNDLIPAFQNLLKDCEAEVRAAAAHKVK 192
Query: 623 KIGPILDTDA----LQEEVKPVLQKLGQDEDMDVK 715
++ L + + ++ P +++L D + VK
Sbjct: 193 ELCENLPVEGRETIIMNQILPCIKELVSDTNQHVK 227
>ref|XP_003357333.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory
subunit A beta isoform isoform 1 [Sus scrofa].
Length = 601
Score = 491 bits (1263), Expect = e-139
Identities = 251/251 (100%), Positives = 251/251 (100%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 591 AQEAISVLALA 601
Score = 79.7 bits (195), Expect = 3e-15
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQDDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 253 EALVMPTLRQAAEDKSWRVRYMVADKFSELQRAVGPKI---TLNDLIPAFQNLLKDCEAE 309
Query: 359 IREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACG 526
+R AA + + +L + E + N I+P + + +D N + I LS G
Sbjct: 310 VRAAAAHKVKELCENLPVEGRETIIMNQILPCIKELVSDTNQHVKSALASVIMGLSTILG 369
Query: 527 QEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDM 706
+E T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D
Sbjct: 370 KENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW 429
Query: 707 DVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 430 RVRLAIIEYMPLLA 443
Score = 53.5 bits (127), Expect = 3e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|XP_003357337.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory
subunit A beta isoform isoform 5 [Sus scrofa].
Length = 603
Score = 486 bits (1252), Expect = e-138
Identities = 248/249 (99%), Positives = 249/249 (100%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 287 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 346
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 347 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 406
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT
Sbjct: 407 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 466
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 467 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 526
Query: 722 AQEAISVLA 748
AQEAISV+A
Sbjct: 527 AQEAISVVA 535
Score = 79.7 bits (195), Expect = 3e-15
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 129 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQDDL 188
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 189 EALVMPTLRQAAEDKSWRVRYMVADKFSELQRAVGPKI---TLNDLIPAFQNLLKDCEAE 245
Query: 359 IREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACG 526
+R AA + + +L + E + N I+P + + +D N + I LS G
Sbjct: 246 VRAAAAHKVKELCENLPVEGRETIIMNQILPCIKELVSDTNQHVKSALASVIMGLSTILG 305
Query: 527 QEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDM 706
+E T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D
Sbjct: 306 KENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW 365
Query: 707 DVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 366 RVRLAIIEYMPLLA 379
>ref|XP_003357336.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory
subunit A beta isoform isoform 4 [Sus scrofa].
Length = 667
Score = 486 bits (1252), Expect = e-138
Identities = 248/249 (99%), Positives = 249/249 (100%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLA 748
AQEAISV+A
Sbjct: 591 AQEAISVVA 599
Score = 79.7 bits (195), Expect = 3e-15
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQDDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 253 EALVMPTLRQAAEDKSWRVRYMVADKFSELQRAVGPKI---TLNDLIPAFQNLLKDCEAE 309
Query: 359 IREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACG 526
+R AA + + +L + E + N I+P + + +D N + I LS G
Sbjct: 310 VRAAAAHKVKELCENLPVEGRETIIMNQILPCIKELVSDTNQHVKSALASVIMGLSTILG 369
Query: 527 QEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDM 706
+E T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D
Sbjct: 370 KENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW 429
Query: 707 DVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 430 RVRLAIIEYMPLLA 443
Score = 53.5 bits (127), Expect = 3e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|NP_999189.1| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform [Sus scrofa].
Length = 589
Score = 441 bits (1134), Expect = e-124
Identities = 221/251 (88%), Positives = 235/251 (93%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLS ILGK+NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 339 QHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 398
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 399 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 458
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAAT+NL KLV+KFG EWA TI+PKVL M+ DPNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 459 REAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITT 518
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL+MAGD VANVRFNVAKSLQKIGPILD LQ EVKP+L+KL QD+D+DVKYF
Sbjct: 519 KHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYF 578
Query: 722 AQEAISVLALA 754
AQEA++VL+LA
Sbjct: 579 AQEALTVLSLA 589
Score = 79.7 bits (195), Expect = 3e-15
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L +N ++P+F DE VRL + + +++ L
Sbjct: 181 VRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDL 240
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G E L + D +R
Sbjct: 241 EALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRA 300
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVL----VMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA++ + + + + +N I+ ++L + +D N + I LS G++
Sbjct: 301 AASHKVKEFCENLSADCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPILGKDN 360
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 361 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 420
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 421 LAIIEYMPLLA 431
>ref|XP_003357334.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa
regulatory subunit A beta isoform isoform 2 [Sus
scrofa].
Length = 556
Score = 420 bits (1080), Expect = e-118
Identities = 213/214 (99%), Positives = 214/214 (100%)
Frame = +2
Query: 113 ECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLG 292
+CPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLG
Sbjct: 343 KCPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLG 402
Query: 293 VEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNY 472
VEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNY
Sbjct: 403 VEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNY 462
Query: 473 LHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDA 652
LHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDA
Sbjct: 463 LHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDA 522
Query: 653 LQEEVKPVLQKLGQDEDMDVKYFAQEAISVLALA 754
LQEEVKPVLQKLGQDEDMDVKYFAQEAISVLALA
Sbjct: 523 LQEEVKPVLQKLGQDEDMDVKYFAQEAISVLALA 556
Score = 62.4 bits (150), Expect = 6e-10
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQDDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 253 EALVMPTLRQAAEDKSWRVRYMVADKFSELQRAVGPKI---TLNDLIPAFQNLLKDCEAE 309
Query: 359 IREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNY-LHRMTTLFCINVLSEACGQEI 535
+R AA + + +L + E + I+ ++L P L+ ++ L C+N E G
Sbjct: 310 VRAAAAHKVKELCENLPVEGRETIIMNQILPCIKCPEVRLNIISNLDCVN---EVIGIRQ 366
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEV 667
++ +LP ++++A D VR + + + + L + E++
Sbjct: 367 LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKL 410
Score = 53.5 bits (127), Expect = 3e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKSEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|XP_003361009.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit
1-like, partial [Sus scrofa].
Length = 577
Score = 66.6 bits (161), Expect = 3e-11
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 11/250 (4%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ LA I L+ ILG + T L+P+F LKD EVR+ ++ +L +++ I +
Sbjct: 310 VRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKD-LDEVRIGVLKHLHDFLKLLHIDKR 368
Query: 188 SQSLLPAIVELAED--AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+ L L D WR R + E + LL + L + + D V ++
Sbjct: 369 REYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSV 428
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLF-CINVLSEAC-GQEI 535
R + + ++V+K + V + + R +F C V+ + C +
Sbjct: 429 RWISYKLVSEMVRKLHQAAPPSFGVDLIRELVESFGRCXRQAFVFVCQTVIEDDCLPMDQ 488
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDAL-------QEEVKPVLQKLGQ 694
++P +L +A D+V NVR +AK+L++ +L+ + QE V+ + L
Sbjct: 489 FALHLMPHLLTLANDRVPNVRVLLAKTLRQT--LLEKECFLTSASCHQEAVEQTIMALQM 546
Query: 695 DEDMDVKYFA 724
D D DVKYFA
Sbjct: 547 DRDSDVKYFA 556
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,339,214
Number of extensions: 871712
Number of successful extensions: 2420
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 2390
Number of HSP's successfully gapped: 18
Length of query: 458
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 356
Effective length of database: 8,804,438
Effective search space: 3134379928
Effective search space used: 3134379928
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008547
(1376 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_082890.2| serine/threonine-protein phosphatase 2A 65 kDa ... 483 e-136
Alignment gi|NP_001029257.1| serine/threonine-protein phosphatase 2A 65 k... 478 e-135
Alignment gi|NP_058587.1| serine/threonine-protein phosphatase 2A 65 kDa ... 441 e-124
Alignment gi|NP_001107603.1| serine/threonine-protein phosphatase 4 regul... 68 1e-11
Alignment gi|NP_666193.2| serine/threonine-protein phosphatase 4 regulato... 68 1e-11
>ref|NP_082890.2| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform isoform b [Mus musculus].
Length = 601
Score = 483 bits (1242), Expect = e-136
Identities = 246/251 (98%), Positives = 249/251 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLST+LGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTVLGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACG+EITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGKEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDT+ALQ EVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 591 AQEAISVLALA 601
Score = 81.3 bits (199), Expect = 2e-15
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKTEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G + L + L D +R
Sbjct: 253 EALVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKIALSDLIPAFQSLLRDCEAEVRA 312
Query: 368 AATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA + + +L + E + N I+P + + +D N + I LS G+E
Sbjct: 313 AAAHKVRELCENLPAEGRETVIMNQILPYIKELVSDTNQHVKSALASVIMGLSTVLGKEN 372
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 373 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 432
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 433 LAIIEYMPLLA 443
Score = 53.1 bits (126), Expect = 5e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKTEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|NP_001029257.1| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform isoform a [Mus musculus].
Length = 658
Score = 478 bits (1231), Expect = e-135
Identities = 243/249 (97%), Positives = 247/249 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLST+LGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTVLGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACG+EITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGKEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDT+ALQ EVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLA 748
AQEAISV+A
Sbjct: 591 AQEAISVVA 599
Score = 81.3 bits (199), Expect = 2e-15
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKTEIVPLFTNLASDEQDSVRLLAVEACVSIAQLLSQEDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G + L + L D +R
Sbjct: 253 EALVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPKIALSDLIPAFQSLLRDCEAEVRA 312
Query: 368 AATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA + + +L + E + N I+P + + +D N + I LS G+E
Sbjct: 313 AAAHKVRELCENLPAEGRETVIMNQILPYIKELVSDTNQHVKSALASVIMGLSTVLGKEN 372
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 373 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 432
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 433 LAIIEYMPLLA 443
Score = 53.1 bits (126), Expect = 5e-07
Identities = 47/222 (21%), Positives = 91/222 (40%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPL 143
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
V +A+ + R + +V + ++ + D VR A L
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKA-EIRQHFRSLCSDDTPMVRRAAASKLG 202
Query: 623 KIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
+ +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 203 EFAKVLELDSVKTEIVPLFTNLASDEQDSVRLLAVEACVSIA 244
>ref|NP_058587.1| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform [Mus musculus].
Length = 589
Score = 441 bits (1134), Expect = e-124
Identities = 221/251 (88%), Positives = 235/251 (93%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLS ILGK+NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 339 QHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 398
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 399 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 458
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAAT+NL KLV+KFG EWA TI+PKVL M+ DPNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 459 REAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITT 518
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL+MAGD VANVRFNVAKSLQKIGPILD LQ EVKP+L+KL QD+D+DVKYF
Sbjct: 519 KHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYF 578
Query: 722 AQEAISVLALA 754
AQEA++VL+LA
Sbjct: 579 AQEALTVLSLA 589
Score = 79.7 bits (195), Expect = 5e-15
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L +N ++P+F DE VRL + + +++ L
Sbjct: 181 VRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDL 240
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G E L + D +R
Sbjct: 241 EALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRA 300
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVL----VMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA++ + + + + +N I+ ++L + +D N + I LS G++
Sbjct: 301 AASHKVKEFCENLSADCRENVIMTQILPCIKELVSDANQHVKSALASVIMGLSPILGKDN 360
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 361 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 420
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 421 LAIIEYMPLLA 431
>ref|NP_001107603.1| serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform b
[Mus musculus].
Length = 934
Score = 68.2 bits (165), Expect = 1e-11
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 13/252 (5%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ LA I L+ ILG + T L+P+F LKD EVR+ ++ +L +++ I +
Sbjct: 663 VRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKD-LDEVRIGVLKHLHDFLKLLHIDKR 721
Query: 188 SQSLLPAIVELAED--AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+ L L D WR R + E + LL + L + + D V ++
Sbjct: 722 REYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSV 781
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMAND----PNYLHRMTTLF-CINVLSEAC- 523
R + + ++V+K T V + + + P + R +F C V+ + C
Sbjct: 782 RWISYKLVSEMVKKLHTATPPTFGVDLINELVENFGRCPKWSGRQAFVFVCQTVIEDDCL 841
Query: 524 GQEITTKQMLPIVLKMAGDQVANVRFNVAKSL-----QKIGPILDTDALQEEVKPVLQKL 688
+ ++P +L +A D+V NVR +AK+L +K + QE V+ + L
Sbjct: 842 PMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKEYFLASASCHQEAVEQTIMAL 901
Query: 689 GQDEDMDVKYFA 724
D D DVKYFA
Sbjct: 902 QMDRDSDVKYFA 913
>ref|NP_666193.2| serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform a
[Mus musculus].
Length = 951
Score = 68.2 bits (165), Expect = 1e-11
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 13/252 (5%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ LA I L+ ILG + T L+P+F LKD EVR+ ++ +L +++ I +
Sbjct: 680 VRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKD-LDEVRIGVLKHLHDFLKLLHIDKR 738
Query: 188 SQSLLPAIVELAED--AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+ L L D WR R + E + LL + L + + D V ++
Sbjct: 739 REYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSV 798
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMAND----PNYLHRMTTLF-CINVLSEAC- 523
R + + ++V+K T V + + + P + R +F C V+ + C
Sbjct: 799 RWISYKLVSEMVKKLHTATPPTFGVDLINELVENFGRCPKWSGRQAFVFVCQTVIEDDCL 858
Query: 524 GQEITTKQMLPIVLKMAGDQVANVRFNVAKSL-----QKIGPILDTDALQEEVKPVLQKL 688
+ ++P +L +A D+V NVR +AK+L +K + QE V+ + L
Sbjct: 859 PMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKEYFLASASCHQEAVEQTIMAL 918
Query: 689 GQDEDMDVKYFA 724
D D DVKYFA
Sbjct: 919 QMDRDSDVKYFA 930
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 45,693,488
Number of extensions: 1194311
Number of successful extensions: 3166
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3142
Number of HSP's successfully gapped: 10
Length of query: 458
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 353
Effective length of database: 12,463,779
Effective search space: 4399713987
Effective search space used: 4399713987
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008547
(1376 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001171034.1| serine/threonine-protein phosphatase 2A 65 k... 483 e-136
Alignment gi|NP_002707.3| serine/threonine-protein phosphatase 2A 65 kDa ... 483 e-136
Alignment gi|NP_859051.1| serine/threonine-protein phosphatase 2A 65 kDa ... 479 e-135
Alignment gi|NP_859050.1| serine/threonine-protein phosphatase 2A 65 kDa ... 479 e-135
Alignment gi|NP_055040.2| serine/threonine-protein phosphatase 2A 65 kDa ... 441 e-124
Alignment gi|NP_001171033.1| serine/threonine-protein phosphatase 2A 65 k... 414 e-115
Alignment gi|NP_001035847.1| serine/threonine-protein phosphatase 4 regul... 67 4e-11
Alignment gi|NP_005125.1| serine/threonine-protein phosphatase 4 regulato... 67 4e-11
>ref|NP_001171034.1| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform isoform e [Homo sapiens].
Length = 474
Score = 483 bits (1244), Expect = e-136
Identities = 247/251 (98%), Positives = 249/251 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECP+VRLNIISNLDCVNEVIGIR
Sbjct: 224 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIR 283
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 284 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 343
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 344 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 403
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDT+ALQ EVKPVLQKLGQDEDMDVKYF
Sbjct: 404 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYF 463
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 464 AQEAISVLALA 474
Score = 65.9 bits (159), Expect = 9e-11
Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 37/276 (13%)
Frame = +2
Query: 32 IMGLSTI---LGKENTIEHLLPLFLAQLKDE---------------------------CP 121
I LSTI LG E T LLP + DE
Sbjct: 44 IKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLD 103
Query: 122 EVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEF 301
VRL + + +++ L ++P + + AED WRVR + + L +G +
Sbjct: 104 SVRLLAVEACVSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKI 163
Query: 302 FDEKLNSLCMAW---LVDHVYAIREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMAN 460
LN L A+ L D +R AA + + +L + E + N I+P + + +
Sbjct: 164 ---TLNDLIPAFQNLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVS 220
Query: 461 DPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPIL 640
D N + I LS G+E T + +LP+ L D+ +VR N+ +L + ++
Sbjct: 221 DTNQHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVI 280
Query: 641 DTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
L + + P + +L +D V+ E + +LA
Sbjct: 281 GIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLA 316
Score = 55.5 bits (132), Expect = 1e-07
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 4/215 (1%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L + ++R A + + Q + + ++P
Sbjct: 84 QLGNFTGLVGGPDFAHCL-----------LDSVRLLAVEACVSIAQLLSQDDLETLVMPT 132
Query: 443 VLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQ 622
+ A D ++ R + L +A G +IT ++P + D A VR A ++
Sbjct: 133 LRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQNLLKDCEAEVRAAAAHKVK 192
Query: 623 KIG---PILDTDA-LQEEVKPVLQKLGQDEDMDVK 715
++G PI D + + ++ P +++L D + VK
Sbjct: 193 ELGENLPIEDRETIIMNQILPYIKELVSDTNQHVK 227
>ref|NP_002707.3| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform isoform a [Homo sapiens].
Length = 601
Score = 483 bits (1244), Expect = e-136
Identities = 247/251 (98%), Positives = 249/251 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECP+VRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDT+ALQ EVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLALA 754
AQEAISVLALA
Sbjct: 591 AQEAISVLALA 601
Score = 80.1 bits (196), Expect = 4e-15
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 7/254 (2%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF + DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEACVSIAQLLSQDDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 253 ETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKI---TLNDLIPAFQNLLKDCEAE 309
Query: 359 IREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACG 526
+R AA + + +L + E + N I+P + + +D N + I LS G
Sbjct: 310 VRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASVIMGLSTILG 369
Query: 527 QEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDM 706
+E T + +LP+ L D+ +VR N+ +L + ++ L + + P + +L +D
Sbjct: 370 KENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW 429
Query: 707 DVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 430 RVRLAIIEYMPLLA 443
Score = 53.1 bits (126), Expect = 6e-07
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 4/226 (1%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKAVESLRQISQEHTPVALEAYFVPL 143
Query: 443 VLVMANDPNYLHRMTT--LF--CINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVA 610
V +A+ + R + LF C S A EI + + D VR A
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQQ-----FRSLCSDDTPMVRRAAA 198
Query: 611 KSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
L + +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 199 SKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEACVSIA 244
>ref|NP_859051.1| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform isoform c [Homo sapiens].
Length = 603
Score = 479 bits (1233), Expect = e-135
Identities = 244/249 (97%), Positives = 247/249 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECP+VRLNIISNLDCVNEVIGIR
Sbjct: 287 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIR 346
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 347 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 406
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 407 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 466
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDT+ALQ EVKPVLQKLGQDEDMDVKYF
Sbjct: 467 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYF 526
Query: 722 AQEAISVLA 748
AQEAISV+A
Sbjct: 527 AQEAISVVA 535
Score = 80.1 bits (196), Expect = 4e-15
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 7/254 (2%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF + DE VRL + + +++ L
Sbjct: 129 VRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEACVSIAQLLSQDDL 188
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 189 ETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKI---TLNDLIPAFQNLLKDCEAE 245
Query: 359 IREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACG 526
+R AA + + +L + E + N I+P + + +D N + I LS G
Sbjct: 246 VRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASVIMGLSTILG 305
Query: 527 QEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDM 706
+E T + +LP+ L D+ +VR N+ +L + ++ L + + P + +L +D
Sbjct: 306 KENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW 365
Query: 707 DVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 366 RVRLAIIEYMPLLA 379
>ref|NP_859050.1| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform isoform b [Homo sapiens].
Length = 667
Score = 479 bits (1233), Expect = e-135
Identities = 244/249 (97%), Positives = 247/249 (99%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECP+VRLNIISNLDCVNEVIGIR
Sbjct: 351 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIR 410
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 411 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 470
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITT
Sbjct: 471 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITT 530
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDT+ALQ EVKPVLQKLGQDEDMDVKYF
Sbjct: 531 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYF 590
Query: 722 AQEAISVLA 748
AQEAISV+A
Sbjct: 591 AQEAISVVA 599
Score = 80.1 bits (196), Expect = 4e-15
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 7/254 (2%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF + DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEACVSIAQLLSQDDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 253 ETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKI---TLNDLIPAFQNLLKDCEAE 309
Query: 359 IREAATNNLMKLVQKFGTEWAQ----NTIVPKVLVMANDPNYLHRMTTLFCINVLSEACG 526
+R AA + + +L + E + N I+P + + +D N + I LS G
Sbjct: 310 VRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASVIMGLSTILG 369
Query: 527 QEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDM 706
+E T + +LP+ L D+ +VR N+ +L + ++ L + + P + +L +D
Sbjct: 370 KENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW 429
Query: 707 DVKYFAQEAISVLA 748
V+ E + +LA
Sbjct: 430 RVRLAIIEYMPLLA 443
Score = 53.1 bits (126), Expect = 6e-07
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 4/226 (1%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKAVESLRQISQEHTPVALEAYFVPL 143
Query: 443 VLVMANDPNYLHRMTT--LF--CINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVA 610
V +A+ + R + LF C S A EI + + D VR A
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQQ-----FRSLCSDDTPMVRRAAA 198
Query: 611 KSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
L + +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 199 SKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEACVSIA 244
>ref|NP_055040.2| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
alpha isoform [Homo sapiens].
Length = 589
Score = 441 bits (1134), Expect = e-124
Identities = 221/251 (88%), Positives = 235/251 (93%)
Frame = +2
Query: 2 QHVKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 181
QHVKSALASVIMGLS ILGK+NTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR
Sbjct: 339 QHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIR 398
Query: 182 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI
Sbjct: 399 QLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 458
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITT 541
REAAT+NL KLV+KFG EWA TI+PKVL M+ DPNYLHRMTTLFCINVLSE CGQ+ITT
Sbjct: 459 REAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITT 518
Query: 542 KQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYF 721
K MLP VL+MAGD VANVRFNVAKSLQKIGPILD LQ EVKP+L+KL QD+D+DVKYF
Sbjct: 519 KHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYF 578
Query: 722 AQEAISVLALA 754
AQEA++VL+LA
Sbjct: 579 AQEALTVLSLA 589
Score = 79.7 bits (195), Expect = 6e-15
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L +N ++P+F DE VRL + + +++ L
Sbjct: 181 VRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDL 240
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
++P + + AED WRVR + + L +G E L + D +R
Sbjct: 241 EALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRA 300
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVL----VMANDPNYLHRMTTLFCINVLSEACGQEI 535
AA++ + + + + +N I+ ++L + +D N + I LS G++
Sbjct: 301 AASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDN 360
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVK 715
T + +LP+ L D+ VR N+ +L + ++ L + + P + +L +D V+
Sbjct: 361 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR 420
Query: 716 YFAQEAISVLA 748
E + +LA
Sbjct: 421 LAIIEYMPLLA 431
>ref|NP_001171033.1| serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
beta isoform isoform d [Homo sapiens].
Length = 556
Score = 414 bits (1064), Expect = e-115
Identities = 217/249 (87%), Positives = 226/249 (90%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V++A A + L L E+ ++ L +K CP+VRLNIISNLDCVNEVIGIRQL
Sbjct: 310 VRAAAAHKVKELGENLPIEDRETIIMNQILPYIK--CPDVRLNIISNLDCVNEVIGIRQL 367
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 367
SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE
Sbjct: 368 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRE 427
Query: 368 AATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINVLSEACGQEITTKQ 547
AATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCIN LSEACGQEITTKQ
Sbjct: 428 AATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQ 487
Query: 548 MLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQ 727
MLPIVLKMAGDQVANVRFNVAKSLQKIGPILDT+ALQ EVKPVLQKLGQDEDMDVKYFAQ
Sbjct: 488 MLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQ 547
Query: 728 EAISVLALA 754
EAISVLALA
Sbjct: 548 EAISVLALA 556
Score = 62.4 bits (150), Expect = 1e-09
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ A AS + + +L ++ ++PLF + DE VRL + + +++ L
Sbjct: 193 VRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEACVSIAQLLSQDDL 252
Query: 188 SQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAW---LVDHVYA 358
++P + + AED WRVR + + L +G + LN L A+ L D
Sbjct: 253 ETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKI---TLNDLIPAFQNLLKDCEAE 309
Query: 359 IREAATNNLMKLVQKFGTEWAQNTIVPKVLVMANDPNY-LHRMTTLFCINVLSEACGQEI 535
+R AA + + +L + E + I+ ++L P+ L+ ++ L C+N E G
Sbjct: 310 VRAAAAHKVKELGENLPIEDRETIIMNQILPYIKCPDVRLNIISNLDCVN---EVIGIRQ 366
Query: 536 TTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDALQEEV 667
++ +LP ++++A D VR + + + + L + E++
Sbjct: 367 LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKL 410
Score = 53.1 bits (126), Expect = 6e-07
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 4/226 (1%)
Frame = +2
Query: 83 LPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 262
+ + + +L++E ++RLN I L + +G+ + LLP + + D V LA+ E
Sbjct: 25 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDED-EVLLALAE 83
Query: 263 YMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMKLVQKFGTEWAQNTIVPK 442
+ G +G F L +R+ A +L ++ Q+ + VP
Sbjct: 84 QLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKAVESLRQISQEHTPVALEAYFVPL 143
Query: 443 VLVMANDPNYLHRMTT--LF--CINVLSEACGQEITTKQMLPIVLKMAGDQVANVRFNVA 610
V +A+ + R + LF C S A EI + + D VR A
Sbjct: 144 VKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQQ-----FRSLCSDDTPMVRRAAA 198
Query: 611 KSLQKIGPILDTDALQEEVKPVLQKLGQDEDMDVKYFAQEAISVLA 748
L + +L+ D+++ E+ P+ L DE V+ A EA +A
Sbjct: 199 SKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEACVSIA 244
>ref|NP_001035847.1| serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform a
[Homo sapiens].
Length = 950
Score = 67.0 bits (162), Expect = 4e-11
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 15/254 (5%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ LA I L+ ILG + T L+P+F LKD EVR+ ++ +L +++ I +
Sbjct: 679 VRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKD-LDEVRIGVLKHLHDFLKLLHIDKR 737
Query: 188 SQSLLPAIVELAED--AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+ L L D WR R + E + LL + L + + D V ++
Sbjct: 738 REYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSV 797
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMAND----PNYLHRMTTLF-CINVLSEAC- 523
R + + ++V+K V + + + P + R +F C V+ + C
Sbjct: 798 RWISYKLVSEMVKKLHAATPPTFGVDLINELVENFGRCPKWSGRQAFVFVCQTVIEDDCL 857
Query: 524 GQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDAL-------QEEVKPVLQ 682
+ ++P +L +A D+V NVR +AK+L++ +L+ D QE V+ +
Sbjct: 858 PMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQT--LLEKDYFLASASCHQEAVEQTIM 915
Query: 683 KLGQDEDMDVKYFA 724
L D D DVKYFA
Sbjct: 916 ALQMDRDSDVKYFA 929
>ref|NP_005125.1| serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform b
[Homo sapiens].
Length = 933
Score = 67.0 bits (162), Expect = 4e-11
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 15/254 (5%)
Frame = +2
Query: 8 VKSALASVIMGLSTILGKENTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQL 187
V+ LA I L+ ILG + T L+P+F LKD EVR+ ++ +L +++ I +
Sbjct: 662 VRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKD-LDEVRIGVLKHLHDFLKLLHIDKR 720
Query: 188 SQSLLPAIVELAED--AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI 361
+ L L D WR R + E + LL + L + + D V ++
Sbjct: 721 REYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSV 780
Query: 362 REAATNNLMKLVQKFGTEWAQNTIVPKVLVMAND----PNYLHRMTTLF-CINVLSEAC- 523
R + + ++V+K V + + + P + R +F C V+ + C
Sbjct: 781 RWISYKLVSEMVKKLHAATPPTFGVDLINELVENFGRCPKWSGRQAFVFVCQTVIEDDCL 840
Query: 524 GQEITTKQMLPIVLKMAGDQVANVRFNVAKSLQKIGPILDTDAL-------QEEVKPVLQ 682
+ ++P +L +A D+V NVR +AK+L++ +L+ D QE V+ +
Sbjct: 841 PMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQT--LLEKDYFLASASCHQEAVEQTIM 898
Query: 683 KLGQDEDMDVKYFA 724
L D D DVKYFA
Sbjct: 899 ALQMDRDSDVKYFA 912
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 53,391,835
Number of extensions: 1401207
Number of successful extensions: 3810
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 3768
Number of HSP's successfully gapped: 18
Length of query: 458
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 352
Effective length of database: 14,802,980
Effective search space: 5210648960
Effective search space used: 5210648960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008547
(1376 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr09 1072 0.0
Sscrofa_Chr06 155 8e-35
>Sscrofa_Chr09
|| Length = 153670197
Score = 1072 bits (541), Expect = 0.0
Identities = 594/610 (97%), Gaps = 3/610 (0%)
Strand = Plus / Minus
Query: 740 gtgcttgcgttggcataatgaggaacaggcgggaaaagactttactaaattcttatcaca 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44283025 gtgcttgcgttggcataatgaggaacaggcgggaaaagactttactaaattcttatcaca 44282966
Query: 800 gatttctagtcaatgtgttcttaaactgggtggagnnnnnnntggaaaaccttcaagacc 859
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 44282965 gatttctagtcaatgtgttcttaaactgggtggagaaaaaaatggaaaaccttcaagacc 44282906
Query: 860 tcgtctgagcaaatggcaacaacttacaagatcaaatttcagtgacatgattctttctaa 919
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 44282905 tcgtctgagcaaatggcaacaacttacaagatcaaatttcagtgacttgattctttctaa 44282846
Query: 920 agatgaaatgggattgttttttacttgtcttccttgttgggataattatatttaaaccat 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44282845 agatgaaatgggattgttttttacttgtcttccttgttgggataattatatttaaaccat 44282786
Query: 980 tcatattgtttgtgacaaatgcctaacacttggtacagtcatttctcacctgtctcctaa 1039
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44282785 tcttattgtttgtgacaaatgcctaacacttggtacagtcatttctcacctgtctcctaa 44282726
Query: 1040 tgatttatctagcaccatctgggctcctgcagcctcattgtttaatcaggccccggccac 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44282725 tgatttatctagcaccatctgggctcctgcagcctcattgtttaatcaggccccggccac 44282666
Query: 1100 ttaatattcctgaccaagtctggatagatttggacccagatgtggatcggagtgattctc 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44282665 ttaatattcctgaccaagtctggatagatttggacccagatgtggatcggagtgattctc 44282606
Query: 1160 ttgatgtttacatgtatctctgtgtctccatcattccaaagtgaaatgtacatggtttag 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44282605 ttgatgtttacatgtatctctgtgtctccatcattccaaagtgaaatgtacatggtttag 44282546
Query: 1220 aataactgattttggtaacactctacttgggagacacatcgagcgttaactgtagtggaa 1279
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 44282545 aataactgattttgtaaacactctacttgggagacacatcgagcgttaactgtaggggaa 44282486
Query: 1280 gctctttgtccca-gatagtgatggtctgcatc-gtttctcacatgaaagg-aatgtgga 1336
||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 44282485 gctctttgttccaggatagtgatggtctgcatcggtttctcacatgaaaggaaatgtgga 44282426
Query: 1337 agctcagggt 1346
||||||||||
Sbjct: 44282425 agctcagggt 44282416
Score = 343 bits (173), Expect = 2e-91
Identities = 176/177 (99%)
Strand = Plus / Minus
Query: 114 agtgtcctgaagttcgtttgaatatcatctccaatttggattgtgtgaatgaagtgattg 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44292475 agtgtcctgaagttcgtttgaatatcatctccaatttggattgtgtgaatgaagtgattg 44292416
Query: 174 gaatccggcagctctcccagtcactccttcctgccatcgtggagctggctgaagatgcca 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44292415 gaatccggcagctctcccagtcactccttcctgccatcgtggagctggctgaagatgcca 44292356
Query: 234 agtggagggtccggctggccatcattgagtatatgccgctgctggcgggccagctgg 290
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44292355 aatggagggtccggctggccatcattgagtatatgccgctgctggcgggccagctgg 44292299
Score = 313 bits (158), Expect = 1e-82
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 350 gtgtatgccatccgtgaagctgccaccaacaacctcatgaaactagttcagaagtttggt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44285026 gtgtatgccatccgtgaagctgccaccaacaacctcatgaaactagttcagaagtttggt 44284967
Query: 410 acagagtgggcccaaaacaccatcgttcccaaggtgttagtaatggccaatgatcctaat 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44284966 acagagtgggcccaaaacaccatcgttcccaaggtgttagtaatggccaatgatcctaat 44284907
Query: 470 tacttacatagaatgaccactttattctgcattaatgt 507
||||||||||||||||||||||||||||||||||||||
Sbjct: 44284906 tacttacatagaatgaccactttattctgcattaatgt 44284869
Score = 278 bits (140), Expect = 8e-72
Identities = 140/140 (100%)
Strand = Plus / Minus
Query: 506 gtgctgtctgaagcctgtggccaggaaataaccactaagcagatgctgcctattgtattg 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44284501 gtgctgtctgaagcctgtggccaggaaataaccactaagcagatgctgcctattgtattg 44284442
Query: 566 aaaatggccggagaccaagtagcaaatgtccgattcaacgtggccaaatctctacagaaa 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44284441 aaaatggccggagaccaagtagcaaatgtccgattcaacgtggccaaatctctacagaaa 44284382
Query: 626 attggaccaattctagatac 645
||||||||||||||||||||
Sbjct: 44284381 attggaccaattctagatac 44284362
Score = 228 bits (115), Expect = 6e-57
Identities = 115/115 (100%)
Strand = Plus / Minus
Query: 1 tcaacatgtcaaatcggctctagcttctgtaattatgggattgtctaccattttgggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44293469 tcaacatgtcaaatcggctctagcttctgtaattatgggattgtctaccattttgggcaa 44293410
Query: 61 agagaataccattgaacaccttctacctctttttctagctcagttaaaggatgag 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44293409 agagaataccattgaacaccttctacctctttttctagctcagttaaaggatgag 44293355
Score = 182 bits (92), Expect = 3e-43
Identities = 92/92 (100%)
Strand = Plus / Minus
Query: 649 tgctttgcaggaggaagttaagccggtactacagaagctaggccaagatgaagacatgga 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44283513 tgctttgcaggaggaagttaagccggtactacagaagctaggccaagatgaagacatgga 44283454
Query: 709 tgtcaagtactttgcacaggaagctataagtg 740
||||||||||||||||||||||||||||||||
Sbjct: 44283453 tgtcaagtactttgcacaggaagctataagtg 44283422
Score = 115 bits (58), Expect = 7e-23
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 289 gggtgtggagttctttgatgaaaagctgaattctttatgcatggcctggcttgtggacca 348
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 44289516 gggtgtggagttctttgatgaaaagctgaattctttatgtatggcctggcttgtggacca 44289457
Query: 349 tg 350
||
Sbjct: 44289456 tg 44289455
>Sscrofa_Chr06
|| Length = 157765593
Score = 155 bits (78), Expect = 8e-35
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 137 atcatctccaatttggattgtgtgaatgaagtgattggaatccggcagctctcccagtca 196
||||||||||| |||| || || || || |||||||| ||||||||||| ||||||||
Sbjct: 52238168 atcatctccaacctggactgcgtcaacgaggtgattggcatccggcagctgtcccagtcc 52238109
Query: 197 ctccttcctgccatcgtggagctggctgaagatgccaagtggagggtccggctggccatc 256
|| ||||| ||||||||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 52238108 ctgcttcccgccatcgtggagctggccgaggatgccaagtggcgggtccggctggccatc 52238049
Query: 257 attgagtatatgccgctgctggcgggccagctgg 290
|||||||| ||||| |||||||| || |||||||
Sbjct: 52238048 attgagtacatgccactgctggccggacagctgg 52238015
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,380,068
Number of extensions: 252
Number of successful extensions: 252
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 248
Number of HSP's successfully gapped: 8
Length of query: 1376
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1355
Effective length of database: 2,808,413,156
Effective search space: 3805399826380
Effective search space used: 3805399826380
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)