Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008564
(2231 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001096556.1| calpain-2 catalytic subunit precursor [Bos t... 843 0.0
Alignment gi|NP_776684.1| calpain-1 catalytic subunit [Bos taurus]. 538 e-153
Alignment gi|XP_002697306.1| PREDICTED: calpain 1, large subunit-like [Bo... 457 e-128
Alignment gi|XP_606373.4| PREDICTED: calpain 1, large subunit [Bos taurus]. 457 e-128
Alignment gi|NP_776685.1| calpain-3 [Bos taurus]. 438 e-122
Alignment gi|NP_001179626.1| calpain-12 [Bos taurus]. 277 2e-74
Alignment gi|XP_002695020.1| PREDICTED: calpain 12 [Bos taurus]. 277 2e-74
Alignment gi|NP_001179354.1| calpain-14 [Bos taurus]. 264 3e-70
Alignment gi|XP_002691479.1| PREDICTED: calpain 14 [Bos taurus]. 264 3e-70
Alignment gi|NP_776686.1| calpain small subunit 1 [Bos taurus]. 185 1e-46
>ref|NP_001096556.1| calpain-2 catalytic subunit precursor [Bos taurus].
Length = 700
Score = 843 bits (2177), Expect = 0.0
Identities = 409/438 (93%), Positives = 419/438 (95%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRE+LTR+HEDG
Sbjct: 263 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRETLTRQHEDG 322
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF+DFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW
Sbjct: 323 EFWMSFNDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 382
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
MNPQYLIKL SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG
Sbjct: 383 MNPQYLIKLEEEDEDQEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 442
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
QTNIHLSK FFLT RARERSDTFINLREVLNRFKLPPGEYI+VPSTFEPNKDGDFCIRVF
Sbjct: 443 QTNIHLSKKFFLTTRARERSDTFINLREVLNRFKLPPGEYIVVPSTFEPNKDGDFCIRVF 502
Query: 722 SEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 901
SEKKADYQVVDDEIEA+++E D SEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA
Sbjct: 503 SEKKADYQVVDDEIEANIDEIDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 562
Query: 902 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 1081
KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM
Sbjct: 563 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 622
Query: 1082 NSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSE 1261
NSYEMRKALEEAGFK+PCQLHQVIVARFADD LIIDFDNFVRCL+RLETLFRIFKQLD E
Sbjct: 623 NSYEMRKALEEAGFKMPCQLHQVIVARFADDDLIIDFDNFVRCLIRLETLFRIFKQLDPE 682
Query: 1262 NTGTIELDLISWLCFSVL 1315
NTG I+LDLISWL FSVL
Sbjct: 683 NTGMIQLDLISWLSFSVL 700
>ref|NP_776684.1| calpain-1 catalytic subunit [Bos taurus].
Length = 716
Score = 538 bits (1387), Expect = e-153
Identities = 249/438 (56%), Positives = 332/438 (75%), Gaps = 5/438 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGA++V +G + LIR+RNPWGEVEWTG W+D WN VDP +RE L + EDG
Sbjct: 273 AYSVTGAKQVNYQGQMVNLIRMRNPWGEVEWTGAWSDGSSEWNGVDPYMREQLRVKMEDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF DF+R ++RLEICNLTPD L S ++ W T +G WRRGSTAGGCRNYP TFW
Sbjct: 333 EFWMSFRDFMREFTRLEICNLTPDALKSQRFRNWNTTLYEGTWRRGSTAGGCRNYPATFW 392
Query: 362 MNPQYLIKLXXXXXXXXXXX----SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPE 529
+NPQ+ I+L SGC+FL+ L+QKHRRR+R+ G DM TIGF +YEVP
Sbjct: 393 VNPQFKIRLEETDDPDPDDYGGRESGCSFLLALMQKHRRRERRFGRDMETIGFAVYEVPP 452
Query: 530 ELTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFC 709
EL GQ +HL ++FFL++ +R RS+ FINLREV RF+LPPGEY++VPSTFEPNK+GDF
Sbjct: 453 ELMGQPAVHLKRDFFLSNASRARSEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFV 512
Query: 710 IRVFSEKKADYQVVDDEIEADL-EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTIL 886
+R FSEK A Q +DD+++A+L +E SE++ID+ F+ LF QLAGED EIS EL+TIL
Sbjct: 513 LRFFSEKSAGTQELDDQVQANLPDEQVLSEEEIDENFKSLFRQLAGEDMEISVKELRTIL 572
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
R+++K +D+++ GFS+E+C+ MV+++D DG+GKLGL EF ILW +I+ Y I+R+ D+D
Sbjct: 573 NRIISKHKDLRTTGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLD 632
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
+SG+M++YEMR A+E AGFKL +L+++I+ R+++ L +DFDNFV CLVRLET+FR FK
Sbjct: 633 KSGSMSAYEMRMAIEFAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFK 692
Query: 1247 QLDSENTGTIELDLISWL 1300
LD++ G + DL WL
Sbjct: 693 TLDTDLDGVVTFDLFKWL 710
>ref|XP_002697306.1| PREDICTED: calpain 1, large subunit-like [Bos taurus].
Length = 718
Score = 457 bits (1176), Expect = e-128
Identities = 220/435 (50%), Positives = 304/435 (69%), Gaps = 2/435 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG ++V +G + LIR+RNPWG +EW G W+DN W V P+V+ L R EDG
Sbjct: 278 AYSVTGLQDVSYQGRTETLIRVRNPWGRIEWNGAWSDNAKEWEEVAPDVQRQLLHRKEDG 337
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMS+ DFL +++ LEICN+ PDTL+ D W T +G+WRRGSTAGGCR+Y +TFW
Sbjct: 338 EFWMSYQDFLGNFTLLEICNVIPDTLSGDYKSCWHTTFYEGSWRRGSTAGGCRSYLDTFW 397
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
NPQ+ I L + CT LV L+QK+ RR R G + TIGF IY +P+E
Sbjct: 398 TNPQFKICLPEKDDDIEDDEAVCTCLVALMQKNWRRTRPHGAQLETIGFVIYSIPKEFQN 457
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
++HL K+FF+ ++ S+ F N REV ++F+LPPGEYI++PSTFEP+KD DF +RVF
Sbjct: 458 LQDVHLKKDFFVKYQDLGFSEIFTNSREVSSQFQLPPGEYIIIPSTFEPHKDADFLLRVF 517
Query: 722 SEKKADYQVVDDEIEAD-LEENDASEDDIDDGFRRLFAQLA-GEDAEISAFELQTILRRV 895
+EK ++ +D+ A+ L+E SE DID F RLF +A GE EI +ELQ +L +V
Sbjct: 518 TEKHSESWELDEANYAELLQEESISETDIDQDFVRLFHIVAGGEGKEIGMYELQKLLNKV 577
Query: 896 LAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSG 1075
+++ ++ K+ GFS++ C+ MV++LD DGSGKLGL+EF +LW KI+K+ I+RE D D+SG
Sbjct: 578 VSRFKNFKTKGFSLDVCRCMVNLLDKDGSGKLGLREFQVLWRKIKKWTDIFRECDQDQSG 637
Query: 1076 TMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLD 1255
T+NSYEMR A+E+AG KL ++ QV+VAR+A+D LI++FD+F+ C +RL+ +F F +D
Sbjct: 638 TLNSYEMRLAVEKAGIKLNNKVTQVLVARYANDSLIMEFDSFISCFLRLKAMFTYFLTMD 697
Query: 1256 SENTGTIELDLISWL 1300
ENTG I LDL WL
Sbjct: 698 PENTGQISLDLNQWL 712
>ref|XP_606373.4| PREDICTED: calpain 1, large subunit [Bos taurus].
Length = 718
Score = 457 bits (1176), Expect = e-128
Identities = 220/435 (50%), Positives = 304/435 (69%), Gaps = 2/435 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG ++V +G + LIR+RNPWG +EW G W+DN W V P+V+ L R EDG
Sbjct: 278 AYSVTGLQDVSYQGRTETLIRVRNPWGRIEWNGAWSDNAKEWEEVAPDVQRQLLHRKEDG 337
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMS+ DFL +++ LEICN+ PDTL+ D W T +G+WRRGSTAGGCR+Y +TFW
Sbjct: 338 EFWMSYQDFLGNFTLLEICNVIPDTLSGDYKSCWHTTFYEGSWRRGSTAGGCRSYLDTFW 397
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
NPQ+ I L + CT LV L+QK+ RR R G + TIGF IY +P+E
Sbjct: 398 TNPQFKICLPEKDDDIEDDEAVCTCLVALMQKNWRRTRPHGAQLETIGFVIYSIPKEFQN 457
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
++HL K+FF+ ++ S+ F N REV ++F+LPPGEYI++PSTFEP+KD DF +RVF
Sbjct: 458 LQDVHLKKDFFVKYQDLGFSEIFTNSREVSSQFQLPPGEYIIIPSTFEPHKDADFLLRVF 517
Query: 722 SEKKADYQVVDDEIEAD-LEENDASEDDIDDGFRRLFAQLA-GEDAEISAFELQTILRRV 895
+EK ++ +D+ A+ L+E SE DID F RLF +A GE EI +ELQ +L +V
Sbjct: 518 TEKHSESWELDEANYAELLQEESISETDIDQDFVRLFHIVAGGEGKEIGMYELQKLLNKV 577
Query: 896 LAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSG 1075
+++ ++ K+ GFS++ C+ MV++LD DGSGKLGL+EF +LW KI+K+ I+RE D D+SG
Sbjct: 578 VSRFKNFKTKGFSLDVCRCMVNLLDKDGSGKLGLREFQVLWRKIKKWTDIFRECDQDQSG 637
Query: 1076 TMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLD 1255
T+NSYEMR A+E+AG KL ++ QV+VAR+A+D LI++FD+F+ C +RL+ +F F +D
Sbjct: 638 TLNSYEMRLAVEKAGIKLNNKVTQVLVARYANDSLIMEFDSFISCFLRLKAMFTYFLTMD 697
Query: 1256 SENTGTIELDLISWL 1300
ENTG I LDL WL
Sbjct: 698 PENTGQISLDLNQWL 712
>ref|NP_776685.1| calpain-3 [Bos taurus].
Length = 822
Score = 438 bits (1126), Expect = e-122
Identities = 215/482 (44%), Positives = 309/482 (64%), Gaps = 49/482 (10%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D+ +W+ VD + + L + ED
Sbjct: 336 AYSVTGLEEALYKGEKVKLVRLRNPWGQVEWNGSWSDSWKDWSYVDKDEKARLQHQVTED 395
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 396 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTF 455
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 456 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 515
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 516 GNKQ-HLQKDFFLYNASKARSRTYINMREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 574
Query: 719 FSEKKADYQVVDDEIEAD-----------------------------LEE---------- 781
FSEK+ + V++ I D EE
Sbjct: 575 FSEKRNLSEEVENTISVDRPVKKKKNKPIIFVSDRANSNKELGVDQETEEGKDNTSPDKQ 634
Query: 782 ---------NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFS 934
N E + FR +F Q+AG+D EI A EL+ +L RV+ K +D+K+ GF+
Sbjct: 635 AKSPQLEPGNTDQESEEQRQFRNIFRQIAGDDMEICADELKNVLNRVVNKHKDLKTQGFT 694
Query: 935 IETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEE 1114
+E+C+ M+ ++D+DGSG+L L+EF+ LW KI+ +QKI++ D D+SGT+NSYEMR A+++
Sbjct: 695 LESCRSMIALMDTDGSGRLNLQEFHHLWKKIKTWQKIFKHYDTDQSGTINSYEMRNAVKD 754
Query: 1115 AGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLIS 1294
AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F D + G I+L+++
Sbjct: 755 AGFHLNNQLYDIITMRYADKYMNIDFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLE 814
Query: 1295 WL 1300
WL
Sbjct: 815 WL 816
>ref|NP_001179626.1| calpain-12 [Bos taurus].
Length = 721
Score = 277 bits (709), Expect = 2e-74
Identities = 161/456 (35%), Positives = 236/456 (51%), Gaps = 23/456 (5%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG +V + +L+R+RNPWG VEW G W+D+CP W+ + E R++L + EDG
Sbjct: 263 AYSVTGTHKVSLGFTRVRLLRLRNPWGRVEWNGAWSDSCPRWDALPTEWRDALLVKKEDG 322
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTL-TSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
EFWM DF RH+ ++IC+L+P+ L S + W + G W RG +GG + TF
Sbjct: 323 EFWMELLDFFRHFDTIQICSLSPEVLGPSPAGGGWHIHTFQGRWVRGFNSGGSQPGAETF 382
Query: 359 WMNPQYLIKLXXXXXXXXXXXSG--------------------CTFLVGLIQKHRRRQRK 478
W NPQ+ + L CT L+ LIQ+++RR R
Sbjct: 383 WTNPQFRLTLLEPDEEDEEEDGSLGCWGAAGARGPARGARTPKCTVLLSLIQRNQRRLRA 442
Query: 479 MGEDMHTIGFGIYEVPEELTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGE 658
G T+GF ++++PEEL G + S+ L+ R F R+V R +L PG
Sbjct: 443 QGLRYLTVGFHVFQIPEELLGLWDSPRSR-AHLSGLLRADRSPFCARRDVSRRCRLRPGH 501
Query: 659 YILVPSTFEPNKDGDFCIRVFSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQL 838
Y++VPS + DF +RVFSE++ VDD I ADL ++ ++LF +L
Sbjct: 502 YLVVPSAARAGDEADFTLRVFSERRHTAAEVDDVISADLHALMVPYIPLELELQQLFQEL 561
Query: 839 AGEDAEISAFELQTILRRVL--AKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYI 1012
AGE+ E+ A +LQ +L L A+ + TC+ ++ GS L L F
Sbjct: 562 AGEEEELGAPQLQILLSIALEPARAHAQTPREIGLRTCEQLLQCFGHGGS--LDLYHFQQ 619
Query: 1013 LWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDF 1192
LW + ++Q + + D D SGTMNSYE+R AL AGF L QL Q + +R+ D +L +DF
Sbjct: 620 LWGHLLEWQATFDKFDEDASGTMNSYELRLALNAAGFHLNNQLTQALTSRYRDSRLRVDF 679
Query: 1193 DNFVRCLVRLETLFRIFKQLDSENTGTIELDLISWL 1300
+ FV C+ +L +FR Q G + L W+
Sbjct: 680 ERFVSCMAQLICVFRYCSQHLDGGEGVVCLTHRQWM 715
>ref|XP_002695020.1| PREDICTED: calpain 12 [Bos taurus].
Length = 721
Score = 277 bits (709), Expect = 2e-74
Identities = 161/456 (35%), Positives = 236/456 (51%), Gaps = 23/456 (5%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG +V + +L+R+RNPWG VEW G W+D+CP W+ + E R++L + EDG
Sbjct: 263 AYSVTGTHKVSLGFTRVRLLRLRNPWGRVEWNGAWSDSCPRWDALPTEWRDALLVKKEDG 322
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTL-TSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
EFWM DF RH+ ++IC+L+P+ L S + W + G W RG +GG + TF
Sbjct: 323 EFWMELLDFFRHFDTIQICSLSPEVLGPSPAGGGWHIHTFQGRWVRGFNSGGSQPGAETF 382
Query: 359 WMNPQYLIKLXXXXXXXXXXXSG--------------------CTFLVGLIQKHRRRQRK 478
W NPQ+ + L CT L+ LIQ+++RR R
Sbjct: 383 WTNPQFRLTLLEPDEEDEEEDGSLGCWGAAGARGPARGARTPKCTVLLSLIQRNQRRLRA 442
Query: 479 MGEDMHTIGFGIYEVPEELTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGE 658
G T+GF ++++PEEL G + S+ L+ R F R+V R +L PG
Sbjct: 443 QGLRYLTVGFHVFQIPEELLGLWDSPRSR-AHLSGLLRADRSPFCARRDVSRRCRLRPGH 501
Query: 659 YILVPSTFEPNKDGDFCIRVFSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQL 838
Y++VPS + DF +RVFSE++ VDD I ADL ++ ++LF +L
Sbjct: 502 YLVVPSAARAGDEADFTLRVFSERRHTAAEVDDVISADLHALMVPYIPLELELQQLFQEL 561
Query: 839 AGEDAEISAFELQTILRRVL--AKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYI 1012
AGE+ E+ A +LQ +L L A+ + TC+ ++ GS L L F
Sbjct: 562 AGEEEELGAPQLQILLSIALEPARAHAQTPREIGLRTCEQLLQCFGHGGS--LDLYHFQQ 619
Query: 1013 LWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDF 1192
LW + ++Q + + D D SGTMNSYE+R AL AGF L QL Q + +R+ D +L +DF
Sbjct: 620 LWGHLLEWQATFDKFDEDASGTMNSYELRLALNAAGFHLNNQLTQALTSRYRDSRLRVDF 679
Query: 1193 DNFVRCLVRLETLFRIFKQLDSENTGTIELDLISWL 1300
+ FV C+ +L +FR Q G + L W+
Sbjct: 680 ERFVSCMAQLICVFRYCSQHLDGGEGVVCLTHRQWM 715
>ref|NP_001179354.1| calpain-14 [Bos taurus].
Length = 685
Score = 264 bits (674), Expect = 3e-70
Identities = 147/438 (33%), Positives = 238/438 (54%), Gaps = 1/438 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AY++TG +V +R + L+R+RNPWG++EW G W+D+ W+ + P+ + L R+ +DG
Sbjct: 255 AYTLTGLRKVTTRHGPEYLVRLRNPWGKIEWKGDWSDSSSMWDLLSPKEKILLLRKDDDG 314
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYP-NTF 358
EFWMS DF H+ L IC L+P LT + +KW T ++G W G TAGG P +TF
Sbjct: 315 EFWMSLQDFKAHFMLLVICKLSPGLLTQEVGQKWSYTMLEGRWENGRTAGGQMKSPQDTF 374
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQ+L+ + C+ LV L+QK R R R + IGF ++ V +
Sbjct: 375 WKNPQFLLSVWRPQEGKRSQLL-CSVLVSLLQKPRHRHRNWKPHL-AIGFYLFRVNQIFD 432
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
Q L FF + + TF+ +EV L PG Y++VP T E ++ +F +RV
Sbjct: 433 AQKK--LPSEFFWKNASLSCRATFLTEKEVSRELWLEPGTYVIVPCTSEACQESEFVLRV 490
Query: 719 FSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVL 898
FS K Y++ + +E + D+ F +LF + EI+A +LQ IL +
Sbjct: 491 FSRKHIFYEIGSNSRVIFSKEIVDQSEGKDEFFTKLFEKY----PEINAIQLQNILNHMP 546
Query: 899 AKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGT 1078
K FS+E C+ ++ +LD + SG + ++EF LW ++ YQ+++ + D +RSG+
Sbjct: 547 WSGLGSKQPLFSLEACQGILALLDLNASGTVSIQEFRDLWKQLMFYQEVFHKQDTNRSGS 606
Query: 1079 MNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDS 1258
+N ++R A+ EAG L + Q+++ R+ L ++F FVR ++R+E + +F+ L
Sbjct: 607 LNWAQLRAAMREAGIMLSDDVCQLMLIRYGGPDLQMNFVRFVRLMLRVENMEDVFQNLTQ 666
Query: 1259 ENTGTIELDLISWLCFSV 1312
+ G I L WL ++
Sbjct: 667 DGKG-IYLQKPEWLMMAL 683
>ref|XP_002691479.1| PREDICTED: calpain 14 [Bos taurus].
Length = 685
Score = 264 bits (674), Expect = 3e-70
Identities = 147/438 (33%), Positives = 238/438 (54%), Gaps = 1/438 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AY++TG +V +R + L+R+RNPWG++EW G W+D+ W+ + P+ + L R+ +DG
Sbjct: 255 AYTLTGLRKVTTRHGPEYLVRLRNPWGKIEWKGDWSDSSSMWDLLSPKEKILLLRKDDDG 314
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYP-NTF 358
EFWMS DF H+ L IC L+P LT + +KW T ++G W G TAGG P +TF
Sbjct: 315 EFWMSLQDFKAHFMLLVICKLSPGLLTQEVGQKWSYTMLEGRWENGRTAGGQMKSPQDTF 374
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQ+L+ + C+ LV L+QK R R R + IGF ++ V +
Sbjct: 375 WKNPQFLLSVWRPQEGKRSQLL-CSVLVSLLQKPRHRHRNWKPHL-AIGFYLFRVNQIFD 432
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
Q L FF + + TF+ +EV L PG Y++VP T E ++ +F +RV
Sbjct: 433 AQKK--LPSEFFWKNASLSCRATFLTEKEVSRELWLEPGTYVIVPCTSEACQESEFVLRV 490
Query: 719 FSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVL 898
FS K Y++ + +E + D+ F +LF + EI+A +LQ IL +
Sbjct: 491 FSRKHIFYEIGSNSRVIFSKEIVDQSEGKDEFFTKLFEKY----PEINAIQLQNILNHMP 546
Query: 899 AKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGT 1078
K FS+E C+ ++ +LD + SG + ++EF LW ++ YQ+++ + D +RSG+
Sbjct: 547 WSGLGSKQPLFSLEACQGILALLDLNASGTVSIQEFRDLWKQLMFYQEVFHKQDTNRSGS 606
Query: 1079 MNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDS 1258
+N ++R A+ EAG L + Q+++ R+ L ++F FVR ++R+E + +F+ L
Sbjct: 607 LNWAQLRAAMREAGIMLSDDVCQLMLIRYGGPDLQMNFVRFVRLMLRVENMEDVFQNLTQ 666
Query: 1259 ENTGTIELDLISWLCFSV 1312
+ G I L WL ++
Sbjct: 667 DGKG-IYLQKPEWLMMAL 683
>ref|NP_776686.1| calpain small subunit 1 [Bos taurus].
Length = 263
Score = 185 bits (470), Expect = 1e-46
Identities = 91/197 (46%), Positives = 130/197 (65%)
Frame = +2
Query: 710 IRVFSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILR 889
I SE A Y +A+E + FRRLFAQLAG+D E+SA EL IL
Sbjct: 61 ISAISEAAAQYNPEPVPPRTHYSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILN 120
Query: 890 RVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDR 1069
+V+ + D+K+DGF I+TC+ MV ++DSD +GKLG +EF LW I+K+Q +Y++ DVDR
Sbjct: 121 KVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAVYKQFDVDR 180
Query: 1070 SGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQ 1249
SGT+ S E+ A E AGF+L L+ +I+ R++D+ +DFDNF+ CLVRL+ +FR FK
Sbjct: 181 SGTIGSSELPGAFEAAGFRLNEHLYNMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKS 240
Query: 1250 LDSENTGTIELDLISWL 1300
LD + TG I++++ WL
Sbjct: 241 LDKDGTGQIQVNIQEWL 257
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 78,754,492
Number of extensions: 2004182
Number of successful extensions: 6998
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 6920
Number of HSP's successfully gapped: 26
Length of query: 743
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 633
Effective length of database: 14,041,694
Effective search space: 8888392302
Effective search space used: 8888392302
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008564
(2231 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537240.2| PREDICTED: similar to Calpain-2 catalytic subun... 848 0.0
Alignment gi|XP_540866.2| PREDICTED: similar to Calpain-1 catalytic subun... 532 e-151
Alignment gi|XP_859394.1| PREDICTED: similar to calpain 3 isoform c isofo... 453 e-127
Alignment gi|XP_859286.1| PREDICTED: similar to calpain 3 isoform c isofo... 451 e-126
Alignment gi|XP_859246.1| PREDICTED: similar to calpain 3 isoform c isofo... 451 e-126
Alignment gi|XP_544642.2| PREDICTED: similar to Calpain-3 (Calpain L3) (C... 451 e-126
Alignment gi|XP_858907.1| PREDICTED: similar to Calpain-3 (Calpain L3) (C... 439 e-123
Alignment gi|XP_859356.1| PREDICTED: similar to Calpain-3 (Calpain L3) (C... 438 e-122
Alignment gi|XP_859325.1| PREDICTED: similar to Calpain-3 (Calpain L3) (C... 437 e-122
Alignment gi|XP_859205.1| PREDICTED: similar to Calpain-3 (Calpain L3) (C... 436 e-122
>ref|XP_537240.2| PREDICTED: similar to Calpain-2 catalytic subunit (Calpain-2 large
subunit) (Calcium-activated neutral proteinase 2) (CANP
2) (Calpain M-type) (M-calpain) (Millimolar-calpain)
(Calpain large polypeptide L2) [Canis familiaris].
Length = 677
Score = 848 bits (2192), Expect = 0.0
Identities = 410/438 (93%), Positives = 421/438 (96%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGAEEVES GSLQKLIRIRNPWGEVEWTG+WNDNCPNWNTVDPEVRE LTRRHEDG
Sbjct: 240 AYSVTGAEEVESGGSLQKLIRIRNPWGEVEWTGKWNDNCPNWNTVDPEVRERLTRRHEDG 299
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSFSDFLRHYSR+EICNLTPDTLTS+SYKKWKLTKMDG+WRRGSTAGGCRNYPNTFW
Sbjct: 300 EFWMSFSDFLRHYSRVEICNLTPDTLTSESYKKWKLTKMDGSWRRGSTAGGCRNYPNTFW 359
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
MNPQY+IKL GCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEE+TG
Sbjct: 360 MNPQYVIKLEEEDEDQEDGERGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEMTG 419
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
QTNIHLS+NFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFC+RVF
Sbjct: 420 QTNIHLSRNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCVRVF 479
Query: 722 SEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 901
SEKKADYQVVDDEIEADLEE DASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA
Sbjct: 480 SEKKADYQVVDDEIEADLEEIDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 539
Query: 902 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 1081
KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFY+LWTKIQKYQKIYREIDVDRSGTM
Sbjct: 540 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYVLWTKIQKYQKIYREIDVDRSGTM 599
Query: 1082 NSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSE 1261
NSYEMRKALEEAGFKLPCQLHQVIVARFADD+LIIDFDNFVRCLVRLETLFRIFKQLD E
Sbjct: 600 NSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLETLFRIFKQLDPE 659
Query: 1262 NTGTIELDLISWLCFSVL 1315
+GTIELDLISWLCFSVL
Sbjct: 660 GSGTIELDLISWLCFSVL 677
>ref|XP_540866.2| PREDICTED: similar to Calpain-1 catalytic subunit (Calpain-1 large
subunit) (Calcium-activated neutral proteinase 1) (CANP
1) (Calpain mu-type) (muCANP) (Micromolar-calpain)
isoform 1 [Canis familiaris].
Length = 712
Score = 532 bits (1370), Expect = e-151
Identities = 250/437 (57%), Positives = 330/437 (75%), Gaps = 4/437 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGA++V +G + LIR+RNPWGEVEWTG W+D N VDP RE L + EDG
Sbjct: 273 AYSVTGAKQVNYQGQMVSLIRMRNPWGEVEWTGAWSDG---GNNVDPSEREQLRVKMEDG 329
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF DF+R ++RLEICNLTPD L S S +KW T +G WRRGSTAGGCRNYP TFW
Sbjct: 330 EFWMSFRDFMREFTRLEICNLTPDALKSRSIRKWNTTLYEGTWRRGSTAGGCRNYPATFW 389
Query: 362 MNPQYLIKLXXXXXXXXXXX---SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEE 532
+NPQ+ I+L SGC+F++ L+QKHRRR+R+ G DM TIGF +YEVP E
Sbjct: 390 VNPQFKIRLEETDDVDDDYGGRESGCSFVLALMQKHRRRERRFGRDMETIGFAVYEVPPE 449
Query: 533 LTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCI 712
L GQ +HL ++FFL + +R RS+ FINLREV RF+LPPGEY++VPSTFEPNK+GDF +
Sbjct: 450 LVGQPAVHLKRDFFLANSSRARSEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVL 509
Query: 713 RVFSEKKADYQVVDDEIEADL-EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILR 889
R FSEK A + +DD+I+A+L +E SE++ID+ F+ LF QLAGED EIS ELQTIL
Sbjct: 510 RFFSEKSAGTEELDDQIQANLPDEQVLSEEEIDENFKALFRQLAGEDMEISVKELQTILN 569
Query: 890 RVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDR 1069
R+++K +D+++ GFS+E+C+ MV+++D DG+GKLGL EF ILW +I+ Y I+R+ D+D+
Sbjct: 570 RIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDK 629
Query: 1070 SGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQ 1249
SG+M++YEMR A+E AGFKL +L+++I+ R+++ L +DFDNFV CLVRLET+FR FK
Sbjct: 630 SGSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKT 689
Query: 1250 LDSENTGTIELDLISWL 1300
LD++ G + DL WL
Sbjct: 690 LDTDLDGVVTFDLFKWL 706
>ref|XP_859394.1| PREDICTED: similar to calpain 3 isoform c isoform 19 [Canis
familiaris].
Length = 724
Score = 453 bits (1166), Expect = e-127
Identities = 212/434 (48%), Positives = 305/434 (70%), Gaps = 1/434 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + L + ED
Sbjct: 292 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKAEKARLQHQVTED 351
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 352 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQSWTVSVNEGRWVRGCSAGGCRNFPDTF 411
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 412 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 471
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 472 GNKQ-HLQKDFFLYNASKARSKTYINIREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 530
Query: 719 FSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVL 898
FSEK+ + +E+E + + SE+ + FR +F Q+AG+D E+ A EL+ IL V+
Sbjct: 531 FSEKRN----LSEEVENTISVDRPSEEQLQ--FRNIFRQIAGDDMEVCADELKNILNMVV 584
Query: 899 AKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGT 1078
K +D+K+ GF++E+C+ M+ +LD+DGSG+L L+EF+ LW KI+ +QKI++ D D+SGT
Sbjct: 585 NKNKDLKTQGFTLESCRSMIALLDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDQSGT 644
Query: 1079 MNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDS 1258
+NSYEMR A+ +AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F D
Sbjct: 645 INSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFNAFDK 704
Query: 1259 ENTGTIELDLISWL 1300
+ G I+L+++ WL
Sbjct: 705 DGDGIIKLNVLEWL 718
>ref|XP_859286.1| PREDICTED: similar to calpain 3 isoform c isoform 16 [Canis
familiaris].
Length = 729
Score = 451 bits (1161), Expect = e-126
Identities = 213/438 (48%), Positives = 303/438 (69%), Gaps = 5/438 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + L + ED
Sbjct: 287 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKAEKARLQHQVTED 346
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 347 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQSWTVSVNEGRWVRGCSAGGCRNFPDTF 406
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 407 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 466
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 467 GNKQ-HLQKDFFLYNASKARSKTYINIREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 525
Query: 719 FSEKKADYQVVDDEIEADLEE----NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTIL 886
FSEK+ + V++ I D N E + FR +F Q+AG+D E+ A EL+ IL
Sbjct: 526 FSEKRNLSEEVENTISVDRPVPRPGNTDQESEEQLQFRNIFRQIAGDDMEVCADELKNIL 585
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
V+ K +D+K+ GF++E+C+ M+ +LD+DGSG+L L+EF+ LW KI+ +QKI++ D D
Sbjct: 586 NMVVNKNKDLKTQGFTLESCRSMIALLDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTD 645
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
+SGT+NSYEMR A+ +AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F
Sbjct: 646 QSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFN 705
Query: 1247 QLDSENTGTIELDLISWL 1300
D + G I+L+++ WL
Sbjct: 706 AFDKDGDGIIKLNVLEWL 723
>ref|XP_859246.1| PREDICTED: similar to calpain 3 isoform c isoform 15 [Canis
familiaris].
Length = 709
Score = 451 bits (1161), Expect = e-126
Identities = 213/438 (48%), Positives = 303/438 (69%), Gaps = 5/438 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + L + ED
Sbjct: 267 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKAEKARLQHQVTED 326
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 327 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQSWTVSVNEGRWVRGCSAGGCRNFPDTF 386
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 387 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 446
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 447 GNKQ-HLQKDFFLYNASKARSKTYINIREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 505
Query: 719 FSEKKADYQVVDDEIEADLEE----NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTIL 886
FSEK+ + V++ I D N E + FR +F Q+AG+D E+ A EL+ IL
Sbjct: 506 FSEKRNLSEEVENTISVDRPVPRPGNTDQESEEQLQFRNIFRQIAGDDMEVCADELKNIL 565
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
V+ K +D+K+ GF++E+C+ M+ +LD+DGSG+L L+EF+ LW KI+ +QKI++ D D
Sbjct: 566 NMVVNKNKDLKTQGFTLESCRSMIALLDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTD 625
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
+SGT+NSYEMR A+ +AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F
Sbjct: 626 QSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFN 685
Query: 1247 QLDSENTGTIELDLISWL 1300
D + G I+L+++ WL
Sbjct: 686 AFDKDGDGIIKLNVLEWL 703
>ref|XP_544642.2| PREDICTED: similar to Calpain-3 (Calpain L3) (Calpain p94)
(Calcium-activated neutral proteinase 3) (CANP 3)
(Muscle-specific calcium-activated neutral protease 3)
isoform 1 [Canis familiaris].
Length = 757
Score = 451 bits (1161), Expect = e-126
Identities = 213/438 (48%), Positives = 303/438 (69%), Gaps = 5/438 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + L + ED
Sbjct: 315 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKAEKARLQHQVTED 374
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 375 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQSWTVSVNEGRWVRGCSAGGCRNFPDTF 434
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 435 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 494
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 495 GNKQ-HLQKDFFLYNASKARSKTYINIREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 553
Query: 719 FSEKKADYQVVDDEIEADLEE----NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTIL 886
FSEK+ + V++ I D N E + FR +F Q+AG+D E+ A EL+ IL
Sbjct: 554 FSEKRNLSEEVENTISVDRPVPRPGNTDQESEEQLQFRNIFRQIAGDDMEVCADELKNIL 613
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
V+ K +D+K+ GF++E+C+ M+ +LD+DGSG+L L+EF+ LW KI+ +QKI++ D D
Sbjct: 614 NMVVNKNKDLKTQGFTLESCRSMIALLDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTD 673
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
+SGT+NSYEMR A+ +AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F
Sbjct: 674 QSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFN 733
Query: 1247 QLDSENTGTIELDLISWL 1300
D + G I+L+++ WL
Sbjct: 734 AFDKDGDGIIKLNVLEWL 751
>ref|XP_858907.1| PREDICTED: similar to Calpain-3 (Calpain L3) (Calpain p94)
(Calcium-activated neutral proteinase 3) (CANP 3)
(Muscle-specific calcium-activated neutral protease 3)
isoform 7 [Canis familiaris].
Length = 726
Score = 439 bits (1129), Expect = e-123
Identities = 209/439 (47%), Positives = 298/439 (67%), Gaps = 6/439 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + L + ED
Sbjct: 287 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKAEKARLQHQVTED 346
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 347 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQSWTVSVNEGRWVRGCSAGGCRNFPDTF 406
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYE+
Sbjct: 407 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEMHGNKQ 466
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 467 -----HLQKDFFLYNASKARSKTYINIREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 521
Query: 719 FSEKKADYQVVDDEIEADLEE-----NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTI 883
FSEK+ + V++ I D N E + FR +F Q+AG+D E+ A EL+ I
Sbjct: 522 FSEKRNLSEEVENTISVDRPPPPRPGNTDQESEEQLQFRNIFRQIAGDDMEVCADELKNI 581
Query: 884 LRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDV 1063
L V+ K +D+K+ GF++E+C+ M+ +LD+DGSG+L L+EF+ LW KI+ +QKI++ D
Sbjct: 582 LNMVVNKNKDLKTQGFTLESCRSMIALLDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDT 641
Query: 1064 DRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIF 1243
D+SGT+NSYEMR A+ +AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F
Sbjct: 642 DQSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAF 701
Query: 1244 KQLDSENTGTIELDLISWL 1300
D + G I+L+++ WL
Sbjct: 702 NAFDKDGDGIIKLNVLEWL 720
>ref|XP_859356.1| PREDICTED: similar to Calpain-3 (Calpain L3) (Calpain p94)
(Calcium-activated neutral proteinase 3) (CANP 3)
(Muscle-specific calcium-activated neutral protease 3)
isoform 18 [Canis familiaris].
Length = 815
Score = 438 bits (1126), Expect = e-122
Identities = 215/476 (45%), Positives = 306/476 (64%), Gaps = 43/476 (9%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + L + ED
Sbjct: 335 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKAEKARLQHQVTED 394
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 395 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQSWTVSVNEGRWVRGCSAGGCRNFPDTF 454
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 455 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 514
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 515 GNKQ-HLQKDFFLYNASKARSKTYINIREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 573
Query: 719 FSEKKADYQVVDDEIEAD-----------------LEENDASEDDIDD------------ 811
FSEK+ + V++ I D L + SE+ D
Sbjct: 574 FSEKRNLSEEVENTISVDRPVPIIFVSDRANSNKELGVDQESEEGKDKTSPDKPEKSPQP 633
Query: 812 -------------GFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKI 952
FR +F Q+AG+D E+ A EL+ IL V+ K +D+K+ GF++E+C+
Sbjct: 634 RPGNTDQESEEQLQFRNIFRQIAGDDMEVCADELKNILNMVVNKNKDLKTQGFTLESCRS 693
Query: 953 MVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP 1132
M+ +LD+DGSG+L L+EF+ LW KI+ +QKI++ D D+SGT+NSYEMR A+ +AGF L
Sbjct: 694 MIALLDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLN 753
Query: 1133 CQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLISWL 1300
QL+ +I R+AD + IDFD+F+ C VRLE +FR F D + G I+L+++ WL
Sbjct: 754 SQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWL 809
>ref|XP_859325.1| PREDICTED: similar to Calpain-3 (Calpain L3) (Calpain p94)
(Calcium-activated neutral proteinase 3) (CANP 3)
(Muscle-specific calcium-activated neutral protease 3)
isoform 17 [Canis familiaris].
Length = 817
Score = 437 bits (1125), Expect = e-122
Identities = 216/480 (45%), Positives = 307/480 (63%), Gaps = 47/480 (9%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + L + ED
Sbjct: 335 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKAEKARLQHQVTED 394
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 395 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQSWTVSVNEGRWVRGCSAGGCRNFPDTF 454
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 455 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 514
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 515 GNKQ-HLQKDFFLYNASKARSKTYINIREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 573
Query: 719 FSEKKADYQVVDDEIEAD-----------------------------LEE---------- 781
FSEK+ + V++ I D EE
Sbjct: 574 FSEKRNLSEEVENTISVDRPVKKKKAKPIIFVSDRANSNKELGVDQESEEGKDKTSPDKP 633
Query: 782 -------NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIE 940
D SE+ + FR +F Q+AG+D E+ A EL+ IL V+ K +D+K+ GF++E
Sbjct: 634 EKSPQRIKDKSEEQLQ--FRNIFRQIAGDDMEVCADELKNILNMVVNKNKDLKTQGFTLE 691
Query: 941 TCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAG 1120
+C+ M+ +LD+DGSG+L L+EF+ LW KI+ +QKI++ D D+SGT+NSYEMR A+ +AG
Sbjct: 692 SCRSMIALLDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAG 751
Query: 1121 FKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLISWL 1300
F L QL+ +I R+AD + IDFD+F+ C VRLE +FR F D + G I+L+++ WL
Sbjct: 752 FHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWL 811
>ref|XP_859205.1| PREDICTED: similar to Calpain-3 (Calpain L3) (Calpain p94)
(Calcium-activated neutral proteinase 3) (CANP 3)
(Muscle-specific calcium-activated neutral protease 3)
isoform 14 [Canis familiaris].
Length = 778
Score = 436 bits (1122), Expect = e-122
Identities = 216/482 (44%), Positives = 306/482 (63%), Gaps = 49/482 (10%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EEV G KL+R+RNPWG+VEW G W+D +W+ VD + L + ED
Sbjct: 292 AYSVTGLEEVRLAGWAVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKAEKARLQHQVTED 351
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 352 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQSWTVSVNEGRWVRGCSAGGCRNFPDTF 411
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 412 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 471
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 472 GNKQ-HLQKDFFLYNASKARSKTYINIREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 530
Query: 719 FSEKKADYQVVDDEIEAD-----------------------LEENDASEDDIDD------ 811
FSEK+ + V++ I D L + SE+ D
Sbjct: 531 FSEKRNLSEEVENTISVDRPVKKKKAKPIIFVSDRANSNKELGVDQESEEGKDKTSPDKP 590
Query: 812 -------------------GFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFS 934
FR +F Q+AG+D E+ A EL+ IL V+ K +D+K+ GF+
Sbjct: 591 EKSPQPRPGNTDQESEEQLQFRNIFRQIAGDDMEVCADELKNILNMVVNKNKDLKTQGFT 650
Query: 935 IETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEE 1114
+E+C+ M+ +LD+DGSG+L L+EF+ LW KI+ +QKI++ D D+SGT+NSYEMR A+ +
Sbjct: 651 LESCRSMIALLDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDQSGTINSYEMRNAVND 710
Query: 1115 AGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLIS 1294
AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F D + G I+L+++
Sbjct: 711 AGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLE 770
Query: 1295 WL 1300
WL
Sbjct: 771 WL 772
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 82,413,857
Number of extensions: 2083719
Number of successful extensions: 7855
Number of sequences better than 1.0e-05: 42
Number of HSP's gapped: 7694
Number of HSP's successfully gapped: 61
Length of query: 743
Length of database: 18,874,504
Length adjustment: 110
Effective length of query: 633
Effective length of database: 15,207,544
Effective search space: 9626375352
Effective search space used: 9626375352
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008564
(2231 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001093658.1| calpain-2 catalytic subunit [Sus scrofa]. 870 0.0
Alignment gi|NP_999137.1| calpain-1 catalytic subunit [Sus scrofa]. 466 e-131
Alignment gi|NP_999336.1| calpain-3 [Sus scrofa]. 439 e-123
Alignment gi|XP_001927444.1| PREDICTED: calpain-11 [Sus scrofa]. 432 e-121
Alignment gi|XP_001927250.1| PREDICTED: calpain-9 isoform 1 [Sus scrofa]. 419 e-117
Alignment gi|XP_001927273.1| PREDICTED: calpain-9 isoform 2 [Sus scrofa]. 389 e-108
Alignment gi|XP_003125311.2| PREDICTED: calpain-14 [Sus scrofa]. 234 2e-61
Alignment gi|NP_999483.1| calpain small subunit 1 [Sus scrofa]. 185 8e-47
Alignment gi|XP_003127026.1| PREDICTED: calpain small subunit 2-like [Sus... 171 2e-42
Alignment gi|XP_003360939.1| PREDICTED: calpain-14-like, partial [Sus scr... 144 2e-34
>ref|NP_001093658.1| calpain-2 catalytic subunit [Sus scrofa].
Length = 700
Score = 870 bits (2248), Expect = 0.0
Identities = 425/438 (97%), Positives = 425/438 (97%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG
Sbjct: 263 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 322
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW
Sbjct: 323 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 382
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
MNPQYLIKL SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG
Sbjct: 383 MNPQYLIKLEEEDEDQEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 442
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF
Sbjct: 443 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 502
Query: 722 SEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 901
SEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA
Sbjct: 503 SEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 562
Query: 902 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 1081
KRQDIKSDGFSIETCKIMVDMLDSDGS KLGLKEFYILWTKIQKYQKIYREIDVDRSGTM
Sbjct: 563 KRQDIKSDGFSIETCKIMVDMLDSDGSAKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 622
Query: 1082 NSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSE 1261
NSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRI KQLDSE
Sbjct: 623 NSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRISKQLDSE 682
Query: 1262 NTGTIELDLISWLCFSVL 1315
NTGTIELDLISWLCFSVL
Sbjct: 683 NTGTIELDLISWLCFSVL 700
>ref|NP_999137.1| calpain-1 catalytic subunit [Sus scrofa].
Length = 650
Score = 466 bits (1199), Expect = e-131
Identities = 219/377 (58%), Positives = 285/377 (75%), Gaps = 4/377 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGA++V +G + LIR+RNPWGEVEWTG W+D WN VDP R+ L R EDG
Sbjct: 273 AYSVTGAKQVNYQGQMVNLIRMRNPWGEVEWTGAWSDGSSEWNGVDPYQRDQLRVRMEDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF DFLR ++RLEICNLTPD L S + W T +G WRRGSTAGGCRNYP TFW
Sbjct: 333 EFWMSFRDFLREFTRLEICNLTPDALKSQRVRNWNTTLYEGTWRRGSTAGGCRNYPATFW 392
Query: 362 MNPQYLIKL---XXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEE 532
+NPQ+ I+L SGC+F++ L+QKHRRR+R+ G DM TIGF +YEVP E
Sbjct: 393 VNPQFKIRLEETDDPEDDYGGRESGCSFVLALMQKHRRRERRFGRDMETIGFAVYEVPPE 452
Query: 533 LTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCI 712
L GQ +HL ++FFL + +R RS+ FINLREV RF+LPPGEY++VPSTFEPNK+GDF +
Sbjct: 453 LVGQP-VHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVL 511
Query: 713 RVFSEKKADYQVVDDEIEADL-EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILR 889
R FSEKKA Q +DD+++A L +E SE++ID+ F+ LF QLAGED EIS EL+TIL
Sbjct: 512 RFFSEKKAGTQELDDQVQAILPDEQVLSEEEIDENFKALFRQLAGEDMEISVRELRTILN 571
Query: 890 RVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDR 1069
R+++K +D+++ GFS+E+C+ MV+++D DG+GKLGL EF ILW +I+ Y I+R+ D+D+
Sbjct: 572 RIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDK 631
Query: 1070 SGTMNSYEMRKALEEAG 1120
SG+M++YEMR A+E AG
Sbjct: 632 SGSMSAYEMRMAIESAG 648
>ref|NP_999336.1| calpain-3 [Sus scrofa].
Length = 821
Score = 439 bits (1129), Expect = e-123
Identities = 213/482 (44%), Positives = 307/482 (63%), Gaps = 49/482 (10%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D+ +W+ VD + + L + ED
Sbjct: 335 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDSWKDWSFVDKDEKARLQHQVTED 394
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 395 GEFWMSYDDFIYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTF 454
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 455 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 514
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 515 GNKQ-HLQKDFFLYNASKARSRTYINMREVSERFRLPPSEYVIVPSTYEPHQEGEFILRV 573
Query: 719 FSEKKADYQVVDDEIEADL----------------------------------------- 775
FSEK+ + V++ I D
Sbjct: 574 FSEKRNLSEEVENTISVDRPVRKKKTKPIIFVSDRANSNKELGVDQESEEGQDKTSPDKQ 633
Query: 776 -------EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFS 934
N E + FR +F Q+AG+D EI A EL+ +L RV+ K +D+K++GF+
Sbjct: 634 EKSPKPEPSNTDQESEEQQQFRNIFRQIAGDDMEICADELKNVLNRVVNKHKDLKTEGFT 693
Query: 935 IETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEE 1114
+E+C+ M+ ++D+DGSG+L L+EF+ LW KI+ +QKI++ D D+SGT+NSYEMR A+ +
Sbjct: 694 LESCRSMIALMDTDGSGRLNLQEFHHLWKKIKSWQKIFKHYDTDQSGTINSYEMRNAVND 753
Query: 1115 AGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLIS 1294
AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F D + G I+L+++
Sbjct: 754 AGFHLNNQLYDIITMRYADKYMNIDFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLE 813
Query: 1295 WL 1300
WL
Sbjct: 814 WL 815
>ref|XP_001927444.1| PREDICTED: calpain-11 [Sus scrofa].
Length = 713
Score = 432 bits (1112), Expect = e-121
Identities = 213/436 (48%), Positives = 291/436 (66%), Gaps = 3/436 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG +++ G LIR+RNPWG +EW G W+DN W V P+ + + R EDG
Sbjct: 273 AYSVTGLQDIWYHGKTVTLIRVRNPWGRIEWNGAWSDNAKEWEEVSPDFQRQMLHRKEDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMS+ DFL +++ LEICNL PDTL SD W T +G+WRRGSTAGGCR++ +TFW
Sbjct: 333 EFWMSYQDFLDNFTLLEICNLMPDTL-SDYKSCWHTTFYEGSWRRGSTAGGCRSHLDTFW 391
Query: 362 MNPQYLIKLXXXXXXXXXXXSG-CTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
NPQ+ + L CT LV L+QK+ RR R G + TIGF IY +P+E
Sbjct: 392 TNPQFKLSLPEEDDDDPEAEEAVCTCLVALMQKNWRRGRPHGAQLQTIGFVIYTIPKEFQ 451
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
+IHL ++FF ++ S+ F N REV N +LPPGEYI++PSTFEP+KD DF +RV
Sbjct: 452 NLQDIHLKRDFFEKYQDLGFSEIFTNSREVSNHLRLPPGEYIIIPSTFEPHKDADFLLRV 511
Query: 719 FSEKKADYQVVDD-EIEADLEENDASEDDIDDGFRRLFAQLAG-EDAEISAFELQTILRR 892
FSEK ++ +D+ L+E SE++ID F LF +AG ED EI +ELQ +L +
Sbjct: 512 FSEKHSESWELDEANCTQLLQEETISENEIDQNFLHLFQIVAGGEDKEIGVYELQKLLNK 571
Query: 893 VLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRS 1072
V +K + +K+ GFS++ C+ M+++LD D SGKLGL+EF ILW KI+K+ I++E D D S
Sbjct: 572 VASKFRHLKTKGFSLDVCRCMINLLDKDSSGKLGLQEFQILWRKIKKWTDIFQECDQDHS 631
Query: 1073 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQL 1252
GT+NSYEMR A+E AG KL ++ QV+VAR+A+D +I+DFD+F+ C +RL+ +F F +
Sbjct: 632 GTLNSYEMRLAIERAGIKLSNKVTQVLVARYANDDMILDFDSFISCFLRLKAMFTYFLTM 691
Query: 1253 DSENTGTIELDLISWL 1300
D NTG I L+L WL
Sbjct: 692 DPNNTGQICLNLNQWL 707
>ref|XP_001927250.1| PREDICTED: calpain-9 isoform 1 [Sus scrofa].
Length = 690
Score = 419 bits (1077), Expect = e-117
Identities = 204/443 (46%), Positives = 299/443 (67%), Gaps = 6/443 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRH-ED 178
AY+VTG ++V RG +LIR+RNPWG+VEWTG W+D+ W +V P ++ L +D
Sbjct: 255 AYTVTGVDQVNIRGQKVELIRVRNPWGQVEWTGSWSDSSSEWRSVGPAEQKRLCHTALDD 314
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWM+F DF H+ ++E+CNLTPD L D+ KW++T G+W RGSTAGGCRN+ +TF
Sbjct: 315 GEFWMAFRDFRAHFDKVEVCNLTPDALEEDAVHKWEVTVHQGSWVRGSTAGGCRNFLDTF 374
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQ + L CTFLV L+QK RR+ ++ G ++ TIG+ IY+ P
Sbjct: 375 WTNPQIKLSLTEKDEGQEE----CTFLVALMQKDRRKLKRFGANVLTIGYAIYQCP---- 426
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
GQ HL+K+FF H ++ RS TFINLREV +RF+LPPG+YIL+PSTFEP+++ DFC+R+
Sbjct: 427 GQEG-HLNKDFFRYHASQARSKTFINLREVSDRFRLPPGDYILIPSTFEPHQEADFCLRI 485
Query: 719 FSEKKADYQVVDDEIEADLEEND-----ASEDDIDDGFRRLFAQLAGEDAEISAFELQTI 883
FSEKKA + +D ++ DL E E + + F+ LF Q+AGED E++A EL+ +
Sbjct: 486 FSEKKAITRDMDGSVDIDLPEPPKPTAPGQETEEERQFQALFKQVAGEDMEVTAEELKYV 545
Query: 884 LRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDV 1063
L VL K++DIK S+ +CK ++ ++D+ G+GKL EF + W K++K+ ++ + D
Sbjct: 546 LNAVLQKKKDIKFKELSLISCKNIISLMDTSGNGKLEFSEFKVFWDKLKKWMSLFLQFDA 605
Query: 1064 DRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIF 1243
D+SGTM+SYE+R AL+ AGF+L L Q+IV R+AD +L + FD+F+ CLVRLE R+F
Sbjct: 606 DKSGTMSSYELRSALKAAGFQLSSPLLQLIVLRYADPELQLGFDDFLNCLVRLENASRMF 665
Query: 1244 KQLDSENTGTIELDLISWLCFSV 1312
+ L ++N I L++ ++ ++
Sbjct: 666 QALSTKNKEFIHLNINEFIVLTM 688
>ref|XP_001927273.1| PREDICTED: calpain-9 isoform 2 [Sus scrofa].
Length = 664
Score = 389 bits (998), Expect = e-108
Identities = 195/442 (44%), Positives = 285/442 (64%), Gaps = 5/442 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AY+VTG ++V RG +LIR+RNPWG+VEWTG W+D
Sbjct: 255 AYTVTGVDQVNIRGQKVELIRVRNPWGQVEWTGSWSDR---------------------- 292
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
M+F DF H+ ++E+CNLTPD L D+ KW++T G+W RGSTAGGCRN+ +TFW
Sbjct: 293 ---MAFRDFRAHFDKVEVCNLTPDALEEDAVHKWEVTVHQGSWVRGSTAGGCRNFLDTFW 349
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
NPQ + L CTFLV L+QK RR+ ++ G ++ TIG+ IY+ P G
Sbjct: 350 TNPQIKLSLTEKDEGQEE----CTFLVALMQKDRRKLKRFGANVLTIGYAIYQCP----G 401
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
Q HL+K+FF H ++ RS TFINLREV +RF+LPPG+YIL+PSTFEP+++ DFC+R+F
Sbjct: 402 QEG-HLNKDFFRYHASQARSKTFINLREVSDRFRLPPGDYILIPSTFEPHQEADFCLRIF 460
Query: 722 SEKKADYQVVDDEIEADLEEND-----ASEDDIDDGFRRLFAQLAGEDAEISAFELQTIL 886
SEKKA + +D ++ DL E E + + F+ LF Q+AGED E++A EL+ +L
Sbjct: 461 SEKKAITRDMDGSVDIDLPEPPKPTAPGQETEEERQFQALFKQVAGEDMEVTAEELKYVL 520
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
VL K++DIK S+ +CK ++ ++D+ G+GKL EF + W K++K+ ++ + D D
Sbjct: 521 NAVLQKKKDIKFKELSLISCKNIISLMDTSGNGKLEFSEFKVFWDKLKKWMSLFLQFDAD 580
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
+SGTM+SYE+R AL+ AGF+L L Q+IV R+AD +L + FD+F+ CLVRLE R+F+
Sbjct: 581 KSGTMSSYELRSALKAAGFQLSSPLLQLIVLRYADPELQLGFDDFLNCLVRLENASRMFQ 640
Query: 1247 QLDSENTGTIELDLISWLCFSV 1312
L ++N I L++ ++ ++
Sbjct: 641 ALSTKNKEFIHLNINEFIVLTM 662
>ref|XP_003125311.2| PREDICTED: calpain-14 [Sus scrofa].
Length = 641
Score = 234 bits (596), Expect = 2e-61
Identities = 126/374 (33%), Positives = 203/374 (54%), Gaps = 1/374 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AY++TG +V S+ + L+++RNPWG+VEW G W+D+ W + P+ R L R+ DG
Sbjct: 275 AYTLTGIRKVTSKHGPEYLVKLRNPWGKVEWKGDWSDSSSTWELLSPKERILLLRKENDG 334
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYP-NTF 358
EFWM+ DF H++ L IC L+P L+ + + W T ++G W +G+TAGG P + F
Sbjct: 335 EFWMTLRDFKTHFTLLVICKLSPGLLSQEVGQTWLYTMLEGRWEKGTTAGGQMRSPRDMF 394
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQ+L+ + C+ LV L+QK R R R + IGF ++ + +
Sbjct: 395 WKNPQFLLSVWRPQECRRLHMP-CSVLVSLLQKPRHRHRNR-KPYLAIGFYLFRMNQSYD 452
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
Q L FF + +TF+ +EV L PG Y++VP T EP ++ +F +RV
Sbjct: 453 NQR--RLPPEFFRENAPLNWPETFLTEKEVSRELWLEPGTYLIVPCTSEPRQESEFVLRV 510
Query: 719 FSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVL 898
FS Y++ +E + D+ F ++F + EI+A +LQ IL R+
Sbjct: 511 FSRSHVFYEIGSSSSVVFSKEIVDPNEGQDEFFTKVFEKY----PEINAIQLQKILNRMP 566
Query: 899 AKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGT 1078
K FS+E C+ ++ +LD + SG + ++EF LW ++ YQK++ + D RSG+
Sbjct: 567 WSGLGSKPPLFSLEACQGILALLDLNASGTVSIQEFRHLWKQLMFYQKVFHKQDTHRSGS 626
Query: 1079 MNSYEMRKALEEAG 1120
+N +++ A+ EAG
Sbjct: 627 LNWAQLQAAMREAG 640
>ref|NP_999483.1| calpain small subunit 1 [Sus scrofa].
Length = 266
Score = 185 bits (470), Expect = 8e-47
Identities = 92/197 (46%), Positives = 129/197 (65%)
Frame = +2
Query: 710 IRVFSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILR 889
I SE A Y +A+E + FRRLFAQLAG+D E+SA EL IL
Sbjct: 64 ISAISEAAAQYNPEPPPPRTHYSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILN 123
Query: 890 RVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDR 1069
+V+ + D+K+DGF I+TC+ MV ++DSD +GKLG +EF LW I+K+Q IY++ DVDR
Sbjct: 124 KVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQFDVDR 183
Query: 1070 SGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQ 1249
SGT+ S E+ A E AGF L L+ +I+ R++D+ +DFDNF+ CLVRL+ +FR FK
Sbjct: 184 SGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKS 243
Query: 1250 LDSENTGTIELDLISWL 1300
LD + TG I++++ WL
Sbjct: 244 LDKDGTGQIQVNIQEWL 260
>ref|XP_003127026.1| PREDICTED: calpain small subunit 2-like [Sus scrofa].
Length = 246
Score = 171 bits (433), Expect = 2e-42
Identities = 81/172 (47%), Positives = 125/172 (72%)
Frame = +2
Query: 785 DASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDM 964
+A+E D FR+ FAQLAG D E+ A +L IL +VL+K +D+KSDGFS++TC+ +V +
Sbjct: 69 EANESDEVRRFRQQFAQLAGPDMEVGATDLMNILNKVLSKHKDLKSDGFSLDTCRSIVSV 128
Query: 965 LDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLH 1144
+DSD +GKLG +EF LW I+K+Q IY++ D D+SG++ S ++R AL+ AGF+L QL+
Sbjct: 129 MDSDTTGKLGFEEFKYLWNNIKKWQCIYKQYDRDQSGSLGSSQVRGALQAAGFQLNEQLY 188
Query: 1145 QVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLISWL 1300
Q I+ R+A++ +DF++F+ CLVRL+ +FR F+ LD + G I++ + WL
Sbjct: 189 QTIIRRYAEEDGRMDFNSFISCLVRLDAMFRAFRSLDRDADGLIQVYIQEWL 240
>ref|XP_003360939.1| PREDICTED: calpain-14-like, partial [Sus scrofa].
Length = 613
Score = 144 bits (363), Expect = 2e-34
Identities = 71/182 (39%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AY++TG +V S+ + L+++RNPWG+VEW G W+D+ W + P+ R L R+ DG
Sbjct: 327 AYTLTGIRKVTSKHGPEYLVKLRNPWGKVEWKGDWSDSSSTWELLSPKERILLLRKENDG 386
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYP-NTF 358
EFWM+ DF H++ L IC L+P L+ + + W T ++G W +G+TAGG P + F
Sbjct: 387 EFWMTLRDFKTHFTLLVICKLSPGLLSQEVGQTWLYTMLEGRWEKGTTAGGQMRSPRDMF 446
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQK--HRRRQRK----MGEDMHTIGFGIYE 520
W NPQ+L+ + C+ LV L+QK HR R RK +G + +GFG E
Sbjct: 447 WKNPQFLLSVWRPQECRRLHMP-CSVLVSLLQKPRHRHRNRKPYLAIGFYLFRVGFGKSE 505
Query: 521 VP 526
P
Sbjct: 506 AP 507
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 50,649,190
Number of extensions: 1283735
Number of successful extensions: 4779
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 4722
Number of HSP's successfully gapped: 22
Length of query: 743
Length of database: 11,343,932
Length adjustment: 106
Effective length of query: 637
Effective length of database: 8,704,850
Effective search space: 5544989450
Effective search space used: 5544989450
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008564
(2231 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033924.2| calpain-2 catalytic subunit [Mus musculus]. 822 0.0
Alignment gi|NP_001103974.1| calpain-1 catalytic subunit [Mus musculus]. 531 e-151
Alignment gi|NP_031626.1| calpain-1 catalytic subunit [Mus musculus]. 531 e-151
Alignment gi|NP_570960.2| calpain-8 isoform 1 [Mus musculus]. 476 e-134
Alignment gi|NP_001103231.1| calpain-3 isoform b [Mus musculus]. 449 e-126
Alignment gi|NP_001171270.1| calpain-3 isoform c [Mus musculus]. 449 e-126
Alignment gi|NP_031627.2| calpain-3 isoform a [Mus musculus]. 434 e-121
Alignment gi|NP_001013789.1| calpain-11 [Mus musculus]. 429 e-120
Alignment gi|NP_076198.2| calpain-9 [Mus musculus]. 416 e-116
Alignment gi|NP_001104277.1| calpain-12 [Mus musculus]. 271 2e-72
>ref|NP_033924.2| calpain-2 catalytic subunit [Mus musculus].
Length = 700
Score = 822 bits (2123), Expect = 0.0
Identities = 398/438 (90%), Positives = 412/438 (94%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGAEEVES GSLQKLIRIRNPWG+VEWTG+WNDNCP+WNTVDPEVR +LT R EDG
Sbjct: 263 AYSVTGAEEVESSGSLQKLIRIRNPWGQVEWTGKWNDNCPSWNTVDPEVRANLTERQEDG 322
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSFSDFLRHYSRLEICNLTPDTLT DSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW
Sbjct: 323 EFWMSFSDFLRHYSRLEICNLTPDTLTCDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 382
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
MNPQYLIKL GCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG
Sbjct: 383 MNPQYLIKLEEEDEDEEDGERGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 442
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
QTNIHL KNFFLT RARERSDTFINLREVLNRFKLPPGEY+LVPSTFEP+KDGDFCIRVF
Sbjct: 443 QTNIHLGKNFFLTTRARERSDTFINLREVLNRFKLPPGEYVLVPSTFEPHKDGDFCIRVF 502
Query: 722 SEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 901
SEKKADYQ VDDEIEA++EE DA+E+DIDDGFRRLF QLAGEDAEISAFELQTILRRVLA
Sbjct: 503 SEKKADYQAVDDEIEANIEEIDANEEDIDDGFRRLFVQLAGEDAEISAFELQTILRRVLA 562
Query: 902 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 1081
KRQDIKSDGFSIETCKIMVDMLD DGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM
Sbjct: 563 KRQDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 622
Query: 1082 NSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSE 1261
NSYEMRKALEEAGFKLPCQLHQVIVARFADD+LIIDFDNFVRCLVRLETLF+IFKQLD E
Sbjct: 623 NSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLETLFKIFKQLDPE 682
Query: 1262 NTGTIELDLISWLCFSVL 1315
NTGTI+L+L SWL FSVL
Sbjct: 683 NTGTIQLNLASWLSFSVL 700
>ref|NP_001103974.1| calpain-1 catalytic subunit [Mus musculus].
Length = 713
Score = 531 bits (1368), Expect = e-151
Identities = 249/436 (57%), Positives = 332/436 (76%), Gaps = 3/436 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGA++V +G LIR+RNPWGEVEW G W+D+ WN VDP RE L + EDG
Sbjct: 273 AYSVTGAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDSSYEWNKVDPYEREQLRVKMEDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF DF+R +++LEICNLTPD L S + + W T +G WRRGSTAGGCRNYP TFW
Sbjct: 333 EFWMSFRDFIREFTKLEICNLTPDALKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFW 392
Query: 362 MNPQYLIKLXXXXXXXXXXX--SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL 535
+NPQ+ I+L SGC+FL+ L+QKHRRR+R+ G DM TIGF +Y+VP EL
Sbjct: 393 VNPQFKIRLEEVDDADDYDNRESGCSFLLALMQKHRRRERRFGRDMETIGFAVYQVPREL 452
Query: 536 TGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIR 715
GQ +HL ++FFL + +R +S+ FINLREV NR +LPPGEYI+VPSTFEPNK+GDF +R
Sbjct: 453 AGQP-VHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLR 511
Query: 716 VFSEKKADYQVVDDEIEADL-EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRR 892
FSEKKA Q +DD+I+A+L +E SE++IDD F+ LF++LAG+D EIS ELQTIL R
Sbjct: 512 FFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTILNR 571
Query: 893 VLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRS 1072
+++K +D++++GFS+E+C+ MV+++D DG+GKLGL EF ILW +I+ Y I+R+ D+D+S
Sbjct: 572 IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLTIFRKFDLDKS 631
Query: 1073 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQL 1252
G+M++YEMR A+E AGFKL +LH++I+ R+++ L +DFDNFV CLVRLET+FR FK L
Sbjct: 632 GSMSAYEMRMAIEAAGFKLNKKLHELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKLL 691
Query: 1253 DSENTGTIELDLISWL 1300
D++ G + DL WL
Sbjct: 692 DTDLDGVVTFDLFKWL 707
>ref|NP_031626.1| calpain-1 catalytic subunit [Mus musculus].
Length = 713
Score = 531 bits (1368), Expect = e-151
Identities = 249/436 (57%), Positives = 332/436 (76%), Gaps = 3/436 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGA++V +G LIR+RNPWGEVEW G W+D+ WN VDP RE L + EDG
Sbjct: 273 AYSVTGAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDSSYEWNKVDPYEREQLRVKMEDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF DF+R +++LEICNLTPD L S + + W T +G WRRGSTAGGCRNYP TFW
Sbjct: 333 EFWMSFRDFIREFTKLEICNLTPDALKSRTLRNWNTTFYEGTWRRGSTAGGCRNYPATFW 392
Query: 362 MNPQYLIKLXXXXXXXXXXX--SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL 535
+NPQ+ I+L SGC+FL+ L+QKHRRR+R+ G DM TIGF +Y+VP EL
Sbjct: 393 VNPQFKIRLEEVDDADDYDNRESGCSFLLALMQKHRRRERRFGRDMETIGFAVYQVPREL 452
Query: 536 TGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIR 715
GQ +HL ++FFL + +R +S+ FINLREV NR +LPPGEYI+VPSTFEPNK+GDF +R
Sbjct: 453 AGQP-VHLKRDFFLANASRAQSEHFINLREVSNRIRLPPGEYIVVPSTFEPNKEGDFLLR 511
Query: 716 VFSEKKADYQVVDDEIEADL-EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRR 892
FSEKKA Q +DD+I+A+L +E SE++IDD F+ LF++LAG+D EIS ELQTIL R
Sbjct: 512 FFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTILNR 571
Query: 893 VLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRS 1072
+++K +D++++GFS+E+C+ MV+++D DG+GKLGL EF ILW +I+ Y I+R+ D+D+S
Sbjct: 572 IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLTIFRKFDLDKS 631
Query: 1073 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQL 1252
G+M++YEMR A+E AGFKL +LH++I+ R+++ L +DFDNFV CLVRLET+FR FK L
Sbjct: 632 GSMSAYEMRMAIEAAGFKLNKKLHELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKLL 691
Query: 1253 DSENTGTIELDLISWL 1300
D++ G + DL WL
Sbjct: 692 DTDLDGVVTFDLFKWL 707
>ref|NP_570960.2| calpain-8 isoform 1 [Mus musculus].
Length = 703
Score = 476 bits (1225), Expect = e-134
Identities = 226/441 (51%), Positives = 312/441 (70%), Gaps = 3/441 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG EEV+ RG +KLIR+RNPWGEVEWTG W+D+ P WN +DP+ + L +R EDG
Sbjct: 263 AYSVTGVEEVDFRGLPEKLIRLRNPWGEVEWTGAWSDSAPEWNYIDPQKKGELDKRAEDG 322
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSFSDFL+ +SRLEICNL+PD+L+S+ KW L +G W RGSTAGGC+NYP T+W
Sbjct: 323 EFWMSFSDFLKQFSRLEICNLSPDSLSSEEIHKWNLVLFNGRWTRGSTAGGCQNYPATYW 382
Query: 362 MNPQYLIKLXXXXXXXXXXXSG--CTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL 535
NPQ+ I L S CT L+GL+QK+RRRQR++G+ M +IG+ +Y++P+EL
Sbjct: 383 TNPQFKIHLDEVDEDQEEGTSEPCCTVLLGLMQKNRRRQRRIGQGMLSIGYAVYQIPKEL 442
Query: 536 TGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIR 715
T+ HL ++FF + S T++NLREV +R +LPPG+Y++VPSTFEP KDGDFC+R
Sbjct: 443 ENHTDEHLGRDFFQGRQPSTCSSTYMNLREVSSRVQLPPGQYLVVPSTFEPFKDGDFCLR 502
Query: 716 VFSEKKADYQVVDDEIEADLEE-NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRR 892
VFSEKKA + D + D E + D D+ F L + A +D+EISA +L+ +L
Sbjct: 503 VFSEKKAQALEIGDAVAGDPHEPHPRDMDGEDEHFWSLSEEFADKDSEISAHQLKRVLNG 562
Query: 893 VLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRS 1072
+L+KR D+K DGF+I TC+ M+ +LD DG+G L EF LW KI KY +IY+E+D R+
Sbjct: 563 LLSKRTDMKFDGFNINTCREMISLLDGDGTGSLRPVEFKTLWLKICKYLEIYQEMDHSRA 622
Query: 1073 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQL 1252
GT++++EMR AL++AGF L Q+ Q I R+A +L +DFD FV C++RLE LF++F+ L
Sbjct: 623 GTIDAHEMRTALKKAGFTLNNQVQQTIATRYACSKLGVDFDGFVACMIRLEILFKLFRLL 682
Query: 1253 DSENTGTIELDLISWLCFSVL 1315
D + G ++L L WLC +++
Sbjct: 683 DKDQNGIVQLSLAEWLCCALV 703
>ref|NP_001103231.1| calpain-3 isoform b [Mus musculus].
Length = 709
Score = 449 bits (1154), Expect = e-126
Identities = 210/438 (47%), Positives = 302/438 (68%), Gaps = 5/438 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + + L + ED
Sbjct: 267 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKDEKARLQHQVTED 326
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 327 GEFWMSYDDFVYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTF 386
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 387 WTNPQYRLKLLEEDDDPEDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 446
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 447 GNKQ-HLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 505
Query: 719 FSEKKADYQVVDDEIEADLEE----NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTIL 886
FSEK+ + ++ I D + E + FR +F Q+AG+D EI A EL+ +L
Sbjct: 506 FSEKRNLSEEAENTISVDRPVPRPGHTDQESEEQQQFRNIFRQIAGDDMEICADELKNVL 565
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
V+ K +D+K+ GF++E+C+ M+ ++D+DGSG+L L+EF+ LW KI+ +QKI++ D D
Sbjct: 566 NTVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTD 625
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
SGT+NSYEMR A+ +AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F
Sbjct: 626 HSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFN 685
Query: 1247 QLDSENTGTIELDLISWL 1300
D + G I+L+++ WL
Sbjct: 686 AFDKDGDGIIKLNVLEWL 703
>ref|NP_001171270.1| calpain-3 isoform c [Mus musculus].
Length = 729
Score = 449 bits (1154), Expect = e-126
Identities = 210/438 (47%), Positives = 302/438 (68%), Gaps = 5/438 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + + L + ED
Sbjct: 287 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKDEKARLQHQVTED 346
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 347 GEFWMSYDDFVYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTF 406
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 407 WTNPQYRLKLLEEDDDPEDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 466
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 467 GNKQ-HLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 525
Query: 719 FSEKKADYQVVDDEIEADLEE----NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTIL 886
FSEK+ + ++ I D + E + FR +F Q+AG+D EI A EL+ +L
Sbjct: 526 FSEKRNLSEEAENTISVDRPVPRPGHTDQESEEQQQFRNIFRQIAGDDMEICADELKNVL 585
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
V+ K +D+K+ GF++E+C+ M+ ++D+DGSG+L L+EF+ LW KI+ +QKI++ D D
Sbjct: 586 NTVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTD 645
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
SGT+NSYEMR A+ +AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F
Sbjct: 646 HSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFN 705
Query: 1247 QLDSENTGTIELDLISWL 1300
D + G I+L+++ WL
Sbjct: 706 AFDKDGDGIIKLNVLEWL 723
>ref|NP_031627.2| calpain-3 isoform a [Mus musculus].
Length = 821
Score = 434 bits (1116), Expect = e-121
Identities = 212/482 (43%), Positives = 304/482 (63%), Gaps = 49/482 (10%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG EE +G KL+R+RNPWG+VEW G W+D +W+ VD + + L + ED
Sbjct: 335 AYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKDEKARLQHQVTED 394
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 395 GEFWMSYDDFVYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTF 454
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G ++ TIGF IYEVP+E+
Sbjct: 455 WTNPQYRLKLLEEDDDPEDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMH 514
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 515 GNKQ-HLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 573
Query: 719 FSEKK---------------------------ADYQVVDDEIEADLEENDA--------- 790
FSEK+ +D + E+ D E +
Sbjct: 574 FSEKRNLSEEAENTISVDRPVKKKKNKPIIFVSDRANSNKELGVDQEAEEGKDKAGPEKR 633
Query: 791 ------------SEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFS 934
E + FR +F Q+AG+D EI A EL+ +L V+ K +D+K+ GF+
Sbjct: 634 GETPQPRPGHTDQESEEQQQFRNIFRQIAGDDMEICADELKNVLNTVVNKHKDLKTQGFT 693
Query: 935 IETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEE 1114
+E+C+ M+ ++D+DGSG+L L+EF+ LW KI+ +QKI++ D D SGT+NSYEMR A+ +
Sbjct: 694 LESCRSMIALMDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDHSGTINSYEMRNAVND 753
Query: 1115 AGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLIS 1294
AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F D + G I+L+++
Sbjct: 754 AGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLE 813
Query: 1295 WL 1300
WL
Sbjct: 814 WL 815
>ref|NP_001013789.1| calpain-11 [Mus musculus].
Length = 714
Score = 429 bits (1104), Expect = e-120
Identities = 207/438 (47%), Positives = 298/438 (68%), Gaps = 5/438 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AY+VTG E+V R L+ LIRI+NPWG VEW G W+D W V P+VR L + +DG
Sbjct: 273 AYAVTGLEDVYYRDKLETLIRIQNPWGRVEWNGAWSDKATEWEEVSPDVRVQLLHKKDDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYK-KWKLTKMDGNWRRGSTAGGCRNYPNTF 358
+FWMS+ DF+ +++ LEICNLTPD L + YK +W T +G+WRRGSTAGGCRN+P TF
Sbjct: 333 DFWMSYEDFMSNFTLLEICNLTPDALNTWDYKSRWHSTFYEGSWRRGSTAGGCRNHPETF 392
Query: 359 WMNPQYLIKLXXXXXXXXXXXSG---CTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPE 529
W NPQ+ I L CT LV L+QK+ R R+ G + TIGF I+ VP+
Sbjct: 393 WSNPQFKISLPEVDDPEDDSEKNEMVCTCLVALMQKNWRHARE-GPQLLTIGFVIFSVPK 451
Query: 530 ELTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFC 709
E +IHL K+FFL +R S+ FIN REV + +LPPGEY+++PST+EP+KD DF
Sbjct: 452 EFQNLRDIHLKKDFFLKYRDHGFSEIFINSREVNSHLRLPPGEYVIIPSTYEPHKDADFL 511
Query: 710 IRVFSEKKADYQVVDDEIEAD-LEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTIL 886
+RVF+EK ++ ++DD + L+E ++ D+D +LF +A ED E+ + L +L
Sbjct: 512 LRVFTEKHSETWLLDDANRFEHLQEETVTDKDLDKDSLQLFKIMANEDGEVDMYALHKLL 571
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
R+ AK ++ K+ GFS+E C+ M+++LD DGSGKL L EF +LW KI+K+ +I++E D D
Sbjct: 572 NRMTAKLRNFKTKGFSLEVCRRMINLLDKDGSGKLELHEFQVLWKKIKKWTEIFKECDED 631
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
RSG +NSYEMR A+E+AG K+ ++ +V+VAR++D+ +I+DFD+F+ C +RL+ +F F
Sbjct: 632 RSGNLNSYEMRLAIEKAGIKMNNRVTEVVVARYSDN-MIVDFDSFLNCFLRLKAMFAFFL 690
Query: 1247 QLDSENTGTIELDLISWL 1300
+D++ TG+I LD+ WL
Sbjct: 691 SMDTKKTGSICLDINQWL 708
>ref|NP_076198.2| calpain-9 [Mus musculus].
Length = 690
Score = 416 bits (1068), Expect = e-116
Identities = 202/443 (45%), Positives = 297/443 (67%), Gaps = 6/443 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRH-ED 178
AY+VTG ++V G KLIR+RNPWG+VEW G W+D+ P W +VD E ++ L +D
Sbjct: 255 AYTVTGLDQVNFHGQRIKLIRVRNPWGQVEWNGPWSDSSPEWRSVDLEEQKRLGHTALDD 314
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWM+F DF H+ ++EICNLTPD L + +W++T G+W RGSTAGGCRN+ +TF
Sbjct: 315 GEFWMAFKDFKIHFDKVEICNLTPDALEDSALHRWEVTIHQGSWVRGSTAGGCRNFLDTF 374
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQ + L GCTFL L+QK RRR ++ G +M TIG+ IY+ P++
Sbjct: 375 WTNPQIKLSLTERDEGQ----EGCTFLAALMQKDRRRLKRFGANMLTIGYAIYQCPDK-- 428
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
+ HLS++FF H + RS TFINLREV RF+LPPG+YIL+PSTFEP+++ DFC+R+
Sbjct: 429 ---DGHLSRDFFRYHASLARSKTFINLREVSERFQLPPGDYILIPSTFEPHQEADFCLRI 485
Query: 719 FSEKKADYQVVDDEIEADLEE-----NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTI 883
FSEK+A + +D+ I+ DL E E + + FR LF ++AGED E+SA EL+ +
Sbjct: 486 FSEKRAVTRDLDENIDIDLPELPKPTPQEEETEEEQQFRALFQRVAGEDMEVSAEELEYV 545
Query: 884 LRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDV 1063
L VL K+ +K S+ +C+ ++ ++D+ G+GKL +EF + W K++ + ++ + DV
Sbjct: 546 LNAVLQKKTALKFKRLSLLSCRNIISLMDTSGNGKLEFEEFRVFWDKLKHWMDLFLQFDV 605
Query: 1064 DRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIF 1243
D+SGTM+SYE+R AL+ AGF+L L Q+IV R+AD+ L +DFD+++ CLVRLE R+F
Sbjct: 606 DKSGTMSSYELRTALKAAGFQLGGHLLQLIVLRYADEDLQLDFDDYLNCLVRLENASRVF 665
Query: 1244 KQLDSENTGTIELDLISWLCFSV 1312
+ L +N I L++ ++ ++
Sbjct: 666 QSLSVKNKDFIHLNINEFISLTM 688
>ref|NP_001104277.1| calpain-12 [Mus musculus].
Length = 720
Score = 271 bits (693), Expect = 2e-72
Identities = 156/438 (35%), Positives = 233/438 (53%), Gaps = 26/438 (5%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG ++ + +L+R+RNPWG VEW+G W+D+CP W+ + E R++L + EDG
Sbjct: 260 AYSVTGTHKMSLGFTKVRLLRLRNPWGRVEWSGPWSDSCPRWDMLPSEWRDALLVKKEDG 319
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTL-TSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
EFWM DFL H++ ++IC+L+P+ L S + W + G W RG +GG + F
Sbjct: 320 EFWMELQDFLTHFNTVQICSLSPEVLGPSPAGGGWHIHIFQGRWVRGFNSGGSQPSAENF 379
Query: 359 WMNPQYLIKLXXXXXXXXXXXSG----------------------CTFLVGLIQKHRRRQ 472
W NPQ+ + L CT L+ LIQ++RR
Sbjct: 380 WTNPQFRLTLLEPDEEEDDDDEEGPWGGWGAAGARGPARGGRVPKCTVLLSLIQRNRRCL 439
Query: 473 RKMGEDMHTIGFGIYEVPEELTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPP 652
R G T+GF ++++PEEL + S+ +RS F R+V R +LPP
Sbjct: 440 RAKGLTYLTVGFHVFQIPEELLDLWDSPRSRALLPGLLRADRS-VFCARRDVSRRCRLPP 498
Query: 653 GEYILVPSTFEPNKDGDFCIRVFSEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFA 832
G Y++VPS + DF +R+FSE+ +DD I ADL+ A ++ +LF
Sbjct: 499 GHYLVVPSASRVGDEADFTLRIFSERSHTAVEIDDVISADLDALQAPYKPLELELAQLFL 558
Query: 833 QLAGEDAEISAFELQTILRRVL-AKRQDIKSDG-FSIETCKIMVDMLDSDGSG-KLGLKE 1003
+LAGE+ E++A +LQT++ L R + ++ G + TC+ +V G G +L L
Sbjct: 559 ELAGEEEELNALQLQTLISIALEPARANTRTPGEIGLRTCEQLVQCF---GRGQRLSLHH 615
Query: 1004 FYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLI 1183
F LW + +Q + + D D SGTMNS E+R AL AGF L QL Q + +R+ D +L
Sbjct: 616 FQELWGHLMSWQATFDKFDEDASGTMNSCELRLALTAAGFHLNNQLTQSLTSRYRDSRLR 675
Query: 1184 IDFDNFVRCLVRLETLFR 1237
+DF+ FV C RL +FR
Sbjct: 676 VDFERFVCCAARLTCIFR 693
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 68,785,547
Number of extensions: 1735102
Number of successful extensions: 5952
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 5870
Number of HSP's successfully gapped: 27
Length of query: 743
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 634
Effective length of database: 12,343,635
Effective search space: 7825864590
Effective search space used: 7825864590
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008564
(2231 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001739.2| calpain-2 catalytic subunit isoform 1 [Homo sap... 847 0.0
Alignment gi|NP_001139540.1| calpain-2 catalytic subunit isoform 2 [Homo ... 847 0.0
Alignment gi|NP_001185798.1| calpain-1 catalytic subunit [Homo sapiens]. 537 e-152
Alignment gi|NP_001185797.1| calpain-1 catalytic subunit [Homo sapiens]. 537 e-152
Alignment gi|NP_005177.2| calpain-1 catalytic subunit [Homo sapiens]. 537 e-152
Alignment gi|NP_001137434.1| calpain-8 [Homo sapiens]. 486 e-137
Alignment gi|NP_775110.1| calpain-3 isoform c [Homo sapiens]. 452 e-127
Alignment gi|NP_008989.2| calpain-11 [Homo sapiens]. 449 e-126
Alignment gi|NP_077320.1| calpain-3 isoform b [Homo sapiens]. 438 e-122
Alignment gi|NP_000061.1| calpain-3 isoform a [Homo sapiens]. 436 e-122
>ref|NP_001739.2| calpain-2 catalytic subunit isoform 1 [Homo sapiens].
Length = 700
Score = 847 bits (2189), Expect = 0.0
Identities = 411/438 (93%), Positives = 420/438 (95%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGAEEVES GSLQKLIRIRNPWGEVEWTG+WNDNCP+WNT+DPE RE LTRRHEDG
Sbjct: 263 AYSVTGAEEVESNGSLQKLIRIRNPWGEVEWTGRWNDNCPSWNTIDPEERERLTRRHEDG 322
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSFSDFLRHYSRLEICNLTPDTLTSD+YKKWKLTKMDGNWRRGSTAGGCRNYPNTFW
Sbjct: 323 EFWMSFSDFLRHYSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 382
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
MNPQYLIKL SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL+G
Sbjct: 383 MNPQYLIKLEEEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELSG 442
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
QTNIHLSKNFFLT+RARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF
Sbjct: 443 QTNIHLSKNFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 502
Query: 722 SEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 901
SEKKADYQ VDDEIEA+LEE D SEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA
Sbjct: 503 SEKKADYQAVDDEIEANLEEFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 562
Query: 902 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 1081
KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM
Sbjct: 563 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 622
Query: 1082 NSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSE 1261
NSYEMRKALEEAGFK+PCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLF+IFKQLD E
Sbjct: 623 NSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQLDPE 682
Query: 1262 NTGTIELDLISWLCFSVL 1315
NTGTIELDLISWLCFSVL
Sbjct: 683 NTGTIELDLISWLCFSVL 700
>ref|NP_001139540.1| calpain-2 catalytic subunit isoform 2 [Homo sapiens].
Length = 622
Score = 847 bits (2189), Expect = 0.0
Identities = 411/438 (93%), Positives = 420/438 (95%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGAEEVES GSLQKLIRIRNPWGEVEWTG+WNDNCP+WNT+DPE RE LTRRHEDG
Sbjct: 185 AYSVTGAEEVESNGSLQKLIRIRNPWGEVEWTGRWNDNCPSWNTIDPEERERLTRRHEDG 244
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSFSDFLRHYSRLEICNLTPDTLTSD+YKKWKLTKMDGNWRRGSTAGGCRNYPNTFW
Sbjct: 245 EFWMSFSDFLRHYSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 304
Query: 362 MNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELTG 541
MNPQYLIKL SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL+G
Sbjct: 305 MNPQYLIKLEEEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELSG 364
Query: 542 QTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 721
QTNIHLSKNFFLT+RARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF
Sbjct: 365 QTNIHLSKNFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVF 424
Query: 722 SEKKADYQVVDDEIEADLEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 901
SEKKADYQ VDDEIEA+LEE D SEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA
Sbjct: 425 SEKKADYQAVDDEIEANLEEFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLA 484
Query: 902 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 1081
KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM
Sbjct: 485 KRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTM 544
Query: 1082 NSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSE 1261
NSYEMRKALEEAGFK+PCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLF+IFKQLD E
Sbjct: 545 NSYEMRKALEEAGFKMPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFKIFKQLDPE 604
Query: 1262 NTGTIELDLISWLCFSVL 1315
NTGTIELDLISWLCFSVL
Sbjct: 605 NTGTIELDLISWLCFSVL 622
>ref|NP_001185798.1| calpain-1 catalytic subunit [Homo sapiens].
Length = 714
Score = 537 bits (1384), Expect = e-152
Identities = 249/436 (57%), Positives = 331/436 (75%), Gaps = 3/436 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGA++V RG + LIR+RNPWGEVEWTG W+D+ WN VDP R+ L + EDG
Sbjct: 273 AYSVTGAKQVNYRGQVVSLIRMRNPWGEVEWTGAWSDSSSEWNNVDPYERDQLRVKMEDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF DF+R ++RLEICNLTPD L S + +KW T +G WRRGSTAGGCRNYP TFW
Sbjct: 333 EFWMSFRDFMREFTRLEICNLTPDALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFW 392
Query: 362 MNPQYLIKLXXXXXXXXXXX--SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL 535
+NPQ+ I+L SGC+F++ L+QKHRRR+R+ G DM TIGF +YEVP EL
Sbjct: 393 VNPQFKIRLDETDDPDDYGDRESGCSFVLALMQKHRRRERRFGRDMETIGFAVYEVPPEL 452
Query: 536 TGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIR 715
GQ +HL ++FFL + +R RS+ FINLREV RF+LPPGEY++VPSTFEPNK+GDF +R
Sbjct: 453 VGQPAVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLR 512
Query: 716 VFSEKKADYQVVDDEIEADL-EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRR 892
FSEK A +DD+I+A+L +E SE++ID+ F+ LF QLAGED EIS EL+TIL R
Sbjct: 513 FFSEKSAGTVELDDQIQANLPDEQVLSEEEIDENFKALFRQLAGEDMEISVKELRTILNR 572
Query: 893 VLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRS 1072
+++K +D+++ GFS+E+C+ MV+++D DG+GKLGL EF ILW +I+ Y I+R+ D+D+S
Sbjct: 573 IISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKS 632
Query: 1073 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQL 1252
G+M++YEMR A+E AGFKL +L+++I+ R+++ L +DFDNFV CLVRLET+FR FK L
Sbjct: 633 GSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTL 692
Query: 1253 DSENTGTIELDLISWL 1300
D++ G + DL WL
Sbjct: 693 DTDLDGVVTFDLFKWL 708
>ref|NP_001185797.1| calpain-1 catalytic subunit [Homo sapiens].
Length = 714
Score = 537 bits (1384), Expect = e-152
Identities = 249/436 (57%), Positives = 331/436 (75%), Gaps = 3/436 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGA++V RG + LIR+RNPWGEVEWTG W+D+ WN VDP R+ L + EDG
Sbjct: 273 AYSVTGAKQVNYRGQVVSLIRMRNPWGEVEWTGAWSDSSSEWNNVDPYERDQLRVKMEDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF DF+R ++RLEICNLTPD L S + +KW T +G WRRGSTAGGCRNYP TFW
Sbjct: 333 EFWMSFRDFMREFTRLEICNLTPDALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFW 392
Query: 362 MNPQYLIKLXXXXXXXXXXX--SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL 535
+NPQ+ I+L SGC+F++ L+QKHRRR+R+ G DM TIGF +YEVP EL
Sbjct: 393 VNPQFKIRLDETDDPDDYGDRESGCSFVLALMQKHRRRERRFGRDMETIGFAVYEVPPEL 452
Query: 536 TGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIR 715
GQ +HL ++FFL + +R RS+ FINLREV RF+LPPGEY++VPSTFEPNK+GDF +R
Sbjct: 453 VGQPAVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLR 512
Query: 716 VFSEKKADYQVVDDEIEADL-EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRR 892
FSEK A +DD+I+A+L +E SE++ID+ F+ LF QLAGED EIS EL+TIL R
Sbjct: 513 FFSEKSAGTVELDDQIQANLPDEQVLSEEEIDENFKALFRQLAGEDMEISVKELRTILNR 572
Query: 893 VLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRS 1072
+++K +D+++ GFS+E+C+ MV+++D DG+GKLGL EF ILW +I+ Y I+R+ D+D+S
Sbjct: 573 IISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKS 632
Query: 1073 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQL 1252
G+M++YEMR A+E AGFKL +L+++I+ R+++ L +DFDNFV CLVRLET+FR FK L
Sbjct: 633 GSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTL 692
Query: 1253 DSENTGTIELDLISWL 1300
D++ G + DL WL
Sbjct: 693 DTDLDGVVTFDLFKWL 708
>ref|NP_005177.2| calpain-1 catalytic subunit [Homo sapiens].
Length = 714
Score = 537 bits (1384), Expect = e-152
Identities = 249/436 (57%), Positives = 331/436 (75%), Gaps = 3/436 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTGA++V RG + LIR+RNPWGEVEWTG W+D+ WN VDP R+ L + EDG
Sbjct: 273 AYSVTGAKQVNYRGQVVSLIRMRNPWGEVEWTGAWSDSSSEWNNVDPYERDQLRVKMEDG 332
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMSF DF+R ++RLEICNLTPD L S + +KW T +G WRRGSTAGGCRNYP TFW
Sbjct: 333 EFWMSFRDFMREFTRLEICNLTPDALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFW 392
Query: 362 MNPQYLIKLXXXXXXXXXXX--SGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL 535
+NPQ+ I+L SGC+F++ L+QKHRRR+R+ G DM TIGF +YEVP EL
Sbjct: 393 VNPQFKIRLDETDDPDDYGDRESGCSFVLALMQKHRRRERRFGRDMETIGFAVYEVPPEL 452
Query: 536 TGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIR 715
GQ +HL ++FFL + +R RS+ FINLREV RF+LPPGEY++VPSTFEPNK+GDF +R
Sbjct: 453 VGQPAVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLR 512
Query: 716 VFSEKKADYQVVDDEIEADL-EENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRR 892
FSEK A +DD+I+A+L +E SE++ID+ F+ LF QLAGED EIS EL+TIL R
Sbjct: 513 FFSEKSAGTVELDDQIQANLPDEQVLSEEEIDENFKALFRQLAGEDMEISVKELRTILNR 572
Query: 893 VLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRS 1072
+++K +D+++ GFS+E+C+ MV+++D DG+GKLGL EF ILW +I+ Y I+R+ D+D+S
Sbjct: 573 IISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKS 632
Query: 1073 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQL 1252
G+M++YEMR A+E AGFKL +L+++I+ R+++ L +DFDNFV CLVRLET+FR FK L
Sbjct: 633 GSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTL 692
Query: 1253 DSENTGTIELDLISWL 1300
D++ G + DL WL
Sbjct: 693 DTDLDGVVTFDLFKWL 708
>ref|NP_001137434.1| calpain-8 [Homo sapiens].
Length = 703
Score = 486 bits (1251), Expect = e-137
Identities = 230/437 (52%), Positives = 313/437 (71%), Gaps = 3/437 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG EEV +G +KLIR+RNPWGEVEW+G W+D+ P WN +DP +E L ++ EDG
Sbjct: 263 AYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDG 322
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMS SDF+R +SRLEICNL+PD+L+S+ KW L +G+W RGSTAGGC+NYP T+W
Sbjct: 323 EFWMSLSDFVRQFSRLEICNLSPDSLSSEEVHKWNLVLFNGHWTRGSTAGGCQNYPATYW 382
Query: 362 MNPQYLIKLXXXXXXXXXXXSG--CTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEEL 535
NPQ+ I+L CT L+GL+QK+RR ++++G+ M +IG+ +Y+VP+EL
Sbjct: 383 TNPQFKIRLDEVDEDQEESIGEPCCTVLLGLMQKNRRWRKRIGQGMLSIGYAVYQVPKEL 442
Query: 536 TGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIR 715
T+ HL ++FFL ++ R+ T++NLREV R +LPPGEY++VPSTFEP KDG+FC+R
Sbjct: 443 ESHTDAHLGRDFFLAYQPSARTSTYVNLREVSGRARLPPGEYLVVPSTFEPFKDGEFCLR 502
Query: 716 VFSEKKADYQVVDDEIEADLEENDASE-DDIDDGFRRLFAQLAGEDAEISAFELQTILRR 892
VFSEKKA + D + + E SE D DD FRRLF +LAG+D+EI+A L+ +L
Sbjct: 503 VFSEKKAQALEIGDVVAGNPYEPHPSEVDQEDDQFRRLFEKLAGKDSEITANALKILLNE 562
Query: 893 VLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRS 1072
+KR DIK DGF+I TC+ M+ +LDS+G+G LG EF LW KIQKY +IY E D + S
Sbjct: 563 AFSKRTDIKFDGFNINTCREMISLLDSNGTGTLGAVEFKTLWLKIQKYLEIYWETDYNHS 622
Query: 1073 GTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQL 1252
GT++++EMR AL +AGF L Q+ Q I R+A +L I+FD+FV C++RLETLF++F L
Sbjct: 623 GTIDAHEMRTALRKAGFTLNSQVQQTIALRYACSKLGINFDSFVACMIRLETLFKLFSLL 682
Query: 1253 DSENTGTIELDLISWLC 1303
D + G ++L L WLC
Sbjct: 683 DEDKDGMVQLSLAEWLC 699
>ref|NP_775110.1| calpain-3 isoform c [Homo sapiens].
Length = 729
Score = 452 bits (1163), Expect = e-127
Identities = 212/438 (48%), Positives = 309/438 (70%), Gaps = 5/438 (1%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG +EV +G KL+R+RNPWG+VEW G W+D +W+ VD + + L + ED
Sbjct: 287 AYSVTGLDEVPFKGEKVKLVRLRNPWGQVEWNGSWSDRWKDWSFVDKDEKARLQHQVTED 346
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 347 GEFWMSYEDFIYHFTKLEICNLTADALQSDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTF 406
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G + TIGF IYEVP+E+
Sbjct: 407 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGASLFTIGFAIYEVPKEMH 466
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 467 GNKQ-HLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 525
Query: 719 FSEKKADYQVVDDEIEAD--LEENDASEDDIDDG--FRRLFAQLAGEDAEISAFELQTIL 886
FSEK+ + V++ I D + + +S+ + ++ FR +F Q+AG+D EI A EL+ +L
Sbjct: 526 FSEKRNLSEEVENTISVDRPVPQPGSSDQESEEQQQFRNIFKQIAGDDMEICADELKKVL 585
Query: 887 RRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVD 1066
V+ K +D+K+ GF++E+C+ M+ ++D+DGSGKL L+EF+ LW KI+ +QKI++ D D
Sbjct: 586 NTVVNKHKDLKTHGFTLESCRSMIALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKHYDTD 645
Query: 1067 RSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFK 1246
+SGT+NSYEMR A+ +AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F
Sbjct: 646 QSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFH 705
Query: 1247 QLDSENTGTIELDLISWL 1300
D + G I+L+++ WL
Sbjct: 706 AFDKDGDGIIKLNVLEWL 723
>ref|NP_008989.2| calpain-11 [Homo sapiens].
Length = 739
Score = 449 bits (1156), Expect = e-126
Identities = 214/437 (48%), Positives = 294/437 (67%), Gaps = 4/437 (0%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRRHEDG 181
AYSVTG ++V RG ++ LIR+RNPWG +EW G W+D+ W V +++ L + EDG
Sbjct: 297 AYSVTGLQDVHYRGKMETLIRVRNPWGRIEWNGAWSDSAREWEEVASDIQMQLLHKTEDG 356
Query: 182 EFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTFW 361
EFWMS+ DFL +++ LEICNLTPDTL+ D W T +G+WRRGS+AGGCRN+P TFW
Sbjct: 357 EFWMSYQDFLNNFTLLEICNLTPDTLSGDYKSYWHTTFYEGSWRRGSSAGGCRNHPGTFW 416
Query: 362 MNPQYLIKLXXXXXXXXXXXSG---CTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEE 532
NPQ+ I L CT LV L+QK+ R R+ G + TIGF +Y VP+E
Sbjct: 417 TNPQFKISLPEGDDPEDDAEGNVVVCTCLVALMQKNWRHARQQGAQLQTIGFVLYAVPKE 476
Query: 533 LTGQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCI 712
++HL K FF ++ S+ F N REV ++ +LPPGEYI++PSTFEP++D DF +
Sbjct: 477 FQNIQDVHLKKEFFTKYQDHGFSEIFTNSREVSSQLRLPPGEYIIIPSTFEPHRDADFLL 536
Query: 713 RVFSEKKADYQVVDDEIEAD-LEENDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILR 889
RVF+EK ++ +D+ A+ L+E SEDD+D F LF +AGE EI +ELQ +L
Sbjct: 537 RVFTEKHSESWELDEVNYAEQLQEEKVSEDDMDQDFLHLFKIVAGEGKEIGVYELQRLLN 596
Query: 890 RVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDR 1069
R+ K + K+ GF ++ C+ M++++D DGSGKLGL EF ILW K++K+ I+RE D D
Sbjct: 597 RMAIKFKSFKTKGFGLDACRCMINLMDKDGSGKLGLLEFKILWKKLKKWMDIFRECDQDH 656
Query: 1070 SGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQ 1249
SGT+NSYEMR +E+AG KL ++ QV+VAR+ADD LIIDFD+F+ C +RL+T+F F
Sbjct: 657 SGTLNSYEMRLVIEKAGIKLNNKVMQVLVARYADDDLIIDFDSFISCFLRLKTMFTFFLT 716
Query: 1250 LDSENTGTIELDLISWL 1300
+D +NTG I L L WL
Sbjct: 717 MDPKNTGHICLSLEQWL 733
>ref|NP_077320.1| calpain-3 isoform b [Homo sapiens].
Length = 815
Score = 438 bits (1126), Expect = e-122
Identities = 214/476 (44%), Positives = 306/476 (64%), Gaps = 43/476 (9%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG +EV +G KL+R+RNPWG+VEW G W+D +W+ VD + + L + ED
Sbjct: 335 AYSVTGLDEVPFKGEKVKLVRLRNPWGQVEWNGSWSDRWKDWSFVDKDEKARLQHQVTED 394
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 395 GEFWMSYEDFIYHFTKLEICNLTADALQSDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTF 454
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G + TIGF IYEVP+E+
Sbjct: 455 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGASLFTIGFAIYEVPKEMH 514
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 515 GNKQ-HLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 573
Query: 719 FSEKKADYQVVDDEIEAD-----------------------LEE---------------- 781
FSEK+ + V++ I D EE
Sbjct: 574 FSEKRNLSEEVENTISVDRPVPIIFVSDRANSNKELGVDQESEEGKGKTSPDKQKQSPQP 633
Query: 782 ---NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKI 952
+ E + FR +F Q+AG+D EI A EL+ +L V+ K +D+K+ GF++E+C+
Sbjct: 634 QPGSSDQESEEQQQFRNIFKQIAGDDMEICADELKKVLNTVVNKHKDLKTHGFTLESCRS 693
Query: 953 MVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP 1132
M+ ++D+DGSGKL L+EF+ LW KI+ +QKI++ D D+SGT+NSYEMR A+ +AGF L
Sbjct: 694 MIALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLN 753
Query: 1133 CQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLISWL 1300
QL+ +I R+AD + IDFD+F+ C VRLE +FR F D + G I+L+++ WL
Sbjct: 754 NQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWL 809
>ref|NP_000061.1| calpain-3 isoform a [Homo sapiens].
Length = 821
Score = 436 bits (1120), Expect = e-122
Identities = 214/482 (44%), Positives = 306/482 (63%), Gaps = 49/482 (10%)
Frame = +2
Query: 2 AYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDNCPNWNTVDPEVRESLTRR-HED 178
AYSVTG +EV +G KL+R+RNPWG+VEW G W+D +W+ VD + + L + ED
Sbjct: 335 AYSVTGLDEVPFKGEKVKLVRLRNPWGQVEWNGSWSDRWKDWSFVDKDEKARLQHQVTED 394
Query: 179 GEFWMSFSDFLRHYSRLEICNLTPDTLTSDSYKKWKLTKMDGNWRRGSTAGGCRNYPNTF 358
GEFWMS+ DF+ H+++LEICNLT D L SD + W ++ +G W RG +AGGCRN+P+TF
Sbjct: 395 GEFWMSYEDFIYHFTKLEICNLTADALQSDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTF 454
Query: 359 WMNPQYLIKLXXXXXXXXXXXSGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELT 538
W NPQY +KL C+FLV L+QK+RR+ RK+G + TIGF IYEVP+E+
Sbjct: 455 WTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGASLFTIGFAIYEVPKEMH 514
Query: 539 GQTNIHLSKNFFLTHRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 718
G HL K+FFL + ++ RS T+IN+REV RF+LPP EY++VPST+EP+++G+F +RV
Sbjct: 515 GNKQ-HLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 573
Query: 719 FSEKKADYQVVDDEIEAD-----------------------------LEE---------- 781
FSEK+ + V++ I D EE
Sbjct: 574 FSEKRNLSEEVENTISVDRPVKKKKTKPIIFVSDRANSNKELGVDQESEEGKGKTSPDKQ 633
Query: 782 ---------NDASEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFS 934
+ E + FR +F Q+AG+D EI A EL+ +L V+ K +D+K+ GF+
Sbjct: 634 KQSPQPQPGSSDQESEEQQQFRNIFKQIAGDDMEICADELKKVLNTVVNKHKDLKTHGFT 693
Query: 935 IETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEE 1114
+E+C+ M+ ++D+DGSGKL L+EF+ LW KI+ +QKI++ D D+SGT+NSYEMR A+ +
Sbjct: 694 LESCRSMIALMDTDGSGKLNLQEFHHLWNKIKAWQKIFKHYDTDQSGTINSYEMRNAVND 753
Query: 1115 AGFKLPCQLHQVIVARFADDQLIIDFDNFVRCLVRLETLFRIFKQLDSENTGTIELDLIS 1294
AGF L QL+ +I R+AD + IDFD+F+ C VRLE +FR F D + G I+L+++
Sbjct: 754 AGFHLNNQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLE 813
Query: 1295 WL 1300
WL
Sbjct: 814 WL 815
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 80,910,178
Number of extensions: 2048289
Number of successful extensions: 6968
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 6865
Number of HSP's successfully gapped: 35
Length of query: 743
Length of database: 18,297,164
Length adjustment: 110
Effective length of query: 633
Effective length of database: 14,671,124
Effective search space: 9286821492
Effective search space used: 9286821492
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008564
(2231 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL894320.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 1390 0.0
Sscrofa_Chr02 68 2e-08
>gb|GL894320.1| Sus scrofa unplaced genomic scaffold chrU_scaffold2998
Length = 39799
Score = 1390 bits (701), Expect = 0.0
Identities = 707/709 (99%)
Strand = Plus / Plus
Query: 1400 ggatcatgaaatgatgggaacattcacttaaaccgattagcgctgaaaatgatactgtct 1459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38540 ggatcatgaaatgatgggaacattcacttaaaccgattagcgctgaaaatgatactgtct 38599
Query: 1460 atgtgagaacgcagacctcctagatatcaaagtaaaagatttgcatatcacactaaatgc 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38600 atgtgagaacgcagacctcctagatatcaaagtaaaagatttgcatatcacactaaatgc 38659
Query: 1520 aatgagttgattagttaacctcaatcaaattagggaaaacctttggtctggacatagcac 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38660 aatgagttgattagttaacctcaatcaaattagggaaaacctttggtctggacatagcac 38719
Query: 1580 acactttgtactttgagacactttcctgttcatcgcaatatcacatcaggaagaaaggca 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38720 acactttgtactttgagacactttcctgttcatcgcaatatcacatcaggaagaaaggca 38779
Query: 1640 gcgagatacttagcagccgagcttactgtaacatgcagtcgatctcaaaggatccggggt 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38780 gcgagatacttagcagccgagcttactgtaacatgcagtcgatctcaaaggatccggggt 38839
Query: 1700 ccctgctggcaatatttaaagctacttcacgtttaaaaatgcagctgtggcgcccaccca 1759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38840 ccctgctggcaatatttaaagctacttcacgtttaaaaatgcagctgtggcgcccaccca 38899
Query: 1760 acagcggtgcagggatgaccatttcctttgagtaagatggaaaaatattttgcatcgcga 1819
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 38900 acagcggtgcagggatgaccatttcctttgagtaagatggaaaaatattttgcatcgcaa 38959
Query: 1820 aggcatcggaagacaccaggtaggaagcacagctctgtcatttgcgttacatgagagaca 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38960 aggcatcggaagacaccaggtaggaagcacagctctgtcatttgcgttacatgagagaca 39019
Query: 1880 gactatagaaaacggcttggtgaacagtgacgtgttcataagcccttgagcatatccagt 1939
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 39020 gactatagaaaacggcttggtgaatagtgacgtgttcataagcccttgagcatatccagt 39079
Query: 1940 cgtagacattgtcatgaagaccgaagggattcactctcgctcagctgaagccgtgaccca 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39080 cgtagacattgtcatgaagaccgaagggattcactctcgctcagctgaagccgtgaccca 39139
Query: 2000 gcaagcccactgcgatggaagacagcacagctgcctccaaacttcctgaatgtcaccgca 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39140 gcaagcccactgcgatggaagacagcacagctgcctccaaacttcctgaatgtcaccgca 39199
Query: 2060 agcatcaagcatcgcgcgtggatggggtggggggacgccctgcggaagc 2108
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39200 agcatcaagcatcgcgcgtggatggggtggggggacgccctgcggaagc 39248
Score = 424 bits (214), Expect = e-116
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 531 agttgaccggacagaccaacatccacctcagcaagaacttcttcctgacgcacagagcga 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24944 agttgaccggacagaccaacatccacctcagcaagaacttcttcctgacgcacagagcga 25003
Query: 591 gggagcggtcggacaccttcatcaacctgcgggaagtgctgaaccgcttcaagctgccgc 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25004 gggagcggtcggacaccttcatcaacctgcgggaagtgctgaaccgcttcaagctgccgc 25063
Query: 651 cgggcgagtacatcctggtgccctccaccttcgagcccaacaaggacggggacttctgca 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25064 cgggcgagtacatcctggtgccctccaccttcgagcccaacaaggacggggacttctgca 25123
Query: 711 tccgcgtcttttccgaaaagaaggccgactacca 744
||||||||||||||||||||||||||||||||||
Sbjct: 25124 tccgcgtcttttccgaaaagaaggccgactacca 25157
Score = 264 bits (133), Expect = 2e-67
Identities = 139/141 (98%)
Strand = Plus / Plus
Query: 189 ggatgtctttcagcgacttcctgaggcactattcgcgtttggagatctgcaacctgaccc 248
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 20488 ggatgtctttcagcgacttcctgaggcactattcgcgcttggagatctgcaacctgaccc 20547
Query: 249 ccgacacactcaccagtgactcgtacaagaagtggaaactcaccaagatggacgggaact 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20548 ccgacacactcaccagtgactcgtacaagaagtggaaactcaccaagatggacgggaact 20607
Query: 309 ggcggcggggctccaccgcgg 329
||||| |||||||||||||||
Sbjct: 20608 ggcggaggggctccaccgcgg 20628
Score = 242 bits (122), Expect = 7e-61
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1115 gcaggtttcaagctgccctgtcagctccaccaagtcatcgtcgctcggtttgcagatgac 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35575 gcaggtttcaagctgccctgtcagctccaccaagtcatcgtcgctcggtttgcagatgac 35634
Query: 1175 cagctcatcatcgattttgacaattttgttcggtgtttggttcgactagaaacactattc 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35635 cagctcatcatcgattttgacaattttgttcggtgtttggttcgactagaaacactattc 35694
Query: 1235 ag 1236
||
Sbjct: 35695 ag 35696
Score = 182 bits (92), Expect = 6e-43
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 431 accttcctggtgggcctcatccagaagcaccggcggcggcagaggaagatgggcgaggac 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22758 accttcctggtgggcctcatccagaagcaccggcggcggcagaggaagatgggcgaggac 22817
Query: 491 atgcacaccatcggctttggcatctacgaggt 522
||||||||||||||||||||||||||||||||
Sbjct: 22818 atgcacaccatcggctttggcatctacgaggt 22849
Score = 174 bits (88), Expect = 1e-40
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 27 aggttgaaagcagaggaagcctgcagaagctgatccgcatccggaatccctggggagagg 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18489 aggttgaaagcagaggaagcctgcagaagctgatccgcatccggaatccctggggagagg 18548
Query: 87 tggagtggaccgggcagtggaacgacaa 114
||||||||||||||||||||||||||||
Sbjct: 18549 tggagtggaccgggcagtggaacgacaa 18576
Score = 168 bits (85), Expect = 8e-39
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1036 ccagaaaatttaccgggaaattgatgtggacaggtcgggcaccatgaactcctatgagat 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34363 ccagaaaatttaccgggaaattgatgtggacaggtcgggcaccatgaactcctatgagat 34422
Query: 1096 gcggaaagcattagaggaagcaggt 1120
|||||||||||||||||||||||||
Sbjct: 34423 gcggaaagcattagaggaagcaggt 34447
Score = 159 bits (80), Expect = 8e-36
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1295 tggctgtgtttctcggtactttgaagttatgactaacctgcctgaagacgtctcatgaaa 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38360 tggctgtgtttctcggtactttgaagttatgactaacctgcctgaagacgtctcatgaaa 38419
Query: 1355 gaaaacccaccaaggactaa 1374
||||||||||||||||||||
Sbjct: 38420 gaaaacccaccaaggactaa 38439
Score = 151 bits (76), Expect = 2e-33
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 115 ctgcccaaactggaacactgtcgacccagaggtgagggaaagcctgaccagacggcatga 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19674 ctgcccaaactggaacactgtcgacccagaggtgagggaaagcctgaccagacggcatga 19733
Query: 175 agatggagaattctgg 190
||||||||||||||||
Sbjct: 19734 agatggagaattctgg 19749
Score = 137 bits (69), Expect = 3e-29
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 780 agaatgatgccagcgaggacgacatcgatgacggattcaggaggctgtttgcccagctgg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28022 agaatgatgccagcgaggacgacatcgatgacggattcaggaggctgtttgcccagctgg 28081
Query: 840 caggagagg 848
|||||||||
Sbjct: 28082 caggagagg 28090
Score = 129 bits (65), Expect = 7e-27
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 971 tcggacgggagtggcaagctgggtctgaaggagttctacatcctttggacgaagattcaa 1030
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 33270 tcggacgggagtggcaagctgggtctgaaggagttctacatcctttggacaaagattcaa 33329
Query: 1031 aaataccag 1039
|||||||||
Sbjct: 33330 aaataccag 33338
Score = 127 bits (64), Expect = 3e-26
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 906 gccaagacatcaagtcagacggcttcagcatcgaaacctgcaagatcatggttgacatgc 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32210 gccaagacatcaagtcagacggcttcagcatcgaaacctgcaagatcatggttgacatgc 32269
Query: 966 tgga 969
||||
Sbjct: 32270 tgga 32273
Score = 121 bits (61), Expect = 2e-24
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 846 aggatgcagagatttctgcctttgagttgcagacgatcctgagaagagttctagcaaagc 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29899 aggatgcagagatttctgcctttgagttgcagacgatcctgagaagagttctagcaaagc 29958
Query: 906 g 906
|
Sbjct: 29959 g 29959
Score = 117 bits (59), Expect = 3e-23
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1236 ggatatttaagcagctggattcagagaatactggaacaatcgagctggaccttatctct 1294
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35943 ggatatttaagcagctggattcagagaatactggaacaatcgagctggaccttatctct 36001
Score = 105 bits (53), Expect = 1e-19
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 2127 gacgcgggcttgactccttcctggctgcaccttggggaaatgctagcaacatt 2179
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39349 gacgcgggcttgactccttcctggctgcaccttggggaaatgctagcaacatt 39401
Score = 73.8 bits (37), Expect = 4e-10
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 745 agtcgtggacgatgaaatcgaggccgacctggaagag 781
|||||||||||||||||||||||||||||||||||||
Sbjct: 27005 agtcgtggacgatgaaatcgaggccgacctggaagag 27041
>Sscrofa_Chr02
|| Length = 162569375
Score = 67.9 bits (34), Expect = 2e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 644 ctgccgccgggcgagtacatcctggtgccctccaccttcgagcccaacaaggacggggac 703
|||||||| ||||||||| | ||||||| ||||||||||||||||||||||| || |||
Sbjct: 6134693 ctgccgcccggcgagtacgtggtggtgccttccaccttcgagcccaacaaggagggcgac 6134634
Query: 704 tt 705
||
Sbjct: 6134633 tt 6134632
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 60,899,679
Number of extensions: 417
Number of successful extensions: 417
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 417
Number of HSP's successfully gapped: 17
Length of query: 2231
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2209
Effective length of database: 2,808,408,574
Effective search space: 6203774539966
Effective search space used: 6203774539966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)