Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008612
(1206 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001193847.1| kinesin-like protein KIF21A [Bos taurus]. 508 e-144
Alignment gi|XP_002694287.1| PREDICTED: Kinesin-like protein at 3A-like [... 356 2e-98
Alignment gi|NP_001193034.1| kinesin family member 4A [Bos taurus]. 197 2e-50
Alignment gi|XP_002700074.1| PREDICTED: Kinesin-like protein at 3A-like [... 197 2e-50
Alignment gi|NP_001193052.1| kinesin-like protein KIF27 [Bos taurus]. 191 1e-48
Alignment gi|XP_002689853.1| PREDICTED: kinesin family member 3B-like [Bo... 191 1e-48
Alignment gi|XP_002696621.1| PREDICTED: kinesin family member 7 [Bos taur... 175 6e-44
Alignment gi|XP_001788646.2| PREDICTED: kinesin family member 7 [Bos taur... 175 6e-44
Alignment gi|NP_001098682.1| kinesin-like protein KIF17 [Bos taurus]. 139 4e-33
Alignment gi|NP_001179761.1| kinesin-like protein KIF15 [Bos taurus]. 133 3e-31
>ref|NP_001193847.1| kinesin-like protein KIF21A [Bos taurus].
Length = 1653
Score = 508 bits (1309), Expect = e-144
Identities = 254/262 (96%), Positives = 254/262 (96%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIY QCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH
Sbjct: 61 QEQIYIQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSIEEKKH SIKNGLP PDFKVNAQFLELYNEEVLDLFDTTRDIDAK KKSNIRIHED
Sbjct: 121 LFKSIEEKKHTSIKNGLPPPDFKVNAQFLELYNEEVLDLFDTTRDIDAKTKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHL QTRMC
Sbjct: 181 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLCQTRMC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQID E A DNKVISESSQMNE
Sbjct: 241 PQIDAEIATDNKVISESSQMNE 262
>ref|XP_002694287.1| PREDICTED: Kinesin-like protein at 3A-like [Bos taurus].
Length = 1527
Score = 356 bits (914), Expect = 2e-98
Identities = 168/233 (72%), Positives = 201/233 (86%)
Frame = +2
Query: 461 RIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCIEKLIE 640
RIRPQL+KE+IEGCHICTSVTPGEPQV LGKDKAFT+D+VFD+D+ QEQIY+ C+ KL+E
Sbjct: 47 RIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQEQIYSTCVSKLVE 106
Query: 641 GCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSIEEKKHASIK 820
GCFEGYNATV AYGQTGAGKTYTMGTGFDV EEEQGII RA+ HLF I E+K + +
Sbjct: 107 GCFEGYNATVLAYGQTGAGKTYTMGTGFDVATAEEEQGIIPRAIAHLFGGIAERKQRAQE 166
Query: 821 NGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTVGVTTRT 1000
G+ P+FKV+AQFLELYNEE+LDLFD+ RD DA+++KS+I+IHED++G IYT GVT+R
Sbjct: 167 QGVAGPEFKVSAQFLELYNEEILDLFDSARDPDARHRKSHIKIHEDASGSIYTTGVTSRL 226
Query: 1001 VNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCPQIDTEN 1159
++++ E++QCLK GALSRTTASTQMNVQSSRSHAIFTIHL Q RMC + D N
Sbjct: 227 ISSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRMCARPDLVN 279
>ref|NP_001193034.1| kinesin family member 4A [Bos taurus].
Length = 1234
Score = 197 bits (501), Expect = 2e-50
Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 1/230 (0%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
VRVA+R RP + KE EGC +C S PGEPQV +G DK+FT+D+VFD ++QE+++ +
Sbjct: 10 VRVALRCRPLVPKEINEGCQMCLSFVPGEPQVVVGTDKSFTYDFVFDPSTEQEEVFNTAV 69
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQ-GIISRAVKHLFKSIEEK 802
LI+G F+GYNATV AYGQTG+GKTY+MG + E G+I R ++ LFK I++K
Sbjct: 70 APLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDKK 129
Query: 803 KHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTV 982
+F + +LE+YNEE+LDL +R+ K I I ED GI +
Sbjct: 130 SDF---------EFTLKVSYLEIYNEEILDLLCPSRE-----KAPQINIREDPKEGIKIM 175
Query: 983 GVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTR 1132
G+T +TV + + CL+ G RT AST MN QSSRSHAIFTI + Q +
Sbjct: 176 GLTEKTVFIALDTVSCLEQGNNCRTVASTAMNSQSSRSHAIFTISIEQRK 225
>ref|XP_002700074.1| PREDICTED: Kinesin-like protein at 3A-like [Bos taurus].
Length = 1234
Score = 197 bits (501), Expect = 2e-50
Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 1/230 (0%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
VRVA+R RP + KE EGC +C S PGEPQV +G DK+FT+D+VFD ++QE+++ +
Sbjct: 10 VRVALRCRPLVPKEINEGCQMCLSFVPGEPQVVVGTDKSFTYDFVFDPSTEQEEVFNTAV 69
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQ-GIISRAVKHLFKSIEEK 802
LI+G F+GYNATV AYGQTG+GKTY+MG + E G+I R ++ LFK I++K
Sbjct: 70 APLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDKK 129
Query: 803 KHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTV 982
+F + +LE+YNEE+LDL +R+ K I I ED GI +
Sbjct: 130 SDF---------EFTLKVSYLEIYNEEILDLLCPSRE-----KAPQINIREDPKEGIKIM 175
Query: 983 GVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTR 1132
G+T +TV + + CL+ G RT AST MN QSSRSHAIFTI + Q +
Sbjct: 176 GLTEKTVFIALDTVSCLEQGNNCRTVASTAMNSQSSRSHAIFTISIEQRK 225
>ref|NP_001193052.1| kinesin-like protein KIF27 [Bos taurus].
Length = 1395
Score = 191 bits (484), Expect = 1e-48
Identities = 97/231 (41%), Positives = 142/231 (61%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E V+VA+RIRP L KE + C V P Q+ +G+D+ FTFD+VF +S Q+++Y
Sbjct: 2 EEIPVKVAIRIRPLLCKEVLHNHQACVRVIPNTQQIIIGRDRIFTFDFVFGKNSTQDEVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G +++E ++GII RA++ +F++I
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVASVVEGQKGIIPRAIQEIFQNI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
+G PS DF + ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 ---------SGKPSIDFNIKVSYIEVYKEDLRDL------LELETSVKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
VG V + E+M L++G +R T +TQMN SSRSHAIFTI L Q
Sbjct: 167 VIVGAKECQVESADEVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISLCQ 217
>ref|XP_002689853.1| PREDICTED: kinesin family member 3B-like [Bos taurus].
Length = 1395
Score = 191 bits (484), Expect = 1e-48
Identities = 97/231 (41%), Positives = 142/231 (61%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E V+VA+RIRP L KE + C V P Q+ +G+D+ FTFD+VF +S Q+++Y
Sbjct: 2 EEIPVKVAIRIRPLLCKEVLHNHQACVRVIPNTQQIIIGRDRIFTFDFVFGKNSTQDEVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G +++E ++GII RA++ +F++I
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVASVVEGQKGIIPRAIQEIFQNI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
+G PS DF + ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 ---------SGKPSIDFNIKVSYIEVYKEDLRDL------LELETSVKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
VG V + E+M L++G +R T +TQMN SSRSHAIFTI L Q
Sbjct: 167 VIVGAKECQVESADEVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISLCQ 217
>ref|XP_002696621.1| PREDICTED: kinesin family member 7 [Bos taurus].
Length = 1350
Score = 175 bits (444), Expect = 6e-44
Identities = 99/236 (41%), Positives = 137/236 (58%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E+ VRVA+R+RP L KE + G C +V PG +V LG+D+ F F V D D+ QE +Y
Sbjct: 12 EEAPVRVALRVRPLLRKELLHGHQSCLTVEPGRSRVTLGRDRHFGFHVVLDEDAGQEAVY 71
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
C++ L+E FEG+N TVFAYGQTG+GKTYTMG ++ E+EQGII RA+ FK I
Sbjct: 72 QACVQPLLEAFFEGFNVTVFAYGQTGSGKTYTMGEASVASLHEDEQGIIPRAMAEAFKLI 131
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
+E N L D V+ +LE+Y EE DL ++ +I++ ED G +
Sbjct: 132 DE-------NDL--LDCLVHVSYLEVYKEEFRDL------LEVGTASRDIQLREDDRGNV 176
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCP 1141
GV V E++ L++G +R T +T +N SSRSH IFT+ L Q P
Sbjct: 177 VLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNRLSSRSHTIFTVTLEQRGRAP 232
>ref|XP_001788646.2| PREDICTED: kinesin family member 7 [Bos taurus].
Length = 1209
Score = 175 bits (444), Expect = 6e-44
Identities = 99/236 (41%), Positives = 137/236 (58%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E+ VRVA+R+RP L KE + G C +V PG +V LG+D+ F F V D D+ QE +Y
Sbjct: 12 EEAPVRVALRVRPLLRKELLHGHQSCLTVEPGRSRVTLGRDRHFGFHVVLDEDAGQEAVY 71
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
C++ L+E FEG+N TVFAYGQTG+GKTYTMG ++ E+EQGII RA+ FK I
Sbjct: 72 QACVQPLLEAFFEGFNVTVFAYGQTGSGKTYTMGEASVASLHEDEQGIIPRAMAEAFKLI 131
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
+E N L D V+ +LE+Y EE DL ++ +I++ ED G +
Sbjct: 132 DE-------NDL--LDCLVHVSYLEVYKEEFRDL------LEVGTASRDIQLREDDRGNV 176
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCP 1141
GV V E++ L++G +R T +T +N SSRSH IFT+ L Q P
Sbjct: 177 VLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNRLSSRSHTIFTVTLEQRGRAP 232
>ref|NP_001098682.1| kinesin-like protein KIF17 [Bos taurus].
Length = 1032
Score = 139 bits (351), Expect = 4e-33
Identities = 88/233 (37%), Positives = 127/233 (54%), Gaps = 7/233 (3%)
Frame = +2
Query: 443 SVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKD-------KAFTFDYVFDIDSQQ 601
SV+V VR RP +ER CH +V Q F+ K FTFD + +D
Sbjct: 5 SVKVVVRCRPMNQRERELNCHPVVTVDSARGQCFIQNPGAADQPPKQFTFDGAYYMDHFT 64
Query: 602 EQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHL 781
EQIY + L+EG EGYN T+FAYGQTG+GK++TM D ++GII RA +H+
Sbjct: 65 EQIYNEIAYPLVEGVTEGYNGTIFAYGQTGSGKSFTMQGLPDPAC---QRGIIPRAFEHI 121
Query: 782 FKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDS 961
F+S++ ++ F V A +LE+YNE+V DL T DAK K + + E
Sbjct: 122 FESVQCAENTK---------FLVRASYLEIYNEDVRDLLGT----DAKQK---LELKEHP 165
Query: 962 AGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHL 1120
G+Y G++ TV++ + + ++ G +R+ T MN SSRSH+IFTI +
Sbjct: 166 EKGVYVKGLSMHTVHSVGQCERIMEAGWKNRSVGYTLMNKDSSRSHSIFTISI 218
>ref|NP_001179761.1| kinesin-like protein KIF15 [Bos taurus].
Length = 1388
Score = 133 bits (335), Expect = 3e-31
Identities = 85/234 (36%), Positives = 124/234 (52%), Gaps = 10/234 (4%)
Frame = +2
Query: 443 SVRVAVRIRPQLAKERIEGC-------HICTSVTPGEPQVFLG--KDKAFTFDYVFDIDS 595
+++V VRIRP IEG ++C SV + K F FD+V ++D+
Sbjct: 26 AIKVFVRIRPP-----IEGSGSADGEQNLCLSVLSSTTLRLHSNPEPKTFVFDHVANMDT 80
Query: 596 QQEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYT-MGTGFDVNIIEEEQGIISRAV 772
QE +++ + ++E C GYN T+FAYGQTG+GKT+T MG N +G+I R+
Sbjct: 81 TQESMFSTVAKGIVESCMSGYNGTIFAYGQTGSGKTFTMMGPSESDNFSHNLRGVIPRSF 140
Query: 773 KHLFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIH 952
++LF IE +K K GL F F+E+YNE + DL D+ + + I
Sbjct: 141 EYLFSLIEREKE---KAGL-GKSFLCKCSFIEIYNEHIYDLLDSA--------SAGLYIR 188
Query: 953 EDSAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTI 1114
E G++ VG + V + +E Q L G +R AST MN +SSRSHA+FTI
Sbjct: 189 EHIKKGVFVVGAVEQVVTSAAEAYQVLSGGWRNRRVASTSMNRESSRSHAVFTI 242
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,009,604
Number of extensions: 1128950
Number of successful extensions: 6154
Number of sequences better than 1.0e-05: 64
Number of HSP's gapped: 5972
Number of HSP's successfully gapped: 67
Length of query: 402
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 298
Effective length of database: 14,240,222
Effective search space: 4243586156
Effective search space used: 4243586156
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008612
(1206 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_547366.2| PREDICTED: similar to Kinesin family member 21B... 357 1e-98
Alignment gi|XP_549061.2| PREDICTED: similar to Chromosome-associated kin... 202 7e-52
Alignment gi|XP_541265.1| PREDICTED: similar to kinesin family member 27 ... 192 5e-49
Alignment gi|XP_857815.1| PREDICTED: similar to kinesin family member 27 ... 192 5e-49
Alignment gi|XP_857776.1| PREDICTED: similar to kinesin family member 27 ... 192 5e-49
Alignment gi|XP_857736.1| PREDICTED: similar to kinesin family member 27 ... 192 5e-49
Alignment gi|XP_545852.2| PREDICTED: similar to kinesin family member 7 [... 172 4e-43
Alignment gi|XP_533860.2| PREDICTED: similar to kinesin family member 15 ... 129 6e-30
Alignment gi|XP_859526.1| PREDICTED: similar to Kinesin heavy chain (Ubiq... 125 8e-29
Alignment gi|XP_859492.1| PREDICTED: similar to Kinesin heavy chain (Ubiq... 125 8e-29
>ref|XP_547366.2| PREDICTED: similar to Kinesin family member 21B [Canis familiaris].
Length = 1470
Score = 357 bits (917), Expect = 1e-98
Identities = 169/233 (72%), Positives = 200/233 (85%)
Frame = +2
Query: 461 RIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCIEKLIE 640
RIRPQL+KE+IEGCHICTSVTPGEPQV LGKDKAFT+D+VFD+D+ QEQIY+ C+ KLIE
Sbjct: 51 RIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQEQIYSTCVSKLIE 110
Query: 641 GCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSIEEKKHASIK 820
GCFEGYNATV AYGQTGAGKTYTMGTGFD EEEQGII RA+ HLF I E+K + +
Sbjct: 111 GCFEGYNATVLAYGQTGAGKTYTMGTGFDTATSEEEQGIIPRAIAHLFGGIAERKRRAQE 170
Query: 821 NGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTVGVTTRT 1000
G+ P+FKV+AQFLELYNEE+LDLFD+TRD DA++++SNI+IHED GGIYT GVT+R
Sbjct: 171 QGVAGPEFKVSAQFLELYNEEILDLFDSTRDPDARHRRSNIKIHEDGNGGIYTTGVTSRL 230
Query: 1001 VNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCPQIDTEN 1159
+N++ E++QCLK GALSRTTASTQMNVQSSRSHAIFTIH+ Q R+C Q + N
Sbjct: 231 INSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHVCQMRVCTQPEPVN 283
>ref|XP_549061.2| PREDICTED: similar to Chromosome-associated kinesin KIF4A
(Chromokinesin) [Canis familiaris].
Length = 1234
Score = 202 bits (513), Expect = 7e-52
Identities = 108/230 (46%), Positives = 146/230 (63%), Gaps = 1/230 (0%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
VRVA+R RP + KE EGC +C S PGEPQV +G DK+FT+D+VFD ++QE+++ +
Sbjct: 10 VRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDKSFTYDFVFDPSTEQEEVFNTAV 69
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQ-GIISRAVKHLFKSIEEK 802
LI+G F+GYNATV AYGQTG+GKTY+MG + + E G+I R ++ LFK I++K
Sbjct: 70 APLIKGIFKGYNATVLAYGQTGSGKTYSMGGAYTADQENEPTVGVIPRVIQLLFKEIDKK 129
Query: 803 KHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTV 982
+F + +LE+YNEE+LDL +R+ K S I I ED GI V
Sbjct: 130 SDI---------EFTLKVSYLEIYNEEILDLLCPSRE-----KASQINIREDPKEGIKIV 175
Query: 983 GVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTR 1132
G+T +TV + + CL+ G RT AST MN QSSRSHAIFTI + Q +
Sbjct: 176 GLTEKTVVVALDTVSCLEQGNNCRTVASTAMNSQSSRSHAIFTISIEQRK 225
>ref|XP_541265.1| PREDICTED: similar to kinesin family member 27 isoform 1 [Canis
familiaris].
Length = 1396
Score = 192 bits (488), Expect = 5e-49
Identities = 98/231 (42%), Positives = 141/231 (61%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E V+VAVRIRP L KE + C V P Q+ +G+D+ FTFD+VF +S Q+Q+Y
Sbjct: 2 EEIPVKVAVRIRPLLCKEVLHNHQACVRVIPNTQQIIIGRDRVFTFDFVFGKNSTQDQVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G +++E ++GII RA++ +F++I
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVASVVEGQKGIIPRAIQEIFQNI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
E PS DF + ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 SEN---------PSIDFNIKVSYIEVYKEDLKDL------LELETSMKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
VG V + E+M L++G +R T +TQMN SSRSHAIFTI + Q
Sbjct: 167 VIVGAKECQVESADEVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISICQ 217
>ref|XP_857815.1| PREDICTED: similar to kinesin family member 27 isoform 4 [Canis
familiaris].
Length = 1299
Score = 192 bits (488), Expect = 5e-49
Identities = 98/231 (42%), Positives = 141/231 (61%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E V+VAVRIRP L KE + C V P Q+ +G+D+ FTFD+VF +S Q+Q+Y
Sbjct: 2 EEIPVKVAVRIRPLLCKEVLHNHQACVRVIPNTQQIIIGRDRVFTFDFVFGKNSTQDQVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G +++E ++GII RA++ +F++I
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVASVVEGQKGIIPRAIQEIFQNI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
E PS DF + ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 SEN---------PSIDFNIKVSYIEVYKEDLKDL------LELETSMKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
VG V + E+M L++G +R T +TQMN SSRSHAIFTI + Q
Sbjct: 167 VIVGAKECQVESADEVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISICQ 217
>ref|XP_857776.1| PREDICTED: similar to kinesin family member 27 isoform 3 [Canis
familiaris].
Length = 1330
Score = 192 bits (488), Expect = 5e-49
Identities = 98/231 (42%), Positives = 141/231 (61%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E V+VAVRIRP L KE + C V P Q+ +G+D+ FTFD+VF +S Q+Q+Y
Sbjct: 2 EEIPVKVAVRIRPLLCKEVLHNHQACVRVIPNTQQIIIGRDRVFTFDFVFGKNSTQDQVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G +++E ++GII RA++ +F++I
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVASVVEGQKGIIPRAIQEIFQNI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
E PS DF + ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 SEN---------PSIDFNIKVSYIEVYKEDLKDL------LELETSMKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
VG V + E+M L++G +R T +TQMN SSRSHAIFTI + Q
Sbjct: 167 VIVGAKECQVESADEVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISICQ 217
>ref|XP_857736.1| PREDICTED: similar to kinesin family member 27 isoform 2 [Canis
familiaris].
Length = 892
Score = 192 bits (488), Expect = 5e-49
Identities = 98/231 (42%), Positives = 141/231 (61%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E V+VAVRIRP L KE + C V P Q+ +G+D+ FTFD+VF +S Q+Q+Y
Sbjct: 2 EEIPVKVAVRIRPLLCKEVLHNHQACVRVIPNTQQIIIGRDRVFTFDFVFGKNSTQDQVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G +++E ++GII RA++ +F++I
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVASVVEGQKGIIPRAIQEIFQNI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
E PS DF + ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 SEN---------PSIDFNIKVSYIEVYKEDLKDL------LELETSMKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
VG V + E+M L++G +R T +TQMN SSRSHAIFTI + Q
Sbjct: 167 VIVGAKECQVESADEVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISICQ 217
>ref|XP_545852.2| PREDICTED: similar to kinesin family member 7 [Canis familiaris].
Length = 1364
Score = 172 bits (437), Expect = 4e-43
Identities = 99/251 (39%), Positives = 139/251 (55%)
Frame = +2
Query: 389 PGARL*LSAGMWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFT 568
P + L +E+ VRVA+R+RP L KE + G C V P ++ LG+D+ F
Sbjct: 31 PSCNMGLETQRLPGAEEAPVRVALRVRPLLPKELLHGHQSCLRVEPEHSRITLGRDRHFG 90
Query: 569 FDYVFDIDSQQEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEE 748
F V D D+ QE +Y C++ L+E FEG+NATVFAYGQTG+GKTYTMG ++ E+E
Sbjct: 91 FHVVLDEDTGQEAVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLHEDE 150
Query: 749 QGIISRAVKHLFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKN 928
QGII RA+ FK I+E N L D V+ +LE+Y EE DL ++
Sbjct: 151 QGIIPRAMAEAFKLIDE-------NDL--LDCLVHVSYLEVYKEEFRDL------LEVGT 195
Query: 929 KKSNIRIHEDSAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIF 1108
+I++ ED G + GV V E++ L++G +R T +T +N SSRSH +F
Sbjct: 196 ASRDIQLREDDRGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNRLSSRSHTVF 255
Query: 1109 TIHLSQTRMCP 1141
T+ L Q P
Sbjct: 256 TVTLEQRGRAP 266
>ref|XP_533860.2| PREDICTED: similar to kinesin family member 15 [Canis familiaris].
Length = 1395
Score = 129 bits (324), Expect = 6e-30
Identities = 83/236 (35%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Frame = +2
Query: 425 GAPDES-SVRVAVRIRPQL-AKERIEG-CHICTSVTPGEPQVFLG--KDKAFTFDYVFDI 589
GA +E +++V VRIRP +G ++C SV + K FTFD+V D+
Sbjct: 28 GALNEGDAIKVFVRIRPLTEGSGSADGEQNLCLSVLSSTTLRLHSNPEPKTFTFDHVADM 87
Query: 590 DSQQEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYT-MGTGFDVNIIEEEQGIISR 766
+ QE +++ + ++E C GYN T+FAYGQTG+GKT+T MG + +G+I R
Sbjct: 88 QTTQESVFSTVAKGIVESCMSGYNGTIFAYGQTGSGKTFTMMGPSESDHFSHNLRGVIPR 147
Query: 767 AVKHLFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIR 946
+ ++LF I+ +K K G F F+E+YNE++ DL D+ + +
Sbjct: 148 SFEYLFSLIDREKE---KAG-AGKSFLCKCSFIEIYNEQIYDLLDSA--------SAGLY 195
Query: 947 IHEDSAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTI 1114
+ E G++ VG + V + +E Q L G +R AST MN +SSRSHA+FTI
Sbjct: 196 LREHIKKGVFVVGAVEQAVTSAAEAYQVLSGGWRNRRVASTSMNRESSRSHAVFTI 251
>ref|XP_859526.1| PREDICTED: similar to Kinesin heavy chain (Ubiquitous kinesin heavy
chain) (UKHC) isoform 6 [Canis familiaris].
Length = 964
Score = 125 bits (314), Expect = 8e-29
Identities = 83/233 (35%), Positives = 119/233 (51%), Gaps = 1/233 (0%)
Frame = +2
Query: 431 PDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQI 610
P E +++V R RP E G GE V + K + FD VF ++ QEQ+
Sbjct: 4 PAECNIKVMCRFRPLNESEVNRGDKYIAKFQ-GEDTVMIAS-KPYAFDRVFQSNTSQEQV 61
Query: 611 YTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTM-GTGFDVNIIEEEQGIISRAVKHLFK 787
Y C +K+++ EGYN T+FAYGQT +GKT+TM G D E GII R V+ +F
Sbjct: 62 YNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHD----PEGMGIIPRIVQDIFN 117
Query: 788 SIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAG 967
I S+ L +F + + E+Y +++ DL D + K+N+ +HED
Sbjct: 118 YI-----YSMDENL---EFHIKVSYFEIYLDKIRDLLDVS--------KTNLSVHEDKNR 161
Query: 968 GIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
Y G T R V + E+M + G +R A T MN SSRSH+IF I++ Q
Sbjct: 162 VPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQ 214
>ref|XP_859492.1| PREDICTED: similar to Kinesin heavy chain (Ubiquitous kinesin heavy
chain) (UKHC) isoform 5 [Canis familiaris].
Length = 965
Score = 125 bits (314), Expect = 8e-29
Identities = 83/233 (35%), Positives = 119/233 (51%), Gaps = 1/233 (0%)
Frame = +2
Query: 431 PDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQI 610
P E +++V R RP E G GE V + K + FD VF ++ QEQ+
Sbjct: 4 PAECNIKVMCRFRPLNESEVNRGDKYIAKFQ-GEDTVMIAS-KPYAFDRVFQSNTSQEQV 61
Query: 611 YTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTM-GTGFDVNIIEEEQGIISRAVKHLFK 787
Y C +K+++ EGYN T+FAYGQT +GKT+TM G D E GII R V+ +F
Sbjct: 62 YNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHD----PEGMGIIPRIVQDIFN 117
Query: 788 SIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAG 967
I S+ L +F + + E+Y +++ DL D + K+N+ +HED
Sbjct: 118 YI-----YSMDENL---EFHIKVSYFEIYLDKIRDLLDVS--------KTNLSVHEDKNR 161
Query: 968 GIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
Y G T R V + E+M + G +R A T MN SSRSH+IF I++ Q
Sbjct: 162 VPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQ 214
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,837,021
Number of extensions: 1157024
Number of successful extensions: 6826
Number of sequences better than 1.0e-05: 83
Number of HSP's gapped: 6626
Number of HSP's successfully gapped: 86
Length of query: 402
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 297
Effective length of database: 15,374,224
Effective search space: 4566144528
Effective search space used: 4566144528
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008612
(1206 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003126654.2| PREDICTED: kinesin-like protein KIF21A, part... 526 e-149
Alignment gi|XP_003357716.1| PREDICTED: kinesin-like protein KIF21B [Sus ... 359 2e-99
Alignment gi|XP_003360401.1| PREDICTED: chromosome-associated kinesin KIF... 199 3e-51
Alignment gi|XP_003356712.1| PREDICTED: kinesin-like protein KIF7-like, p... 165 4e-41
Alignment gi|XP_003357760.1| PREDICTED: kinesin-like protein KIF19-like [... 154 9e-38
Alignment gi|XP_003132205.2| PREDICTED: kinesin-like protein KIF15, parti... 133 2e-31
Alignment gi|XP_003359464.1| PREDICTED: kinesin heavy chain isoform 5C [S... 129 2e-30
Alignment gi|XP_003361858.1| PREDICTED: kinesin heavy chain isoform 5A [S... 123 2e-28
Alignment gi|XP_003359095.1| PREDICTED: kinesin-like protein KIF13B-like,... 123 2e-28
Alignment gi|XP_003125364.2| PREDICTED: LOW QUALITY PROTEIN: kinesin-like... 123 2e-28
>ref|XP_003126654.2| PREDICTED: kinesin-like protein KIF21A, partial [Sus scrofa].
Length = 507
Score = 526 bits (1354), Expect = e-149
Identities = 262/262 (100%), Positives = 262/262 (100%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH
Sbjct: 61 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED
Sbjct: 121 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC
Sbjct: 181 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQIDTENAIDNKVISESSQMNE
Sbjct: 241 PQIDTENAIDNKVISESSQMNE 262
>ref|XP_003357716.1| PREDICTED: kinesin-like protein KIF21B [Sus scrofa].
Length = 1573
Score = 359 bits (921), Expect = 2e-99
Identities = 168/238 (70%), Positives = 205/238 (86%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
V+VAVRIRPQL+KE+IEGCHICTSVTPGEPQV LGKDKAFT+D+VFD+D+ QE++Y+ C+
Sbjct: 9 VKVAVRIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQERVYSTCV 68
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSIEEKK 805
KL+EGCFEGYNATV AYGQTGAGKTYTMGTGFD+ EEEQGII RA+ HLF I E+K
Sbjct: 69 SKLVEGCFEGYNATVLAYGQTGAGKTYTMGTGFDMATSEEEQGIIPRAIAHLFGGIAERK 128
Query: 806 HASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTVG 985
+ + G+ P+FKV+AQFLELYNEE+LDLFD+ RD DA++++SNI+IHED+ GGIYT G
Sbjct: 129 RRAQEQGVAGPEFKVSAQFLELYNEEILDLFDSARDPDARHRRSNIKIHEDANGGIYTTG 188
Query: 986 VTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCPQIDTEN 1159
VT R ++++ E++QCLK GALSRTTASTQMNVQSSRSHAIFTIH+ Q R+C + D N
Sbjct: 189 VTARLISSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHVCQMRLCARPDLVN 246
>ref|XP_003360401.1| PREDICTED: chromosome-associated kinesin KIF4A [Sus scrofa].
Length = 1234
Score = 199 bits (506), Expect = 3e-51
Identities = 107/230 (46%), Positives = 144/230 (62%), Gaps = 1/230 (0%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
VRVA+R RP + KE EGC +C S PGEPQV +G DK+FT+D+VFD ++QE+++ +
Sbjct: 10 VRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDKSFTYDFVFDPSTEQEEVFNTAV 69
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQ-GIISRAVKHLFKSIEEK 802
LI+G F+GYNATV AYGQTG+GKTY+MG + E G+I R ++ LFK I++K
Sbjct: 70 APLIKGIFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDKK 129
Query: 803 KHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTV 982
+F + +LE+YNEE+LDL +R+ K I I ED GI V
Sbjct: 130 SDF---------EFTLKVSYLEIYNEEILDLLCPSRE-----KAPQINIREDPKEGIKIV 175
Query: 983 GVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTR 1132
G+T +TV + + CL+ G RT AST MN QSSRSHAIFTI + Q +
Sbjct: 176 GLTEKTVFVALDTVSCLEQGNNCRTVASTAMNSQSSRSHAIFTISIEQRK 225
>ref|XP_003356712.1| PREDICTED: kinesin-like protein KIF7-like, partial [Sus scrofa].
Length = 436
Score = 165 bits (418), Expect = 4e-41
Identities = 101/256 (39%), Positives = 139/256 (54%), Gaps = 11/256 (4%)
Frame = +2
Query: 407 LSAGMWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFD 586
L A A +++ VRVA+R+RP L KE + G C V PG V LG+D+ F F V D
Sbjct: 3 LEAQRLPAAEKAPVRVALRVRPLLPKELLHGHQSCLRVEPGHGGVTLGRDRHFGFHVVLD 62
Query: 587 IDSQQEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISR 766
D+ QE +Y C++ L+E FEG+NATVFAYGQTG+GKTYTMG ++ E+EQGII R
Sbjct: 63 EDAGQETVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGETSVASLHEDEQGIIPR 122
Query: 767 AVKHLFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIR 946
A+ FK I+E N L D V+ +LE+Y EE DL ++ +I+
Sbjct: 123 AMAEAFKLIDE-------NDL--LDCLVHVSYLEVYKEEFRDL------LEVGTASRDIQ 167
Query: 947 IHEDSAGGI-----------YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSR 1093
+ ED G + GV V E++ L++G +R T +T +N SSR
Sbjct: 168 LREDDRGNVGEELLGPPLARIVCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNRLSSR 227
Query: 1094 SHAIFTIHLSQTRMCP 1141
SH +FT+ L Q P
Sbjct: 228 SHTVFTVTLEQRGRAP 243
>ref|XP_003357760.1| PREDICTED: kinesin-like protein KIF19-like [Sus scrofa].
Length = 394
Score = 154 bits (389), Expect = 9e-38
Identities = 77/193 (39%), Positives = 116/193 (60%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E V+VAVRIRP L KE + C V P Q+ +G+D+ FTFD+VF +S Q+++Y
Sbjct: 2 EEIPVKVAVRIRPLLCKEVLHNHQACVRVIPNTQQIIIGRDRVFTFDFVFGKNSTQDEVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G V+++E+++GII RA++ +F++I
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVVSVVEDQKGIIPRAIQEIFQNI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
E PS DF + ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 SEN---------PSIDFTIKVSYIEVYKEDLRDL------LELETSMKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTE 1012
T NT+
Sbjct: 167 DPATGNMNTRNTQ 179
>ref|XP_003132205.2| PREDICTED: kinesin-like protein KIF15, partial [Sus scrofa].
Length = 1256
Score = 133 bits (334), Expect = 2e-31
Identities = 82/229 (35%), Positives = 122/229 (53%), Gaps = 5/229 (2%)
Frame = +2
Query: 443 SVRVAVRIRPQLAKERIEGC--HICTSVTPGEPQVFLG--KDKAFTFDYVFDIDSQQEQI 610
+++V VRIRP + ++C SV + K FTFD+V D+D+ QE +
Sbjct: 26 AIKVFVRIRPLTEGSGLADGEQNLCLSVLSSTTLRLHSNPEPKTFTFDHVADMDTTQESM 85
Query: 611 YTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYT-MGTGFDVNIIEEEQGIISRAVKHLFK 787
++ + ++E C GYN T+FAYGQTG+GKT+T MG N +G+I R+ ++LF
Sbjct: 86 FSTVAKGIVESCMGGYNGTIFAYGQTGSGKTFTMMGPSESDNFSHNLRGVIPRSFEYLFS 145
Query: 788 SIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAG 967
IE +K K G F F+E+YNE++ DL D + + + E
Sbjct: 146 LIEREKE---KAG-AGKSFLCKCSFIEIYNEQIYDLLDAA--------SAGLYLREHIKK 193
Query: 968 GIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTI 1114
G++ VG + V + +E Q L G +R AST MN +SSRSHA+FTI
Sbjct: 194 GVFVVGAVEQVVTSAAEAYQVLSGGWRNRRVASTSMNRESSRSHAVFTI 242
>ref|XP_003359464.1| PREDICTED: kinesin heavy chain isoform 5C [Sus scrofa].
Length = 957
Score = 129 bits (325), Expect = 2e-30
Identities = 83/250 (33%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Frame = +2
Query: 431 PDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQI 610
P E S++V R RP E + G G+ V +G+ K + FD V + QEQ+
Sbjct: 4 PAECSIKVMCRFRPLNEAEILRGDKFIPKFK-GDETVVIGQGKPYVFDRVLPPSTTQEQV 62
Query: 611 YTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTM-GTGFDVNIIEEEQGIISRAVKHLFK 787
Y C +++++ EGYN T+FAYGQT +GKT+TM G D ++ GII R +F
Sbjct: 63 YNACAKQIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPQLM----GIIPRIAHDIFD 118
Query: 788 SIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAG 967
I S+ L +F + + E+Y +++ DL D + K+N+ +HED
Sbjct: 119 HI-----YSMDENL---EFHIKVSYFEIYLDKIRDLLDVS--------KTNLAVHEDKNR 162
Query: 968 GIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCPQI 1147
Y G T R V++ E+M + G +R A T MN SSRSH+IF I++ Q +
Sbjct: 163 VPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQ----ENV 218
Query: 1148 DTENAIDNKV 1177
+TE + K+
Sbjct: 219 ETEKKLSGKL 228
>ref|XP_003361858.1| PREDICTED: kinesin heavy chain isoform 5A [Sus scrofa].
Length = 850
Score = 123 bits (309), Expect = 2e-28
Identities = 82/249 (32%), Positives = 128/249 (51%), Gaps = 1/249 (0%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E S++V R RP E + G + G+ V +G K + FD VF ++ QEQ+Y
Sbjct: 6 NECSIKVLCRFRPLNQAEILRGDKFIP-IFQGDDSVVIG-GKPYVFDRVFPPNTTQEQVY 63
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTM-GTGFDVNIIEEEQGIISRAVKHLFKS 790
C ++++ GYN T+FAYGQT +GKT+TM G D ++ GII R + +F
Sbjct: 64 HACAMQIVKDVLAGYNGTIFAYGQTSSGKTHTMEGKLHDPQLM----GIIPRIARDIFNH 119
Query: 791 IEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGG 970
I S+ L +F + + E+Y +++ DL D T K+N+ +HED
Sbjct: 120 I-----YSMDENL---EFHIKVSYFEIYLDKIRDLLDVT--------KTNLSVHEDKNRV 163
Query: 971 IYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCPQID 1150
+ G T R V++ E++ + G +R A T MN SSRSH+IF I++ Q M +
Sbjct: 164 PFVKGCTERFVSSPEEILDVIDEGKSNRHVAVTNMNEHSSRSHSIFLINIKQENM----E 219
Query: 1151 TENAIDNKV 1177
TE + K+
Sbjct: 220 TEQKLSGKL 228
>ref|XP_003359095.1| PREDICTED: kinesin-like protein KIF13B-like, partial [Sus scrofa].
Length = 628
Score = 123 bits (309), Expect = 2e-28
Identities = 99/323 (30%), Positives = 154/323 (47%), Gaps = 28/323 (8%)
Frame = +2
Query: 245 PQRRRHLSIQSPNMAGARRR*ACCPLTLQPPAPERRGCGGA--SVRRC---GGPGARL*L 409
P RR + S GA R P T P P R A + R C G+R
Sbjct: 59 PLRRLQVPSCSEGAPGAPRPTPPLPQTPPRPRPSRPQPPPARSAPRSCPVAAADGSRSES 118
Query: 410 SAGMWGAPDESSVRVAVRIRPQLAKE--------------RIEGCHICTSVTPGEPQVFL 547
G G +S V+VAVRIRP +E ++ + T+++ G+ +
Sbjct: 119 LGG--GRMGDSKVKVAVRIRPMNRREIDLHTKCVVDVDANKVILNPVNTNLSKGDAR--- 173
Query: 548 GKDKAFTFDYVF--------DIDSQQEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKT 703
+ K F +D+ F + + QE ++ E +++ FEGYNA +FAYGQTG+GK+
Sbjct: 174 SQPKVFAYDHCFWSMDESVREKYASQEDVFKCLGENILQNAFEGYNACIFAYGQTGSGKS 233
Query: 704 YTM-GTGFDVNIIEEEQGIISRAVKHLFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNE 880
YTM GT ++ G+I R LF+ +++++ FKV ++E+YNE
Sbjct: 234 YTMMGTA-------DQPGLIPRLCSGLFERTQKEENEE-------QSFKVEVSYMEIYNE 279
Query: 881 EVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTT 1060
+V DL +D K + +++ E S G Y G++ V + ++ + G SRT
Sbjct: 280 KVRDL------LDPKGSRQTLKVREHSVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTV 333
Query: 1061 ASTQMNVQSSRSHAIFTIHLSQT 1129
A+T MN +SSRSHA+F I L+ T
Sbjct: 334 AATNMNEESSRSHAVFKITLTHT 356
>ref|XP_003125364.2| PREDICTED: LOW QUALITY PROTEIN: kinesin-like protein KIF3C [Sus
scrofa].
Length = 697
Score = 123 bits (309), Expect = 2e-28
Identities = 81/233 (34%), Positives = 118/233 (50%), Gaps = 9/233 (3%)
Frame = +2
Query: 443 SVRVAVRIRPQLAKERIEGCH-ICT------SVTPGEPQVFLGK-DKAFTFDYVFDIDSQ 598
+++V R RP KE G I T VT P+ LG+ K FTFD V+D S+
Sbjct: 10 ALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRAALGELPKTFTFDAVYDASSK 69
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTM-GTGFDVNIIEEEQGIISRAVK 775
Q +Y + + L++ +G+N TVFAYGQTG GKTYTM GT + E +G+I A +
Sbjct: 70 QADLYDETVRPLVDSVLQGFNGTVFAYGQTGTGKTYTMQGTWVE----PELRGVIPNAFE 125
Query: 776 HLFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHE 955
H+F I + + + V A +LE+Y EE+ RD+ +K + + E
Sbjct: 126 HIFTHISRSQ---------NQQYLVRASYLEIYQEEI-------RDLLSKEPGKRLELKE 169
Query: 956 DSAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTI 1114
+ G+Y +++ E+ + LG +R ST MN SSRSHAIF I
Sbjct: 170 NPETGVYIKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFVI 222
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,843,485
Number of extensions: 746077
Number of successful extensions: 4066
Number of sequences better than 1.0e-05: 41
Number of HSP's gapped: 3958
Number of HSP's successfully gapped: 43
Length of query: 402
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 301
Effective length of database: 8,829,335
Effective search space: 2657629835
Effective search space used: 2657629835
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008612
(1206 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001102512.1| kinesin-like protein KIF21A isoform 4 [Mus m... 486 e-137
Alignment gi|NP_001102511.1| kinesin-like protein KIF21A isoform 2 [Mus m... 486 e-137
Alignment gi|NP_001102510.1| kinesin-like protein KIF21A isoform 1 [Mus m... 486 e-137
Alignment gi|NP_057914.2| kinesin-like protein KIF21A isoform 3 [Mus musc... 486 e-137
Alignment gi|NP_001034561.1| kinesin-like protein KIF21B [Mus musculus]. 370 e-102
Alignment gi|NP_032472.2| chromosome-associated kinesin KIF4 [Mus musculu... 203 2e-52
Alignment gi|NP_780423.2| kinesin-like protein KIF27 [Mus musculus]. 190 2e-48
Alignment gi|NP_034756.2| kinesin-like protein KIF7 [Mus musculus]. 169 4e-42
Alignment gi|NP_001177907.1| kinesin-like protein KIF17 isoform 2 [Mus mu... 132 4e-31
Alignment gi|NP_034753.1| kinesin-like protein KIF17 isoform 1 [Mus muscu... 132 4e-31
>ref|NP_001102512.1| kinesin-like protein KIF21A isoform 4 [Mus musculus].
Length = 1567
Score = 486 bits (1251), Expect = e-137
Identities = 241/262 (91%), Positives = 251/262 (95%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
M GA DESSVRVAVRIRPQLAKE+IEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MLGAADESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNI+EEEQGIISRAV+H
Sbjct: 61 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIMEEEQGIISRAVRH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSI+EKK ++IKNGLP P+FKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED
Sbjct: 121 LFKSIDEKKTSAIKNGLPPPEFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
S GGIYTVGVTTRTVNTE EMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIH+ QTR+C
Sbjct: 181 STGGIYTVGVTTRTVNTEPEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQ D ENA DNK+ISESS MNE
Sbjct: 241 PQTDAENATDNKLISESSPMNE 262
>ref|NP_001102511.1| kinesin-like protein KIF21A isoform 2 [Mus musculus].
Length = 1628
Score = 486 bits (1251), Expect = e-137
Identities = 241/262 (91%), Positives = 251/262 (95%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
M GA DESSVRVAVRIRPQLAKE+IEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MLGAADESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNI+EEEQGIISRAV+H
Sbjct: 61 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIMEEEQGIISRAVRH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSI+EKK ++IKNGLP P+FKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED
Sbjct: 121 LFKSIDEKKTSAIKNGLPPPEFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
S GGIYTVGVTTRTVNTE EMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIH+ QTR+C
Sbjct: 181 STGGIYTVGVTTRTVNTEPEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQ D ENA DNK+ISESS MNE
Sbjct: 241 PQTDAENATDNKLISESSPMNE 262
>ref|NP_001102510.1| kinesin-like protein KIF21A isoform 1 [Mus musculus].
Length = 1672
Score = 486 bits (1251), Expect = e-137
Identities = 241/262 (91%), Positives = 251/262 (95%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
M GA DESSVRVAVRIRPQLAKE+IEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MLGAADESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNI+EEEQGIISRAV+H
Sbjct: 61 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIMEEEQGIISRAVRH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSI+EKK ++IKNGLP P+FKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED
Sbjct: 121 LFKSIDEKKTSAIKNGLPPPEFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
S GGIYTVGVTTRTVNTE EMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIH+ QTR+C
Sbjct: 181 STGGIYTVGVTTRTVNTEPEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQ D ENA DNK+ISESS MNE
Sbjct: 241 PQTDAENATDNKLISESSPMNE 262
>ref|NP_057914.2| kinesin-like protein KIF21A isoform 3 [Mus musculus].
Length = 1573
Score = 486 bits (1251), Expect = e-137
Identities = 241/262 (91%), Positives = 251/262 (95%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
M GA DESSVRVAVRIRPQLAKE+IEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MLGAADESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNI+EEEQGIISRAV+H
Sbjct: 61 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIMEEEQGIISRAVRH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSI+EKK ++IKNGLP P+FKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED
Sbjct: 121 LFKSIDEKKTSAIKNGLPPPEFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
S GGIYTVGVTTRTVNTE EMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIH+ QTR+C
Sbjct: 181 STGGIYTVGVTTRTVNTEPEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQ D ENA DNK+ISESS MNE
Sbjct: 241 PQTDAENATDNKLISESSPMNE 262
>ref|NP_001034561.1| kinesin-like protein KIF21B [Mus musculus].
Length = 1624
Score = 370 bits (949), Expect = e-102
Identities = 175/238 (73%), Positives = 208/238 (87%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
V+VAVRIRPQL+KE+IEGCHICTSVTPGEPQV LGKDKAFT+D+VFD+D+ QEQIY+ C+
Sbjct: 9 VKVAVRIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQEQIYSTCV 68
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSIEEKK 805
KLIEGCFEGYNATV AYGQTGAGKTYTMGTGFD EEEQGII RA+ HLF+ I+E+K
Sbjct: 69 SKLIEGCFEGYNATVLAYGQTGAGKTYTMGTGFDTVTSEEEQGIIPRAIAHLFRGIDERK 128
Query: 806 HASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTVG 985
+ + G+ P+FKV+AQFLELYNEE+LDLFD+TRD DA++++SNI+IHED+ GGIYT G
Sbjct: 129 RRAQEKGVTGPEFKVSAQFLELYNEEILDLFDSTRDPDARHRRSNIKIHEDANGGIYTTG 188
Query: 986 VTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCPQIDTEN 1159
VT+R +N++ E++QCLK GALSRTTASTQMNVQSSRSHAIFTIHL Q R+C Q D N
Sbjct: 189 VTSRLINSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVN 246
>ref|NP_032472.2| chromosome-associated kinesin KIF4 [Mus musculus].
Length = 1231
Score = 203 bits (517), Expect = 2e-52
Identities = 110/233 (47%), Positives = 149/233 (63%), Gaps = 4/233 (1%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
VRVA+R RP ++KE EGC C S PGEPQV +G DK+FT+D+VFD ++QE+++ +
Sbjct: 10 VRVALRCRPLVSKEIKEGCQTCLSFVPGEPQVVVGNDKSFTYDFVFDPSTEQEEVFNTAV 69
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQ----GIISRAVKHLFKSI 793
LI+G F+GYNATV AYGQTG+GKTY+MG + E+E G+I R ++ LFK I
Sbjct: 70 APLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTA---EQEHDSAIGVIPRVIQLLFKEI 126
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
+K +F + +LE+YNEE+LDL ++R+ K + I I ED GI
Sbjct: 127 NKKSDF---------EFTLKVSYLEIYNEEILDLLCSSRE-----KATQINIREDPKEGI 172
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTR 1132
VG+T +TV S+ + CL+ G SRT AST MN QSSRSHAIFTI + Q +
Sbjct: 173 KIVGLTEKTVLVASDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISIEQRK 225
>ref|NP_780423.2| kinesin-like protein KIF27 [Mus musculus].
Length = 1394
Score = 190 bits (483), Expect = 2e-48
Identities = 96/231 (41%), Positives = 142/231 (61%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E ++VAVRIRP L KE + +C P Q+ +G+D+ FTFD+VF +S Q+++Y
Sbjct: 2 EEIPIKVAVRIRPLLCKEVLHNHQVCVRDIPNTQQIIIGRDRVFTFDFVFGKNSTQDEVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G +++E ++GII RA++ +F+SI
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVASVVEGQKGIIPRAIQEIFQSI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
E PS DFK+ ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 SEN---------PSIDFKIKVSYIEVYKEDLRDL------LELETSMKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
VG V + ++M L++G +R T +TQMN SSRSHAIFTI + Q
Sbjct: 167 VIVGAKECQVESVEDVMSLLQVGNAARHTGTTQMNEHSSRSHAIFTISVCQ 217
>ref|NP_034756.2| kinesin-like protein KIF7 [Mus musculus].
Length = 1347
Score = 169 bits (428), Expect = 4e-42
Identities = 97/236 (41%), Positives = 134/236 (56%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E+ VRVA+R+RP L KE + G C V P ++ LG+D+ F F V D+ QE +Y
Sbjct: 12 EEAPVRVALRVRPLLPKELLHGHQSCLRVEPERGRITLGRDRHFGFHVVLGEDTGQEAVY 71
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
C++ L+E FEG+NATVFAYGQTG+GKTYTMG ++ E+EQGII RA+ FK I
Sbjct: 72 QACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLHEDEQGIIPRAMAEAFKLI 131
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
+E N L D V+ +LELY EE DL ++ +I++ ED G +
Sbjct: 132 DE-------NDL--LDCLVHVSYLELYKEEFRDL------LEVGTASRDIQLREDDRGNV 176
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCP 1141
GV V E++ L++G +R T +T N SSRSH +FT+ L Q P
Sbjct: 177 VLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHFNRLSSRSHTVFTVTLEQRGRTP 232
>ref|NP_001177907.1| kinesin-like protein KIF17 isoform 2 [Mus musculus].
Length = 710
Score = 132 bits (333), Expect = 4e-31
Identities = 83/233 (35%), Positives = 123/233 (52%), Gaps = 7/233 (3%)
Frame = +2
Query: 443 SVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKD-------KAFTFDYVFDIDSQQ 601
SV+V VR RP +ER C +V Q F+ K FTFD + I+
Sbjct: 5 SVKVVVRCRPMNKRERELSCQSVVTVDSARGQCFIQNPGAADEPPKQFTFDGAYYIEHFT 64
Query: 602 EQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHL 781
EQIY + L+EG EGYN T+FAYGQTG+GK++TM D ++GII RA +H+
Sbjct: 65 EQIYNEIAYPLVEGVTEGYNGTIFAYGQTGSGKSFTMQGLPDPPC---QRGIIPRAFEHV 121
Query: 782 FKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDS 961
F+S++ ++ F V A +LE+YNE+V DL + K + + E
Sbjct: 122 FESVQCAENTK---------FLVRASYLEIYNEDVHDLL-------GADTKQRLELKEHP 165
Query: 962 AGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHL 1120
G+Y G++ TV+ ++ + ++ G +R T MN SSRSH+IFTI++
Sbjct: 166 EKGVYVKGLSMHTVHNVAQCERVMETGWKNRAVGYTLMNKDSSRSHSIFTINI 218
>ref|NP_034753.1| kinesin-like protein KIF17 isoform 1 [Mus musculus].
Length = 1038
Score = 132 bits (333), Expect = 4e-31
Identities = 83/233 (35%), Positives = 123/233 (52%), Gaps = 7/233 (3%)
Frame = +2
Query: 443 SVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKD-------KAFTFDYVFDIDSQQ 601
SV+V VR RP +ER C +V Q F+ K FTFD + I+
Sbjct: 5 SVKVVVRCRPMNKRERELSCQSVVTVDSARGQCFIQNPGAADEPPKQFTFDGAYYIEHFT 64
Query: 602 EQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHL 781
EQIY + L+EG EGYN T+FAYGQTG+GK++TM D ++GII RA +H+
Sbjct: 65 EQIYNEIAYPLVEGVTEGYNGTIFAYGQTGSGKSFTMQGLPDPPC---QRGIIPRAFEHV 121
Query: 782 FKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDS 961
F+S++ ++ F V A +LE+YNE+V DL + K + + E
Sbjct: 122 FESVQCAENTK---------FLVRASYLEIYNEDVHDLL-------GADTKQRLELKEHP 165
Query: 962 AGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHL 1120
G+Y G++ TV+ ++ + ++ G +R T MN SSRSH+IFTI++
Sbjct: 166 EKGVYVKGLSMHTVHNVAQCERVMETGWKNRAVGYTLMNKDSSRSHSIFTINI 218
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,138,254
Number of extensions: 937111
Number of successful extensions: 4503
Number of sequences better than 1.0e-05: 63
Number of HSP's gapped: 4349
Number of HSP's successfully gapped: 67
Length of query: 402
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 298
Effective length of database: 12,493,815
Effective search space: 3723156870
Effective search space used: 3723156870
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008612
(1206 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001166936.1| kinesin-like protein KIF21A isoform 4 [Homo ... 495 e-140
Alignment gi|NP_001166935.1| kinesin-like protein KIF21A isoform 1 [Homo ... 495 e-140
Alignment gi|NP_001166934.1| kinesin-like protein KIF21A isoform 3 [Homo ... 495 e-140
Alignment gi|NP_060111.2| kinesin-like protein KIF21A isoform 2 [Homo sap... 495 e-140
Alignment gi|NP_060066.2| kinesin-like protein KIF21B [Homo sapiens]. 366 e-101
Alignment gi|NP_036442.3| chromosome-associated kinesin KIF4A [Homo sapie... 202 4e-52
Alignment gi|NP_001092763.1| chromosome-associated kinesin KIF4B [Homo sa... 199 6e-51
Alignment gi|NP_060046.1| kinesin-like protein KIF27 [Homo sapiens]. 195 8e-50
Alignment gi|NP_940927.2| kinesin-like protein KIF7 [Homo sapiens]. 173 3e-43
Alignment gi|NP_064627.1| kinesin-like protein KIF15 [Homo sapiens]. 136 4e-32
>ref|NP_001166936.1| kinesin-like protein KIF21A isoform 4 [Homo sapiens].
Length = 1621
Score = 495 bits (1275), Expect = e-140
Identities = 244/262 (93%), Positives = 254/262 (96%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
M GAPDESSVRVAVRIRPQLAKE+IEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MLGAPDESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIY QCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNI+EEE GIISRAVKH
Sbjct: 61 QEQIYIQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIVEEELGIISRAVKH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSIEEKKH +IKNGLP+PDFKVNAQFLELYNEEVLDLFDTTRDIDAK+KKSNIRIHED
Sbjct: 121 LFKSIEEKKHIAIKNGLPAPDFKVNAQFLELYNEEVLDLFDTTRDIDAKSKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
S GGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIH+ QTR+C
Sbjct: 181 STGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQID +NA DNK+ISES+QMNE
Sbjct: 241 PQIDADNATDNKIISESAQMNE 262
>ref|NP_001166935.1| kinesin-like protein KIF21A isoform 1 [Homo sapiens].
Length = 1674
Score = 495 bits (1275), Expect = e-140
Identities = 244/262 (93%), Positives = 254/262 (96%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
M GAPDESSVRVAVRIRPQLAKE+IEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MLGAPDESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIY QCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNI+EEE GIISRAVKH
Sbjct: 61 QEQIYIQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIVEEELGIISRAVKH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSIEEKKH +IKNGLP+PDFKVNAQFLELYNEEVLDLFDTTRDIDAK+KKSNIRIHED
Sbjct: 121 LFKSIEEKKHIAIKNGLPAPDFKVNAQFLELYNEEVLDLFDTTRDIDAKSKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
S GGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIH+ QTR+C
Sbjct: 181 STGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQID +NA DNK+ISES+QMNE
Sbjct: 241 PQIDADNATDNKIISESAQMNE 262
>ref|NP_001166934.1| kinesin-like protein KIF21A isoform 3 [Homo sapiens].
Length = 1637
Score = 495 bits (1275), Expect = e-140
Identities = 244/262 (93%), Positives = 254/262 (96%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
M GAPDESSVRVAVRIRPQLAKE+IEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MLGAPDESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIY QCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNI+EEE GIISRAVKH
Sbjct: 61 QEQIYIQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIVEEELGIISRAVKH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSIEEKKH +IKNGLP+PDFKVNAQFLELYNEEVLDLFDTTRDIDAK+KKSNIRIHED
Sbjct: 121 LFKSIEEKKHIAIKNGLPAPDFKVNAQFLELYNEEVLDLFDTTRDIDAKSKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
S GGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIH+ QTR+C
Sbjct: 181 STGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQID +NA DNK+ISES+QMNE
Sbjct: 241 PQIDADNATDNKIISESAQMNE 262
>ref|NP_060111.2| kinesin-like protein KIF21A isoform 2 [Homo sapiens].
Length = 1661
Score = 495 bits (1275), Expect = e-140
Identities = 244/262 (93%), Positives = 254/262 (96%)
Frame = +2
Query: 419 MWGAPDESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 598
M GAPDESSVRVAVRIRPQLAKE+IEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ
Sbjct: 1 MLGAPDESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQ 60
Query: 599 QEQIYTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKH 778
QEQIY QCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNI+EEE GIISRAVKH
Sbjct: 61 QEQIYIQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIVEEELGIISRAVKH 120
Query: 779 LFKSIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHED 958
LFKSIEEKKH +IKNGLP+PDFKVNAQFLELYNEEVLDLFDTTRDIDAK+KKSNIRIHED
Sbjct: 121 LFKSIEEKKHIAIKNGLPAPDFKVNAQFLELYNEEVLDLFDTTRDIDAKSKKSNIRIHED 180
Query: 959 SAGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMC 1138
S GGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIH+ QTR+C
Sbjct: 181 STGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVC 240
Query: 1139 PQIDTENAIDNKVISESSQMNE 1204
PQID +NA DNK+ISES+QMNE
Sbjct: 241 PQIDADNATDNKIISESAQMNE 262
>ref|NP_060066.2| kinesin-like protein KIF21B [Homo sapiens].
Length = 1624
Score = 366 bits (939), Expect = e-101
Identities = 174/238 (73%), Positives = 206/238 (86%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
V+VAVRIRPQL+KE+IEGCHICTSVTPGEPQV LGKDKAFT+D+VFD+D+ QEQIY+ C+
Sbjct: 9 VKVAVRIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQEQIYSTCV 68
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSIEEKK 805
KLIEGCFEGYNATV AYGQTGAGKTYTMGTGFD+ EEEQGII RA+ HLF I E+K
Sbjct: 69 SKLIEGCFEGYNATVLAYGQTGAGKTYTMGTGFDMATSEEEQGIIPRAIAHLFGGIAERK 128
Query: 806 HASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTVG 985
+ + G+ P+FKV+AQFLELYNEE+LDLFD+TRD D ++++SNI+IHED+ GGIYT G
Sbjct: 129 RRAQEQGVAGPEFKVSAQFLELYNEEILDLFDSTRDPDTRHRRSNIKIHEDANGGIYTTG 188
Query: 986 VTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCPQIDTEN 1159
VT+R ++++ E++QCLK GALSRTTASTQMNVQSSRSHAIFTIHL Q RMC Q D N
Sbjct: 189 VTSRLIHSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRMCTQPDLVN 246
>ref|NP_036442.3| chromosome-associated kinesin KIF4A [Homo sapiens].
Length = 1232
Score = 202 bits (515), Expect = 4e-52
Identities = 109/230 (47%), Positives = 146/230 (63%), Gaps = 1/230 (0%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
VRVA+R RP + KE EGC +C S PGEPQV +G DK+FT+D+VFD ++QE+++ +
Sbjct: 10 VRVALRCRPLVPKEISEGCQMCLSFVPGEPQVVVGTDKSFTYDFVFDPSTEQEEVFNTAV 69
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQ-GIISRAVKHLFKSIEEK 802
LI+G F+GYNATV AYGQTG+GKTY+MG + E G+I R ++ LFK I++K
Sbjct: 70 APLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVIQLLFKEIDKK 129
Query: 803 KHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTV 982
+F + +LE+YNEE+LDL +R+ K+ I I ED GI V
Sbjct: 130 SDF---------EFTLKVSYLEIYNEEILDLLCPSRE------KAQINIREDPKEGIKIV 174
Query: 983 GVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTR 1132
G+T +TV + + CL+ G SRT AST MN QSSRSHAIFTI L Q +
Sbjct: 175 GLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISLEQRK 224
>ref|NP_001092763.1| chromosome-associated kinesin KIF4B [Homo sapiens].
Length = 1234
Score = 199 bits (505), Expect = 6e-51
Identities = 108/230 (46%), Positives = 146/230 (63%), Gaps = 1/230 (0%)
Frame = +2
Query: 446 VRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYTQCI 625
VRVA+R RP + KE EGC +C S PGE QV +G DK+FT+D+VFD ++QE+++ + +
Sbjct: 10 VRVALRCRPLVPKEISEGCQMCLSFVPGETQVVVGTDKSFTYDFVFDPCTEQEEVFNKAV 69
Query: 626 EKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQ-GIISRAVKHLFKSIEEK 802
LI+G F+GYNATV AYGQTG+GKTY+MG + E GII R ++ LFK I++K
Sbjct: 70 APLIKGIFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGIIPRVIQLLFKEIDKK 129
Query: 803 KHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGIYTV 982
+F + +LE+YNEE+LDL +R+ K+ I I ED GI V
Sbjct: 130 SDF---------EFTLKVSYLEIYNEEILDLLCPSRE------KAQINIREDPKEGIKIV 174
Query: 983 GVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTR 1132
G+T +TV + + CL+ G SRT AST MN QSSRSHAIFTI + Q +
Sbjct: 175 GLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISIEQRK 224
>ref|NP_060046.1| kinesin-like protein KIF27 [Homo sapiens].
Length = 1401
Score = 195 bits (495), Expect = 8e-50
Identities = 100/231 (43%), Positives = 142/231 (61%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E V+VAVRIRP L KE + +C V P QV +G+D+ FTFD+VF +S Q+++Y
Sbjct: 2 EEIPVKVAVRIRPLLCKEALHNHQVCVRVIPNSQQVIIGRDRVFTFDFVFGKNSTQDEVY 61
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
CI+ L+ EGYNATVFAYGQTG+GKTYT+G G +++E ++GII RA++ +F+SI
Sbjct: 62 NTCIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHIASVVEGQKGIIPRAIQEIFQSI 121
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
E PS DF V ++E+Y E++ DL ++ + ++ I ED G
Sbjct: 122 SEH---------PSIDFNVKVSYIEVYKEDLRDL------LELETSMKDLHIREDEKGNT 166
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQ 1126
VG V + E+M L++G +R T +TQMN SSRSHAIFTI + Q
Sbjct: 167 VIVGAKECHVESAGEVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISICQ 217
>ref|NP_940927.2| kinesin-like protein KIF7 [Homo sapiens].
Length = 1343
Score = 173 bits (438), Expect = 3e-43
Identities = 97/236 (41%), Positives = 137/236 (58%)
Frame = +2
Query: 434 DESSVRVAVRIRPQLAKERIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIY 613
+E+ VRVA+R+RP L KE + G C V PG +V LG+D+ F F V D+ QE +Y
Sbjct: 12 EEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLGRDRHFGFHVVLAEDAGQEAVY 71
Query: 614 TQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIIEEEQGIISRAVKHLFKSI 793
C++ L+E FEG+NATVFAYGQTG+GKTYTMG +++E+EQGI+ RA+ FK I
Sbjct: 72 QACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLI 131
Query: 794 EEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAGGI 973
+E N L D V+ +LE+Y EE DL ++ +I++ ED G +
Sbjct: 132 DE-------NDL--LDCLVHVSYLEVYKEEFRDL------LEVGTASRDIQLREDERGNV 176
Query: 974 YTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCP 1141
GV V E++ L++G +R T +T +N SSRSH +FT+ L Q P
Sbjct: 177 VLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAP 232
>ref|NP_064627.1| kinesin-like protein KIF15 [Homo sapiens].
Length = 1388
Score = 136 bits (342), Expect = 4e-32
Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 5/240 (2%)
Frame = +2
Query: 443 SVRVAVRIRPQLAKE-RIEG-CHICTSVTPGEPQVFLG--KDKAFTFDYVFDIDSQQEQI 610
+++V VRIRP + +G ++C SV + K FTFD+V D+D+ QE +
Sbjct: 26 AIKVFVRIRPPAERSGSADGEQNLCLSVLSSTSLRLHSNPEPKTFTFDHVADVDTTQESV 85
Query: 611 YTQCIEKLIEGCFEGYNATVFAYGQTGAGKTYT-MGTGFDVNIIEEEQGIISRAVKHLFK 787
+ + ++E C GYN T+FAYGQTG+GKT+T MG N +G+I R+ ++LF
Sbjct: 86 FATVAKSIVESCMSGYNGTIFAYGQTGSGKTFTMMGPSESDNFSHNLRGVIPRSFEYLFS 145
Query: 788 SIEEKKHASIKNGLPSPDFKVNAQFLELYNEEVLDLFDTTRDIDAKNKKSNIRIHEDSAG 967
I+ +K K G F F+E+YNE++ DL D+ + + + E
Sbjct: 146 LIDREKE---KAG-AGKSFLCKCSFIEIYNEQIYDLLDSA--------SAGLYLREHIKK 193
Query: 968 GIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHLSQTRMCPQI 1147
G++ VG + V + +E Q L G +R AST MN +SSRSHA+FTI + +I
Sbjct: 194 GVFVVGAVEQVVTSAAEAYQVLSGGWRNRRVASTSMNRESSRSHAVFTITIESMEKSNEI 253
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,905,665
Number of extensions: 1119531
Number of successful extensions: 5787
Number of sequences better than 1.0e-05: 62
Number of HSP's gapped: 5620
Number of HSP's successfully gapped: 64
Length of query: 402
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 297
Effective length of database: 14,835,944
Effective search space: 4406275368
Effective search space used: 4406275368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008612
(1206 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 440 e-121
>Sscrofa_Chr05
|| Length = 111506441
Score = 440 bits (222), Expect = e-121
Identities = 225/226 (99%)
Strand = Plus / Minus
Query: 460 cagaataagaccacagcttgccaaagaaaggattgaaggatgccatatttgtacatctgt 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73520525 cagaataagaccacagcttgccaaagaaaggattgaaggatgccatatttgtacatctgt 73520466
Query: 520 cacaccaggagaacctcaagtcttcctagggaaagataaagctttcacttttgattatgt 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73520465 cacaccaggagaacctcaagtcttcctagggaaagataaagctttcacttttgattatgt 73520406
Query: 580 gtttgacattgactcccagcaagagcagatttacactcagtgtatagaaaaactaattga 639
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 73520405 gtttgacattgactcccagcaagagcagatatacactcagtgtatagaaaaactaattga 73520346
Query: 640 aggttgttttgaaggatataatgctacagtttttgcctatggacaa 685
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73520345 aggttgttttgaaggatataatgctacagtttttgcctatggacaa 73520300
Score = 428 bits (216), Expect = e-117
Identities = 216/216 (100%)
Strand = Plus / Minus
Query: 247 tcagcgccgccgccacctttccattcagtcgcccaacatggctggagcgcggcggaggtg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73586138 tcagcgccgccgccacctttccattcagtcgcccaacatggctggagcgcggcggaggtg 73586079
Query: 307 agcctgctgtcccctgacgctccagcctcctgcgcccgagcgccgcggctgcggcggcgc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73586078 agcctgctgtcccctgacgctccagcctcctgcgcccgagcgccgcggctgcggcggcgc 73586019
Query: 367 ctcagttcggcggtgcggaggcccaggggcccggttgtagctcagcgccggcatgtgggg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73586018 ctcagttcggcggtgcggaggcccaggggcccggttgtagctcagcgccggcatgtgggg 73585959
Query: 427 cgccccggacgagagctcggtgcgagtggctgtcag 462
||||||||||||||||||||||||||||||||||||
Sbjct: 73585958 cgccccggacgagagctcggtgcgagtggctgtcag 73585923
Score = 315 bits (159), Expect = 3e-83
Identities = 175/183 (95%)
Strand = Plus / Minus
Query: 686 actggagctggcaaaacatatacaatgggaacaggatttgatgttaacatcattgaggaa 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73520169 actggagctggcaaaacatatacaatgggaacaggatttgatgttaacatcattgaggaa 73520110
Query: 746 gaacagggtattatttctcgtgctgttaaacaccttttcaagagtattgaagnnnnnnnn 805
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73520109 gaacagggtattatttctcgtgctgttaaacaccttttcaagagtattgaagaaaaaaaa 73520050
Query: 806 catgcttcaattaaaaatggacttccttctccagattttaaagtcaatgcccaattctta 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73520049 catgcttcaattaaaaatggacttccttctccagattttaaagtcaatgcccaattctta 73519990
Query: 866 gag 868
|||
Sbjct: 73519989 gag 73519987
Score = 274 bits (138), Expect = 1e-70
Identities = 138/138 (100%)
Strand = Plus / Minus
Query: 1017 agatgatgcagtgtttgaagctgggtgctttatcccggaccactgccagtacccaaatga 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73517796 agatgatgcagtgtttgaagctgggtgctttatcccggaccactgccagtacccaaatga 73517737
Query: 1077 atgtccagagctctcgttcacatgccatttttaccattcacttgtctcaaaccagaatgt 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73517736 atgtccagagctctcgttcacatgccatttttaccattcacttgtctcaaaccagaatgt 73517677
Query: 1137 gtccacaaatagatactg 1154
||||||||||||||||||
Sbjct: 73517676 gtccacaaatagatactg 73517659
Score = 224 bits (113), Expect = 9e-56
Identities = 139/152 (91%)
Strand = Plus / Minus
Query: 867 agctatataatgaagaggttcttgacttatttgataccactcgtgatattgatgcnnnnn 926
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73518642 agctatataatgaagaggttcttgacttatttgataccactcgtgatattgatgcaaaaa 73518583
Query: 927 nnnnnnnntcaaatataaggattcatgaagattcagctggtggaatttatactgtgggcg 986
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73518582 ataaaaaatcaaatataaggattcatgaagattcagctggtggaatttatactgtgggcg 73518523
Query: 987 tcacaacacgtactgtgaatacagaatcagag 1018
||||||||||||||||||||||||||||||||
Sbjct: 73518522 tcacaacacgtactgtgaatacagaatcagag 73518491
Score = 105 bits (53), Expect = 6e-20
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 1154 gagaatgcaattgataataaggtgatttctgaatcatcacagatgaatgaatt 1206
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73517158 gagaatgcaattgataataaggtgatttctgaatcatcacagatgaatgaatt 73517106
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 32,724,309
Number of extensions: 254
Number of successful extensions: 254
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 254
Number of HSP's successfully gapped: 8
Length of query: 1206
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1185
Effective length of database: 2,808,413,156
Effective search space: 3327969589860
Effective search space used: 3327969589860
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)