Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008615
(1366 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001015651.1| glutathione S-transferase A4 [Bos taurus]. 442 e-124
Alignment gi|NP_001070580.1| glutathione S-transferase A4 [Bos taurus]. 269 4e-72
Alignment gi|NP_001071617.1| glutathione S-transferase A1 [Bos taurus]. 248 1e-65
Alignment gi|NP_001092486.1| glutathione S-transferase A5 [Bos taurus]. 234 2e-61
Alignment gi|NP_803481.1| glutathione S-transferase A2 [Bos taurus]. 223 2e-58
Alignment gi|NP_803482.1| glutathione S-transferase P [Bos taurus]. 80 5e-15
Alignment gi|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-l... 76 8e-14
Alignment gi|XP_604297.3| PREDICTED: glutathione S-transferase, pi 1-like... 76 8e-14
>ref|NP_001015651.1| glutathione S-transferase A4 [Bos taurus].
Length = 222
Score = 442 bits (1136), Expect = e-124
Identities = 219/222 (98%), Positives = 221/222 (99%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI
Sbjct: 1 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLEL+IMHPFLKPDDQQKE
Sbjct: 61 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKE 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
V NMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH
Sbjct: 121 VANMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 773
LQE+TVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP
Sbjct: 181 LQEYTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 222
>ref|NP_001070580.1| glutathione S-transferase A4 [Bos taurus].
Length = 222
Score = 269 bits (688), Expect = 4e-72
Identities = 133/219 (60%), Positives = 170/219 (77%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKL Y +GRGRMES+RW+LAAAGVEF+EEFLET+EQ +KLQ LLF QVP+VEI
Sbjct: 1 MAAKPKLWYFHGRGRMESIRWLLAAAGVEFEEEFLETREQYEKLQKDGRLLFGQVPLVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGM+L QTR+IL Y+A K++L GKDLKE IDMY +GTLDL+ ++ + F P+++++
Sbjct: 61 DGMELTQTRAILSYLAAKYNLHGKDLKETVRIDMYADGTLDLMLMVALAAFKHPEEKEES 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ +KA RYFPVFEK+L+ HG+ FLVGN+ S ADI LL+ IL +EE ++LS FP
Sbjct: 121 LALAVKKAKTRYFPVFEKILKDHGEDFLVGNKFSWADIQLLEVILTMEELDASVLSDFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNI 764
L+EF +ISNIPTIKKFL+PGS++KPPPD YV V NI
Sbjct: 181 LKEFKTRISNIPTIKKFLQPGSQRKPPPDSHYVEVVRNI 219
>ref|NP_001071617.1| glutathione S-transferase A1 [Bos taurus].
Length = 222
Score = 248 bits (632), Expect = 1e-65
Identities = 120/220 (54%), Positives = 162/220 (73%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LHY NGRGRME +RW+LAAAGVEF+E+F+E E L KL++ L+FQQVPMVEI
Sbjct: 1 MAGKPTLHYFNGRGRMECIRWLLAAAGVEFEEKFIEKPEDLDKLKNDGSLMFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K++L+GKD+KER LIDMY EG DL E+I+ P P ++ +
Sbjct: 61 DGMKLVQTRAILNYIATKYNLYGKDMKERALIDMYSEGVADLGEMIMHFPLCPPAEKDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + +K RY P FE VL+ HGQ +LVGN+LS ADI L++ + +EE P++L+ FP
Sbjct: 121 LTLIREKTTNRYLPAFENVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDPSLLANFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ ++SNIP +KKFL+PGS++KPP D+ + +F
Sbjct: 181 LKALKARVSNIPAVKKFLQPGSQRKPPTDEKKIEEARKVF 220
>ref|NP_001092486.1| glutathione S-transferase A5 [Bos taurus].
Length = 222
Score = 234 bits (596), Expect = 2e-61
Identities = 115/220 (52%), Positives = 159/220 (72%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY + RGRME++RW+LAAAG EF+E+ +E+ E L KL+ L+FQQVPMVEI
Sbjct: 1 MAGKPKLHYFDARGRMEAIRWLLAAAGAEFEEKLIESSEDLDKLRYDGSLVFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K+ L+GKD+KER LIDMY EG DL E+I++ P PD + +
Sbjct: 61 DGMKLVQTRAILNYIATKYDLYGKDMKERALIDMYTEGVADLGEMIMLLPLCPPDQKNTK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + ++A RY P FE VL+ H Q +LVGN+LS ADI L++ + +EE P++L+ FP
Sbjct: 121 LTLIQERATNRYLPAFENVLKSHRQDYLVGNKLSKADIHLVELLYYVEELDPSLLANFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ ++SN+P +KKFL+PGS++K P + + IF
Sbjct: 181 LKGLKTRVSNLPAVKKFLQPGSQRKLPGGEKSLERARKIF 220
>ref|NP_803481.1| glutathione S-transferase A2 [Bos taurus].
Length = 222
Score = 223 bits (569), Expect = 2e-58
Identities = 113/223 (50%), Positives = 154/223 (69%), Gaps = 3/223 (1%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY NGRGRME +RW+LAAAGVEF+E+F+E E L KL++ L+FQQVPMVEI
Sbjct: 1 MAGKPKLHYFNGRGRMECIRWLLAAAGVEFEEKFIEQPEDLDKLRNDGSLMFQQVPMVEI 60
Query: 288 DGMKLVQTR---SILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQ 458
DGM + + H I HL+GKD+KER LIDMY EG DL E+I+ P PD +
Sbjct: 61 DGMSWCRPEPFSTTCHQI----HLYGKDMKERALIDMYSEGVEDLGEMIMHLPLCPPDQK 116
Query: 459 QKEVVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSA 638
++ + ++ RYFP FEKVL+ HGQ +LVGN+LS ADI L++ + +EE P++L+
Sbjct: 117 DAKIAQIKERTTNRYFPAFEKVLKNHGQDYLVGNKLSKADIHLVELLYYVEELDPSLLAN 176
Query: 639 FPHLQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
FP L+ ++S++P +KKFL+PGS++KPP D+ + IF
Sbjct: 177 FPLLKGLKARVSSLPAVKKFLQPGSQRKPPMDEKNLEEAKRIF 219
>ref|NP_803482.1| glutathione S-transferase P [Bos taurus].
Length = 210
Score = 79.7 bits (195), Expect = 5e-15
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Frame = +3
Query: 144 RGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQTRSIL 323
+GR E++R +LA G + EE + + LQ + L+ Q+P + + L Q+ +IL
Sbjct: 12 QGRCEAMRMLLADQGQSWKEEVVAMQSWLQGPLKAS-CLYGQLPKFQDGDLTLYQSNAIL 70
Query: 324 HYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKEVVNMAQKAIIRY 503
++ L+GKD +E L+DM +G DL + + + +++ V KA+ ++
Sbjct: 71 RHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYVSLIYTNYEAGKEDYV----KALPQH 126
Query: 504 FPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHLQEFTVKISN 677
FE +L + GQ F+VG+Q+S AD LL + + P+ L +FP L + ++++
Sbjct: 127 LKPFETLLSQNKGGQAFIVGDQISFADYNLLDLLRIHQVLAPSCLDSFPLLSAYVARLNS 186
Query: 678 IPTIKKFL 701
P +K FL
Sbjct: 187 RPKLKAFL 194
>ref|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 75.9 bits (185), Expect = 8e-14
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Frame = +3
Query: 126 LHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLV 305
+++P RGR E++R +LA + EE + + LQ + L+ Q+P + + L
Sbjct: 28 VYFPT-RGRCEALRMLLADQDQSWKEEVVTKESWLQGPLKAS-CLYGQLPKFQDGDLTLY 85
Query: 306 QTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLEL---IIMHPFLKPDDQQKEVVN 476
Q+ +IL ++ L+G D +E L+DM +G DL +I H ++++
Sbjct: 86 QSNAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLIHHK------REEDKAQ 139
Query: 477 MAQKAIIRYFPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHL 650
Q+ + P FE +L + GQ F+VG+Q+S AD LL +L + +P L FP L
Sbjct: 140 YVQELPVHLQP-FETLLSQNQGGQAFIVGDQISFADYNLLDLLLNHQVLVPGCLDPFPLL 198
Query: 651 QEFTVKISNIPTIKKFL 701
+ ++S P +K FL
Sbjct: 199 SAYVARLSARPKLKAFL 215
>ref|XP_604297.3| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 75.9 bits (185), Expect = 8e-14
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Frame = +3
Query: 126 LHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLV 305
+++P RGR E++R +LA + EE + + LQ + L+ Q+P + + L
Sbjct: 28 VYFPT-RGRCEALRMLLADQDQSWKEEVVTKESWLQGPLKAS-CLYGQLPKFQDGDLTLY 85
Query: 306 QTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLEL---IIMHPFLKPDDQQKEVVN 476
Q+ +IL ++ L+G D +E L+DM +G DL +I H ++++
Sbjct: 86 QSNAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLIHHK------REEDKAQ 139
Query: 477 MAQKAIIRYFPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHL 650
Q+ + P FE +L + GQ F+VG+Q+S AD LL +L + +P L FP L
Sbjct: 140 YVQELPVHLQP-FETLLSQNQGGQAFIVGDQISFADYNLLDLLLNHQVLVPGCLDPFPLL 198
Query: 651 QEFTVKISNIPTIKKFL 701
+ ++S P +K FL
Sbjct: 199 SAYVARLSARPKLKAFL 215
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 52,260,308
Number of extensions: 1415710
Number of successful extensions: 4254
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 4245
Number of HSP's successfully gapped: 8
Length of query: 455
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 349
Effective length of database: 14,174,046
Effective search space: 4946742054
Effective search space used: 4946742054
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008615
(1366 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_866312.1| PREDICTED: similar to glutathione S-transferase... 439 e-123
Alignment gi|XP_532174.1| PREDICTED: similar to glutathione S-transferase... 439 e-123
Alignment gi|XP_535577.1| PREDICTED: similar to glutathione S-transferase... 435 e-122
Alignment gi|XP_852870.1| PREDICTED: similar to Glutathione S-transferase... 263 3e-70
Alignment gi|XP_538962.1| PREDICTED: similar to Glutathione S-transferase... 257 2e-68
Alignment gi|XP_532173.1| PREDICTED: similar to Glutathione S-transferase... 254 1e-67
Alignment gi|XP_848302.1| PREDICTED: similar to glutathione S-transferase... 233 2e-63
Alignment gi|XP_856069.1| PREDICTED: similar to glutathione S-transferase... 164 2e-40
Alignment gi|XP_855742.1| PREDICTED: similar to glutathione S-transferase... 162 5e-40
Alignment gi|XP_537961.2| PREDICTED: similar to Glutathione S-transferase... 85 1e-16
>ref|XP_866312.1| PREDICTED: similar to glutathione S-transferase A4 isoform 2 [Canis
familiaris].
Length = 222
Score = 439 bits (1130), Expect = e-123
Identities = 219/222 (98%), Positives = 220/222 (99%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI
Sbjct: 1 MAAKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTRSILHYIADKHHLFG+DLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE
Sbjct: 61 DGMKLVQTRSILHYIADKHHLFGRDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
VVNMAQKAIIRYFPVFEKVLR HGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH
Sbjct: 121 VVNMAQKAIIRYFPVFEKVLRDHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 773
LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP
Sbjct: 181 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 222
>ref|XP_532174.1| PREDICTED: similar to glutathione S-transferase A4 isoform 1 [Canis
familiaris].
Length = 222
Score = 439 bits (1130), Expect = e-123
Identities = 219/222 (98%), Positives = 220/222 (99%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI
Sbjct: 1 MAAKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTRSILHYIADKHHLFG+DLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE
Sbjct: 61 DGMKLVQTRSILHYIADKHHLFGRDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
VVNMAQKAIIRYFPVFEKVLR HGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH
Sbjct: 121 VVNMAQKAIIRYFPVFEKVLRDHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 773
LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP
Sbjct: 181 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 222
>ref|XP_535577.1| PREDICTED: similar to glutathione S-transferase A4 isoform 1 [Canis
familiaris].
Length = 222
Score = 435 bits (1118), Expect = e-122
Identities = 216/222 (97%), Positives = 218/222 (98%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHYPNGRGRMES+RWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE
Sbjct: 1 MAVKPKLHYPNGRGRMESIRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVET 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTRSILHYIADKHHLFG+DLKERTLIDMYVEG LDLLELIIMHPFLKPDDQQKE
Sbjct: 61 DGMKLVQTRSILHYIADKHHLFGRDLKERTLIDMYVEGMLDLLELIIMHPFLKPDDQQKE 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
VVNMAQKAIIRYFPVFEKVLR HGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH
Sbjct: 121 VVNMAQKAIIRYFPVFEKVLRDHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 773
LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP
Sbjct: 181 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 222
>ref|XP_852870.1| PREDICTED: similar to Glutathione S-transferase 5.7 (GST 5.7) (GST
class-alpha) (GST A4-4) (GSTA4-4) [Canis familiaris].
Length = 244
Score = 263 bits (672), Expect = 3e-70
Identities = 132/220 (60%), Positives = 168/220 (76%)
Frame = +3
Query: 105 MMATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE 284
+MATKPKL+Y GRGRMES+RW+LAAAGVEF+EEF+ET EQ +KLQ LLF QVPM+E
Sbjct: 22 VMATKPKLYYFRGRGRMESIRWLLAAAGVEFEEEFIETAEQYEKLQKDGRLLFGQVPMIE 81
Query: 285 IDGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQK 464
IDGM L QTR+IL Y+A K+ L+GKDLKE I+MY +GTLDL+ +I + F P ++++
Sbjct: 82 IDGMVLTQTRAILSYLAAKYDLYGKDLKETVRINMYADGTLDLMLMIALAAFKPPAEKEE 141
Query: 465 EVVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFP 644
+ + QKA RYFPVFEK+L+ HGQ FLVGN+ S ADI LL+ IL +EE ++LS F
Sbjct: 142 SLAVVVQKAQTRYFPVFEKILKDHGQDFLVGNKFSWADIQLLEAILMVEELNASVLSDFR 201
Query: 645 HLQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNI 764
LQ F +ISNIPTIKKFL+PGS+++PPPD YV V +I
Sbjct: 202 LLQAFKTRISNIPTIKKFLQPGSQRQPPPDSHYVEVVRSI 241
>ref|XP_538962.1| PREDICTED: similar to Glutathione S-transferase 5.7 (GST 5.7) (GST
class-alpha) (GST A4-4) (GSTA4-4) [Canis familiaris].
Length = 238
Score = 257 bits (657), Expect = 2e-68
Identities = 124/220 (56%), Positives = 170/220 (77%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY NGRGRMES+RW+LAAAGVEF+EE ET+E+ +KL G L+++QVPMVEI
Sbjct: 1 MAGKPKLHYFNGRGRMESIRWLLAAAGVEFEEELFETREEFEKLIQGGTLMYEQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGM LV+TR+IL Y+A K++L+G++++E+ IDMYVEG DL ++I+ P P +++
Sbjct: 61 DGMNLVETRAILRYLAAKYNLYGRNIQEQAWIDMYVEGLKDLSDMIMFFPLSLPGEKEMN 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + ++A ++FPV+EK LR HGQ FLVGN+LS ADI LL+ IL EE P++L+ FP
Sbjct: 121 LEYILERATTKFFPVYEKALRDHGQDFLVGNRLSWADIQLLEVILMAEECKPSVLTGFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
LQEF +IS IPTI+KFL+PGS++KPP D+ + +V NIF
Sbjct: 181 LQEFKARISYIPTIQKFLQPGSQRKPPLDESSIESVKNIF 220
>ref|XP_532173.1| PREDICTED: similar to Glutathione S-transferase A3-3 (GST
class-alpha) [Canis familiaris].
Length = 223
Score = 254 bits (650), Expect = 1e-67
Identities = 123/220 (55%), Positives = 167/220 (75%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY NGRGRMES+RW+LA+AGVEF+E+F+ T E L KL++ L+FQQVPMVEI
Sbjct: 1 MAGKPKLHYFNGRGRMESIRWLLASAGVEFEEKFINTPEDLDKLKNDGSLMFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K++L+GKD+KER LIDMY EG +DL E+I++ P PD + +
Sbjct: 61 DGMKLVQTRAILNYIATKYNLYGKDIKERALIDMYTEGIVDLNEMIMVLPLCPPDQKDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + ++ RY PVFEKVL+ HGQ +LVGN+LS ADI L++ + +EE ++L+ FP
Sbjct: 121 ITLIRERTTDRYLPVFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLLANFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ ++SN+PT+KKFL+PGS +KPP D+ + IF
Sbjct: 181 LKALKTRVSNLPTVKKFLQPGSPRKPPLDEKSLEQAKKIF 220
>ref|XP_848302.1| PREDICTED: similar to glutathione S-transferase A4 isoform 1 [Canis
familiaris].
Length = 128
Score = 233 bits (595), Expect(2) = 2e-63
Identities = 113/120 (94%), Positives = 116/120 (96%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE
Sbjct: 1 MAAKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVET 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGM LVQTRSILHYIADKHHLFG+DLKERTLIDMYVEGTLDLLELI MHPFLKPDDQQ++
Sbjct: 61 DGMNLVQTRSILHYIADKHHLFGRDLKERTLIDMYVEGTLDLLELISMHPFLKPDDQQRK 120
Score = 28.9 bits (63), Expect(2) = 2e-63
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 460 KRKWLTWPRRL 492
+RKWLTWPRRL
Sbjct: 118 QRKWLTWPRRL 128
>ref|XP_856069.1| PREDICTED: similar to glutathione S-transferase A4 isoform 2 [Canis
familiaris].
Length = 119
Score = 164 bits (415), Expect = 2e-40
Identities = 82/104 (78%), Positives = 91/104 (87%)
Frame = +3
Query: 153 MESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYI 332
MES+RWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE DGMKLVQTRSILHYI
Sbjct: 1 MESIRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVETDGMKLVQTRSILHYI 60
Query: 333 ADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQK 464
ADKHHLFG+DLKERTLIDMY T+ + + + FL+P ++K
Sbjct: 61 ADKHHLFGRDLKERTLIDMYF--TVKISNIPTIKKFLEPGSKKK 102
Score = 84.7 bits (208), Expect = 2e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 657 FTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 773
FTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP
Sbjct: 81 FTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 119
>ref|XP_855742.1| PREDICTED: similar to glutathione S-transferase A4 isoform 2 [Canis
familiaris].
Length = 119
Score = 162 bits (411), Expect = 5e-40
Identities = 82/104 (78%), Positives = 90/104 (86%)
Frame = +3
Query: 153 MESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYI 332
MESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE DGM LVQTRSILHYI
Sbjct: 1 MESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVETDGMNLVQTRSILHYI 60
Query: 333 ADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQK 464
ADKHHLFG+DLKERTLIDMY T+ + + + FL+P ++K
Sbjct: 61 ADKHHLFGRDLKERTLIDMYF--TVKISNIPTIKKFLEPGSKKK 102
Score = 80.9 bits (198), Expect = 3e-15
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +3
Query: 657 FTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 773
FTVKISNIPTIKKFLEPGSKKKPP DDIYVRTVYNIFMP
Sbjct: 81 FTVKISNIPTIKKFLEPGSKKKPPLDDIYVRTVYNIFMP 119
>ref|XP_537961.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 231
Score = 85.1 bits (209), Expect = 1e-16
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Frame = +3
Query: 144 RGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQTRSIL 323
RGR E++R +LA G + EE + T E K L+ Q+P + + L Q+ +IL
Sbjct: 33 RGRCEAMRMLLADQGQSWKEEVV-TMETWMKGSLKASCLYGQLPKFQDGDLTLYQSNAIL 91
Query: 324 HYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKEVVNMAQKAIIRY 503
++ L+GKD +E L+D+ +G DL + + + ++E V KA+ Y
Sbjct: 92 RHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYTNYEAGKEEYV----KALPGY 147
Query: 504 FPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHLQEFTVKISN 677
FE +L + GQ F+VGNQ+S AD LL +L + P+ L +FP L + ++S
Sbjct: 148 LKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLSAYVARLSA 207
Query: 678 IPTIKKFL 701
P +K FL
Sbjct: 208 RPKLKAFL 215
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 54,484,945
Number of extensions: 1450791
Number of successful extensions: 4437
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 4419
Number of HSP's successfully gapped: 22
Length of query: 455
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 349
Effective length of database: 15,340,888
Effective search space: 5353969912
Effective search space used: 5353969912
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008615
(1366 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230308.1| glutathione S-transferase A4 [Sus scrofa]. 447 e-126
Alignment gi|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like... 264 8e-71
Alignment gi|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like... 264 8e-71
Alignment gi|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa]. 254 1e-67
Alignment gi|NP_999015.1| glutathione S-transferase A2 [Sus scrofa]. 253 2e-67
Alignment gi|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like... 243 2e-64
Alignment gi|XP_003128842.2| PREDICTED: glutathione S-transferase alpha M... 154 8e-38
Alignment gi|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-lik... 87 2e-17
Alignment gi|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D syn... 62 1e-09
Alignment gi|XP_001926158.3| PREDICTED: maleylacetoacetate isomerase-like... 49 7e-06
>ref|NP_001230308.1| glutathione S-transferase A4 [Sus scrofa].
Length = 223
Score = 447 bits (1150), Expect = e-126
Identities = 223/223 (100%), Positives = 223/223 (100%)
Frame = +3
Query: 105 MMATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE 284
MMATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE
Sbjct: 1 MMATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE 60
Query: 285 IDGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQK 464
IDGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQK
Sbjct: 61 IDGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQK 120
Query: 465 EVVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFP 644
EVVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFP
Sbjct: 121 EVVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFP 180
Query: 645 HLQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 773
HLQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP
Sbjct: 181 HLQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 223
>ref|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 264 bits (675), Expect = 8e-71
Identities = 130/219 (59%), Positives = 168/219 (76%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKL+Y GRGRMES+RW+LAAAGVEF+EEF ET+EQ +KL+ LLF QVP+VEI
Sbjct: 1 MAAKPKLYYFRGRGRMESIRWLLAAAGVEFEEEFFETREQYEKLKKDGLLLFGQVPLVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGM L QTR+IL Y+A K++L GKDLKER IDMY +GTLDL+ ++ + F P ++++
Sbjct: 61 DGMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEEN 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + +KA RYFPVFEK+L+ G+ FLVGN+ S ADI LL+ IL +EE ++LS FP
Sbjct: 121 LALVVEKAKTRYFPVFEKILKDQGEDFLVGNKFSWADIQLLEAILMMEELDASVLSDFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNI 764
LQ F +ISNIPTIKKFL+PGS++KPPPD YV+ V N+
Sbjct: 181 LQAFKTRISNIPTIKKFLQPGSQRKPPPDSHYVKVVRNV 219
>ref|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 264 bits (675), Expect = 8e-71
Identities = 130/219 (59%), Positives = 168/219 (76%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKL+Y GRGRMES+RW+LAAAGVEF+EEF ET+EQ +KL+ LLF QVP+VEI
Sbjct: 1 MAAKPKLYYFRGRGRMESIRWLLAAAGVEFEEEFFETREQYEKLKKDGLLLFGQVPLVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGM L QTR+IL Y+A K++L GKDLKER IDMY +GTLDL+ ++ + F P ++++
Sbjct: 61 DGMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEEN 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + +KA RYFPVFEK+L+ G+ FLVGN+ S ADI LL+ IL +EE ++LS FP
Sbjct: 121 LALVVEKAKTRYFPVFEKILKDQGEDFLVGNKFSWADIQLLEAILMMEELDASVLSDFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNI 764
LQ F +ISNIPTIKKFL+PGS++KPPPD YV+ V N+
Sbjct: 181 LQAFKTRISNIPTIKKFLQPGSQRKPPPDSHYVKVVRNV 219
>ref|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa].
Length = 222
Score = 254 bits (648), Expect = 1e-67
Identities = 124/220 (56%), Positives = 166/220 (75%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LHY NGRGRME +RW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVEI
Sbjct: 1 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K++L+GKD KER LIDMY EG DL E+I++ P P+++ +
Sbjct: 61 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
V ++ +K+ RY P FEKVL+ HGQ +LVGN+LS ADI L++ + +EE P++L+ FP
Sbjct: 121 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ ++SN+PT+KKFL+PGS++KPP D +R F
Sbjct: 181 LKALKTRVSNLPTVKKFLQPGSQRKPPMDAKKIRRSQEYF 220
>ref|NP_999015.1| glutathione S-transferase A2 [Sus scrofa].
Length = 223
Score = 253 bits (646), Expect = 2e-67
Identities = 123/220 (55%), Positives = 165/220 (75%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LHY NGRGRME +RW+LAAAGVEF+E+F+E L KL + LLFQQVPMVEI
Sbjct: 1 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIENPNDLNKLTNDGSLLFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K++L+GKD KER LIDMY EG DL E+I++ P P+++ +
Sbjct: 61 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
V ++ +K+ RY P FEKVL+ HGQ +LVGN+LS ADI L++ + +EE P++L+ FP
Sbjct: 121 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ ++SN+PT+KKFL+PGS++KPP D+ + IF
Sbjct: 181 LKALKTRVSNLPTVKKFLQPGSQRKPPTDEESLEKARRIF 220
>ref|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like [Sus scrofa].
Length = 223
Score = 243 bits (619), Expect = 2e-64
Identities = 115/220 (52%), Positives = 164/220 (74%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY +GRGR E +RW+LA+AGVEF+E+F++T E L+KL++ L+FQQVPM+EI
Sbjct: 1 MAGKPKLHYFDGRGRAEVIRWLLASAGVEFEEKFVDTLEDLEKLRNDGSLMFQQVPMIEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K+ L GKD+KER +DMY EG D+ E+I++ P PD++ +
Sbjct: 61 DGMKLVQTRAILNYIATKYDLCGKDIKERAAVDMYTEGIADIGEMIMLLPICPPDEKDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + ++ Y P FEKVL+ HGQ +LVGN+LS ADI L++ + +EE P++L+ FP
Sbjct: 121 MALIKERVSNHYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ ++SN+PT+KKFL+PGS++KPP D+ + IF
Sbjct: 181 LKALKTRVSNLPTVKKFLQPGSQRKPPTDEESLEKARRIF 220
>ref|XP_003128842.2| PREDICTED: glutathione S-transferase alpha M14-like [Sus scrofa].
Length = 225
Score = 154 bits (390), Expect = 8e-38
Identities = 81/143 (56%), Positives = 106/143 (74%), Gaps = 3/143 (2%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKL---QDGNHLLFQQVPM 278
MA++P+L+Y NGRGRME+ W LAAAGVEF++ F + L QDG+ LLFQQVPM
Sbjct: 1 MASQPRLYYFNGRGRMEAFPWRLAAAGVEFNKHFDASSISLHFFLLSQDGS-LLFQQVPM 59
Query: 279 VEIDGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQ 458
VEIDGMKLVQTR+IL+YIA K++L+GKD KER LIDMY EG DL E+I++ P P+++
Sbjct: 60 VEIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEK 119
Query: 459 QKEVVNMAQKAIIRYFPVFEKVL 527
+V ++ +K+ RY P FEK L
Sbjct: 120 DAKVASIKEKSTNRYLPAFEKAL 142
>ref|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-like [Sus scrofa].
Length = 239
Score = 87.4 bits (215), Expect = 2e-17
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Frame = +3
Query: 132 YPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQT 311
Y RGR E++R +LA G + EE + + LQ L+ Q+P + + L Q+
Sbjct: 37 YFPARGRCEAMRMLLADQGQSWKEEVVTKETWLQGPLKAT-CLYGQLPKFQDGDLTLYQS 95
Query: 312 RSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLEL---IIMHPFLKPDDQQKEVVNMA 482
+IL ++ L+GKDL+E L+DM +G DL L +I H + +D+ + V +
Sbjct: 96 NAILRHLGRSLGLYGKDLREAALLDMVNDGVEDLRRLCSHLIRHNY--EEDKARYVEELP 153
Query: 483 QKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHLQEFT 662
+R F +G GQ F+VG+Q+S AD LL +L+ + +P+ L AFP L +
Sbjct: 154 GH--LRPFETLLSQNQG-GQAFIVGSQISFADYNLLDLLLSHQVLVPSCLDAFPLLSAYV 210
Query: 663 VKISNIPTIKKFL 701
++S P +K FL
Sbjct: 211 ARLSARPKLKAFL 223
>ref|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D synthase-like [Sus
scrofa].
Length = 199
Score = 61.6 bits (148), Expect = 1e-09
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 4/204 (1%)
Frame = +3
Query: 123 KLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKL 302
KL Y N RGR E +R++ A +++++ +E Q Q L F ++P++E+DG+ L
Sbjct: 5 KLTYFNMRGRAEIIRYIFAYLDIKYEDHRIE---QADWPQIKPTLPFGKIPILEVDGLNL 61
Query: 303 VQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFL-KPDDQQKEVVNM 479
Q+ +I Y+A L GK E+ +D V+ TLD + + P+ K D + ++ N
Sbjct: 62 HQSLAIARYLAKNTDLAGKTDLEQCQVDAIVD-TLD--DFMSCFPWAEKKQDVKDQIFNE 118
Query: 480 AQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADI---ILLQTILALEEKIPNILSAFPHL 650
+ G + F +GN ++ AD I T+L + P++L P L
Sbjct: 119 LLTCEAPHLLQDLDTYLGEKEWF-IGNSVTWADFYWEICSTTLLVFK---PDLLDIHPRL 174
Query: 651 QEFTVKISNIPTIKKFLEPGSKKK 722
K+ +IP I +++ + K
Sbjct: 175 VTLRKKVQSIPAIANWIQQRPQTK 198
>ref|XP_001926158.3| PREDICTED: maleylacetoacetate isomerase-like [Sus scrofa].
Length = 218
Score = 48.9 bits (115), Expect = 7e-06
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = +3
Query: 264 QQVPMVEIDGMKLVQTRSILHYIADKH---HLFGKDLKERTLI----DMYVEGTLDLLEL 422
+QVP ++IDG+ L Q+ +I+ Y+ + L +D K+R + D+ G L L
Sbjct: 59 KQVPALKIDGITLSQSLAIIEYLEETRPTPRLLPQDPKKRAQVRMISDLLASGIQPLQNL 118
Query: 423 IIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTIL 602
+++ K + + AQ+ I F E++L+ ++ +G+++S+AD+ L
Sbjct: 119 SVLNQVGKENQ-----LTWAQRVIAPGFNALEQILQSTAGKYCMGDEVSMADLCL----- 168
Query: 603 ALEEKIPNILSAFPHLQEFTVKISNIPTIKK 695
+P + +A + + V +S PTI +
Sbjct: 169 -----VPQVANA----ERYKVDLSPYPTISR 190
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,587,897
Number of extensions: 904378
Number of successful extensions: 2672
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 2670
Number of HSP's successfully gapped: 11
Length of query: 455
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 353
Effective length of database: 8,804,438
Effective search space: 3107966614
Effective search space used: 3107966614
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008615
(1366 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_034487.2| glutathione S-transferase A4 [Mus musculus]. 273 2e-73
Alignment gi|NP_001070821.1| glutathione S-transferase A3 [Mus musculus]. 244 9e-65
Alignment gi|NP_034486.2| glutathione S-transferase A3 [Mus musculus]. 244 9e-65
Alignment gi|NP_032208.2| glutathione S-transferase A2 [Mus musculus]. 236 4e-62
Alignment gi|NP_001116132.1| hypothetical protein LOC100042314 [Mus muscu... 235 7e-62
Alignment gi|NP_032207.3| glutathione S-transferase A1 [Mus musculus]. 234 2e-61
Alignment gi|NP_001230021.1| predicted gene 3776 [Mus musculus]. 232 6e-61
Alignment gi|NP_659118.1| hypothetical protein LOC225884 [Mus musculus]. 85 1e-16
Alignment gi|NP_038569.1| glutathione S-transferase P 1 [Mus musculus]. 78 1e-14
Alignment gi|XP_001478705.1| PREDICTED: glutathione S-transferase P 2-lik... 75 9e-14
>ref|NP_034487.2| glutathione S-transferase A4 [Mus musculus].
Length = 222
Score = 273 bits (698), Expect = 2e-73
Identities = 135/219 (61%), Positives = 169/219 (77%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKL+Y NGRGRMES+RW+LAAAGVEF+EEFLET+EQ +K+Q HLLF QVP+VEI
Sbjct: 1 MAAKPKLYYFNGRGRMESIRWLLAAAGVEFEEEFLETREQYEKMQKDGHLLFGQVPLVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGM L QTR+IL Y+A K++L+GKDLKER IDMY +GT DL+ +I + PF P ++++
Sbjct: 61 DGMMLTQTRAILSYLAAKYNLYGKDLKERVRIDMYADGTQDLMMMIAVAPFKTPKEKEES 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ +A RYFPVFEK+L+ HG+ FLVGNQLS ADI LL+ IL +EE +LS FP
Sbjct: 121 YDLILSRAKTRYFPVFEKILKDHGEAFLVGNQLSWADIQLLEAILMVEELSAPVLSDFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNI 764
LQ F +ISNIPTIKKFL+PGS++KPPPD YV V +
Sbjct: 181 LQAFKTRISNIPTIKKFLQPGSQRKPPPDGPYVEVVRTV 219
>ref|NP_001070821.1| glutathione S-transferase A3 [Mus musculus].
Length = 221
Score = 244 bits (624), Expect = 9e-65
Identities = 116/220 (52%), Positives = 165/220 (75%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LHY +GRGRME +RW+LAAAGVEF+E+FL+T++ L +L+ L+FQQVPMVEI
Sbjct: 1 MAGKPVLHYFDGRGRMEPIRWLLAAAGVEFEEKFLKTRDDLARLRSDGSLMFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQT++IL+YIA K++L+GKD+KER +IDMY EG DL +I+ +P + P++++
Sbjct: 61 DGMKLVQTKAILNYIASKYNLYGKDMKERAIIDMYTEGVADLEIMILYYPHMPPEEKEAS 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + ++ RYFP FEKVL+ HGQ +LVGN+LS ADI L++ + +EE P ++ FP
Sbjct: 121 LAKIKEQTRNRYFPAFEKVLKSHGQDYLVGNRLSRADIALVELLYHVEELDPGVVDNFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ ++SN+PT+KKFL+PGS++KP D V + IF
Sbjct: 181 LKALRSRVSNLPTVKKFLQPGSQRKPFDDAKCVESAKKIF 220
>ref|NP_034486.2| glutathione S-transferase A3 [Mus musculus].
Length = 221
Score = 244 bits (624), Expect = 9e-65
Identities = 116/220 (52%), Positives = 165/220 (75%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LHY +GRGRME +RW+LAAAGVEF+E+FL+T++ L +L+ L+FQQVPMVEI
Sbjct: 1 MAGKPVLHYFDGRGRMEPIRWLLAAAGVEFEEKFLKTRDDLARLRSDGSLMFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQT++IL+YIA K++L+GKD+KER +IDMY EG DL +I+ +P + P++++
Sbjct: 61 DGMKLVQTKAILNYIASKYNLYGKDMKERAIIDMYTEGVADLEIMILYYPHMPPEEKEAS 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + ++ RYFP FEKVL+ HGQ +LVGN+LS ADI L++ + +EE P ++ FP
Sbjct: 121 LAKIKEQTRNRYFPAFEKVLKSHGQDYLVGNRLSRADIALVELLYHVEELDPGVVDNFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ ++SN+PT+KKFL+PGS++KP D V + IF
Sbjct: 181 LKALRSRVSNLPTVKKFLQPGSQRKPFDDAKCVESAKKIF 220
>ref|NP_032208.2| glutathione S-transferase A2 [Mus musculus].
Length = 222
Score = 236 bits (601), Expect = 4e-62
Identities = 116/220 (52%), Positives = 157/220 (71%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LHY N RGRME +RW+LAAAGVEF+E+F+++ E L+KL+ +L+F QVPMVEI
Sbjct: 1 MAGKPVLHYFNARGRMECIRWLLAAAGVEFEEKFIQSPEDLEKLKKDGNLMFDQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K+ L+GKD+KER LIDMY EG LDL E+I PD ++ +
Sbjct: 61 DGMKLVQTRAILNYIATKYDLYGKDMKERALIDMYTEGILDLTEMIGQLVLCPPDQREAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ RY P FEKVL+ HGQ +LVGN+L+ D+ LL+ +L +EE ++L+ FP
Sbjct: 121 TALAKDRTKNRYLPAFEKVLKSHGQDYLVGNRLTRVDVHLLELLLYVEELDASLLTPFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ F +IS++P +KKFL PGS++KPP D + +F
Sbjct: 181 LKAFKSRISSLPNVKKFLHPGSQRKPPLDAKQIEEARKVF 220
>ref|NP_001116132.1| hypothetical protein LOC100042314 [Mus musculus].
Length = 222
Score = 235 bits (599), Expect = 7e-62
Identities = 117/220 (53%), Positives = 158/220 (71%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LH+ N RGRME +RW+LAAAGVEF+E+F+++ E L+KL+ +L+F QVPMVEI
Sbjct: 1 MAGKPVLHHFNARGRMECIRWLLAAAGVEFEEKFIQSPEDLEKLKKDGNLMFDQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K+ L+GKD+KER LIDMY EG LDL E+I PD ++ +
Sbjct: 61 DGMKLVQTRAILNYIATKYDLYGKDMKERALIDMYSEGILDLTEMIGQLLICPPDQKEAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ RY P FEKVL+GHGQ +LVGN+L+ D+ LL+ +L +EE ++L+ FP
Sbjct: 121 TALAKDRTKNRYLPAFEKVLKGHGQDYLVGNRLTRVDVHLLELLLYVEEFDASLLTPFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ F +IS++P +KKFL PGS++KPP D + IF
Sbjct: 181 LKAFKSRISSLPNVKKFLHPGSQRKPPLDAKQIEEARKIF 220
>ref|NP_032207.3| glutathione S-transferase A1 [Mus musculus].
Length = 223
Score = 234 bits (596), Expect = 2e-61
Identities = 115/209 (55%), Positives = 154/209 (73%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LHY N RGRME +RW+LAAAGVEF+E+F+++ E L+KL+ +L+F QVPMVEI
Sbjct: 1 MAGKPVLHYFNARGRMECIRWLLAAAGVEFEEKFIQSPEDLEKLKKDGNLMFDQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKL QTR+IL+YIA K+ L+GKD+KER LIDMY EG LDL E+I PD ++ +
Sbjct: 61 DGMKLAQTRAILNYIATKYDLYGKDMKERALIDMYSEGILDLTEMIGQLVLCPPDQREAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ RY P FEKVL+ HGQ +LVGN+L+ DI LL+ +L +EE ++L+ FP
Sbjct: 121 TALAKDRTKNRYLPAFEKVLKSHGQDYLVGNRLTRVDIHLLEVLLYVEEFDASLLTPFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPD 734
L+ F +IS++P +KKFL+PGS++KPP D
Sbjct: 181 LKAFKSRISSLPNVKKFLQPGSQRKPPMD 209
>ref|NP_001230021.1| predicted gene 3776 [Mus musculus].
Length = 223
Score = 232 bits (591), Expect = 6e-61
Identities = 114/209 (54%), Positives = 154/209 (73%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KP LH+ N RGRME +RW+LAAAGVEF+E+F+++ E L+KL+ +L+F QVPMVEI
Sbjct: 1 MAGKPVLHHFNARGRMECIRWLLAAAGVEFEEKFIQSPEDLEKLKKDGNLMFDQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKL QTR+IL+YIA K+ L+GKD+KER LIDMY EG LDL E+I PD ++ +
Sbjct: 61 DGMKLAQTRAILNYIATKYDLYGKDMKERALIDMYSEGILDLTEMIGQLVLCPPDQREAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ RY P FEKVL+ HGQ +LVGN+L+ DI LL+ +L +EE ++L+ FP
Sbjct: 121 TALAKDRTKNRYLPAFEKVLKSHGQDYLVGNRLTRVDIHLLEVLLYVEEFDASLLTPFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPD 734
L+ F +IS++P +KKFL+PGS++KPP D
Sbjct: 181 LKAFKSRISSLPNVKKFLQPGSQRKPPMD 209
>ref|NP_659118.1| hypothetical protein LOC225884 [Mus musculus].
Length = 210
Score = 85.1 bits (209), Expect = 1e-16
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 2/195 (1%)
Frame = +3
Query: 126 LHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLV 305
+++P+ RGR E +R +LA G + EE + T + ++ LF Q+P + + L
Sbjct: 7 VYFPS-RGRCEVMRMLLADQGQSWKEEVV-TLDVWEQGTFKASCLFGQIPKFQDGELTLY 64
Query: 306 QTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKEVVNMAQ 485
Q+ +IL ++ L+GKD +E L+DM +G DL I + KE + Q
Sbjct: 65 QSNTILRHLGRSFGLYGKDQQEAALVDMVNDGLEDLFRRIAR----QYRHILKEGKDQYQ 120
Query: 486 KAIIRYFPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHLQEF 659
K + + FE +L + GQ F+VG+Q+S AD LL +L LE P L+ FP +
Sbjct: 121 KELPGHLKPFETLLAQNRGGQSFIVGDQISFADYRLLDVLLNLELLFPGYLNDFPLFSAY 180
Query: 660 TVKISNIPTIKKFLE 704
++ + P +K FLE
Sbjct: 181 VARLKSRPKLKAFLE 195
>ref|NP_038569.1| glutathione S-transferase P 1 [Mus musculus].
Length = 210
Score = 78.2 bits (191), Expect = 1e-14
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Frame = +3
Query: 144 RGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQTRSIL 323
RGR E++R +LA G + EE + +Q L L+ Q+P E + L Q+ +IL
Sbjct: 12 RGRCEAMRMLLADQGQSWKEEVVTIDTWMQGLLKPT-CLYGQLPKFEDGDLTLYQSNAIL 70
Query: 324 HYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKEVVNMAQKAIIRY 503
++ L+GK+ +E +DM +G DL + + ++ + + V KA+ +
Sbjct: 71 RHLGRSLGLYGKNQREAAQMDMVNDGVEDLRGKYVTLIYTNYENGKNDYV----KALPGH 126
Query: 504 FPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHLQEFTVKISN 677
FE +L + G+ F+VG+Q+S AD LL +L + P L FP L + ++S
Sbjct: 127 LKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAYVARLSA 186
Query: 678 IPTIKKFL 701
P IK FL
Sbjct: 187 RPKIKAFL 194
>ref|XP_001478705.1| PREDICTED: glutathione S-transferase P 2-like [Mus musculus].
Length = 210
Score = 75.5 bits (184), Expect = 9e-14
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Frame = +3
Query: 126 LHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLV 305
+++P+ RGR E++R +L G + EE + +Q L L+ Q+P E + L
Sbjct: 7 VYFPS-RGRCEAMRMLLTDQGQSWKEEVVTIDTWMQGLLKPT-CLYGQLPKFEDGDLTLY 64
Query: 306 QTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKEVVNMAQ 485
Q+ +IL ++ L+GK+ +E +DM +G DL + ++ + + V
Sbjct: 65 QSNAILRHLGRSLGLYGKNQREAAQVDMVNDGVEDLRGKYGTMIYRNYENGKNDYV---- 120
Query: 486 KAIIRYFPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHLQEF 659
KA+ + FE +L + G+ F+VG+Q+S AD LL +L + P L FP L +
Sbjct: 121 KALPGHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAY 180
Query: 660 TVKISNIPTIKKFL 701
++S P IK FL
Sbjct: 181 VARLSARPKIKAFL 194
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 45,637,462
Number of extensions: 1218394
Number of successful extensions: 3613
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 3604
Number of HSP's successfully gapped: 16
Length of query: 455
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 350
Effective length of database: 12,463,779
Effective search space: 4362322650
Effective search space used: 4362322650
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008615
(1366 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001503.1| glutathione S-transferase A4 [Homo sapiens]. 421 e-118
Alignment gi|NP_000837.3| glutathione S-transferase A2 [Homo sapiens]. 259 5e-69
Alignment gi|NP_665683.1| glutathione S-transferase A1 [Homo sapiens]. 255 8e-68
Alignment gi|NP_000838.3| glutathione S-transferase A3 [Homo sapiens]. 253 3e-67
Alignment gi|NP_714543.1| glutathione S-transferase A5 [Homo sapiens]. 249 4e-66
Alignment gi|NP_000843.1| glutathione S-transferase P [Homo sapiens]. 77 3e-14
Alignment gi|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo ... 49 8e-06
>ref|NP_001503.1| glutathione S-transferase A4 [Homo sapiens].
Length = 222
Score = 421 bits (1082), Expect = e-118
Identities = 207/222 (93%), Positives = 217/222 (97%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA +PKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQL KLQDGNHLLFQQVPMVEI
Sbjct: 1 MAARPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTRSILHYIADKH+LFGK+LKERTLIDMYVEGTLDLLEL+IMHPFLKPDDQQKE
Sbjct: 61 DGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKE 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
VVNMAQKAIIRYFPVFEK+LRGHGQ FLVGNQLSLAD+ILLQTILALEEKIPNILSAFP
Sbjct: 121 VVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPF 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP 773
LQE+TVK+SNIPTIK+FLEPGSKKKPPPD+IYVRTVYNIF P
Sbjct: 181 LQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP 222
>ref|NP_000837.3| glutathione S-transferase A2 [Homo sapiens].
Length = 222
Score = 259 bits (661), Expect = 5e-69
Identities = 124/220 (56%), Positives = 172/220 (78%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY N RGRMES+RW+LAAAGVEF+E+F+++ E L KL++ +L+FQQVPMVEI
Sbjct: 1 MAEKPKLHYSNIRGRMESIRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K++L+GKD+KE+ LIDMY+EG DL E+I++ PF +P++Q +
Sbjct: 61 DGMKLVQTRAILNYIASKYNLYGKDIKEKALIDMYIEGIADLGEMILLLPFSQPEEQDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + +K RYFP FEKVL+ HGQ +LVGN+LS ADI L++ + +EE +++S+FP
Sbjct: 121 LALIQEKTKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ +ISN+PT+KKFL+PGS +KPP D+ + IF
Sbjct: 181 LKALKTRISNLPTVKKFLQPGSPRKPPMDEKSLEESRKIF 220
>ref|NP_665683.1| glutathione S-transferase A1 [Homo sapiens].
Length = 222
Score = 255 bits (651), Expect = 8e-68
Identities = 123/220 (55%), Positives = 169/220 (76%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY N RGRMES RW+LAAAGVEF+E+F+++ E L KL++ +L+FQQVPMVEI
Sbjct: 1 MAEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K++L+GKD+KER LIDMY+EG DL E+I++ P P+++ +
Sbjct: 61 DGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + +K RYFP FEKVL+ HGQ +LVGN+LS ADI L++ + +EE +++S+FP
Sbjct: 121 LALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ +ISN+PT+KKFL+PGS +KPP D+ + IF
Sbjct: 181 LKALKTRISNLPTVKKFLQPGSPRKPPMDEKSLEEARKIF 220
>ref|NP_000838.3| glutathione S-transferase A3 [Homo sapiens].
Length = 222
Score = 253 bits (646), Expect = 3e-67
Identities = 123/220 (55%), Positives = 166/220 (75%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY NGRGRME +RW+LAAAGVEF+E+F+ + E L KL++ L+FQQVPMVEI
Sbjct: 1 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K++L+GKD+KER LIDMY EG DL E+I++ P +P+++ +
Sbjct: 61 DGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ + +K RYFP FEKVL+ HGQ +LVGN+LS ADI L++ + +EE +++S FP
Sbjct: 121 IALIKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ +ISN+PT+KKFL+PGS +KPP D + IF
Sbjct: 181 LKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIF 220
>ref|NP_714543.1| glutathione S-transferase A5 [Homo sapiens].
Length = 222
Score = 249 bits (636), Expect = 4e-66
Identities = 122/220 (55%), Positives = 165/220 (75%)
Frame = +3
Query: 108 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 287
MA KPKLHY N RG MES+RW+LAAAGVE +E+FLE+ E L KL++ LLFQQVPMVEI
Sbjct: 1 MAEKPKLHYSNARGSMESIRWLLAAAGVELEEKFLESAEDLDKLRNDGSLLFQQVPMVEI 60
Query: 288 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 467
DGMKLVQTR+IL+YIA K++L+GKD+KER LIDMY EG +DL E+I++ +P+++ +
Sbjct: 61 DGMKLVQTRAILNYIASKYNLYGKDMKERALIDMYTEGIVDLTEMILLLLICQPEERDAK 120
Query: 468 VVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 647
+ +K RYFP FEKVL+ H Q +LVGN+LS ADI L++ +EE +++S+FP
Sbjct: 121 TALVKEKIKNRYFPAFEKVLKSHRQDYLVGNKLSWADIHLVELFYYVEELDSSLISSFPL 180
Query: 648 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 767
L+ +ISN+PT+KKFL+PGS++KPP D+ + IF
Sbjct: 181 LKALKTRISNLPTVKKFLQPGSQRKPPMDEKSLEEARKIF 220
>ref|NP_000843.1| glutathione S-transferase P [Homo sapiens].
Length = 210
Score = 77.4 bits (189), Expect = 3e-14
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Frame = +3
Query: 144 RGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQTRSIL 323
RGR ++R +LA G + EE + T E Q+ L+ Q+P + + L Q+ +IL
Sbjct: 12 RGRCAALRMLLADQGQSWKEEVV-TVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTIL 70
Query: 324 HYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKEVVNMAQKAIIRY 503
++ L+GKD +E L+DM +G DL I + + + + V KA+
Sbjct: 71 RHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYV----KALPGQ 126
Query: 504 FPVFEKVLRGH--GQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPHLQEFTVKISN 677
FE +L + G+ F+VG+Q+S AD LL +L E P L AFP L + ++S
Sbjct: 127 LKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSA 186
Query: 678 IPTIKKFL 701
P +K FL
Sbjct: 187 RPKLKAFL 194
>ref|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo sapiens].
Length = 218
Score = 49.3 bits (116), Expect = 8e-06
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 16/218 (7%)
Frame = +3
Query: 126 LHYPNGRGRMESVRWVLAAAGVEFDE---------EFLETKEQLQKLQDGNHLLFQQVPM 278
L Y N RG S+R +L ++E ++ ++ +K + G L F +P
Sbjct: 5 LGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLG--LDFPNLPY 62
Query: 279 VEIDGM-KLVQTRSILHYIADKHHLFGKDLKER----TLIDMYVEGTLDLLELIIMHPF- 440
+ IDG K+ Q+ +IL YIA KH+L G+ KE+ L + +++ + L +L F
Sbjct: 63 L-IDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFE 121
Query: 441 -LKPDDQQKEVVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEK 617
LKP+ Q A+ ++ + L Q + +G++++ D I + +
Sbjct: 122 KLKPEYLQ---------ALPEMLKLYSQFL--GKQPWFLGDKITFVDFIAYDVLERNQVF 170
Query: 618 IPNILSAFPHLQEFTVKISNIPTIKKFLEPGSKKKPPP 731
P+ L AFP+L++F + + I +++ S+ P P
Sbjct: 171 EPSCLDAFPNLKDFISRFEGLEKISAYMK-SSRFLPRP 207
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 53,559,445
Number of extensions: 1437054
Number of successful extensions: 4119
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 4114
Number of HSP's successfully gapped: 7
Length of query: 455
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 349
Effective length of database: 14,802,980
Effective search space: 5166240020
Effective search space used: 5166240020
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008615
(1366 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 1340 0.0
>Sscrofa_Chr07
|| Length = 134764511
Score = 1340 bits (676), Expect = 0.0
Identities = 707/716 (98%), Gaps = 1/716 (0%)
Strand = Plus / Minus
Query: 651 caggagttcacagtgaaaataagtaatatccctacaattaagaaattccttgaacctggc 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380594 caggagttcacagtgaaaataagtaatatccctacaattaagaaattccttgaacctggc 134380535
Query: 711 agcaagaagaagcctcccccggatgacatctacgtgaggaccgtgtataacatctttatg 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380534 agcaagaagaagcctcccccggatgacatctacgtgaggaccgtgtataacatctttatg 134380475
Query: 771 ccgtagacctgcctgcggccgtgagtgaacgccgtgcacagagatcgctgtgtccacagt 830
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380474 ccgtagacctgcctgcggtcgtgagtgaacgccgtgcacagagatcgctgtgtccacagt 134380415
Query: 831 agtgtcttaactgaagccaggctgccgtgatccagctctgtcgtggtactgtgtatcttg 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380414 agtgtcttaactgaagccaggctgccgtgatccagctctgtcgtggtactgtgtatcttg 134380355
Query: 891 ttcctcagttggtctttcatgtcaaggagatagatctcttctagaaacactgactctctt 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380354 ttcctcagttggtctttcatgtcaaggagatagatctcttctagaaacactgactctctt 134380295
Query: 951 ttctgtcccgtgagtgttacaggacctcttctgaaaacccttttggagaggctggtgttt 1010
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 134380294 ttctgtcccatgagtgttacaggacttcttctgaaaacccttttggagaggctggtgttt 134380235
Query: 1011 aaaagttagatctactctgtcaattcatttcctggtagcaaggatgggcaggacctcgag 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380234 aaaagttagatctactctgtcaattcatttcctggtagcaaggatgggcaggacctcgag 134380175
Query: 1071 ctgtcccctgagcctcttttctcctctccttatcctgttctcaaccccttccagtctctt 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380174 ctgtcccctgagcctcttttctcctctccttatcctgttctcaaccccttccagtctctt 134380115
Query: 1131 cctgtttttagcgtctaataacaacagaatccactacatgtgagtaactctctcctctga 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380114 cctgtttttagcgtctaataacaacagaatccactacatgtgagtaactctctcctctga 134380055
Query: 1191 gctgtaatggacccatggttgtgatgaacgcagttgatgtttgccaaaataaaggattta 1250
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134380054 gctgtaatagacccatggttgtgatgaacgcagttgatgtttgccaaaataaaggattta 134379995
Query: 1251 caaatcactgccttgctgctagagtgtttaagttaaattgccttggaatatttaatacat 1310
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 134379994 caaatcactgccttgctgctagagtgtttaagttaaattg-cttggaatatttaatacat 134379936
Query: 1311 tcacatggttcaaaaattgcaaaagtagacaatgctgtctggttggaagtattctt 1366
||||||||||||||||||| ||||||| | || |||||||||||||||||||||||
Sbjct: 134379935 tcacatggttcaaaaattggaaaagtataaaaggctgtctggttggaagtattctt 134379880
Score = 285 bits (144), Expect = 3e-74
Identities = 144/144 (100%)
Strand = Plus / Minus
Query: 380 gattgacatgtatgtggaggggacactggaccttctggaactgattatcatgcatccttt 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134386254 gattgacatgtatgtggaggggacactggaccttctggaactgattatcatgcatccttt 134386195
Query: 440 cctcaaaccagacgatcagcaaaaggaagtggttaacatggcccagaaggctatcattag 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134386194 cctcaaaccagacgatcagcaaaaggaagtggttaacatggcccagaaggctatcattag 134386135
Query: 500 atactttcctgtgttcgaaaaggt 523
||||||||||||||||||||||||
Sbjct: 134386134 atactttcctgtgttcgaaaaggt 134386111
Score = 268 bits (135), Expect = 7e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 520 aggttttacggggtcatggacaaagatttcttgtcggtaatcagctgagccttgcagaca 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134384495 aggttttacggggtcatggacaaagatttcttgtcggtaatcagctgagccttgcagaca 134384436
Query: 580 taattctgctccagaccattttggctcttgaagagaaaattcctaatatcctgtctgcct 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134384435 taattctgctccagaccattttggctcttgaagagaaaattcctaatatcctgtctgcct 134384376
Query: 640 ttcctcacctccagg 654
|||||||||||||||
Sbjct: 134384375 ttcctcacctccagg 134384361
Score = 268 bits (135), Expect = 7e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 246 gggaaccacctgctgttccagcaagtgcccatggttgagattgacgggatgaagttggtg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134388069 gggaaccacctgctgttccagcaagtgcccatggttgagattgacgggatgaagttggtg 134388010
Query: 306 cagacccgaagcatcctccactatatagcagacaagcaccatctcttcggcaaagacctc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134388009 cagacccgaagcatcctccactatatagcagacaagcaccatctcttcggcaaagacctc 134387950
Query: 366 aaggagagaaccctg 380
|||||||||||||||
Sbjct: 134387949 aaggagagaaccctg 134387935
Score = 214 bits (108), Expect = 1e-52
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 87 cagaaaagctgaaaagccatgatggctacgaagcccaagctccactatcccaatggacga 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134399416 cagaaaagctgaaaagccatgatggctacgaagcccaagctccactatcccaatggacga 134399357
Query: 147 ggccggatggaatccgtgagatgggttttagctgccgcaggagtcgag 194
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134399356 ggccggatggaatccgtgagatgggttttagctgccgcaggagtcgag 134399309
Score = 174 bits (88), Expect = 8e-41
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 2 gagcatctccggcagcccgcgggttccccagctgcagacagctagcgggggcgttttgtt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134400469 gagcatctccggcagcccgcgggttccccagctgcagacagctagcgggggcgttttgtt 134400410
Query: 62 cggttccgggcgctcggagtggacccag 89
||||||||||||||||||||||||||||
Sbjct: 134400409 cggttccgggcgctcggagtggacccag 134400382
Score = 109 bits (55), Expect = 4e-21
Identities = 55/55 (100%)
Strand = Plus / Minus
Query: 193 agtttgatgaagaatttttagaaacaaaagaacagttgcagaagttgcaggatgg 247
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134389589 agtttgatgaagaatttttagaaacaaaagaacagttgcagaagttgcaggatgg 134389535
Score = 103 bits (52), Expect = 2e-19
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 256 tgctgttccagcaagtgcccatggttgagattgacgggatgaagttggtgcagacc 311
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 134267474 tgctgttccagcaagtgcccatggttgagattgacgggatgaagctggtgcagacc 134267419
Score = 103 bits (52), Expect = 2e-19
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 256 tgctgttccagcaagtgcccatggttgagattgacgggatgaagttggtgcagacc 311
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 134297033 tgctgttccagcaagtgcccatggttgagattgacgggatgaagctggtgcagacc 134296978
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,955,646
Number of extensions: 330
Number of successful extensions: 330
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 329
Number of HSP's successfully gapped: 9
Length of query: 1366
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1345
Effective length of database: 2,808,413,156
Effective search space: 3777315694820
Effective search space used: 3777315694820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)