Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008625
(1054 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002690923.1| PREDICTED: carbonic anhydrase XII-like [Bos ... 393 e-109
Alignment gi|XP_870878.3| PREDICTED: carbonic anhydrase XII-like [Bos tau... 393 e-109
Alignment gi|NP_001179134.1| carbonic anhydrase 14 [Bos taurus]. 218 5e-57
Alignment gi|XP_002686096.1| PREDICTED: carbonic anhydrase XIV [Bos tauru... 218 5e-57
Alignment gi|NP_776323.1| carbonic anhydrase 6 precursor [Bos taurus]. 147 2e-35
Alignment gi|XP_002689744.1| PREDICTED: carbonic anhydrase IX-like [Bos t... 146 3e-35
Alignment gi|XP_871549.3| PREDICTED: carbonic anhydrase IX-like isoform 3... 146 3e-35
Alignment gi|XP_002692875.1| PREDICTED: carbonic anhydrase XIII [Bos taur... 130 1e-30
Alignment gi|XP_002692874.1| PREDICTED: carbonic anhydrase 1-like [Bos ta... 129 6e-30
Alignment gi|XP_001250684.1| PREDICTED: carbonic anhydrase 1-like [Bos ta... 129 6e-30
>ref|XP_002690923.1| PREDICTED: carbonic anhydrase XII-like [Bos taurus].
Length = 344
Score = 393 bits (1009), Expect = e-109
Identities = 196/291 (67%), Positives = 220/291 (75%), Gaps = 2/291 (0%)
Frame = +3
Query: 141 MPHRNXXXXXXXXXXXXKEQPSSPAPLNGSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDL 320
MP R+ KEQPSSPAPLNGSKWTY+GP+GEKSWSK+YPSCGGLLQSPIDL
Sbjct: 1 MPLRSLHAAAVLLLVVLKEQPSSPAPLNGSKWTYIGPDGEKSWSKTYPSCGGLLQSPIDL 60
Query: 321 HGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSVKLKLFEDMHIQGLGHRYNASQLHL 500
H DIL+YNASL PLAFQGYN++A+ QFVLTNNGHSVK+KL +DM ++GLG RYNASQLHL
Sbjct: 61 HDDILRYNASLRPLAFQGYNQSASPQFVLTNNGHSVKVKLPKDMQVRGLGARYNASQLHL 120
Query: 501 HWGDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFN 680
HWGD+N+PHGSEHT+GG+HFAAELHIVY+NSD YPN S A DKPEGLAV+AVLIE+GS N
Sbjct: 121 HWGDKNDPHGSEHTVGGEHFAAELHIVYYNSDRYPNDSFAKDKPEGLAVVAVLIEVGSSN 180
Query: 681 PSYDKIFSHLPDVKYKDQKVHIPGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFR 860
P+YDKIF HL DVKYK Q+V IPGFSI GSLTTPPC+PTVLWTVFR
Sbjct: 181 PAYDKIFDHLKDVKYKGQEVFIPGFSIEELLPERPEEYYRYRGSLTTPPCYPTVLWTVFR 240
Query: 861 NPVQFHRSSCWLWRQS--CTAHTWMTRPQRDGPQLPGKQKFDERLVYVSFQ 1007
NPVQ + CT H P+ QKFDERLVYVSFQ
Sbjct: 241 NPVQISQEQLMKLETDLYCT-HMDDPSPREMVNNFRRVQKFDERLVYVSFQ 290
>ref|XP_870878.3| PREDICTED: carbonic anhydrase XII-like [Bos taurus].
Length = 344
Score = 393 bits (1009), Expect = e-109
Identities = 196/291 (67%), Positives = 220/291 (75%), Gaps = 2/291 (0%)
Frame = +3
Query: 141 MPHRNXXXXXXXXXXXXKEQPSSPAPLNGSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDL 320
MP R+ KEQPSSPAPLNGSKWTY+GP+GEKSWSK+YPSCGGLLQSPIDL
Sbjct: 1 MPLRSLHAAAVLLLVVLKEQPSSPAPLNGSKWTYIGPDGEKSWSKTYPSCGGLLQSPIDL 60
Query: 321 HGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSVKLKLFEDMHIQGLGHRYNASQLHL 500
H DIL+YNASL PLAFQGYN++A+ QFVLTNNGHSVK+KL +DM ++GLG RYNASQLHL
Sbjct: 61 HDDILRYNASLRPLAFQGYNQSASPQFVLTNNGHSVKVKLPKDMQVRGLGARYNASQLHL 120
Query: 501 HWGDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFN 680
HWGD+N+PHGSEHT+GG+HFAAELHIVY+NSD YPN S A DKPEGLAV+AVLIE+GS N
Sbjct: 121 HWGDKNDPHGSEHTVGGEHFAAELHIVYYNSDRYPNDSFAKDKPEGLAVVAVLIEVGSSN 180
Query: 681 PSYDKIFSHLPDVKYKDQKVHIPGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFR 860
P+YDKIF HL DVKYK Q+V IPGFSI GSLTTPPC+PTVLWTVFR
Sbjct: 181 PAYDKIFDHLKDVKYKGQEVFIPGFSIEELLPERPEEYYRYRGSLTTPPCYPTVLWTVFR 240
Query: 861 NPVQFHRSSCWLWRQS--CTAHTWMTRPQRDGPQLPGKQKFDERLVYVSFQ 1007
NPVQ + CT H P+ QKFDERLVYVSFQ
Sbjct: 241 NPVQISQEQLMKLETDLYCT-HMDDPSPREMVNNFRRVQKFDERLVYVSFQ 290
>ref|NP_001179134.1| carbonic anhydrase 14 [Bos taurus].
Length = 336
Score = 218 bits (556), Expect = 5e-57
Identities = 115/281 (40%), Positives = 165/281 (58%), Gaps = 6/281 (2%)
Frame = +3
Query: 225 GSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFV 404
G WTY GP+G+ W SYP CG QSPI++ D + ++ L+PL GY + +
Sbjct: 19 GQHWTYEGPHGQDHWPASYPECGSNAQSPINIQTDSVTFDPDLLPLQPHGYEQPGTEPLN 78
Query: 405 LTNNGHSVKLKLFEDMHIQGLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
L NNGH+V+L L ++++GL +Y A+QLHLHWG + P GSEH I GK AAELHIV+
Sbjct: 79 LHNNGHTVQLSLPSTLYLEGLPRKYVAAQLHLHWGQKGTPWGSEHLINGKATAAELHIVH 138
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
++S+ Y + S A+ +P+GLAVL +LIE+G + NP+Y+ I SHL ++KYKDQK +P F++
Sbjct: 139 YDSESYESLSEAAQRPQGLAVLGILIEVGETKNPAYEHILSHLHEIKYKDQKTSMPPFNV 198
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAHTWMTRPQ 941
GSLTTPPC+ +VLWTVF Q R++ + T +
Sbjct: 199 RGLLPLLLAQYFRYNGSLTTPPCYQSVLWTVFHRRAQISTEQLEKLRET----LFSTEEE 254
Query: 942 RDGPQLP---GKQKFDERLVYVSFQTVPDSTYAG--LNLGI 1049
P + Q ++R+V+ SF V S G L+LG+
Sbjct: 255 PSEPLVQNYRAPQPLNQRMVFASFIQVGPSYTTGEMLSLGV 295
>ref|XP_002686096.1| PREDICTED: carbonic anhydrase XIV [Bos taurus].
Length = 336
Score = 218 bits (556), Expect = 5e-57
Identities = 115/281 (40%), Positives = 165/281 (58%), Gaps = 6/281 (2%)
Frame = +3
Query: 225 GSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFV 404
G WTY GP+G+ W SYP CG QSPI++ D + ++ L+PL GY + +
Sbjct: 19 GQHWTYEGPHGQDHWPASYPECGSNAQSPINIQTDSVTFDPDLLPLQPHGYEQPGTEPLN 78
Query: 405 LTNNGHSVKLKLFEDMHIQGLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
L NNGH+V+L L ++++GL +Y A+QLHLHWG + P GSEH I GK AAELHIV+
Sbjct: 79 LHNNGHTVQLSLPSTLYLEGLPRKYVAAQLHLHWGQKGTPWGSEHLINGKATAAELHIVH 138
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
++S+ Y + S A+ +P+GLAVL +LIE+G + NP+Y+ I SHL ++KYKDQK +P F++
Sbjct: 139 YDSESYESLSEAAQRPQGLAVLGILIEVGETKNPAYEHILSHLHEIKYKDQKTSMPPFNV 198
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAHTWMTRPQ 941
GSLTTPPC+ +VLWTVF Q R++ + T +
Sbjct: 199 RGLLPLLLAQYFRYNGSLTTPPCYQSVLWTVFHRRAQISTEQLEKLRET----LFSTEEE 254
Query: 942 RDGPQLP---GKQKFDERLVYVSFQTVPDSTYAG--LNLGI 1049
P + Q ++R+V+ SF V S G L+LG+
Sbjct: 255 PSEPLVQNYRAPQPLNQRMVFASFIQVGPSYTTGEMLSLGV 295
>ref|NP_776323.1| carbonic anhydrase 6 precursor [Bos taurus].
Length = 319
Score = 147 bits (370), Expect = 2e-35
Identities = 94/271 (34%), Positives = 131/271 (48%), Gaps = 5/271 (1%)
Frame = +3
Query: 231 KWTYL-GPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVL 407
+WTY G EK W YP CGG QSPIDL ++YN SL L GY +F +
Sbjct: 17 EWTYSEGVLDEKHWRLQYPDCGGTRQSPIDLKMKKVRYNPSLRALNLTGYG-LRQGEFPM 75
Query: 408 TNNGHSVKLKLFEDMHI-QGLGHRYNASQLHLHW-GDQNEPHGSEHTIGGKHFAAELHIV 581
TNNGH+V++ L M + G +Y A Q+H HW GD +E GSEHT+ G + E+H+V
Sbjct: 76 TNNGHTVQISLPSSMRMTTSDGSQYLAKQMHFHWGGDSSEISGSEHTVDGMRYIIEIHVV 135
Query: 582 YFNSDLYPNASIASDKPEGLAVLAVLIEMGSF--NPSYDKIFSHLPDVKYKDQKVHIPGF 755
+++S Y + A ++P+GLAVLA L+E+ + N Y SHL D++Y Q +
Sbjct: 136 HYHSK-YGSYEEAQNEPDGLAVLAALVEVKDYAENTYYSNFISHLEDIRYAGQSTVLRDL 194
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAHTWMTR 935
I GSLTTP C V W V + V+ ++ S H T
Sbjct: 195 DIQDMLPGDLRYYYSYLGSLTTPSCTENVHWFVVADTVKLSKTQIEKLENSLLNHQNETI 254
Query: 936 PQRDGPQLPGKQKFDERLVYVSFQTVPDSTY 1028
Q + R+V +F + P Y
Sbjct: 255 QN----NYRSTQPLNHRVVEANFVSHPHQEY 281
>ref|XP_002689744.1| PREDICTED: carbonic anhydrase IX-like [Bos taurus].
Length = 449
Score = 146 bits (369), Expect = 3e-35
Identities = 85/231 (36%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Frame = +3
Query: 228 SKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVL 407
S W Y G W + P+C G QSP+D+ ++ + +L PL F G+ + L
Sbjct: 127 SHWRY---GGAPPWPQVSPACAGRFQSPVDIRPELTAFCPALRPLEFLGFELPPQPKLRL 183
Query: 408 TNNGHSVKLKLFEDMHIQ-GLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
NNGH+V+L L + + G G Y A QLHLHWG P GSEHT+ G F AE+H+V+
Sbjct: 184 CNNGHTVQLSLPSGLKMALGPGQEYRALQLHLHWGAAGRP-GSEHTVDGHRFPAEIHVVH 242
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
S + A +P GLAVLA ++ G N +Y+++ S L ++ KD + +PG +
Sbjct: 243 L-STAFEEFDEALGRPGGLAVLAAFLQEGPEENSAYEQLLSRLGEITEKDSETWVPGLDV 301
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV-----QFHRSSCWLW 899
GSLTTPPC V+WTVF V Q H S LW
Sbjct: 302 SALLPSDLSRYFRYEGSLTTPPCAQGVIWTVFNQTVKLSAKQLHTLSDSLW 352
>ref|XP_871549.3| PREDICTED: carbonic anhydrase IX-like isoform 3 [Bos taurus].
Length = 440
Score = 146 bits (369), Expect = 3e-35
Identities = 85/231 (36%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Frame = +3
Query: 228 SKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVL 407
S W Y G W + P+C G QSP+D+ ++ + +L PL F G+ + L
Sbjct: 127 SHWRY---GGAPPWPQVSPACAGRFQSPVDIRPELTAFCPALRPLEFLGFELPPQPKLRL 183
Query: 408 TNNGHSVKLKLFEDMHIQ-GLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
NNGH+V+L L + + G G Y A QLHLHWG P GSEHT+ G F AE+H+V+
Sbjct: 184 CNNGHTVQLSLPSGLKMALGPGQEYRALQLHLHWGAAGRP-GSEHTVDGHRFPAEIHVVH 242
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
S + A +P GLAVLA ++ G N +Y+++ S L ++ KD + +PG +
Sbjct: 243 L-STAFEEFDEALGRPGGLAVLAAFLQEGPEENSAYEQLLSRLGEITEKDSETWVPGLDV 301
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV-----QFHRSSCWLW 899
GSLTTPPC V+WTVF V Q H S LW
Sbjct: 302 SALLPSDLSRYFRYEGSLTTPPCAQGVIWTVFNQTVKLSAKQLHTLSDSLW 352
>ref|XP_002692875.1| PREDICTED: carbonic anhydrase XIII [Bos taurus].
Length = 262
Score = 130 bits (328), Expect = 1e-30
Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 6/223 (2%)
Frame = +3
Query: 219 LNGSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQ 398
++G W Y +G W++ +P G QSPI++ ++Y++SL PL G A+
Sbjct: 1 MSGFSWGYGERDGPVHWNEFFPIADGDQQSPIEIKTKEVRYDSSLRPL---GIKYDASSA 57
Query: 399 FVLTNNGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHF 560
+++N+GHS + F+D + L Y Q HLHWG ++ HGSEH + G +
Sbjct: 58 KIISNSGHSFNVD-FDDTDDKSVLRGGPLTGSYRLRQFHLHWGSTDD-HGSEHVVDGVRY 115
Query: 561 AAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKV 740
AAELH+V++NSD YP+ A+ +P+GLAVL + +++G NP KI L +K K ++
Sbjct: 116 AAELHVVHWNSDKYPSFVEAAHEPDGLAVLGIFLQIGEHNPQLQKITDILDSIKEKGKQT 175
Query: 741 HIPGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
F GSLT PP +V W + + P+
Sbjct: 176 RFTNFD-PVCLLPPCRDYWTYPGSLTVPPLLESVTWIILKQPI 217
>ref|XP_002692874.1| PREDICTED: carbonic anhydrase 1-like [Bos taurus].
Length = 261
Score = 129 bits (323), Expect = 6e-30
Identities = 78/218 (35%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y G NG + W K YP G QSPID+ + + SL PL+ YN ++ V N
Sbjct: 6 WGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSLKPLSVS-YNPATAKEIV--N 62
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + FED + L Y Q H HWG ++ GSEH + G F+AELH
Sbjct: 63 VGHSFHVN-FEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDC-GSEHLVDGAKFSAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NS YP+ + A+ K +GLA++ VL+++G NP+ K+ L VK K++K F
Sbjct: 121 LVHWNSAKYPSFADAASKADGLALIGVLVKVGQANPNLQKVLDALKAVKNKNKKAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP H +V W +F+ +
Sbjct: 181 D-PSVLLPPSLDYWAYSGSLTHPPLHESVTWIIFKETI 217
>ref|XP_001250684.1| PREDICTED: carbonic anhydrase 1-like [Bos taurus].
Length = 261
Score = 129 bits (323), Expect = 6e-30
Identities = 78/218 (35%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y G NG + W K YP G QSPID+ + + SL PL+ YN ++ V N
Sbjct: 6 WGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSLKPLSVS-YNPATAKEIV--N 62
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + FED + L Y Q H HWG ++ GSEH + G F+AELH
Sbjct: 63 VGHSFHVN-FEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDC-GSEHLVDGAKFSAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NS YP+ + A+ K +GLA++ VL+++G NP+ K+ L VK K++K F
Sbjct: 121 LVHWNSAKYPSFADAASKADGLALIGVLVKVGQANPNLQKVLDALKAVKNKNKKAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP H +V W +F+ +
Sbjct: 181 D-PSVLLPPSLDYWAYSGSLTHPPLHESVTWIIFKETI 217
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 47,180,138
Number of extensions: 1492505
Number of successful extensions: 5897
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 5774
Number of HSP's successfully gapped: 27
Length of query: 351
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 248
Effective length of database: 14,273,310
Effective search space: 3539780880
Effective search space used: 3539780880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008625
(1054 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535507.2| PREDICTED: similar to carbonic anhydrase XII is... 370 e-102
Alignment gi|XP_540298.2| PREDICTED: similar to carbonic anhydrase XIV pr... 206 2e-53
Alignment gi|NP_001002999.1| carbonic anhydrase 6 precursor [Canis lupus ... 157 2e-38
Alignment gi|NP_001138646.1| carbonic anhydrase 9 [Canis lupus familiaris]. 146 3e-35
Alignment gi|XP_544159.1| PREDICTED: similar to Carbonic anhydrase XIII (... 129 6e-30
Alignment gi|NP_001138643.1| carbonic anhydrase 1 [Canis lupus familiaris]. 121 1e-27
Alignment gi|XP_546892.2| PREDICTED: similar to Carbonic anhydrase VII (C... 118 8e-27
Alignment gi|NP_001138642.1| carbonic anhydrase 2 [Canis lupus familiaris]. 114 2e-25
Alignment gi|XP_537711.2| PREDICTED: similar to Carbonic anhydrase IV pre... 113 3e-25
Alignment gi|XP_539545.2| PREDICTED: similar to Receptor-type tyrosine-pr... 112 8e-25
>ref|XP_535507.2| PREDICTED: similar to carbonic anhydrase XII isoform 1 precursor
[Canis familiaris].
Length = 381
Score = 370 bits (949), Expect = e-102
Identities = 184/271 (67%), Positives = 210/271 (77%), Gaps = 2/271 (0%)
Frame = +3
Query: 246 GPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTNNGHS 425
GPNGEKSWS+ YPSCGG+LQSPIDLH DILQY+ASLVPL FQGYN +AN+QF+LTN+GHS
Sbjct: 63 GPNGEKSWSEKYPSCGGVLQSPIDLHNDILQYDASLVPLGFQGYNVSANEQFILTNDGHS 122
Query: 426 VKLKLFEDMHIQGLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYP 605
V+L L DMHIQGL RY A+QLHLHWG+QN+PHGSEHT+ GKHFAAELHIV++NSDLYP
Sbjct: 123 VRLNLVPDMHIQGLRSRYTATQLHLHWGNQNDPHGSEHTVAGKHFAAELHIVHYNSDLYP 182
Query: 606 NASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGFSIXXXXXXXX 785
NAS AS+K EGLAVLAVLIEMGSFNPSYDKIF HL DV+YK Q+V IPGFSI
Sbjct: 183 NASAASNKSEGLAVLAVLIEMGSFNPSYDKIFRHLQDVRYKGQEVLIPGFSIEELLPERP 242
Query: 786 XXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAHTWM--TRPQRDGPQL 959
GSLTTPPCHPTVLWTVFRNPVQ + L ++ +T++ P+
Sbjct: 243 EEYYRYKGSLTTPPCHPTVLWTVFRNPVQISQEQL-LALETALYYTYVDDPSPREMVNNF 301
Query: 960 PGKQKFDERLVYVSFQTVPDSTYAGLNLGII 1052
QKFDER VY SF+ V D TYAGL+LGII
Sbjct: 302 RRVQKFDERQVYTSFRQVQDLTYAGLSLGII 332
>ref|XP_540298.2| PREDICTED: similar to carbonic anhydrase XIV precursor [Canis
familiaris].
Length = 337
Score = 206 bits (525), Expect = 2e-53
Identities = 98/214 (45%), Positives = 137/214 (64%), Gaps = 1/214 (0%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
WTY+GP+G+ W S+P CG QSPID+ D + ++ L L QGY++ + L N
Sbjct: 23 WTYVGPHGQDHWPASHPECGSNAQSPIDIQTDSVTFDPELPALQLQGYDQPGTEPLDLHN 82
Query: 414 NGHSVKLKLFEDMHIQGLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVYFNS 593
NGH+V+L L M+++GL +Y A+QLHLHWG+ GSEH I G+ AAELHIV+++S
Sbjct: 83 NGHTVQLSLPPTMYLEGLPRKYVAAQLHLHWGETGSLRGSEHQINGEATAAELHIVHYDS 142
Query: 594 DLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSIXXX 770
D Y + A+ KP+GLAVL +LIE+G + NP Y+ I SHL ++++KDQK +P F++
Sbjct: 143 DSYDSLGEAAPKPQGLAVLGILIEVGEAKNPVYEHILSHLHEIRHKDQKTSVPPFNVGEL 202
Query: 771 XXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQ 872
GSLTTPPC+ +VLWTVF Q
Sbjct: 203 LPPQLNQFFRYNGSLTTPPCYQSVLWTVFNRRAQ 236
>ref|NP_001002999.1| carbonic anhydrase 6 precursor [Canis lupus familiaris].
Length = 320
Score = 157 bits (396), Expect = 2e-38
Identities = 93/238 (39%), Positives = 122/238 (51%), Gaps = 5/238 (2%)
Frame = +3
Query: 222 NGSKWTYL-GPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQ 398
+GS WTY G + W + YP+CGG QSPIDL +QYN SL L GY +
Sbjct: 19 HGSLWTYSEGALDQVHWPREYPTCGGTRQSPIDLQRRKVQYNPSLKALKLTGYRIQVG-E 77
Query: 399 FVLTNNGHSVKLKLFEDMHIQGL-GHRYNASQLHLHWGD-QNEPHGSEHTIGGKHFAAEL 572
F + NNGH+V++ L M + G Y A Q+H HWG +E GSEHTI G F AE+
Sbjct: 78 FPMINNGHTVQISLPPTMRMMASDGTEYIAQQMHFHWGGASSEISGSEHTIDGIRFVAEI 137
Query: 573 HIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSF--NPSYDKIFSHLPDVKYKDQKVHI 746
HIV++NS Y + IA +P+GLAVLA L+++ + N Y SHL +++Y Q +
Sbjct: 138 HIVHYNSK-YKSYDIAQHEPDGLAVLAALVKVEDYGENTYYSNFISHLNNIRYPGQSTVL 196
Query: 747 PGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAH 920
G I GSLTTPPC V W V + V+ W S H
Sbjct: 197 SGLDIEDMLPENTHHYYTYRGSLTTPPCTENVHWFVLVHHVRLSSIQTWKLENSILDH 254
>ref|NP_001138646.1| carbonic anhydrase 9 [Canis lupus familiaris].
Length = 461
Score = 146 bits (369), Expect = 3e-35
Identities = 84/231 (36%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Frame = +3
Query: 228 SKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVL 407
S W Y G+ W + P+C G QSP+D+ + + +L PL G+ + L
Sbjct: 139 SHWRY---GGDPPWPQVSPACAGRFQSPVDIRPQLAALSPALPPLELLGFELPPLPELRL 195
Query: 408 TNNGHSVKLKLFEDMHIQ-GLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
NNGH+V+L L + + G G Y A QLHLHWG P GSEHT+ G F AE+H+V+
Sbjct: 196 RNNGHTVQLTLPPGLEMALGPGREYRALQLHLHWGAAGRP-GSEHTVDGHRFPAEIHVVH 254
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
S + A +P GLAVLA ++ G N +Y+++ SHL ++ +D + +PG +
Sbjct: 255 I-STAFAKVEEALGRPGGLAVLAAFLQEGPEENSAYEQLLSHLEEITEEDSETWVPGLDV 313
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV-----QFHRSSCWLW 899
GSLTTPPC V+WTVF V Q H S LW
Sbjct: 314 SALLPSDLSRYFRYEGSLTTPPCAQGVIWTVFNQTVRLSAKQLHTLSGSLW 364
>ref|XP_544159.1| PREDICTED: similar to Carbonic anhydrase XIII (Carbonate
dehydratase XIII) (CA-XIII) [Canis familiaris].
Length = 279
Score = 129 bits (323), Expect = 6e-30
Identities = 79/235 (33%), Positives = 118/235 (50%), Gaps = 7/235 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
WT +G W+K +P G QSPI++ ++Y++SL PL+ + AN +++N
Sbjct: 23 WTKNQKSGPIHWNKFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIK---YDANSAKIISN 79
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
+GHS + F+D + L Y Q HLHWG ++ HGSEH + G +AAELH
Sbjct: 80 SGHSFSVD-FDDTEDKSVLRGGPLTGSYRLRQFHLHWGSADD-HGSEHVVDGVRYAAELH 137
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NSD YP+ A+ +P+GLAVL V +++G N KI L +K K ++ F
Sbjct: 138 VVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIGEHNSQLQKITDILDSIKEKGKQTRFTNF 197
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQ-SCTA 917
GSLT PP +V W V + P+ +R CTA
Sbjct: 198 D-PLSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLATFRTLLCTA 251
>ref|NP_001138643.1| carbonic anhydrase 1 [Canis lupus familiaris].
Length = 261
Score = 121 bits (303), Expect = 1e-27
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 6/223 (2%)
Frame = +3
Query: 219 LNGSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQ 398
++ S W Y NG + W K YP G QSPID+ +++ SL P++ YN ++
Sbjct: 1 MSSSNWGYDDKNGPEQWGKLYPIANGNNQSPIDIKTSETKHDTSLKPISVS-YNPATAKE 59
Query: 399 FVLTNNGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHF 560
+ N GHS + +ED + L Y SQ H HWG N+ +GSEHT+ G +
Sbjct: 60 II--NVGHSFHVN-YEDHDDRSVLKGGPLSASYRLSQFHFHWGSTND-YGSEHTVDGVKY 115
Query: 561 AAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKV 740
+ ELHIV++NS Y + + A + +GLA++AVL+++ NP K+ L VK K+++
Sbjct: 116 SGELHIVHWNSSKYSSFAEAVSQADGLAIIAVLMKIDQANPKLQKVLDALNAVKTKNKRA 175
Query: 741 HIPGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
F GSLT PP + +V W + ++ +
Sbjct: 176 PFTNFD-PSILLPSSLDYWTYNGSLTHPPLYESVSWIICKDSI 217
>ref|XP_546892.2| PREDICTED: similar to Carbonic anhydrase VII (Carbonate dehydratase
VII) (CA-VII) [Canis familiaris].
Length = 278
Score = 118 bits (296), Expect = 8e-27
Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Frame = +3
Query: 249 PNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSV 428
P G W K YP G QSPI++ Y+ SL PL + A +TNNGHSV
Sbjct: 26 PAGPSQWHKLYPIAQGDRQSPINIVSSQAVYSPSLKPLEL---SYEACISLSITNNGHSV 82
Query: 429 KLKLFEDMH----IQG--LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVYFN 590
++ F D + G L Y QLH HWG ++ GSEHT+ GK F +ELH+V++N
Sbjct: 83 QVD-FNDSDDRTAVTGGPLDGPYRLKQLHFHWGKKHSV-GSEHTVDGKSFPSELHLVHWN 140
Query: 591 SDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGFSIXXX 770
+ Y A+ P+GLAV+ + +E G +PS +++ L V++K K F+
Sbjct: 141 AKKYSTFGEAASAPDGLAVVGIFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCFN-PKC 199
Query: 771 XXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLTTPP +V W V R P+
Sbjct: 200 LLPASRHYWTYPGSLTTPPLSESVTWIVLREPI 232
>ref|NP_001138642.1| carbonic anhydrase 2 [Canis lupus familiaris].
Length = 260
Score = 114 bits (284), Expect = 2e-25
Identities = 72/218 (33%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG + W K +P G QSP+D+ ++ +L L Y++ +Q+ + N
Sbjct: 5 WGYAKHNGPEHWHKDFPIAKGERQSPVDIDTKAAVHDPALKSLC-PCYDQAVSQRII--N 61
Query: 414 NGHSVKLKLFEDMH----IQG--LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
NGHS ++ F+D ++G L Y Q H HWG ++ GSEHT+ K +AAELH
Sbjct: 62 NGHSFNVE-FDDSQDKTVLKGGPLTGTYRLIQFHFHWGS-SDGQGSEHTVDKKKYAAELH 119
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++N+ Y A +P+GLAVL + +++G NP KI L +K K + F
Sbjct: 120 LVHWNTK-YGEFGKAVQQPDGLAVLGIFLKIGGANPGLQKILDALDSIKTKGKSADFTNF 178
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLTTPP V W V + P+
Sbjct: 179 D-PRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPI 215
>ref|XP_537711.2| PREDICTED: similar to Carbonic anhydrase IV precursor (Carbonate
dehydratase IV) (CA-IV) [Canis familiaris].
Length = 336
Score = 113 bits (282), Expect = 3e-25
Identities = 77/217 (35%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Frame = +3
Query: 252 NGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSVK 431
+G W + C QSPI++ Q +++L P +F GY++ QQ+ + NNGHSV
Sbjct: 61 SGPSQWGED---CQKSRQSPINIDTTEAQVDSNLGPFSFSGYDK--KQQWRVQNNGHSVM 115
Query: 432 LKLFEDMHIQG--LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVYFNSDL-Y 602
+ L ++ I G L +Y A QLHLHW ++ + GSEHTI G FA E+HIV+
Sbjct: 116 VLLDQEASIAGGGLSTQYRALQLHLHWSEEMDG-GSEHTINGNRFAMEMHIVHEKEKRPL 174
Query: 603 PNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQ----KVHIPGFSIXXX 770
N A D + +AVLA L+E GS N + + L V K I F +
Sbjct: 175 ENEKEAQDSKDEIAVLAFLVEAGSENDGFQPLVDTLSSVPRPKMNTTMKESISLFDLLPK 234
Query: 771 XXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHR 881
GSLTTP C V+WTVF+ ++ HR
Sbjct: 235 KEKLRHYYRYL-GSLTTPGCQEKVVWTVFQERIKLHR 270
>ref|XP_539545.2| PREDICTED: similar to Receptor-type tyrosine-protein phosphatase
zeta precursor (R-PTP-zeta) [Canis familiaris].
Length = 1926
Score = 112 bits (279), Expect = 8e-25
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 4/213 (1%)
Frame = +3
Query: 258 EKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSVKLK 437
+K+W K YP+C QSPI++ D+ Q N +L L FQG+++T+ + + N G +V++
Sbjct: 63 QKNWGKKYPTCSSPKQSPINIDEDLTQVNVNLKKLKFQGWDKTSLENTFIHNTGKTVEIN 122
Query: 438 LFEDMHIQGLGHR--YNASQLHLHWGDQN-EPHGSEHTIGGKHFAAELHIVYFNSDLYPN 608
L D + G + AS++ HWG N GSEH++ G+ F E+ I F++D + +
Sbjct: 123 LTNDYRLSGGVSEMVFKASKISFHWGKCNMSSEGSEHSLEGQKFPLEMQIYCFDADRFSS 182
Query: 609 ASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSIXXXXXXXX 785
A L L+VL E+G N Y I + V ++ + F +
Sbjct: 183 FEEAVKAKGKLRALSVLFEVGMEENLDYKAIIDGVESVSRFGKQAALDPFILLNLLPNST 242
Query: 786 XXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRS 884
GSLT+PPC TV W +F++ V S
Sbjct: 243 DKYYTYNGSLTSPPCTDTVDWIIFKDTVSISES 275
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 48,987,605
Number of extensions: 1519949
Number of successful extensions: 5702
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 5630
Number of HSP's successfully gapped: 22
Length of query: 351
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 247
Effective length of database: 15,407,560
Effective search space: 3805667320
Effective search space used: 3805667320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008625
(1054 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001927362.3| PREDICTED: carbonic anhydrase 12-like, parti... 236 1e-62
Alignment gi|XP_001924916.3| PREDICTED: carbonic anhydrase 14-like [Sus s... 203 1e-52
Alignment gi|XP_001925555.2| PREDICTED: carbonic anhydrase 9 [Sus scrofa]. 152 3e-37
Alignment gi|NP_001137588.1| carbonic anhydrase 6 [Sus scrofa]. 150 1e-36
Alignment gi|XP_001929064.3| PREDICTED: ras-related protein Rab-8B-like [... 130 2e-30
Alignment gi|XP_001924218.1| PREDICTED: carbonic anhydrase 1 [Sus scrofa]. 127 1e-29
Alignment gi|XP_001924497.2| PREDICTED: carbonic anhydrase 13 [Sus scrofa]. 125 3e-29
Alignment gi|XP_001927840.1| PREDICTED: carbonic anhydrase 2 [Sus scrofa]. 124 1e-28
Alignment gi|XP_003134783.1| PREDICTED: receptor-type tyrosine-protein ph... 122 3e-28
Alignment gi|XP_003355077.1| PREDICTED: carbonic anhydrase 3-like [Sus sc... 117 1e-26
>ref|XP_001927362.3| PREDICTED: carbonic anhydrase 12-like, partial [Sus scrofa].
Length = 189
Score = 236 bits (603), Expect = 1e-62
Identities = 125/182 (68%), Positives = 129/182 (70%), Gaps = 2/182 (1%)
Frame = +3
Query: 507 GDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPS 686
GDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPS
Sbjct: 1 GDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPS 60
Query: 687 YDKIFSHLPDVKYKDQKVHIPGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNP 866
YDKIFSHLPDVKYKDQKVHIPGFSI GSLTTPPCHPTVLWTVFRNP
Sbjct: 61 YDKIFSHLPDVKYKDQKVHIPGFSIEELLPERPEEYYRYRGSLTTPPCHPTVLWTVFRNP 120
Query: 867 VQFHRSSCWLWRQ--SCTAHTWMTRPQRDGPQLPGKQKFDERLVYVSFQTVPDSTYAGLN 1040
VQ + CT H P+ QKFDERLVYVSF+ G
Sbjct: 121 VQISQEQLLALETVLYCT-HMDDPSPREMVNNFRQVQKFDERLVYVSFRQDETGRLKGAG 179
Query: 1041 LG 1046
+G
Sbjct: 180 VG 181
>ref|XP_001924916.3| PREDICTED: carbonic anhydrase 14-like [Sus scrofa].
Length = 340
Score = 203 bits (517), Expect = 1e-52
Identities = 97/222 (43%), Positives = 140/222 (63%), Gaps = 5/222 (2%)
Frame = +3
Query: 222 NGSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQF 401
+G WTY GP+G+ W SYP CG QSPI++ D + ++ L+PL GY + +
Sbjct: 18 DGQHWTYEGPHGQDHWPASYPECGSNAQSPINIQTDSVTFDPELLPLQPHGYEQPGTEPL 77
Query: 402 VLTNNGHSVK----LKLFEDMHIQGLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAE 569
L NNGH+ K L L +H++GL +Y A+QLHLHWG + P GSEH I G+ AAE
Sbjct: 78 DLHNNGHTGKNAXQLSLPPTLHLEGLPRKYVAAQLHLHWGQKGSPGGSEHKINGEATAAE 137
Query: 570 LHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHI 746
LHIV+++S+ Y + S A+ +P+GLAVL +L+E+G + NP+Y+ I SHL ++++KDQ+ +
Sbjct: 138 LHIVHYDSESYASLSEAAQQPQGLAVLGILVEVGETENPAYEHILSHLHEIRHKDQRTSV 197
Query: 747 PGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQ 872
P F++ GSLTTPPC+ +VLWTVF Q
Sbjct: 198 PPFNVRGLLPPLLAQFFRYNGSLTTPPCYQSVLWTVFNRRAQ 239
>ref|XP_001925555.2| PREDICTED: carbonic anhydrase 9 [Sus scrofa].
Length = 442
Score = 152 bits (384), Expect = 3e-37
Identities = 90/268 (33%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Frame = +3
Query: 228 SKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVL 407
S W Y G W + P+C G QSP+D+ + + +L PL GY + L
Sbjct: 120 SHWRY---GGAPPWPQVSPACAGRFQSPVDIRPQLTAFCPALRPLELLGYELPPQPELRL 176
Query: 408 TNNGHSVKLKLFEDMHIQ-GLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
NNGH+V+L L + + G G Y A QLHLHWG P GSEHT+GG F AE+H+V+
Sbjct: 177 RNNGHTVQLSLPPGLELSLGPGQEYRALQLHLHWGSAGRP-GSEHTVGGYRFPAEIHVVH 235
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
S + A +P GLAVLA ++ G N +Y+++ SHL ++ +D + +PG +
Sbjct: 236 L-STAFAKIDEALGRPRGLAVLAAFLQEGPEENSAYEQLLSHLGEIADEDSETWVPGLDV 294
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAHTWMTRPQ 941
GSLTTPPC V+WTVF V+ + + W
Sbjct: 295 SALLPSDLNRYFRYEGSLTTPPCAQGVVWTVFNETVKLSAKQL----HTLSDSLWGPDDS 350
Query: 942 RDGPQLPGKQKFDERLVYVSFQTVPDST 1025
R Q + R++ SF T DS+
Sbjct: 351 RLQLNFRATQPLNGRIIEASFSTEVDSS 378
>ref|NP_001137588.1| carbonic anhydrase 6 [Sus scrofa].
Length = 317
Score = 150 bits (378), Expect = 1e-36
Identities = 95/277 (34%), Positives = 138/277 (49%), Gaps = 11/277 (3%)
Frame = +3
Query: 222 NGSKWTYL-GPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQ 398
+G++WTY G E WS+ YP C G QSPID+ +QYN +L L+ GY E +
Sbjct: 19 HGAEWTYSDGELDEAHWSREYPDCDGRRQSPIDVQRKSVQYNPALRALSLTGY-EAQEGE 77
Query: 399 FVLTNNGHSVKLKLFEDMHIQGL-GHRYNASQLHLHWGDQ-NEPHGSEHTIGGKHFAAEL 572
F + NNGH+V++ L M + G +Y A Q+H HWG +E GSEHTI G + E+
Sbjct: 78 FSMINNGHTVQISLPSTMRLTAPDGTQYIAKQMHFHWGGAFSEISGSEHTIDGIRYVTEV 137
Query: 573 HIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSF--NPSYDKIFSHLPDVKYKDQKVHI 746
H+V++NS Y + A P+GLAVLA L E+ + N Y SHL +++ Q +
Sbjct: 138 HVVHYNSK-YKSYDEAQTAPDGLAVLAALFEIKDYAENTYYSDFISHLKNIRIPGQTTVL 196
Query: 747 PGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCW------LWRQS 908
++ GSLTTPPC V W V + V+ R+ W L Q+
Sbjct: 197 SSLNLQDMLPENLHSYYSYQGSLTTPPCTENVHWFVLADTVKLSRTQVWKLQNSLLNDQN 256
Query: 909 CTAHTWMTRPQRDGPQLPGKQKFDERLVYVSFQTVPD 1019
T H R Q + R+V +F+++P+
Sbjct: 257 KTIHNDYRR----------TQPLNHRVVEANFKSLPN 283
>ref|XP_001929064.3| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa].
Length = 283
Score = 130 bits (326), Expect = 2e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 246 GPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTNNGHS 425
GPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTNNGHS
Sbjct: 58 GPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTNNGHS 117
>ref|XP_001924218.1| PREDICTED: carbonic anhydrase 1 [Sus scrofa].
Length = 261
Score = 127 bits (318), Expect = 1e-29
Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y G G + WSK YP G QSPID+ +++ SL P++ YN ++ + N
Sbjct: 6 WGYDGEYGPEHWSKVYPIANGNNQSPIDIKTSETKHDTSLKPISVS-YNPATAKEII--N 62
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + FED + L Y Q H HWG + + +GSEH + G ++AELH
Sbjct: 63 VGHSFHVN-FEDNDNRSVLKDGPLSESYRLLQFHFHWG-KTDDYGSEHLVDGAKYSAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
IV++NS Y +A+ A+ +GLA++ VL+++G NP+ K+ L +KYK +K F
Sbjct: 121 IVHWNSAKYSSAAEAASHADGLAIIGVLVKVGQANPNLQKVLDALKGIKYKGKKAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP H +V W + + +
Sbjct: 181 D-PSVLLPSSLDYWTYFGSLTHPPLHESVNWIILKENI 217
>ref|XP_001924497.2| PREDICTED: carbonic anhydrase 13 [Sus scrofa].
Length = 243
Score = 125 bits (315), Expect = 3e-29
Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG W++ +P G QSPI++ ++Y++SL PL+ + +A +++N
Sbjct: 6 WGYGEHNGPVHWNEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSAK---IISN 62
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
+GHS + F+D + L Y Q HLHWG ++ HGSEH + G +AAELH
Sbjct: 63 SGHSFSVD-FDDTEDKSVLRGGPLTGSYRLRQFHLHWGSADD-HGSEHVVDGVKYAAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NSD YP+ A+ +P+GLAVL V +++G N KI L +K K ++ F
Sbjct: 121 VVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIGEHNSQLQKITDILDSIKEKGKQTRFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP +V W + + P+
Sbjct: 181 D-PLSLLPPSWDYWTYPGSLTVPPLLESVTWIILKQPI 217
>ref|XP_001927840.1| PREDICTED: carbonic anhydrase 2 [Sus scrofa].
Length = 260
Score = 124 bits (310), Expect = 1e-28
Identities = 76/218 (34%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG + W K +P G QSP+D++ ++ +L PL+ Y + +Q+ V N
Sbjct: 5 WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLC-YEQATSQRIV--N 61
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
NGHS ++ F+ +G L Y Q H HWG ++ GSEHT+ K +AAELH
Sbjct: 62 NGHSFNVE-FDSSQDKGVLEGGPLAGTYRLIQFHFHWGS-SDGQGSEHTVDKKKYAAELH 119
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++N+ Y + A+ +P+GLAVL V +++G+ P KI L +K K + V GF
Sbjct: 120 LVHWNTK-YKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGF 178
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLTTPP +V W V R P+
Sbjct: 179 D-PRDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPI 215
>ref|XP_003134783.1| PREDICTED: receptor-type tyrosine-protein phosphatase zeta [Sus
scrofa].
Length = 2323
Score = 122 bits (307), Expect = 3e-28
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 4/221 (1%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W+Y G +K+W K YP+C QSPI++ D+ Q N +L L FQG+++T+ + + N
Sbjct: 38 WSYTGALNQKNWGKKYPTCNSPKQSPINIDEDLTQVNVNLKKLKFQGWDKTSLENTFIHN 97
Query: 414 NGHSVKLKLFEDMHIQGLGHR--YNASQLHLHWGDQN-EPHGSEHTIGGKHFAAELHIVY 584
G +V++ L D + G + AS++ HWG N GSEH++ G+ F E+ I
Sbjct: 98 TGKTVEINLTNDYRLSGGVSEIVFKASKITFHWGKCNMSSDGSEHSLEGQKFPLEMQIYC 157
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
F++D +P+ A L L++L E+G N Y I + V ++ + F++
Sbjct: 158 FDADRFPSFEEAVKGKGKLRALSILFEVGMEENLDYKAIIDGVESVSRFGKQAALDPFTL 217
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRS 884
GSLT+PPC TV W VF++ V S
Sbjct: 218 LNLLPNSTDKYYTYNGSLTSPPCTDTVDWIVFKDTVSISES 258
>ref|XP_003355077.1| PREDICTED: carbonic anhydrase 3-like [Sus scrofa].
Length = 260
Score = 117 bits (293), Expect = 1e-26
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG + W K +P G QSP+D++ ++ +L PL+ Y + +Q+ V N
Sbjct: 5 WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLC-YEQATSQRIV--N 61
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
NGHS ++ F+ +G L Y Q HLHWG ++ HGSEHT+ G +AAELH
Sbjct: 62 NGHSFNVE-FDSSQDKGVLRGGPLTAAYRLRQFHLHWGSSDD-HGSEHTVDGVKYAAELH 119
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NS Y + + A P+G+AV+ + +++G + + L +K K ++ F
Sbjct: 120 LVHWNSK-YNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNF 178
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
+ GS TTPPC ++W + + P+
Sbjct: 179 N-PSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPI 215
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 30,454,020
Number of extensions: 960226
Number of successful extensions: 3740
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 3679
Number of HSP's successfully gapped: 18
Length of query: 351
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 251
Effective length of database: 8,854,232
Effective search space: 2222412232
Effective search space used: 2222412232
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008625
(1054 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_848483.3| carbonic anhydrase 12 precursor [Mus musculus]. 362 e-100
Alignment gi|NP_035927.1| carbonic anhydrase 14 precursor [Mus musculus]. 204 9e-53
Alignment gi|NP_647466.2| carbonic anhydrase 9 precursor [Mus musculus]. 149 4e-36
Alignment gi|NP_033932.2| carbonic anhydrase 6 precursor [Mus musculus]. 140 2e-33
Alignment gi|NP_001077426.1| carbonic anhydrase 1 [Mus musculus]. 136 2e-32
Alignment gi|NP_033929.2| carbonic anhydrase 1 [Mus musculus]. 136 2e-32
Alignment gi|NP_078771.1| carbonic anhydrase 13 [Mus musculus]. 127 2e-29
Alignment gi|NP_444300.1| carbonic anhydrase 7 [Mus musculus]. 124 2e-28
Alignment gi|NP_085035.1| carbonic anhydrase 15 precursor [Mus musculus]. 119 4e-27
Alignment gi|NP_033931.4| carbonic anhydrase 2 [Mus musculus]. 118 9e-27
>ref|NP_848483.3| carbonic anhydrase 12 precursor [Mus musculus].
Length = 354
Score = 362 bits (928), Expect = e-100
Identities = 190/307 (61%), Positives = 218/307 (71%), Gaps = 3/307 (0%)
Frame = +3
Query: 141 MPHRNXXXXXXXXXXXXKEQPSSPAPLNGSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDL 320
MPHR+ K+QPSS APLNGSKWTY+GP GEK+WSK YPSCGGLLQSPIDL
Sbjct: 1 MPHRSLRATVVLLLVILKKQPSSSAPLNGSKWTYVGPAGEKNWSKKYPSCGGLLQSPIDL 60
Query: 321 HGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSVKLKLFEDMHIQGLG-HRYNASQLH 497
H DILQY+ASL PL FQGYN + + LTN+GHSV+L L DM+IQGL H Y A QLH
Sbjct: 61 HSDILQYDASLAPLQFQGYNVSVEKLLNLTNDGHSVRLNLNSDMYIQGLQPHHYRAEQLH 120
Query: 498 LHWGDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSF 677
LHWG++N+PHGSEHT+ GKHFAAELHIV++NSDLYP+ S ASDK EGLAVLAVLIE+GS
Sbjct: 121 LHWGNRNDPHGSEHTVSGKHFAAELHIVHYNSDLYPDFSTASDKSEGLAVLAVLIEIGSA 180
Query: 678 NPSYDKIFSHLPDVKYKDQKVHIPGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVF 857
NPSYDKIFSHL VKYK Q+V IPGF+I GSLTTPPC+PTVLWTVF
Sbjct: 181 NPSYDKIFSHLQHVKYKGQQVLIPGFNIEELLPESPGEYYRYEGSLTTPPCYPTVLWTVF 240
Query: 858 RNPVQFHRSSCWLWRQSCTAHTWM--TRPQRDGPQLPGKQKFDERLVYVSFQTVPDSTYA 1031
RNPVQ + L ++ T M P+ QKFDERLVY+SF+ T
Sbjct: 241 RNPVQISQEQL-LALETALYFTHMDDPTPREMINNFRQVQKFDERLVYISFRQ-GLLTNT 298
Query: 1032 GLNLGII 1052
GL+LGII
Sbjct: 299 GLSLGII 305
>ref|NP_035927.1| carbonic anhydrase 14 precursor [Mus musculus].
Length = 337
Score = 204 bits (519), Expect = 9e-53
Identities = 111/282 (39%), Positives = 162/282 (57%), Gaps = 6/282 (2%)
Frame = +3
Query: 225 GSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFV 404
G WTY GP+G+ W SYP CGG QSPI++ D + ++ L + GY++ +
Sbjct: 19 GHHWTYEGPHGQDHWPTSYPECGGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLD 78
Query: 405 LTNNGHSVKLKLFEDMHIQGLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
L NNGH+V+L L +H+ GL +Y A+QLHLHWG + GSEH I + AAELH+V+
Sbjct: 79 LHNNGHTVQLSLPPTLHLGGLPRKYTAAQLHLHWGQRGSLEGSEHQINSEATAAELHVVH 138
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
++S Y + S A+ KP+GLAVL +LIE+G + NP+YD I S L +++YKDQK +P FS+
Sbjct: 139 YDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSRLHEIRYKDQKTSVPPFSV 198
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTA-HTWMTRP 938
GSLTTPPC+ +VLWTVF Q +++ ++ + P
Sbjct: 199 RELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSSTEEDPSEP 258
Query: 939 QRDGPQLPGKQKFDERLVYVSF-QTVPDST---YAGLNLGII 1052
++P Q ++R ++ SF Q P T GL +GI+
Sbjct: 259 LVQNYRVP--QPLNQRTIFASFIQAGPLYTTGEMLGLGVGIL 298
>ref|NP_647466.2| carbonic anhydrase 9 precursor [Mus musculus].
Length = 437
Score = 149 bits (376), Expect = 4e-36
Identities = 90/268 (33%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Frame = +3
Query: 228 SKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVL 407
S W+Y G W + P+C G QSP+D+ + + +L PL GY + L
Sbjct: 118 SHWSY---GGTLLWPQVSPACAGRFQSPVDIRLERTAFCRTLQPLELLGYELQPLPELSL 174
Query: 408 TNNGHSVKLKLFEDMHIQ-GLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
+NNGH+V+L L + + G G Y A QLHLHWG + P GSEHT+ G F AE+H+V+
Sbjct: 175 SNNGHTVQLTLPPGLKMALGPGQEYRALQLHLHWGTSDHP-GSEHTVNGHRFPAEIHVVH 233
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLI-EMGSFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
S + A +P GLAVLA + E N +Y+++ SHL ++ + K+ IPG +
Sbjct: 234 L-STAFSELHEALGRPGGLAVLAAFLQESPEENSAYEQLLSHLEEISEEGSKIEIPGLDV 292
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAHTWMTRPQ 941
GSLTTPPC V+WTVF V+ + + W R
Sbjct: 293 SALLPSDLSRYYRYEGSLTTPPCSQGVIWTVFNETVKLSAKQL----HTLSVSLWGPRDS 348
Query: 942 RDGPQLPGKQKFDERLVYVSFQTVPDST 1025
R Q + R + SF DS+
Sbjct: 349 RLQLNFRATQPLNGRTIEASFPAAEDSS 376
>ref|NP_033932.2| carbonic anhydrase 6 precursor [Mus musculus].
Length = 317
Score = 140 bits (352), Expect = 2e-33
Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 6/225 (2%)
Frame = +3
Query: 228 SKWTYLGPNG--EKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQF 401
S W+Y G +G E WS+ YPSCGG QSPID+ + + +N SL PL+ Y E N +F
Sbjct: 19 SDWSYSGDDGVGESQWSEQYPSCGGERQSPIDVKTEEVMFNPSLKPLSLVNY-EKENLEF 77
Query: 402 VLTNNGHSVKLKLFEDMHIQ-GLGHRYNASQLHLHWGDQN-EPHGSEHTIGGKHFAAELH 575
+TNNGH+V + L M+++ G + + H HWG ++ E GSEHTI G E H
Sbjct: 78 TMTNNGHTVSIDLPPSMYLETSDGTEFISKAFHFHWGGRDWELSGSEHTIDGIRSIMEAH 137
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSF--NPSYDKIFSHLPDVKYKDQKVHIP 749
V+FN + Y A D+ GLAVLAVL ++ + N Y I S L +++ + +
Sbjct: 138 FVHFNKE-YGTYENAKDQKNGLAVLAVLFKIDEYAENTYYSDIISALKNIEKPGETTTLK 196
Query: 750 GFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRS 884
+I GSLTTPPC V W V R+ V ++
Sbjct: 197 DTTIRNLLPKDVHHYYTYPGSLTTPPCTENVQWFVLRDKVTLSKA 241
>ref|NP_001077426.1| carbonic anhydrase 1 [Mus musculus].
Length = 261
Score = 136 bits (343), Expect = 2e-32
Identities = 80/218 (36%), Positives = 113/218 (51%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG WSK YP G QSPID+ +++SL PL+ YN ++ V N
Sbjct: 6 WGYGSENGPDQWSKLYPIANGNNQSPIDIKTSEANHDSSLKPLSIS-YNPATAKEIV--N 62
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + +F+D Q L Y +Q H HWG+ N+ HGSEHT+ G ++ ELH
Sbjct: 63 VGHSFHV-IFDDSSNQSVLKGGPLADSYRLTQFHFHWGNSND-HGSEHTVDGTRYSGELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NS Y +AS A K +GLA+L VL+++G NPS K+ L VK K ++ F
Sbjct: 121 LVHWNSAKYSSASEAISKADGLAILGVLMKVGPANPSLQKVLDALNSVKTKGKRAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP H +V W + ++ +
Sbjct: 181 D-PSSLLPSSLDYWTYFGSLTHPPLHESVTWVICKDSI 217
>ref|NP_033929.2| carbonic anhydrase 1 [Mus musculus].
Length = 261
Score = 136 bits (343), Expect = 2e-32
Identities = 80/218 (36%), Positives = 113/218 (51%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG WSK YP G QSPID+ +++SL PL+ YN ++ V N
Sbjct: 6 WGYGSENGPDQWSKLYPIANGNNQSPIDIKTSEANHDSSLKPLSIS-YNPATAKEIV--N 62
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + +F+D Q L Y +Q H HWG+ N+ HGSEHT+ G ++ ELH
Sbjct: 63 VGHSFHV-IFDDSSNQSVLKGGPLADSYRLTQFHFHWGNSND-HGSEHTVDGTRYSGELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NS Y +AS A K +GLA+L VL+++G NPS K+ L VK K ++ F
Sbjct: 121 LVHWNSAKYSSASEAISKADGLAILGVLMKVGPANPSLQKVLDALNSVKTKGKRAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP H +V W + ++ +
Sbjct: 181 D-PSSLLPSSLDYWTYFGSLTHPPLHESVTWVICKDSI 217
>ref|NP_078771.1| carbonic anhydrase 13 [Mus musculus].
Length = 262
Score = 127 bits (318), Expect = 2e-29
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 7/235 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG W++ +P G QSPI++ ++Y++SL PL+ + +A +++N
Sbjct: 6 WGYGEHNGPIHWNELFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPASAK---IISN 62
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
+GHS + F+D + L Y Q HLHWG ++ HGSEH + G +AAELH
Sbjct: 63 SGHSFNVD-FDDTEDKSVLRGGPLTGNYRLRQFHLHWGSADD-HGSEHVVDGVRYAAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NSD YP+ A+ + +GLAVL V +++G NP KI L +K K ++ F
Sbjct: 121 VVHWNSDKYPSFVEAAHESDGLAVLGVFLQIGEHNPQLQKITDILDSIKEKGKQTRFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQ-SCTA 917
GSLT PP +V W V + P+ +R CTA
Sbjct: 181 D-PLCLLPSSWDYWTYPGSLTVPPLLESVTWIVLKQPISISSQQLARFRSLLCTA 234
>ref|NP_444300.1| carbonic anhydrase 7 [Mus musculus].
Length = 264
Score = 124 bits (310), Expect = 2e-28
Identities = 80/219 (36%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y +G +W K YP G QSPI++ Y+ SL PL + E A +TN
Sbjct: 7 WGYGQDDGPSNWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLEL--FYE-ACMSLSITN 63
Query: 414 NGHSVKLKLFEDMH----IQG--LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
NGHSV++ F D + G L Y QLH HWG + + GSEHT+ GK F +ELH
Sbjct: 64 NGHSVQVD-FNDSDDRTVVSGGPLEGPYRLKQLHFHWGKKRDM-GSEHTVDGKSFPSELH 121
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++N+ Y A+ P+GLAV+ V +E G +PS +++ L V++KD K F
Sbjct: 122 LVHWNAKKYSTFGEAAAAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKDTKAQFSCF 181
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQ 872
+ GSLTTPP +V W V R P++
Sbjct: 182 N-PKCLLPTSRHYWTYPGSLTTPPLSESVTWIVLREPIR 219
>ref|NP_085035.1| carbonic anhydrase 15 precursor [Mus musculus].
Length = 324
Score = 119 bits (298), Expect = 4e-27
Identities = 75/216 (34%), Positives = 109/216 (50%), Gaps = 11/216 (5%)
Frame = +3
Query: 255 GEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSVKL 434
G W + P+CGG QSPI++ ++Q + +L P FQGY+ +VL N+GH+V L
Sbjct: 35 GPAHWKELAPACGGPTQSPINIDLRLVQRDYTLKPFIFQGYDSAPQDPWVLENDGHTVLL 94
Query: 435 KLFEDMH----IQGLG---HRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVYFNS 593
++ I+G G Y QLH HWG GSEH++ KH + E+H+V+ N+
Sbjct: 95 RVNSCQQNCPAIRGAGLPSPEYRLLQLHFHWGSPGH-QGSEHSLDEKHGSMEMHMVHMNT 153
Query: 594 DLYPNASIASDKPEGLAVLAV-LIEMGSFNPSYDKIFSHLPDVKYKDQKVHIP---GFSI 761
Y + A +P+G A+LAV L+E N ++ I S L ++ V++ +
Sbjct: 154 K-YQSMEDARSQPDGFAILAVLLVEEDRDNTNFSAIVSGLKNLSSPGVAVNLTSTFALAS 212
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLTTP C P VLWTVF N V
Sbjct: 213 LLPSALRLLRYYRYSGSLTTPGCEPAVLWTVFENTV 248
>ref|NP_033931.4| carbonic anhydrase 2 [Mus musculus].
Length = 260
Score = 118 bits (295), Expect = 9e-27
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG ++W K +P G QSP+D+ Q++ +L PL Y++ A++ V N
Sbjct: 5 WGYSKHNGPENWHKDFPIANGDRQSPVDIDTATAQHDPALQPLLI-SYDKAASKSIV--N 61
Query: 414 NGHSVKLKLFEDMH----IQG--LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
NGHS ++ F+D ++G L Y Q H HWG ++ GSEHT+ K +AAELH
Sbjct: 62 NGHSFNVE-FDDSQDNAVLKGGPLSDSYRLIQFHFHWG-SSDGQGSEHTVNKKKYAAELH 119
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++N+ Y + A +P+GLAVL + +++G + K+ L +K K ++ F
Sbjct: 120 LVHWNTK-YGDFGKAVQQPDGLAVLGIFLKIGPASQGLQKVLEALHSIKTKGKRAAFANF 178
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLTTPP V W V R P+
Sbjct: 179 D-PCSLLPGNLDYWTYPGSLTTPPLLECVTWIVLREPI 215
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 40,643,650
Number of extensions: 1249824
Number of successful extensions: 4610
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 4539
Number of HSP's successfully gapped: 19
Length of query: 351
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 249
Effective length of database: 12,553,887
Effective search space: 3125917863
Effective search space used: 3125917863
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008625
(1054 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001209.1| carbonic anhydrase 12 isoform 1 precursor [Homo... 390 e-109
Alignment gi|NP_996808.1| carbonic anhydrase 12 isoform 2 precursor [Homo... 377 e-105
Alignment gi|NP_036245.1| carbonic anhydrase 14 precursor [Homo sapiens]. 201 1e-51
Alignment gi|NP_001206.2| carbonic anhydrase 6 precursor [Homo sapiens]. 156 3e-38
Alignment gi|NP_001207.2| carbonic anhydrase 9 precursor [Homo sapiens]. 144 1e-34
Alignment gi|NP_940986.1| carbonic anhydrase 13 [Homo sapiens]. 127 2e-29
Alignment gi|NP_001158302.1| carbonic anhydrase 1 [Homo sapiens]. 124 2e-28
Alignment gi|NP_001122303.1| carbonic anhydrase 1 [Homo sapiens]. 124 2e-28
Alignment gi|NP_001122302.1| carbonic anhydrase 1 [Homo sapiens]. 124 2e-28
Alignment gi|NP_001122301.1| carbonic anhydrase 1 [Homo sapiens]. 124 2e-28
>ref|NP_001209.1| carbonic anhydrase 12 isoform 1 precursor [Homo sapiens].
Length = 354
Score = 390 bits (1003), Expect = e-109
Identities = 198/306 (64%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Frame = +3
Query: 141 MPHRNXXXXXXXXXXXXKEQPSSPAPLNGSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDL 320
MP R+ KEQPSSPAP+NGSKWTY GP+GE SWSK YPSCGGLLQSPIDL
Sbjct: 1 MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYPSCGGLLQSPIDL 60
Query: 321 HGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSVKLKLFEDMHIQGLGHRYNASQLHL 500
H DILQY+ASL PL FQGYN +AN+QF+LTNNGHSVKL L DMHIQGL RY+A+QLHL
Sbjct: 61 HSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQGLQSRYSATQLHL 120
Query: 501 HWGDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFN 680
HWG+ N+PHGSEHT+ G+HFAAELHIV++NSDLYP+AS AS+K EGLAVLAVLIEMGSFN
Sbjct: 121 HWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFN 180
Query: 681 PSYDKIFSHLPDVKYKDQKVHIPGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFR 860
PSYDKIFSHL VKYK Q+ +PGF+I GSLTTPPC+PTVLWTVFR
Sbjct: 181 PSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFR 240
Query: 861 NPVQFHRSSCWLWRQS--CTAHTWMTRPQRDGPQLPGKQKFDERLVYVSFQTVPDSTYAG 1034
NPVQ + + CT H P+ QKFDERLVY SF V T AG
Sbjct: 241 NPVQISQEQLLALETALYCT-HMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAG 299
Query: 1035 LNLGII 1052
L+LGII
Sbjct: 300 LSLGII 305
>ref|NP_996808.1| carbonic anhydrase 12 isoform 2 precursor [Homo sapiens].
Length = 343
Score = 377 bits (969), Expect = e-105
Identities = 189/290 (65%), Positives = 213/290 (73%), Gaps = 2/290 (0%)
Frame = +3
Query: 141 MPHRNXXXXXXXXXXXXKEQPSSPAPLNGSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDL 320
MP R+ KEQPSSPAP+NGSKWTY GP+GE SWSK YPSCGGLLQSPIDL
Sbjct: 1 MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYPSCGGLLQSPIDL 60
Query: 321 HGDILQYNASLVPLAFQGYNETANQQFVLTNNGHSVKLKLFEDMHIQGLGHRYNASQLHL 500
H DILQY+ASL PL FQGYN +AN+QF+LTNNGHSVKL L DMHIQGL RY+A+QLHL
Sbjct: 61 HSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQGLQSRYSATQLHL 120
Query: 501 HWGDQNEPHGSEHTIGGKHFAAELHIVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFN 680
HWG+ N+PHGSEHT+ G+HFAAELHIV++NSDLYP+AS AS+K EGLAVLAVLIEMGSFN
Sbjct: 121 HWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFN 180
Query: 681 PSYDKIFSHLPDVKYKDQKVHIPGFSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFR 860
PSYDKIFSHL VKYK Q+ +PGF+I GSLTTPPC+PTVLWTVFR
Sbjct: 181 PSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFR 240
Query: 861 NPVQFHRSSCWLWRQS--CTAHTWMTRPQRDGPQLPGKQKFDERLVYVSF 1004
NPVQ + + CT H P+ QKFDERLVY SF
Sbjct: 241 NPVQISQEQLLALETALYCT-HMDDPSPREMINNFRQVQKFDERLVYTSF 289
>ref|NP_036245.1| carbonic anhydrase 14 precursor [Homo sapiens].
Length = 337
Score = 201 bits (510), Expect = 1e-51
Identities = 111/279 (39%), Positives = 159/279 (56%), Gaps = 4/279 (1%)
Frame = +3
Query: 225 GSKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFV 404
G WTY GP+G+ W SYP CG QSPID+ D + ++ L L GY++ +
Sbjct: 19 GQHWTYEGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLD 78
Query: 405 LTNNGHSVKLKLFEDMHIQGLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
L NNGH+V+L L +++ GL +Y A+QLHLHWG + P GSEH I + AELHIV+
Sbjct: 79 LHNNGHTVQLSLPSTLYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVH 138
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
++SD Y + S A+++P+GLAVL +LIE+G + N +Y+ I SHL +V++KDQK +P F++
Sbjct: 139 YDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNL 198
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAHTWMTRPQ 941
GSLTTPPC+ +VLWTVF Q L + T + P
Sbjct: 199 RELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQ--LEKLQGTLFSTEEEPS 256
Query: 942 RDGPQ-LPGKQKFDERLVYVSFQTVPDSTYAG--LNLGI 1049
+ Q Q ++R+V+ SF S G L+LG+
Sbjct: 257 KLLVQNYRALQPLNQRMVFASFIQAGSSYTTGEMLSLGV 295
>ref|NP_001206.2| carbonic anhydrase 6 precursor [Homo sapiens].
Length = 308
Score = 156 bits (394), Expect = 3e-38
Identities = 92/236 (38%), Positives = 123/236 (52%), Gaps = 5/236 (2%)
Frame = +3
Query: 228 SKWTYL-GPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFV 404
S WTY G E W + YP+CGG QSPI+L ++YN SL L GY ET +F
Sbjct: 21 SDWTYSEGALDEAHWPQHYPACGGQRQSPINLQRTKVRYNPSLKGLNMTGY-ETQAGEFP 79
Query: 405 LTNNGHSVKLKLFEDMHIQGL-GHRYNASQLHLHWGD-QNEPHGSEHTIGGKHFAAELHI 578
+ NNGH+V++ L M + G Y A Q+H HWG +E GSEHT+ G E+HI
Sbjct: 80 MVNNGHTVQISLPSTMRMTVADGTVYIAQQMHFHWGGASSEISGSEHTVDGIRHVIEIHI 139
Query: 579 VYFNSDLYPNASIASDKPEGLAVLAVLIEMGSF--NPSYDKIFSHLPDVKYKDQKVHIPG 752
V++NS Y + IA D P+GLAVLA +E+ ++ N Y SHL ++KY Q+ + G
Sbjct: 140 VHYNSK-YKSYDIAQDAPDGLAVLAAFVEVKNYPENTYYSNFISHLANIKYPGQRTTLTG 198
Query: 753 FSIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQSCTAH 920
+ GSLTTPPC V W V + V+ R+ W S H
Sbjct: 199 LDVQDMLPRNLQHYYTYHGSLTTPPCTENVHWFVLADFVKLSRTQVWKLENSLLDH 254
>ref|NP_001207.2| carbonic anhydrase 9 precursor [Homo sapiens].
Length = 459
Score = 144 bits (363), Expect = 1e-34
Identities = 85/231 (36%), Positives = 115/231 (49%), Gaps = 7/231 (3%)
Frame = +3
Query: 228 SKWTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVL 407
S W Y G+ W + P+C G QSP+D+ + + +L PL G+ + L
Sbjct: 139 SHWRY---GGDPPWPRVSPACAGRFQSPVDIRPQLAAFCPALRPLELLGFQLPPLPELRL 195
Query: 408 TNNGHSVKLKLFEDMHIQ-GLGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELHIVY 584
NNGHSV+L L + + G G Y A QLHLHWG P GSEHT+ G F AE+H+V+
Sbjct: 196 RNNGHSVQLTLPPGLEMALGPGREYRALQLHLHWGAAGRP-GSEHTVEGHRFPAEIHVVH 254
Query: 585 FNSDLYPNASIASDKPEGLAVLAVLIEMG-SFNPSYDKIFSHLPDVKYKDQKVHIPGFSI 761
S + A +P GLAVLA +E G N +Y+++ S L ++ + + +PG I
Sbjct: 255 L-STAFARVDEALGRPGGLAVLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDI 313
Query: 762 XXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV-----QFHRSSCWLW 899
GSLTTPPC V+WTVF V Q H S LW
Sbjct: 314 SALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVMLSAKQLHTLSDTLW 364
>ref|NP_940986.1| carbonic anhydrase 13 [Homo sapiens].
Length = 262
Score = 127 bits (319), Expect = 2e-29
Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 7/235 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG W + +P G QSPI++ ++Y++SL PL+ + +A +++N
Sbjct: 6 WGYREHNGPIHWKEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSAK---IISN 62
Query: 414 NGHSVKLKLFEDMHIQG------LGHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
+GHS + F+D + L Y Q+HLHWG ++ HGSEH + G +AAELH
Sbjct: 63 SGHSFNVD-FDDTENKSVLRGGPLTGSYRLRQVHLHWGSADD-HGSEHIVDGVSYAAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+V++NSD YP+ A+ +P+GLAVL V +++G N KI L +K K ++ F
Sbjct: 121 VVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIGEPNSQLQKITDTLDSIKEKGKQTRFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPVQFHRSSCWLWRQ-SCTA 917
+ GSLT PP +V W V + P+ +R CTA
Sbjct: 181 DL-LSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTA 234
>ref|NP_001158302.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 124 bits (310), Expect = 2e-28
Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG + WSK YP G QSP+D+ +++ SL P++ YN ++ + N
Sbjct: 6 WGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVS-YNPATAKEII--N 62
Query: 414 NGHSVKLKLFEDMHIQGL------GHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + FED + + Y Q H HWG NE HGSEHT+ G ++AELH
Sbjct: 63 VGHSFHVN-FEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNE-HGSEHTVDGVKYSAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+ ++NS Y + + A+ K +GLAV+ VL+++G NP K+ L +K K ++ F
Sbjct: 121 VAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP + +V W + + +
Sbjct: 181 D-PSTLLPSSLDFWTYPGSLTHPPLYESVTWIICKESI 217
>ref|NP_001122303.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 124 bits (310), Expect = 2e-28
Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG + WSK YP G QSP+D+ +++ SL P++ YN ++ + N
Sbjct: 6 WGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVS-YNPATAKEII--N 62
Query: 414 NGHSVKLKLFEDMHIQGL------GHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + FED + + Y Q H HWG NE HGSEHT+ G ++AELH
Sbjct: 63 VGHSFHVN-FEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNE-HGSEHTVDGVKYSAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+ ++NS Y + + A+ K +GLAV+ VL+++G NP K+ L +K K ++ F
Sbjct: 121 VAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP + +V W + + +
Sbjct: 181 D-PSTLLPSSLDFWTYPGSLTHPPLYESVTWIICKESI 217
>ref|NP_001122302.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 124 bits (310), Expect = 2e-28
Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG + WSK YP G QSP+D+ +++ SL P++ YN ++ + N
Sbjct: 6 WGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVS-YNPATAKEII--N 62
Query: 414 NGHSVKLKLFEDMHIQGL------GHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + FED + + Y Q H HWG NE HGSEHT+ G ++AELH
Sbjct: 63 VGHSFHVN-FEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNE-HGSEHTVDGVKYSAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+ ++NS Y + + A+ K +GLAV+ VL+++G NP K+ L +K K ++ F
Sbjct: 121 VAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP + +V W + + +
Sbjct: 181 D-PSTLLPSSLDFWTYPGSLTHPPLYESVTWIICKESI 217
>ref|NP_001122301.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 124 bits (310), Expect = 2e-28
Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 6/218 (2%)
Frame = +3
Query: 234 WTYLGPNGEKSWSKSYPSCGGLLQSPIDLHGDILQYNASLVPLAFQGYNETANQQFVLTN 413
W Y NG + WSK YP G QSP+D+ +++ SL P++ YN ++ + N
Sbjct: 6 WGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVS-YNPATAKEII--N 62
Query: 414 NGHSVKLKLFEDMHIQGL------GHRYNASQLHLHWGDQNEPHGSEHTIGGKHFAAELH 575
GHS + FED + + Y Q H HWG NE HGSEHT+ G ++AELH
Sbjct: 63 VGHSFHVN-FEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNE-HGSEHTVDGVKYSAELH 120
Query: 576 IVYFNSDLYPNASIASDKPEGLAVLAVLIEMGSFNPSYDKIFSHLPDVKYKDQKVHIPGF 755
+ ++NS Y + + A+ K +GLAV+ VL+++G NP K+ L +K K ++ F
Sbjct: 121 VAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNF 180
Query: 756 SIXXXXXXXXXXXXXXXGSLTTPPCHPTVLWTVFRNPV 869
GSLT PP + +V W + + +
Sbjct: 181 D-PSTLLPSSLDFWTYPGSLTHPPLYESVTWIICKESI 217
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 48,087,000
Number of extensions: 1494300
Number of successful extensions: 5668
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 5568
Number of HSP's successfully gapped: 27
Length of query: 351
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 248
Effective length of database: 14,901,872
Effective search space: 3695664256
Effective search space used: 3695664256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008625
(1054 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr01 442 e-121
>Sscrofa_Chr01
|| Length = 315321322
Score = 442 bits (223), Expect = e-121
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 4 acagacgtgctctgcagggcgcccgggccgtgcgcacgaggttcccgtgcgagccccgcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119822391 acagacgtgctctgcagggcgcccgggccgtgcgcacgaggttcccgtgcgagccccgcc 119822450
Query: 64 gaccccagagcccgagacggagagtgaggagcccagccgccggcagcccgcgtctggccc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119822451 gaccccagagcccgagacggagagtgaggagcccagccgccggcagcccgcgtctggccc 119822510
Query: 124 cgagaagccgcctgaagatgccccaccgcaacctacacgcggctgccgtcctcctgctcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119822511 cgagaagccgcctgaagatgccccaccgcaacctacacgcggctgccgtcctcctgctcc 119822570
Query: 184 tggtcttaaaggaacagccttccagcccagccccactcaacgg 226
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119822571 tggtcttaaaggaacagccttccagcccagccccactcaacgg 119822613
Score = 359 bits (181), Expect = 2e-96
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 246 ggtcccaatggggagaagagctggtccaagagctacccatcatgtgggggcctgctacag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119861130 ggtcccaatggggagaagagctggtccaagagctacccatcatgtgggggcctgctacag 119861189
Query: 306 tccccaatagacctgcatggtgacatcctccagtacaacgccagccttgtaccccttgcc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119861190 tccccaatagacctgcatggtgacatcctccagtacaacgccagccttgtaccccttgcc 119861249
Query: 366 ttccaaggctacaatgagactgccaaccagcagtttgtcctgaccaacaacggccattca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119861250 ttccaaggctacaatgagactgccaaccagcagtttgtcctgaccaacaacggccattca 119861309
Query: 426 g 426
|
Sbjct: 119861310 g 119861310
Score = 301 bits (152), Expect = 4e-79
Identities = 159/160 (99%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 728 agaccaaaaagtgcacatcccgggtttcagcattgaagagctgctgccagagaggcctga 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119867504 agaccaaaaagtgcacatcccgggtttcagcattgaagagctgctgccagagaggcctga 119867563
Query: 788 agagtactaccgctacagggggtccctgaccacacctccttgccaccccactgtgctctg 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119867564 agagtactaccgctacagggggtccctgaccacacctccttgccaccccactgtgctctg 119867623
Query: 848 gacggtgttccggaaccctgtgc-aatttcacaggagcag 886
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 119867624 gacggtgttccggaaccctgtgcaaatttcacaggagcag 119867663
Score = 289 bits (146), Expect = 2e-75
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 424 cagtgaagctgaaactgttcgaggacatgcacatccagggcctggggcaccgctacaatg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119862226 cagtgaagctgaaactgttcgaggacatgcacatccagggcctggggcaccgctacaatg 119862285
Query: 484 cctcacagctgcaccttcactggggggaccagaatgaaccccacggctccgagcacacta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119862286 cctcacagctgcaccttcactggggggaccagaatgaaccccacggctccgagcacacta 119862345
Query: 544 tcggtgggaagcactttgccgctgag 569
||||||||||||||||||||||||||
Sbjct: 119862346 tcggtgggaagcactttgccgctgag 119862371
Score = 194 bits (98), Expect = 7e-47
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 568 agctgcatattgtctattttaactcggacctgtaccccaatgccagcatcgccagtgaca 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119866303 agctgcatattgtctattttaactcggacctgtaccccaatgccagcatcgccagtgaca 119866362
Query: 628 agccagaaggcctcgctgtcctagctgttctcatagag 665
||||||||||||||||||||||||||||||||||||||
Sbjct: 119866363 agccagaaggcctcgctgtcctagctgttctcatagag 119866400
Score = 178 bits (90), Expect = 4e-42
Identities = 119/125 (95%), Gaps = 4/125 (3%)
Strand = Plus / Plus
Query: 883 gcagctgctggctttggagacagtcctgtactgcacacacatggatgacccgt-ccccag 941
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 119869170 gcagctgctggctttggagacagtcctgtactgcacacacatggatgacccgtcccccag 119869229
Query: 942 agagatggtccacaacttccnggcaag--caaaagtttgacgagaggctggtgtatgtct 999
|||||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||
Sbjct: 119869230 agagatggtcaacaacttcc-ggcaggtccaaaagtttgacgagaggctggtgtatgtct 119869288
Query: 1000 ccttc 1004
|||||
Sbjct: 119869289 ccttc 119869293
Score = 131 bits (66), Expect = 8e-28
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 664 agatgggctctttcaatccatcatatgacaagatcttcagtcacctcccagatgtaaagt 723
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Sbjct: 119867211 agatgggctctttcaatccatcatatgacaagatcttcagtcacctcccagatgtaaagt 119867270
Query: 724 acaaag 729
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Sbjct: 119867271 acaaag 119867276
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,255,771
Number of extensions: 142
Number of successful extensions: 142
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 140
Number of HSP's successfully gapped: 7
Length of query: 1054
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1033
Effective length of database: 2,808,413,156
Effective search space: 2901090790148
Effective search space used: 2901090790148
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)