Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008674
(1282 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776769.1| heat shock-related 70 kDa protein 2 [Bos taurus]. 686 0.0
Alignment gi|NP_776770.2| heat shock cognate 71 kDa protein [Bos taurus]. 642 0.0
Alignment gi|NP_976067.2| heat shock 70 kDa protein 1B [Bos taurus]. 617 e-177
Alignment gi|NP_776975.1| heat shock 70 kDa protein 1A [Bos taurus]. 615 e-176
Alignment gi|NP_001161367.1| heat shock 70 kDa protein 1-like [Bos taurus]. 615 e-176
Alignment gi|XP_002685896.1| PREDICTED: heat shock protein 70-like [Bos t... 593 e-169
Alignment gi|XP_589747.1| PREDICTED: heat shock protein 70-like [Bos taur... 593 e-169
Alignment gi|NP_001068616.1| 78 kDa glucose-regulated protein precursor [... 483 e-136
Alignment gi|NP_001029696.1| stress-70 protein, mitochondrial precursor [... 349 3e-96
Alignment gi|NP_001039853.1| heat shock 70 kDa protein 14 [Bos taurus]. 259 4e-69
>ref|NP_776769.1| heat shock-related 70 kDa protein 2 [Bos taurus].
Length = 631
Score = 686 bits (1769), Expect = 0.0
Identities = 353/368 (95%), Positives = 354/368 (96%)
Frame = +3
Query: 165 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 344
MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIG AAKNQV
Sbjct: 1 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGTAAKNQV 60
Query: 345 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 524
AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI
Sbjct: 61 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 120
Query: 525 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 704
SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA
Sbjct: 121 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 180
Query: 705 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 884
AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM
Sbjct: 181 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240
Query: 885 VSHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 1064
VSH AEEFKRKHKKDI P RLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI
Sbjct: 241 VSHWAEEFKRKHKKDIAPA-----RLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 295
Query: 1065 TRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCK 1244
TRARFEELNADLFR LEPVEKALRDA LDKGQIQEIVLVGGSTRIPKIQKLL DFFN K
Sbjct: 296 TRARFEELNADLFRVPLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 355
Query: 1245 ELNKTINP 1268
ELNK+INP
Sbjct: 356 ELNKSINP 363
>ref|NP_776770.2| heat shock cognate 71 kDa protein [Bos taurus].
Length = 650
Score = 642 bits (1656), Expect = 0.0
Identities = 322/366 (87%), Positives = 342/366 (93%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAA I
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAATI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_976067.2| heat shock 70 kDa protein 1B [Bos taurus].
Length = 641
Score = 617 bits (1591), Expect = e-177
Identities = 310/366 (84%), Positives = 334/366 (91%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+ AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+
Sbjct: 2 AKNMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF D VQSDMKHWPFRV+++G KPKVQV YKGE K F+PEEISS
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFRVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
YGLD+ G GE+NVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+
Sbjct: 182 TYGLDRTG--KGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EG+DFYTSITR
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL +DLFR TLEPVEKALRDA LDK QI ++VLVGGSTRIPK+QKLL DFFN ++L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_776975.1| heat shock 70 kDa protein 1A [Bos taurus].
Length = 641
Score = 615 bits (1587), Expect = e-176
Identities = 310/366 (84%), Positives = 334/366 (91%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+ AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+
Sbjct: 2 AKNMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF D VQSDMK WPFRV+++G KPKVQV YKGE K F+PEEISS
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKEWPFRVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLD+ G GE+NVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+
Sbjct: 182 AYGLDRTG--KGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EG+DFYTSITR
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL +DLFR TLEPVEKALRDA LDK QI ++VLVGGSTRIPK+QKLL DFFN ++L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_001161367.1| heat shock 70 kDa protein 1-like [Bos taurus].
Length = 641
Score = 615 bits (1586), Expect = e-176
Identities = 309/367 (84%), Positives = 336/367 (91%)
Frame = +3
Query: 168 SARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 347
+A+G AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 3 AAKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 62
Query: 348 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEIS 527
MNP NT+FDAKRLIGRKF D VQSDMK WPF+V++EGGKPKV V YKGE K F+PEEIS
Sbjct: 63 MNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYKGEKKAFYPEEIS 122
Query: 528 SMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAA 707
SMVLTKMKE AEA+LG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAA
Sbjct: 123 SMVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 182
Query: 708 IAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 887
IAYGLDK G GE++VLIFDLGGGTFDVS+LTI+DGIFEVK+TAGDTHLGGEDFDNR+V
Sbjct: 183 IAYGLDKAG--QGERHVLIFDLGGGTFDVSVLTIDDGIFEVKATAGDTHLGGEDFDNRLV 240
Query: 888 SHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSIT 1067
SH EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQA++EIDSLYEG+DFYTSIT
Sbjct: 241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSIT 300
Query: 1068 RARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKE 1247
RARFEEL ADLFRGTLEPVEKALRDA +DK +I +IVLVGGSTRIPK+Q+LL D+FN ++
Sbjct: 301 RARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRD 360
Query: 1248 LNKTINP 1268
LNK+INP
Sbjct: 361 LNKSINP 367
>ref|XP_002685896.1| PREDICTED: heat shock protein 70-like [Bos taurus].
Length = 643
Score = 593 bits (1528), Expect = e-169
Identities = 296/367 (80%), Positives = 332/367 (90%)
Frame = +3
Query: 168 SARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 347
+AR AIGIDLGTTYSCVGVFQHG+VEI+ANDQGNRTTPSYVAF+DTERL+GDAAK+Q A
Sbjct: 3 AARELAIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFSDTERLVGDAAKSQAA 62
Query: 348 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEIS 527
+NP NT+FD KRLIGR+F D +VQSDMKHWPF+VVSEGGKPKV+V Y+GE K F+PEEIS
Sbjct: 63 LNPHNTVFDVKRLIGRRFTDPSVQSDMKHWPFQVVSEGGKPKVRVSYRGEDKAFYPEEIS 122
Query: 528 SMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAA 707
SMVL+KMKE AEAYLG V+ AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAA
Sbjct: 123 SMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAA 182
Query: 708 IAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 887
IAYGLD+ G GE+NVLIFDLGGGTFDVS+LTI+ G+FEVK+TAGDTHLGGEDFDNR+V
Sbjct: 183 IAYGLDRLG--AGERNVLIFDLGGGTFDVSVLTIDAGVFEVKATAGDTHLGGEDFDNRLV 240
Query: 888 SHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSIT 1067
+H EEF+RKH KD+ KRA+RRLRTACERAKRTLSSSTQA++EIDSL+EGVDFYTSIT
Sbjct: 241 NHFMEEFRRKHGKDLSRNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT 300
Query: 1068 RARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKE 1247
RARFEEL +DLFR TLEPVEKALRDA L K QI +IVLVGGSTRIPK+QKLL DFF+ +E
Sbjct: 301 RARFEELCSDLFRSTLEPVEKALRDAKLGKAQIHDIVLVGGSTRIPKVQKLLQDFFDGRE 360
Query: 1248 LNKTINP 1268
LNK+INP
Sbjct: 361 LNKSINP 367
>ref|XP_589747.1| PREDICTED: heat shock protein 70-like [Bos taurus].
Length = 643
Score = 593 bits (1528), Expect = e-169
Identities = 296/367 (80%), Positives = 332/367 (90%)
Frame = +3
Query: 168 SARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 347
+AR AIGIDLGTTYSCVGVFQHG+VEI+ANDQGNRTTPSYVAF+DTERL+GDAAK+Q A
Sbjct: 3 AARELAIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFSDTERLVGDAAKSQAA 62
Query: 348 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEIS 527
+NP NT+FD KRLIGR+F D +VQSDMKHWPF+VVSEGGKPKV+V Y+GE K F+PEEIS
Sbjct: 63 LNPHNTVFDVKRLIGRRFTDPSVQSDMKHWPFQVVSEGGKPKVRVSYRGEDKAFYPEEIS 122
Query: 528 SMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAA 707
SMVL+KMKE AEAYLG V+ AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAA
Sbjct: 123 SMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAA 182
Query: 708 IAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 887
IAYGLD+ G GE+NVLIFDLGGGTFDVS+LTI+ G+FEVK+TAGDTHLGGEDFDNR+V
Sbjct: 183 IAYGLDRLG--AGERNVLIFDLGGGTFDVSVLTIDAGVFEVKATAGDTHLGGEDFDNRLV 240
Query: 888 SHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSIT 1067
+H EEF+RKH KD+ KRA+RRLRTACERAKRTLSSSTQA++EIDSL+EGVDFYTSIT
Sbjct: 241 NHFMEEFRRKHGKDLSRNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT 300
Query: 1068 RARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKE 1247
RARFEEL +DLFR TLEPVEKALRDA L K QI +IVLVGGSTRIPK+QKLL DFF+ +E
Sbjct: 301 RARFEELCSDLFRSTLEPVEKALRDAKLGKAQIHDIVLVGGSTRIPKVQKLLQDFFDGRE 360
Query: 1248 LNKTINP 1268
LNK+INP
Sbjct: 361 LNKSINP 367
>ref|NP_001068616.1| 78 kDa glucose-regulated protein precursor [Bos taurus].
Length = 655
Score = 483 bits (1244), Expect = e-136
Identities = 248/366 (67%), Positives = 297/366 (81%), Gaps = 2/366 (0%)
Frame = +3
Query: 177 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 353
G +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 29 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 88
Query: 354 PTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKG-EIKTFFPEEISS 530
P NT+FDAKRLIGR + D +VQ D+K PF+VV + KP +QV+ G + KTF PEEIS+
Sbjct: 89 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDVGGGQTKTFAPEEISA 148
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKE AEAYLG KV AV+TVPAYFND+QRQATKDAGTI GLNV+RIINEPTAAAI
Sbjct: 149 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 208
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK+ GEKN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++
Sbjct: 209 AYGLDKRE---GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVME 265
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H + +K+K KD+ RAV++LR E+AKR LSS QA IEI+S YEG DF ++TR
Sbjct: 266 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTR 325
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
A+FEELN DLFR T++PV+K L D+ L K I EIVLVGGSTRIPKIQ+L+ +FFN KE
Sbjct: 326 AKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEP 385
Query: 1251 NKTINP 1268
++ INP
Sbjct: 386 SRGINP 391
>ref|NP_001029696.1| stress-70 protein, mitochondrial precursor [Bos taurus].
Length = 679
Score = 349 bits (895), Expect = 3e-96
Identities = 189/370 (51%), Positives = 249/370 (67%), Gaps = 5/370 (1%)
Frame = +3
Query: 174 RGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 350
+G +GIDLGTT SCV V + + +++ N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 52 KGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVT 111
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT + KRLIGR+++D VQ D+K+ PF++V VE G K + P +I +
Sbjct: 112 NPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIV-RASNGDAWVEAHG--KLYSPSQIGA 168
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
VL KMKE AE YLG ++AVITVPAYFNDSQRQATKDAG I+GLNVLR+INEPTAAA+
Sbjct: 169 FVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAAL 228
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK +K + ++DLGGGTFD+SIL I+ G+FEVKST GDT LGGEDFD ++
Sbjct: 229 AYGLDK----SEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLR 284
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVD----FYT 1058
H+ +EFKR+ D+ A++R+R A E+AK LSSS Q I + L
Sbjct: 285 HIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNM 344
Query: 1059 SITRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFN 1238
+TRA+FE + DL R T+ P +KA++DA + K I E++LVGG TR+PK+Q+ + D F
Sbjct: 345 KLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFG 404
Query: 1239 CKELNKTINP 1268
+ +K +NP
Sbjct: 405 -RAPSKAVNP 413
>ref|NP_001039853.1| heat shock 70 kDa protein 14 [Bos taurus].
Length = 509
Score = 259 bits (662), Expect = 4e-69
Identities = 132/362 (36%), Positives = 215/362 (59%)
Frame = +3
Query: 183 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 362
AIG+ LG T +CV V++ G+ +++AND G+R TP+ VA++ E ++G AAK N +N
Sbjct: 3 AIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAIVAYSKNEEVVGLAAKQSRIRNISN 62
Query: 363 TIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISSMVLT 542
T+ K+++GR +D + + V+ + GK +++ E K PE+++ ++ +
Sbjct: 63 TVMKVKQILGRSSDDPQSRKYITESKCLVIEKNGKLLYEIDTGEEKKFVSPEDVARLIFS 122
Query: 543 KMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 722
KMKE A + LG VITVP F + Q+ A +A G NVLR+I+EP+AA +AYG+
Sbjct: 123 KMKETAHSVLGSDANDVVITVPFDFGEKQKSALGEAARAAGFNVLRLIHEPSAALLAYGI 182
Query: 723 DKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAE 902
+ G+ N+L+F LGG + +S++ + GI+ V ST D ++GG F + +LA
Sbjct: 183 GQDS-PTGKSNILVFKLGGTSLSISVMEVNSGIYRVLSTNTDNNIGGTHFTETLAQYLAS 241
Query: 903 EFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFE 1082
EF+R + D+ RA+ +L + AK +LS+ A+ +DSLYEG DF +++RARFE
Sbjct: 242 EFQRSFRHDVRGNARAMMKLMNGADTAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFE 301
Query: 1083 ELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKELNKTI 1262
L + LF +E + + L + I ++VL GGS+RIP++Q+++ D F EL +I
Sbjct: 302 LLCSPLFNKCIEAIREVLEQSGFTADDINKVVLCGGSSRIPRLQQMIRDLFPAVELLNSI 361
Query: 1263 NP 1268
P
Sbjct: 362 PP 363
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,392,422
Number of extensions: 1024790
Number of successful extensions: 4065
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 4018
Number of HSP's successfully gapped: 19
Length of query: 427
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 322
Effective length of database: 14,207,134
Effective search space: 4574697148
Effective search space used: 4574697148
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008674
(1282 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537479.1| PREDICTED: similar to heat shock protein 2 isof... 712 0.0
Alignment gi|XP_866274.1| PREDICTED: similar to heat shock protein 2 isof... 669 0.0
Alignment gi|XP_536543.1| PREDICTED: similar to Heat shock cognate 71 kDa... 644 0.0
Alignment gi|XP_859437.1| PREDICTED: similar to heat shock protein 8 isof... 644 0.0
Alignment gi|XP_859398.1| PREDICTED: similar to heat shock 70kDa protein ... 644 0.0
Alignment gi|XP_855655.1| PREDICTED: similar to heat shock 70kDa protein ... 635 0.0
Alignment gi|NP_001003067.1| heat shock 70 kDa protein 1 [Canis lupus fam... 617 e-177
Alignment gi|XP_532082.1| PREDICTED: similar to heat shock 70kDa protein ... 614 e-176
Alignment gi|XP_859472.1| PREDICTED: similar to Heat shock cognate 71 kDa... 579 e-165
Alignment gi|XP_848246.1| PREDICTED: similar to Heat shock cognate 71 kDa... 573 e-163
>ref|XP_537479.1| PREDICTED: similar to heat shock protein 2 isoform 1 [Canis
familiaris].
Length = 637
Score = 712 bits (1839), Expect = 0.0
Identities = 362/368 (98%), Positives = 364/368 (98%)
Frame = +3
Query: 165 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 344
MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 1 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 60
Query: 345 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 524
AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGE+KTFFPEEI
Sbjct: 61 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEI 120
Query: 525 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 704
SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA
Sbjct: 121 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 180
Query: 705 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 884
AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM
Sbjct: 181 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240
Query: 885 VSHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 1064
VSHLAEEFKRKHKKDIGP KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI
Sbjct: 241 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 300
Query: 1065 TRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCK 1244
TRARFEELNADLFRGTLEPVEKALRDA LDKGQIQEIVLVGGSTRIPKIQKLL DFFN K
Sbjct: 301 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 360
Query: 1245 ELNKTINP 1268
ELNK+INP
Sbjct: 361 ELNKSINP 368
>ref|XP_866274.1| PREDICTED: similar to heat shock protein 2 isoform 2 [Canis
familiaris].
Length = 620
Score = 669 bits (1727), Expect = 0.0
Identities = 345/368 (93%), Positives = 347/368 (94%)
Frame = +3
Query: 165 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 344
MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVA
Sbjct: 1 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVA---------------- 44
Query: 345 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 524
MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGE+KTFFPEEI
Sbjct: 45 -MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEI 103
Query: 525 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 704
SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA
Sbjct: 104 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 163
Query: 705 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 884
AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM
Sbjct: 164 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 223
Query: 885 VSHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 1064
VSHLAEEFKRKHKKDIGP KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI
Sbjct: 224 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 283
Query: 1065 TRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCK 1244
TRARFEELNADLFRGTLEPVEKALRDA LDKGQIQEIVLVGGSTRIPKIQKLL DFFN K
Sbjct: 284 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 343
Query: 1245 ELNKTINP 1268
ELNK+INP
Sbjct: 344 ELNKSINP 351
>ref|XP_536543.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 1 [Canis familiaris].
Length = 646
Score = 644 bits (1660), Expect = 0.0
Identities = 323/366 (88%), Positives = 343/366 (93%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|XP_859437.1| PREDICTED: similar to heat shock protein 8 isoform 3 [Canis
familiaris].
Length = 586
Score = 644 bits (1660), Expect = 0.0
Identities = 323/366 (88%), Positives = 343/366 (93%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|XP_859398.1| PREDICTED: similar to heat shock 70kDa protein 8 isoform 2 isoform 2
[Canis familiaris].
Length = 493
Score = 644 bits (1660), Expect = 0.0
Identities = 323/366 (88%), Positives = 343/366 (93%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|XP_855655.1| PREDICTED: similar to heat shock 70kDa protein 8 isoform 2 isoform 2
[Canis familiaris].
Length = 493
Score = 635 bits (1638), Expect = 0.0
Identities = 320/366 (87%), Positives = 340/366 (92%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQH KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHRKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGG FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGIFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVR LRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRCLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_001003067.1| heat shock 70 kDa protein 1 [Canis lupus familiaris].
Length = 640
Score = 617 bits (1592), Expect = e-177
Identities = 311/366 (84%), Positives = 335/366 (91%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+ AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+
Sbjct: 2 AKSAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF D VQSDMKHWPF+VV++G KPKVQV YKGE K F+PEEISS
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVVNDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLD+ G GE+NVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+
Sbjct: 182 AYGLDRTG--KGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EG+DFYTSITR
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL +DLFR TLEPVEKALRDA LDK QI ++VLVGGSTRIPK+QKLL DFFN ++L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|XP_532082.1| PREDICTED: similar to heat shock 70kDa protein 1-like isoform 1
[Canis familiaris].
Length = 641
Score = 614 bits (1583), Expect = e-176
Identities = 310/366 (84%), Positives = 335/366 (91%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+G AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 4 AKGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 63
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF D VQSDMK WPF+V++EGGKPKV V YKGE K F+PEEISS
Sbjct: 64 NPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYKGEKKAFYPEEISS 123
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKE AEA+LG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 124 MVLTKMKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 183
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK G GE++VLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VS
Sbjct: 184 AYGLDKTG--QGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVS 241
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQA++EIDSLYEG+DFYTSITR
Sbjct: 242 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITR 301
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL ADLFRGTLEPVEKALRDA +DK +I +IVLVGGSTRIPK+Q+LL D+FN ++L
Sbjct: 302 ARFEELCADLFRGTLEPVEKALRDAKMDKVKIHDIVLVGGSTRIPKVQRLLQDYFNGRDL 361
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 362 NKSINP 367
>ref|XP_859472.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 4 [Canis familiaris].
Length = 616
Score = 579 bits (1492), Expect = e-165
Identities = 296/366 (80%), Positives = 315/366 (86%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AY DGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AY--------------------------------DGIFEVKSTAGDTHLGGEDFDNRMVN 209
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 210 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 269
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 270 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 329
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 330 NKSINP 335
>ref|XP_848246.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 1 [Canis familiaris].
Length = 616
Score = 573 bits (1476), Expect = e-163
Identities = 294/366 (80%), Positives = 313/366 (85%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQH KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHRKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AY DGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AY--------------------------------DGIFEVKSTAGDTHLGGEDFDNRMVN 209
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVR LRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 210 HFIAEFKRKHKKDISENKRAVRCLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 269
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 270 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 329
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 330 NKSINP 335
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 43,431,842
Number of extensions: 1074247
Number of successful extensions: 4431
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 4311
Number of HSP's successfully gapped: 63
Length of query: 427
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 321
Effective length of database: 15,340,888
Effective search space: 4924425048
Effective search space used: 4924425048
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008674
(1282 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003356782.1| PREDICTED: heat shock-related 70 kDa protein... 714 0.0
Alignment gi|NP_001230836.1| heat shock 70kDa protein 8 [Sus scrofa]. 643 0.0
Alignment gi|NP_998931.1| heat shock 70 kDa protein 1B [Sus scrofa]. 618 e-177
Alignment gi|NP_001116600.1| heat shock 70 kDa protein 1-like [Sus scrofa]. 615 e-176
Alignment gi|NP_001116599.1| heat shock 70 kDa protein [Sus scrofa]. 606 e-174
Alignment gi|XP_001927830.2| PREDICTED: 78 kDa glucose-regulated protein ... 483 e-137
Alignment gi|XP_003124024.1| PREDICTED: stress-70 protein, mitochondrial ... 345 2e-95
Alignment gi|XP_003130009.2| PREDICTED: heat shock cognate 71 kDa protein... 312 3e-85
Alignment gi|NP_001230322.1| heat shock 70 kDa protein 14 [Sus scrofa]. 265 3e-71
Alignment gi|XP_001924955.1| PREDICTED: heat shock 70 kDa protein 13 [Sus... 252 3e-67
>ref|XP_003356782.1| PREDICTED: heat shock-related 70 kDa protein 2-like [Sus scrofa].
Length = 636
Score = 714 bits (1842), Expect = 0.0
Identities = 363/368 (98%), Positives = 364/368 (98%)
Frame = +3
Query: 165 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 344
MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 1 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 60
Query: 345 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 524
AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI
Sbjct: 61 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 120
Query: 525 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 704
SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA
Sbjct: 121 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 180
Query: 705 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 884
AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM
Sbjct: 181 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240
Query: 885 VSHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 1064
VSHLAEEFKRKHKKDIGP KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI
Sbjct: 241 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 300
Query: 1065 TRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCK 1244
TRARFEELNADLFRGTLEPVEKALRDA LDKGQIQEIVLVGGSTRIPKIQKLL DFFN K
Sbjct: 301 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 360
Query: 1245 ELNKTINP 1268
ELNK+INP
Sbjct: 361 ELNKSINP 368
>ref|NP_001230836.1| heat shock 70kDa protein 8 [Sus scrofa].
Length = 646
Score = 643 bits (1658), Expect = 0.0
Identities = 323/366 (88%), Positives = 343/366 (93%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_998931.1| heat shock 70 kDa protein 1B [Sus scrofa].
Length = 641
Score = 618 bits (1593), Expect = e-177
Identities = 310/366 (84%), Positives = 335/366 (91%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+ AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+
Sbjct: 2 AKSVAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF D VQ+DMKHWPFRV+++G KPKVQV YKGE K F+PEEISS
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQADMKHWPFRVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGHPVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLD+ G GE+NVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+
Sbjct: 182 AYGLDRTG--KGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EG+DFYTSITR
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL +DLFR TLEPVEKALRDA LDK QI ++VLVGGSTRIPK+QKLL DFFN ++L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_001116600.1| heat shock 70 kDa protein 1-like [Sus scrofa].
Length = 641
Score = 615 bits (1587), Expect = e-176
Identities = 310/367 (84%), Positives = 336/367 (91%)
Frame = +3
Query: 168 SARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 347
+A+G AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 3 AAKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 62
Query: 348 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEIS 527
MNP NT+FDAKRLIGRKF D VQSDMK WPF+V++EGGKPKV V YKGE K F+PEEIS
Sbjct: 63 MNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYKGEKKAFYPEEIS 122
Query: 528 SMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAA 707
SMVLTKMKE AEA+LG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAA
Sbjct: 123 SMVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 182
Query: 708 IAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 887
IAYGLDK G GE++VLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V
Sbjct: 183 IAYGLDKAG--QGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLV 240
Query: 888 SHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSIT 1067
SH EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQA++EIDSLYEG+DFYTSIT
Sbjct: 241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSIT 300
Query: 1068 RARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKE 1247
RARFEEL ADLFRGTLEPVEKALRDA +DK +I +IVLVGGSTRIPK+Q+LL D+FN ++
Sbjct: 301 RARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRD 360
Query: 1248 LNKTINP 1268
LNK+INP
Sbjct: 361 LNKSINP 367
>ref|NP_001116599.1| heat shock 70 kDa protein [Sus scrofa].
Length = 643
Score = 606 bits (1563), Expect = e-174
Identities = 302/367 (82%), Positives = 336/367 (91%)
Frame = +3
Query: 168 SARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 347
+AR AIGIDLGTTYSCVGVFQHG+VEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 3 AAREVAIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAA 62
Query: 348 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEIS 527
+NP NT+FDAKRLIGRKF D TVQSD+KHWPF+VVSEGGKPKV+V Y+GE K F+PEEIS
Sbjct: 63 LNPQNTVFDAKRLIGRKFADPTVQSDLKHWPFQVVSEGGKPKVRVSYRGEDKAFYPEEIS 122
Query: 528 SMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAA 707
SMVL+KMKE AEAYLG V+ AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAA
Sbjct: 123 SMVLSKMKETAEAYLGQPVRHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAA 182
Query: 708 IAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 887
IAYGLD++G GE+NVLIFDLGGGTFDVS+LTI+ G+FEVK+TAGDTHLGGEDFDNR+V
Sbjct: 183 IAYGLDRRG--AGERNVLIFDLGGGTFDVSVLTIDAGVFEVKATAGDTHLGGEDFDNRLV 240
Query: 888 SHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSIT 1067
+H EEF+RKH+KD+ KRA+RRLRTACERAKRTLSSSTQA++EIDSL+EGVDFYTSIT
Sbjct: 241 NHFMEEFRRKHRKDLSRNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSIT 300
Query: 1068 RARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKE 1247
RARFEEL +DLFR TLEPVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN +E
Sbjct: 301 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRE 360
Query: 1248 LNKTINP 1268
LNK+INP
Sbjct: 361 LNKSINP 367
>ref|XP_001927830.2| PREDICTED: 78 kDa glucose-regulated protein [Sus scrofa].
Length = 675
Score = 483 bits (1244), Expect = e-137
Identities = 248/366 (67%), Positives = 297/366 (81%), Gaps = 2/366 (0%)
Frame = +3
Query: 177 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 353
G +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 28 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 87
Query: 354 PTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKG-EIKTFFPEEISS 530
P NT+FDAKRLIGR + D +VQ D+K PF+VV + KP +QV+ G + KTF PEEIS+
Sbjct: 88 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISA 147
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKE AEAYLG KV AV+TVPAYFND+QRQATKDAGTI GLNV+RIINEPTAAAI
Sbjct: 148 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 207
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK+ GEKN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++
Sbjct: 208 AYGLDKRE---GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVME 264
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H + +K+K KD+ RAV++LR E+AKR LSS QA IEI+S YEG DF ++TR
Sbjct: 265 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTR 324
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
A+FEELN DLFR T++PV+K L D+ L K I EIVLVGGSTRIPKIQ+L+ +FFN KE
Sbjct: 325 AKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEP 384
Query: 1251 NKTINP 1268
++ INP
Sbjct: 385 SRGINP 390
>ref|XP_003124024.1| PREDICTED: stress-70 protein, mitochondrial [Sus scrofa].
Length = 679
Score = 345 bits (886), Expect = 2e-95
Identities = 187/370 (50%), Positives = 249/370 (67%), Gaps = 5/370 (1%)
Frame = +3
Query: 174 RGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 350
+G +GIDLGTT SCV V + + +++ N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 52 KGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVT 111
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT + KRLIGR+++D VQ D+K+ PF++V VE G K + P +I +
Sbjct: 112 NPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIV-RASNGDAWVEAHG--KLYSPSQIGA 168
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
VL KMKE AE YLG ++AVITVPAYFNDSQRQATKDAG I+GLNVLR+INEPTAAA+
Sbjct: 169 FVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAAL 228
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK +K + ++DLGGGTFD+SIL I+ G+FEVKST GDT LGGEDFD ++
Sbjct: 229 AYGLDK----SEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLR 284
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVD----FYT 1058
++ +EFKR+ D+ A++R+R A E+AK LSSS Q I + L
Sbjct: 285 YIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNM 344
Query: 1059 SITRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFN 1238
+TRA+FE + DL + T+ P +KA++DA + K I E++LVGG TR+PK+Q+ + D F
Sbjct: 345 KLTRAQFEGIVTDLIKRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFG 404
Query: 1239 CKELNKTINP 1268
+ +K +NP
Sbjct: 405 -RAPSKAVNP 413
>ref|XP_003130009.2| PREDICTED: heat shock cognate 71 kDa protein-like [Sus scrofa].
Length = 599
Score = 312 bits (799), Expect = 3e-85
Identities = 158/176 (89%), Positives = 164/176 (93%)
Frame = +3
Query: 741 GGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKH 920
G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+H EFKRKH
Sbjct: 143 GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 202
Query: 921 KKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADL 1100
KKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITRARFEELNADL
Sbjct: 203 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 262
Query: 1101 FRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKELNKTINP 1268
FRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KELNK+INP
Sbjct: 263 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINP 318
>ref|NP_001230322.1| heat shock 70 kDa protein 14 [Sus scrofa].
Length = 509
Score = 265 bits (678), Expect = 3e-71
Identities = 134/362 (37%), Positives = 218/362 (60%)
Frame = +3
Query: 183 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 362
AIG+ LG T +CV V++ G+ +++AND G+R TP+ VA+T+ E ++G AAK N +N
Sbjct: 3 AIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAYTENEEVVGLAAKQSRIRNISN 62
Query: 363 TIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISSMVLT 542
T+ K+++GR +D Q + V+ + GK + +++ E+K PE+++ ++ +
Sbjct: 63 TVMKVKQILGRSSDDPQAQKYISESKCLVIEKNGKLRYEIDTGEEMKFVNPEDVARLIFS 122
Query: 543 KMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 722
KMKE A + LG VITVP F + Q+ A +A G NVLR+I+EP+AA +AYG+
Sbjct: 123 KMKETAHSVLGPDANDVVITVPFDFGEKQKNALGEAARAAGFNVLRLIHEPSAALLAYGI 182
Query: 723 DKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAE 902
+ G+ N+L+F LGG + +S++ + GI+ V ST D ++GG F + +LA
Sbjct: 183 GQDS-PTGKSNILVFKLGGTSLSISVMQVNSGIYRVLSTNTDNNIGGTHFTETLAQYLAS 241
Query: 903 EFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFE 1082
EF+R K D+ RA+ +L + + AK +LS+ A+ +DSLYEG DF +++RARFE
Sbjct: 242 EFQRSFKHDVRGNARAMMKLMNSADTAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFE 301
Query: 1083 ELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKELNKTI 1262
L + LF +E + L + I ++VL GGS+RIP++Q+++ + F EL +I
Sbjct: 302 LLCSPLFNKCIEAIRGLLEQSGFTADDINKVVLCGGSSRIPRLQQMIKELFPAVELLNSI 361
Query: 1263 NP 1268
P
Sbjct: 362 PP 363
>ref|XP_001924955.1| PREDICTED: heat shock 70 kDa protein 13 [Sus scrofa].
Length = 471
Score = 252 bits (644), Expect = 3e-67
Identities = 155/406 (38%), Positives = 233/406 (57%), Gaps = 45/406 (11%)
Frame = +3
Query: 186 IGIDLGTTYSCVGVF--QHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 359
IGIDLGTTY VGVF GKV++I ++ G+ + PS V+FTD + +G + NP
Sbjct: 34 IGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVSFTDDDVYVGYESLELADSNPQ 93
Query: 360 NTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISSMVL 539
NTI+DAKR IG+ F +++++ +PF+V+++ G + V E T PE + S +L
Sbjct: 94 NTIYDAKRFIGKIFTPEELEAEIGRYPFKVLNKNGMVEFSVT-SNETITVTPEYVGSRLL 152
Query: 540 TKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYG 719
K+KE+AE YLG V +AVI+VPA F+ QR +T +A + GL +LR+INEPTAAA+AYG
Sbjct: 153 LKLKEMAEEYLGMPVANAVISVPAEFDLKQRNSTIEAANLAGLKILRVINEPTAAAMAYG 212
Query: 720 LDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLA 899
L K +VL+ DLGGGT DVS+L + G+F ++ +G+ LGG+DF+ R++ +L
Sbjct: 213 LHKADVF----HVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQYLY 268
Query: 900 EEFKRKHKKDIGPTKRAVRRLRTACERAKRTLS---------------------SSTQAS 1016
++ + + I K + RLR A E K L+ ST A
Sbjct: 269 KQIYQTY-GFIPSRKEEIHRLRQAVEMVKLNLTLHQTAHMSVLLTVEEKDRREPQSTDAE 327
Query: 1017 IEIDSLYEG----------------------VDFYTSITRARFEELNADLFRGTLEPVEK 1130
+ D L V F T I+R F+ LN DLF+ L P+++
Sbjct: 328 LPKDRLSSADRPHMNRVFGATLSEKKNGESQVLFETEISRKLFDTLNEDLFQKILVPIQQ 387
Query: 1131 ALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKELNKTINP 1268
L++ L+K +I E+VLVGGSTRIP+I++++ +FF K+ N +++P
Sbjct: 388 VLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFFG-KDPNTSVDP 432
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,735,578
Number of extensions: 661791
Number of successful extensions: 2564
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 2532
Number of HSP's successfully gapped: 15
Length of query: 427
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 325
Effective length of database: 8,804,438
Effective search space: 2861442350
Effective search space used: 2861442350
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008674
(1282 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001002012.1| heat shock-related 70 kDa protein 2 [Mus mus... 712 0.0
Alignment gi|NP_032327.2| heat shock-related 70 kDa protein 2 [Mus muscul... 712 0.0
Alignment gi|NP_112442.2| heat shock cognate 71 kDa protein [Mus musculus]. 644 0.0
Alignment gi|NP_034608.2| heat shock 70 kDa protein 1B [Mus musculus]. 622 e-178
Alignment gi|NP_034609.2| heat shock 70 kDa protein 1A [Mus musculus]. 622 e-178
Alignment gi|NP_038586.2| heat shock 70 kDa protein 1-like [Mus musculus]. 609 e-174
Alignment gi|NP_001156906.1| 78 kDa glucose-regulated protein precursor [... 482 e-136
Alignment gi|NP_071705.3| 78 kDa glucose-regulated protein precursor [Mus... 482 e-136
Alignment gi|NP_034611.2| stress-70 protein, mitochondrial [Mus musculus]. 347 1e-95
Alignment gi|NP_056580.2| heat shock 70 kDa protein 14 isoform 1 [Mus mus... 258 9e-69
>ref|NP_001002012.1| heat shock-related 70 kDa protein 2 [Mus musculus].
Length = 633
Score = 712 bits (1839), Expect = 0.0
Identities = 362/368 (98%), Positives = 364/368 (98%)
Frame = +3
Query: 165 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 344
MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 1 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 60
Query: 345 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 524
AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGE+KTFFPEEI
Sbjct: 61 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEI 120
Query: 525 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 704
SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA
Sbjct: 121 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 180
Query: 705 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 884
AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM
Sbjct: 181 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240
Query: 885 VSHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 1064
VSHLAEEFKRKHKKDIGP KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI
Sbjct: 241 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 300
Query: 1065 TRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCK 1244
TRARFEELNADLFRGTLEPVEKALRDA LDKGQIQEIVLVGGSTRIPKIQKLL DFFN K
Sbjct: 301 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 360
Query: 1245 ELNKTINP 1268
ELNK+INP
Sbjct: 361 ELNKSINP 368
>ref|NP_032327.2| heat shock-related 70 kDa protein 2 [Mus musculus].
Length = 633
Score = 712 bits (1839), Expect = 0.0
Identities = 362/368 (98%), Positives = 364/368 (98%)
Frame = +3
Query: 165 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 344
MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 1 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 60
Query: 345 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 524
AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGE+KTFFPEEI
Sbjct: 61 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEI 120
Query: 525 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 704
SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA
Sbjct: 121 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 180
Query: 705 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 884
AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM
Sbjct: 181 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240
Query: 885 VSHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 1064
VSHLAEEFKRKHKKDIGP KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI
Sbjct: 241 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 300
Query: 1065 TRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCK 1244
TRARFEELNADLFRGTLEPVEKALRDA LDKGQIQEIVLVGGSTRIPKIQKLL DFFN K
Sbjct: 301 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 360
Query: 1245 ELNKTINP 1268
ELNK+INP
Sbjct: 361 ELNKSINP 368
>ref|NP_112442.2| heat shock cognate 71 kDa protein [Mus musculus].
Length = 646
Score = 644 bits (1660), Expect = 0.0
Identities = 323/366 (88%), Positives = 343/366 (93%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_034608.2| heat shock 70 kDa protein 1B [Mus musculus].
Length = 642
Score = 622 bits (1605), Expect = e-178
Identities = 313/366 (85%), Positives = 338/366 (92%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+ AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+
Sbjct: 2 AKNTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF DA VQSDMKHWPF+VV++G KPKVQV YKGE ++FFPEEISS
Sbjct: 62 NPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVVNDGDKPKVQVNYKGESRSFFPEEISS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLD+ G GE+NVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VS
Sbjct: 182 AYGLDRTG--KGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVS 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EG+DFYTSITR
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL +DLFRGTLEPVEKALRDA +DK QI ++VLVGGSTRIPK+QKLL DFFN ++L
Sbjct: 300 ARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_034609.2| heat shock 70 kDa protein 1A [Mus musculus].
Length = 641
Score = 622 bits (1605), Expect = e-178
Identities = 313/366 (85%), Positives = 338/366 (92%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+ AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+
Sbjct: 2 AKNTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF DA VQSDMKHWPF+VV++G KPKVQV YKGE ++FFPEEISS
Sbjct: 62 NPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVVNDGDKPKVQVNYKGESRSFFPEEISS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLD+ G GE+NVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VS
Sbjct: 182 AYGLDRTG--KGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVS 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EG+DFYTSITR
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL +DLFRGTLEPVEKALRDA +DK QI ++VLVGGSTRIPK+QKLL DFFN ++L
Sbjct: 300 ARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_038586.2| heat shock 70 kDa protein 1-like [Mus musculus].
Length = 641
Score = 609 bits (1571), Expect = e-174
Identities = 307/365 (84%), Positives = 333/365 (91%)
Frame = +3
Query: 174 RGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 353
+G AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN
Sbjct: 5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 64
Query: 354 PTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISSM 533
P NT+FDAKRLIGRKF D VQSDMK WPF+V++E GKPKV V YKGE K F+PEEISSM
Sbjct: 65 PQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAGKPKVMVSYKGEKKAFYPEEISSM 124
Query: 534 VLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIA 713
VLTKMKE AEA+LG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAIA
Sbjct: 125 VLTKMKETAEAFLGHNVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIA 184
Query: 714 YGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSH 893
YGLDK + GE++VLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VSH
Sbjct: 185 YGLDKG--SHGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSH 242
Query: 894 LAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRA 1073
EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQA++EIDSLYEG+DFYTSITRA
Sbjct: 243 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRA 302
Query: 1074 RFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKELN 1253
RFEEL ADLFRGTLEPVEK+LRDA +DK +I +IVLVGGSTRIPK+QKLL D+FN ++LN
Sbjct: 303 RFEELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLN 362
Query: 1254 KTINP 1268
K+INP
Sbjct: 363 KSINP 367
>ref|NP_001156906.1| 78 kDa glucose-regulated protein precursor [Mus musculus].
Length = 655
Score = 482 bits (1240), Expect = e-136
Identities = 247/366 (67%), Positives = 297/366 (81%), Gaps = 2/366 (0%)
Frame = +3
Query: 177 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 353
G +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 29 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 88
Query: 354 PTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKG-EIKTFFPEEISS 530
P NT+FDAKRLIGR + D +VQ D+K PF+VV + KP +QV+ G + KTF PEEIS+
Sbjct: 89 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISA 148
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKE AEAYLG KV AV+TVPAYFND+QRQATKDAGTI GLNV+RIINEPTAAAI
Sbjct: 149 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 208
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK+ GEKN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++
Sbjct: 209 AYGLDKRE---GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVME 265
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H + +K+K KD+ RAV++LR E+AKR LSS QA IEI+S +EG DF ++TR
Sbjct: 266 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTR 325
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
A+FEELN DLFR T++PV+K L D+ L K I EIVLVGGSTRIPKIQ+L+ +FFN KE
Sbjct: 326 AKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEP 385
Query: 1251 NKTINP 1268
++ INP
Sbjct: 386 SRGINP 391
>ref|NP_071705.3| 78 kDa glucose-regulated protein precursor [Mus musculus].
Length = 655
Score = 482 bits (1240), Expect = e-136
Identities = 247/366 (67%), Positives = 297/366 (81%), Gaps = 2/366 (0%)
Frame = +3
Query: 177 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 353
G +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 29 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 88
Query: 354 PTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKG-EIKTFFPEEISS 530
P NT+FDAKRLIGR + D +VQ D+K PF+VV + KP +QV+ G + KTF PEEIS+
Sbjct: 89 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISA 148
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKE AEAYLG KV AV+TVPAYFND+QRQATKDAGTI GLNV+RIINEPTAAAI
Sbjct: 149 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 208
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK+ GEKN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++
Sbjct: 209 AYGLDKRE---GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVME 265
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H + +K+K KD+ RAV++LR E+AKR LSS QA IEI+S +EG DF ++TR
Sbjct: 266 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTR 325
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
A+FEELN DLFR T++PV+K L D+ L K I EIVLVGGSTRIPKIQ+L+ +FFN KE
Sbjct: 326 AKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEP 385
Query: 1251 NKTINP 1268
++ INP
Sbjct: 386 SRGINP 391
>ref|NP_034611.2| stress-70 protein, mitochondrial [Mus musculus].
Length = 679
Score = 347 bits (890), Expect = 1e-95
Identities = 188/370 (50%), Positives = 248/370 (67%), Gaps = 5/370 (1%)
Frame = +3
Query: 174 RGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 350
+G +GIDLGTT SCV V + + +++ N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 52 KGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVT 111
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT + KRLIGR+++D VQ D K+ PF++V VE G K + P +I +
Sbjct: 112 NPNNTFYATKRLIGRRYDDPEVQKDTKNVPFKIV-RASNGDAWVEAHG--KLYSPSQIGA 168
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
VL KMKE AE YLG ++AVITVPAYFNDSQRQATKDAG I+GLNVLR+INEPTAAA+
Sbjct: 169 FVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAAL 228
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK +K + ++DLGGGTFD+SIL I+ G+FEVKST GDT LGGEDFD ++
Sbjct: 229 AYGLDK----SEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLR 284
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVD----FYT 1058
H+ +EFKR+ D+ A++R+R A E+AK LSSS Q I + L
Sbjct: 285 HIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNM 344
Query: 1059 SITRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFN 1238
+TRA+FE + DL + T+ P +KA++DA + K I E++LVGG TR+PK+Q+ + D F
Sbjct: 345 KLTRAQFEGIVTDLIKRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFG 404
Query: 1239 CKELNKTINP 1268
+ +K +NP
Sbjct: 405 -RAPSKAVNP 413
>ref|NP_056580.2| heat shock 70 kDa protein 14 isoform 1 [Mus musculus].
Length = 509
Score = 258 bits (658), Expect = 9e-69
Identities = 133/362 (36%), Positives = 217/362 (59%)
Frame = +3
Query: 183 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 362
AIG+ LG T +CV V++ G+ +++AND G+R TP+ VA+++ E+++G AAK + ++
Sbjct: 3 AIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAIVAYSEREQVVGLAAKQSRIRHVSS 62
Query: 363 TIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISSMVLT 542
T+ K+++GR D Q + V+ + GK + +++ E K PE+++ ++ +
Sbjct: 63 TVVKVKQILGRSSADPQAQKYISESKCLVIEKNGKLRYEIDTGEETKLVNPEDVARLIFS 122
Query: 543 KMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 722
KMKE A + LG V+TVP F + Q+ A +A G NVLR+I+EP+AA +AYG+
Sbjct: 123 KMKETAHSVLGSDANDVVVTVPFDFGEKQKSALGEAAGAAGFNVLRLIHEPSAALLAYGI 182
Query: 723 DKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAE 902
+ G+ NVL+F LGG + +S++ + G++ V ST ++GG F + + +LA
Sbjct: 183 GQDH-PTGKSNVLVFKLGGTSLSLSVMEVNSGMYRVLSTNTSDNIGGAHFTDTLAQYLAS 241
Query: 903 EFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFE 1082
EF+R K D+ RA+ +L + E AK +LS+ A+ +DSLYEG DF +++RARFE
Sbjct: 242 EFQRLFKHDVRGNARAMMKLMNSAEVAKHSLSTLGSANCFVDSLYEGQDFDCNVSRARFE 301
Query: 1083 ELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKELNKTI 1262
L + LF E + + LR I ++VL GGS+RIPK+Q+L+ D F +L +I
Sbjct: 302 LLCSPLFNKCTEAIRELLRQTGFTADDINKVVLCGGSSRIPKLQQLIKDLFPAVDLLNSI 361
Query: 1263 NP 1268
P
Sbjct: 362 PP 363
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,587,782
Number of extensions: 856605
Number of successful extensions: 3201
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 3159
Number of HSP's successfully gapped: 16
Length of query: 427
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 323
Effective length of database: 12,493,815
Effective search space: 4035502245
Effective search space used: 4035502245
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008674
(1282 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_068814.2| heat shock-related 70 kDa protein 2 [Homo sapie... 710 0.0
Alignment gi|NP_694881.1| heat shock cognate 71 kDa protein isoform 2 [Ho... 644 0.0
Alignment gi|NP_006588.1| heat shock cognate 71 kDa protein isoform 1 [Ho... 644 0.0
Alignment gi|NP_005336.3| heat shock 70 kDa protein 1A/1B [Homo sapiens]. 617 e-177
Alignment gi|NP_005337.2| heat shock 70 kDa protein 1A/1B [Homo sapiens]. 617 e-177
Alignment gi|NP_005518.3| heat shock 70 kDa protein 1-like [Homo sapiens]. 612 e-175
Alignment gi|NP_002146.2| heat shock 70 kDa protein 6 [Homo sapiens]. 601 e-172
Alignment gi|NP_005338.1| 78 kDa glucose-regulated protein precursor [Hom... 483 e-136
Alignment gi|NP_004125.3| stress-70 protein, mitochondrial precursor [Hom... 348 6e-96
Alignment gi|NP_057383.2| heat shock 70 kDa protein 14 isoform 1 [Homo sa... 262 4e-70
>ref|NP_068814.2| heat shock-related 70 kDa protein 2 [Homo sapiens].
Length = 639
Score = 710 bits (1832), Expect = 0.0
Identities = 361/368 (98%), Positives = 362/368 (98%)
Frame = +3
Query: 165 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 344
MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 1 MSARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 60
Query: 345 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEI 524
AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGE KTFFPEEI
Sbjct: 61 AMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEI 120
Query: 525 SSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 704
SSMVLTKMKEIAEAYLGGKV SAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA
Sbjct: 121 SSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAA 180
Query: 705 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 884
AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM
Sbjct: 181 AIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 240
Query: 885 VSHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 1064
VSHLAEEFKRKHKKDIGP KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI
Sbjct: 241 VSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSI 300
Query: 1065 TRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCK 1244
TRARFEELNADLFRGTLEPVEKALRDA LDKGQIQEIVLVGGSTRIPKIQKLL DFFN K
Sbjct: 301 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK 360
Query: 1245 ELNKTINP 1268
ELNK+INP
Sbjct: 361 ELNKSINP 368
>ref|NP_694881.1| heat shock cognate 71 kDa protein isoform 2 [Homo sapiens].
Length = 493
Score = 644 bits (1660), Expect = 0.0
Identities = 323/366 (88%), Positives = 343/366 (93%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_006588.1| heat shock cognate 71 kDa protein isoform 1 [Homo sapiens].
Length = 646
Score = 644 bits (1660), Expect = 0.0
Identities = 323/366 (88%), Positives = 343/366 (93%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 62 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 182 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEELNADLFRGTL+PVEKALRDA LDK QI +IVLVGGSTRIPKIQKLL DFFN KEL
Sbjct: 300 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKEL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_005336.3| heat shock 70 kDa protein 1A/1B [Homo sapiens].
Length = 641
Score = 617 bits (1591), Expect = e-177
Identities = 310/366 (84%), Positives = 335/366 (91%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+ AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+
Sbjct: 2 AKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF D VQSDMKHWPF+V+++G KPKVQV YKGE K F+PEEISS
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLD+ G GE+NVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+
Sbjct: 182 AYGLDRTG--KGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EG+DFYTSITR
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL +DLFR TLEPVEKALRDA LDK QI ++VLVGGSTRIPK+QKLL DFFN ++L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_005337.2| heat shock 70 kDa protein 1A/1B [Homo sapiens].
Length = 641
Score = 617 bits (1591), Expect = e-177
Identities = 310/366 (84%), Positives = 335/366 (91%)
Frame = +3
Query: 171 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 350
A+ AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+
Sbjct: 2 AKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT+FDAKRLIGRKF D VQSDMKHWPF+V+++G KPKVQV YKGE K F+PEEISS
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISS 121
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKEIAEAYLG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAI
Sbjct: 122 MVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 181
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLD+ G GE+NVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+
Sbjct: 182 AYGLDRTG--KGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 239
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EG+DFYTSITR
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITR 299
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
ARFEEL +DLFR TLEPVEKALRDA LDK QI ++VLVGGSTRIPK+QKLL DFFN ++L
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 1251 NKTINP 1268
NK+INP
Sbjct: 360 NKSINP 365
>ref|NP_005518.3| heat shock 70 kDa protein 1-like [Homo sapiens].
Length = 641
Score = 612 bits (1577), Expect = e-175
Identities = 308/367 (83%), Positives = 336/367 (91%)
Frame = +3
Query: 168 SARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 347
+A+G AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 3 TAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 62
Query: 348 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEIS 527
MNP NT+FDAKRLIGRKF D VQ+DMK WPF+V++EGGKPKV V YKGE K F+PEEIS
Sbjct: 63 MNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEIS 122
Query: 528 SMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAA 707
SMVLTK+KE AEA+LG V +AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAA
Sbjct: 123 SMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 182
Query: 708 IAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 887
IAYGLDK G GE++VLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V
Sbjct: 183 IAYGLDKGG--QGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLV 240
Query: 888 SHLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSIT 1067
SH EEFKRKHKKDI KRAVRRLRTACERAKRTLSSSTQA++EIDSLYEG+DFYTSIT
Sbjct: 241 SHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSIT 300
Query: 1068 RARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKE 1247
RARFEEL ADLFRGTLEPVEKALRDA +DK +I +IVLVGGSTRIPK+Q+LL D+FN ++
Sbjct: 301 RARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRD 360
Query: 1248 LNKTINP 1268
LNK+INP
Sbjct: 361 LNKSINP 367
>ref|NP_002146.2| heat shock 70 kDa protein 6 [Homo sapiens].
Length = 643
Score = 601 bits (1549), Expect = e-172
Identities = 299/362 (82%), Positives = 332/362 (91%)
Frame = +3
Query: 183 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 362
A+GIDLGTTYSCVGVFQ G+VEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP N
Sbjct: 8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHN 67
Query: 363 TIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISSMVLT 542
T+FDAKRLIGRKF D TVQSDMKHWPFRVVSEGGKPKV+V Y+GE KTF+PEEISSMVL+
Sbjct: 68 TVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEISSMVLS 127
Query: 543 KMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 722
KMKE AEAYLG V+ AVITVPAYFNDSQRQATKDAG I GLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 723 DKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAE 902
D++G GE+NVLIFDLGGGTFDVS+L+I+ G+FEVK+TAGDTHLGGEDFDNR+V+H E
Sbjct: 188 DRRG--AGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFME 245
Query: 903 EFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFE 1082
EF+RKH KD+ KRA+RRLRTACERAKRTLSSSTQA++EIDSL+EGVDFYTSITRARFE
Sbjct: 246 EFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFE 305
Query: 1083 ELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKELNKTI 1262
EL +DLFR TLEPVEKALRDA LDK QI ++VLVGGSTRIPK+QKLL DFFN KELNK+I
Sbjct: 306 ELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGKELNKSI 365
Query: 1263 NP 1268
NP
Sbjct: 366 NP 367
>ref|NP_005338.1| 78 kDa glucose-regulated protein precursor [Homo sapiens].
Length = 654
Score = 483 bits (1244), Expect = e-136
Identities = 248/366 (67%), Positives = 297/366 (81%), Gaps = 2/366 (0%)
Frame = +3
Query: 177 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 353
G +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 28 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 87
Query: 354 PTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKG-EIKTFFPEEISS 530
P NT+FDAKRLIGR + D +VQ D+K PF+VV + KP +QV+ G + KTF PEEIS+
Sbjct: 88 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISA 147
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
MVLTKMKE AEAYLG KV AV+TVPAYFND+QRQATKDAGTI GLNV+RIINEPTAAAI
Sbjct: 148 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 207
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK+ GEKN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++
Sbjct: 208 AYGLDKRE---GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVME 264
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 1070
H + +K+K KD+ RAV++LR E+AKR LSS QA IEI+S YEG DF ++TR
Sbjct: 265 HFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTR 324
Query: 1071 ARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKEL 1250
A+FEELN DLFR T++PV+K L D+ L K I EIVLVGGSTRIPKIQ+L+ +FFN KE
Sbjct: 325 AKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEP 384
Query: 1251 NKTINP 1268
++ INP
Sbjct: 385 SRGINP 390
>ref|NP_004125.3| stress-70 protein, mitochondrial precursor [Homo sapiens].
Length = 679
Score = 348 bits (893), Expect = 6e-96
Identities = 189/370 (51%), Positives = 249/370 (67%), Gaps = 5/370 (1%)
Frame = +3
Query: 174 RGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 350
+G +GIDLGTT SCV V + + +++ N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 52 KGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVT 111
Query: 351 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 530
NP NT + KRLIGR+++D VQ D+K+ PF++V VE G K + P +I +
Sbjct: 112 NPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIV-RASNGDAWVEAHG--KLYSPSQIGA 168
Query: 531 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 710
VL KMKE AE YLG ++AVITVPAYFNDSQRQATKDAG I+GLNVLR+INEPTAAA+
Sbjct: 169 FVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAAL 228
Query: 711 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 890
AYGLDK +K + ++DLGGGTFD+SIL I+ G+FEVKST GDT LGGEDFD ++
Sbjct: 229 AYGLDK----SEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLR 284
Query: 891 HLAEEFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVD----FYT 1058
H+ +EFKR+ D+ A++R+R A E+AK LSSS Q I + L
Sbjct: 285 HIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDSSGPKHLNM 344
Query: 1059 SITRARFEELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFN 1238
+TRA+FE + DL R T+ P +KA++DA + K I E++LVGG TR+PK+Q+ + D F
Sbjct: 345 KLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFG 404
Query: 1239 CKELNKTINP 1268
+ +K +NP
Sbjct: 405 -RAPSKAVNP 413
>ref|NP_057383.2| heat shock 70 kDa protein 14 isoform 1 [Homo sapiens].
Length = 509
Score = 262 bits (670), Expect = 4e-70
Identities = 137/362 (37%), Positives = 214/362 (59%)
Frame = +3
Query: 183 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 362
AIG+ LG T +CV V++ G+ ++AND G+R TP+ VA+++ E ++G AAK N +N
Sbjct: 3 AIGVHLGCTSACVAVYKDGRAGVVANDAGDRVTPAVVAYSENEEIVGLAAKQSRIRNISN 62
Query: 363 TIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISSMVLT 542
T+ K+++GR D Q + V+ + GK + +++ E K PE+++ ++ +
Sbjct: 63 TVMKVKQILGRSSSDPQAQKYIAESKCLVIEKNGKLRYEIDTGEETKFVNPEDVARLIFS 122
Query: 543 KMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 722
KMKE A + LG VITVP F + Q+ A +A G NVLR+I+EP+AA +AYG+
Sbjct: 123 KMKETAHSVLGSDANDVVITVPFDFGEKQKNALGEAARAAGFNVLRLIHEPSAALLAYGI 182
Query: 723 DKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAE 902
+ G+ N+L+F LGG + +S++ + GI+ V ST D ++GG F + +LA
Sbjct: 183 GQDS-PTGKSNILVFKLGGTSLSLSVMEVNSGIYRVLSTNTDDNIGGAHFTETLAQYLAS 241
Query: 903 EFKRKHKKDIGPTKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFE 1082
EF+R K D+ RA+ +L + E AK +LS+ A+ +DSLYEG DF +++RARFE
Sbjct: 242 EFQRSFKHDVRGNARAMMKLTNSAEVAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFE 301
Query: 1083 ELNADLFRGTLEPVEKALRDA*LDKGQIQEIVLVGGSTRIPKIQKLLPDFFNCKELNKTI 1262
L + LF +E + L I ++VL GGS+RIPK+Q+L+ D F EL +I
Sbjct: 302 LLCSPLFNKCIEAIRGLLDQNGFTADDINKVVLCGGSSRIPKLQQLIKDLFPAVELLNSI 361
Query: 1263 NP 1268
P
Sbjct: 362 PP 363
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,291,954
Number of extensions: 1029721
Number of successful extensions: 4062
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4026
Number of HSP's successfully gapped: 17
Length of query: 427
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 322
Effective length of database: 14,835,944
Effective search space: 4777173968
Effective search space used: 4777173968
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008674
(1282 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 2444 0.0
gb|GL896522.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 476 e-131
gb|GL895435.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 202 3e-49
Sscrofa_Chr09 74 2e-10
gb|GL896661.1| Sus scrofa unplaced genomic scaffold chrU_scaffold98 66 5e-08
Sscrofa_Chr01 60 3e-06
>Sscrofa_Chr07
|| Length = 134764511
Score = 2444 bits (1233), Expect = 0.0
Identities = 1260/1269 (99%)
Strand = Plus / Plus
Query: 1 gaaggcggcagagaggcgactataagagcgggcagccgagccggggggagcgagagacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94987569 gaaggcggcagagaggcgactataagagcgggcagccgagccggggggagcgagagacgc 94987628
Query: 61 tggttgcgctcgtggtgtgtggtgcaagcgaccgttagctgaggccgcggattttctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94987629 tggttgcgctcgtggtgtgtggtgcaagcgaccgttagctgaggccgcggattttctgtg 94987688
Query: 121 ccaggtgttctcgtctaacgtcgcttgctcgtctttcagtcaggatgtctgcccgcggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94987689 ccaggtgttctcgtctaacgtcgcttgctcgtctttcagtcaggatgtctgcccgcggcc 94987748
Query: 181 cggctatcggcatcgacctgggcactacctactcgtgcgtgggggtcttccaacatggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94987749 cggctatcggcatcgacctgggcactacctactcgtgcgtgggggtcttccaacatggca 94987808
Query: 241 aggtggagatcatcgccaacgaccagggcaaccgcaccacccccagctacgtggccttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94987809 aggtggagatcatcgccaacgaccagggcaaccgcaccacccccagctacgtggccttca 94987868
Query: 301 ccgacaccgagcgcctcatcggcgacgccgccaagaaccaggtggccatgaaccccacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94987869 ccgacaccgagcgcctcatcggcgacgccgccaagaaccaggtggccatgaaccccacga 94987928
Query: 361 acaccatcttcgacgccaagaggctgatcggacggaagttcgaggacgccacagtgcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94987929 acaccatcttcgacgccaagaggctgatcggacggaagttcgaggacgccacagtgcaat 94987988
Query: 421 cggacatgaaacactggccattccgggtggtgagcgagggagggaagcccaaagtgcagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94987989 cggacatgaaacactggccattccgggtggtgagcgagggagggaagcccaaagtgcagg 94988048
Query: 481 tggagtacaagggagagatcaagaccttcttcccggaggagatctcttccatggtcctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988049 tggagtacaagggagagatcaagaccttcttcccggaggagatctcttccatggtcctca 94988108
Query: 541 ctaagatgaaggagatcgccgaagcctacctggggggcaaggtgcagagcgcggtcatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988109 ctaagatgaaggagatcgccgaagcctacctggggggcaaggtgcagagcgcggtcatca 94988168
Query: 601 ccgtccccgcctatttcaatgactctcagcgccaggccaccaaggacgcgggcaccatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988169 ccgtccccgcctatttcaatgactctcagcgccaggccaccaaggacgcgggcaccatca 94988228
Query: 661 cgggccttaatgtgctgcgcatcatcaacgagcctacagcggcagccatcgcctacggcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988229 cgggccttaatgtgctgcgcatcatcaacgagcctacagcggcagccatcgcctacggcc 94988288
Query: 721 tggacaagaagggctgcgcgggcggcgagaagaacgtgctcattttcgacctgggcggcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988289 tggacaagaagggctgcgcgggcggcgagaagaacgtgctcattttcgacctgggcggcg 94988348
Query: 781 gcactttcgacgtgtccatcctgaccatcgaggacggcatcttcgaggtgaagtccacgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988349 gcactttcgacgtgtccatcctgaccatcgaggacggcatcttcgaggtgaagtccacgg 94988408
Query: 841 ctggcgacacccacctgggcggcgaggacttcgataaccgcatggtgagccacttggccg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988409 ctggcgacacccacctgggcggcgaggacttcgataaccgcatggtgagccacttggccg 94988468
Query: 901 aggagttcaaacgcaagcacaagaaggacattgggcccactaagcgcgcggtgcggcgac 960
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 94988469 aggagttcaaacgcaagcacaagaaggacattgggcccaacaagcgcgcggtgcggcgac 94988528
Query: 961 tccgcaccgcctgcgagcgcgctaagcgcaccctgagctcgtccacacaggcgagcatcg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988529 tccgcaccgcctgcgagcgcgctaagcgcaccctgagctcgtccacacaggcgagcatcg 94988588
Query: 1021 agatcgactcgctctacgagggcgtggacttctacacgtccatcacccgggcccgctttg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988589 agatcgactcgctctacgagggcgtggacttctacacgtccatcacccgggcccgctttg 94988648
Query: 1081 aggagctcaacgcagacctgtttcgcgggaccctcgagccggtggagaaggcgctgcgcg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94988649 aggagctcaacgcagacctgtttcgcgggaccctcgagccggtggagaaggcgctgcgcg 94988708
Query: 1141 acgcctagctggacaagggccagatccaggagatcgttctggtgggcggctccactcgca 1200
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 94988709 acgccaagctggacaagggccagatccaggagatcgtgctggtgggcggctccactcgca 94988768
Query: 1201 tccccaagatccaaaagctgctgccggatttcttcaactgtaaggagctgaacaagacca 1260
||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||| ||
Sbjct: 94988769 tccccaagatccagaagctgctgcaggatttcttcaacggcaaggagctgaacaagagca 94988828
Query: 1261 tcaaccctg 1269
|||||||||
Sbjct: 94988829 tcaaccctg 94988837
>gb|GL896522.1| Sus scrofa unplaced genomic scaffold chrU_scaffold854
Length = 16607
Score = 476 bits (240), Expect = e-131
Identities = 770/947 (81%), Gaps = 6/947 (0%)
Strand = Plus / Minus
Query: 292 tggccttcaccgacaccgagcgcctcatcggcgacgccgccaagaaccaggtggccatga 351
|||||||||| ||||||||||| || |||||||| || ||||||||||||||||| |||
Sbjct: 1798 tggccttcacggacaccgagcggctgatcggcgatgcggccaagaaccaggtggcgctga 1739
Query: 352 accccacgaacaccatcttcgacgccaagaggctgatcggacggaagttcgaggacgcca 411
|||| |||||| | || ||||| ||| |||||||||| || ||||||| ||| |
Sbjct: 1738 acccgcagaacacggtgtttgacgcgaagcggctgatcgggcgcaagttcggcgacccgg 1679
Query: 412 cagtgcaatcggacatgaaacactggccattccgggtggtgagcgagggagggaagccca 471
||||| |||||||||| |||||||| ||||||||| | | ||| || | |||||||
Sbjct: 1678 tggtgcaggcggacatgaagcactggcccttccgggtgatcaacgacggggacaagccca 1619
Query: 472 aagtgcaggtggagtacaagggagagatcaagaccttcttcccggaggagatctcttcca 531
| ||||||||| |||||||| |||| |||| | |||| ||||||||||||||| || |
Sbjct: 1618 aggtgcaggtgagctacaagggcgagaccaaggcgttctacccggaggagatctcgtcga 1559
Query: 532 tggtcctcactaagatgaaggagatcgccgaagcctacctggggggcaaggtgcagagcg 591
|||| || || |||||||||||||||||||| || |||||||| | |||| | ||
Sbjct: 1558 tggtgctgaccaagatgaaggagatcgccgaggcgtacctgggccacccggtgagcaacg 1499
Query: 592 cggtcatcaccgtccccgcctatttcaatgactctcagcgccaggccaccaaggacgcgg 651
|||| ||||| || || ||||| ||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 1498 cggtgatcacggtgccggcctacttcaacgactcgcagcggcaggccaccaaggatgcgg 1439
Query: 652 gcaccatcacgggccttaatgtgctgcgcatcatcaacgagcctacagcggcagccatcg 711
| ||| |||| || || |||||||| |||||||||||||| || ||||| |||||||
Sbjct: 1438 gggtgatcgcggggctgaacgtgctgcggatcatcaacgagcccacggcggcggccatcg 1379
Query: 712 cctacggcctggacaagaagggctgcgcgggcggcgagaagaacgtgctcattttcgacc 771
||||||||||||||| || |||| | || || |||||||| || |||||||
Sbjct: 1378 cctacggcctggacaggacgggcaagggggagcgc------aacgtgctgatcttcgacc 1325
Query: 772 tgggcggcggcactttcgacgtgtccatcctgaccatcgaggacggcatcttcgaggtga 831
||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1324 tgggcgggggcacgttcgacgtgtccatcctgacgatcgacgacggcatcttcgaggtga 1265
Query: 832 agtccacggctggcgacacccacctgggcggcgaggacttcgataaccgcatggtgagcc 891
|| ||||||| || ||||| ||||||||||||||||||||||| ||| | |||||| ||
Sbjct: 1264 aggccacggcgggggacacgcacctgggcggcgaggacttcgacaacaggctggtgaacc 1205
Query: 892 acttggccgaggagttcaaacgcaagcacaagaaggacattgggcccactaagcgcgcgg 951
|||| | ||||||||||| | ||||||||||||||||| | | | ||||| ||||
Sbjct: 1204 acttcgtggaggagttcaagaggaagcacaagaaggacatcagccagaacaagcgggcgg 1145
Query: 952 tgcggcgactccgcaccgcctgcgagcgcgctaagcgcaccctgagctcgtccacacagg 1011
|| |||| || ||||| ||||||||||| || ||| | |||||| || ||| ||||
Sbjct: 1144 tgaggcggctgcgcacggcctgcgagcgggccaagaggaccctgtcgtccagcacgcagg 1085
Query: 1012 cgagcatcgagatcgactcgctctacgagggcgtggacttctacacgtccatcacccggg 1071
| ||| | ||||||||||| || | ||||||| | |||||||||||||||||||||||||
Sbjct: 1084 ccagcctggagatcgactccctgttcgagggcatcgacttctacacgtccatcacccggg 1025
Query: 1072 cccgctttgaggagctcaacgcagacctgtttcgcgggaccctcgagccggtggagaagg 1131
| ||||| |||||||| | | |||||||| ||| | ||||| ||||||||||||||||
Sbjct: 1024 cgcgcttcgaggagctgtgctcggacctgttccgcagcaccctggagccggtggagaagg 965
Query: 1132 cgctgcgcgacgcctagctggacaagggccagatccaggagatcgttctggtgggcggct 1191
| ||||||||||| |||||||||||| ||||||||| || | || |||||||| ||||
Sbjct: 964 ctctgcgcgacgcgaagctggacaaggcccagatccacgacctggtgctggtggggggct 905
Query: 1192 ccactcgcatccccaagatccaaaagctgctgccggatttcttcaac 1238
| || |||||||||||| | || |||||||||| ||| |||||||||
Sbjct: 904 cgacgcgcatccccaaggtgcagaagctgctgcaggacttcttcaac 858
Score = 139 bits (70), Expect = 4e-30
Identities = 289/362 (79%)
Strand = Plus / Plus
Query: 771 ctgggcggcggcactttcgacgtgtccatcctgaccatcgaggacggcatcttcgaggtg 830
||||| || ||||| || || ||||||||||||||||| || || || || || |||||
Sbjct: 13439 ctgggtggaggcacatttgatgtgtccatcctgaccatagatgatgggatttttgaggtc 13498
Query: 831 aagtccacggctggcgacacccacctgggcggcgaggacttcgataaccgcatggtgagc 890
||| |||| ||||| ||||||||| ||||||||||||||||||| ||| | ||||||||
Sbjct: 13499 aaggccacagctggggacacccacttgggcggcgaggacttcgacaacaggctggtgagc 13558
Query: 891 cacttggccgaggagttcaaacgcaagcacaagaaggacattgggcccactaagcgcgcg 950
||||| | ||||||||||| | ||||||||||||||||| | | | ||||| |||
Sbjct: 13559 cacttcgtggaggagttcaagaggaagcacaagaaggacatcagccagaacaagcgggcg 13618
Query: 951 gtgcggcgactccgcaccgcctgcgagcgcgctaagcgcaccctgagctcgtccacacag 1010
||| |||| || ||||| ||||||||||| || ||| | |||||| || ||| |||
Sbjct: 13619 gtgaggcggctgcgcacggcctgcgagcgggccaagaggaccctgtcgtccagcacgcag 13678
Query: 1011 gcgagcatcgagatcgactcgctctacgagggcgtggacttctacacgtccatcacccgg 1070
|| | | | || || || ||||| ||||| ||| | || |||||||| ||||||||| |
Sbjct: 13679 gccaacttggaaattgattcgctttacgaaggcatcgatttctacacatccatcaccaga 13738
Query: 1071 gcccgctttgaggagctcaacgcagacctgtttcgcgggaccctcgagccggtggagaag 1130
||||| ||||| ||||| ||||||||||||| | || ||||| |||||||||||||||
Sbjct: 13739 gcccggtttgaagagctgtgcgcagacctgtttaggggcaccctggagccggtggagaag 13798
Query: 1131 gc 1132
||
Sbjct: 13799 gc 13800
Score = 67.9 bits (34), Expect = 1e-08
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 609 gcctatttcaatgactctcagcgccaggccaccaagga 646
|||||||||||||||||||| |||||||||||||||||
Sbjct: 13283 gcctatttcaatgactctcaacgccaggccaccaagga 13320
>gb|GL895435.1| Sus scrofa unplaced genomic scaffold chrU_scaffold400
Length = 1092
Score = 202 bits (102), Expect = 3e-49
Identities = 746/961 (77%), Gaps = 6/961 (0%)
Strand = Plus / Plus
Query: 277 ccacccccagctacgtggccttcaccgacaccgagcgcctcatcggcgacgccgccaaga 336
||||||||||||||||||||||||||||||||||||| || | ||||| || |||||||
Sbjct: 1 ccacccccagctacgtggccttcaccgacaccgagcggctggtgggcgatgcagccaaga 60
Query: 337 accaggtggccatgaaccccacgaacaccatcttcgacgccaagaggctgatcggacgga 396
||||| |||| ||||||| ||| ||| | || ||||||||| |||| || || || |
Sbjct: 61 gccaggcggccctgaacccgcagaataccgtgtttgacgccaagcggctaattgggcgca 120
Query: 397 agttcgaggacgccacagtgcaatcggacatgaaacactggccattccgggtggtgagcg 456
|||| | ||| |||| ||||| || ||| |||| |||||||| |||| |||||||||||
Sbjct: 121 agtttgcagaccccaccgtgcagtcagacttgaagcactggcctttccaggtggtgagcg 180
Query: 457 agggagggaagcccaaagtgcaggtggagtacaagggagagatcaagaccttcttcccgg 516
|||| ||||||||||| |||| || ||| || ||| |||| | |||| |||||
Sbjct: 181 agggtgggaagcccaaggtgcgcgtttcctaccgtggggaggacaaggcgttctacccgg 240
Query: 517 aggagatctcttccatggtcctcactaagatgaaggagatcgccgaagcctacctggggg 576
||||||| || |||||||| || | ||||||||||||| || || || ||||||||
Sbjct: 241 aggagatttcgtccatggtgctgagcaagatgaaggagactgcggaggcgtacctgggcc 300
Query: 577 gcaaggtgcagagcgcggtcatcaccgtccccgcctatttcaatgactctcagcgccagg 636
||| | ||| || |||||||| || ||||| ||||| ||||||||||| ||||
Sbjct: 301 agcccgtgaggcacgctgtgatcaccgtgcctgcctacttcaacgactctcagcgtcagg 360
Query: 637 ccaccaaggacgcgggcaccatcacgggccttaatgtgctgcgcatcatcaacgagccta 696
||||||||||||| || |||| | || || || |||||| | ||||| || ||||| |
Sbjct: 361 ccaccaaggacgcaggtgccattgcagggctcaacgtgctgaggatcattaatgagccca 420
Query: 697 cagcggcagccatcgcctacggcctggacaagaagggctgcgcgggcggcgagaagaacg 756
|||| || ||||||||||| ||||||||| || |||| | || ||| |||||
Sbjct: 421 cagctgctgccatcgcctatggcctggaccggaggggc------gctggtgagcggaacg 474
Query: 757 tgctcattttcgacctgggcggcggcactttcgacgtgtccatcctgaccatcgaggacg 816
|||||||||||||| |||| || || || ||||||||||| |||| || || || | |
Sbjct: 475 tgctcattttcgacttgggtggaggaaccttcgacgtgtcggtccttactattgacgcag 534
Query: 817 gcatcttcgaggtgaagtccacggctggcgacacccacctgggcggcgaggacttcgata 876
| |||| ||||||||| |||||||||| ||||| |||||||| || ||||||||||| |
Sbjct: 535 gtgtctttgaggtgaaggccacggctggagacactcacctgggtggagaggacttcgaca 594
Query: 877 accgcatggtgagccacttggccgaggagttcaaacgcaagcacaagaaggacattgggc 936
|||| |||||| |||||| |||||||| ||| ||||||| ||||||| | |
Sbjct: 595 accgtttggtgaaccacttcatggaggagtttcgacggaagcacaggaaggacttaagca 654
Query: 937 ccactaagcgcgcggtgcggcgactccgcaccgcctgcgagcgcgctaagcgcaccctga 996
| | || || || |||| | |||||||||||||| |||||||| || |||||||||
Sbjct: 655 cgaacaaacgggccctgcgcaggctccgcaccgcctgtgagcgcgccaaacgcaccctgt 714
Query: 997 gctcgtccacacaggcgagcatcgagatcgactcgctctacgagggcgtggacttctaca 1056
|| ||| ||||| | | || |||||||| |||| ||||| || ||||||||||
Sbjct: 715 cttccagcacccaggccacgctggaaatcgactccctctttgagggtgtagacttctaca 774
Query: 1057 cgtccatcacccgggcccgctttgaggagctcaacgcagacctgtttcgcgggaccctcg 1116
| || ||||| || ||||||||||| || || | ||||||| || ||| | ||||| |
Sbjct: 775 cttctatcactcgagcccgctttgaagaactgtgctcagacctcttccgcagcaccctgg 834
Query: 1117 agccggtggagaaggcgctgcgcgacgcctagctggacaagggccagatccaggagatcg 1176
|||| |||||||| || ||||| || ||| |||||||||||| |||||||| || || |
Sbjct: 835 agccagtggagaaagccctgcgggatgccaagctggacaaggctcagatccatgatattg 894
Query: 1177 ttctggtgggcggctccactcgcatccccaagatccaaaagctgctgccggatttcttca 1236
| || ||||| ||||| || |||||||||||||| || ||||| |||| ||| |||||||
Sbjct: 895 tcctagtgggtggctctacccgcatccccaagatacagaagcttctgcaggacttcttca 954
Query: 1237 a 1237
|
Sbjct: 955 a 955
>Sscrofa_Chr09
|| Length = 153670197
Score = 73.8 bits (37), Expect = 2e-10
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 1095 gacctgtttcgcgggaccctcgagccggtggagaaggcgctgcgcgacgcctagctggac 1154
|||||||| || || ||||| || || |||||||| || || || || ||| |||| |||
Sbjct: 55305861 gacctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagac 55305920
Query: 1155 aagggccagatccaggagatcgttctggtgggcggctccactcgcatccccaagatccaa 1214
||| |||||||| || || || |||||||| ||||| || || ||||||||||||||
Sbjct: 55305921 aagtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccag 55305980
Query: 1215 aagctgctgccggatttcttcaactgtaaggagctgaacaagaccatcaaccc 1267
||||| |||| ||| ||||||||| | || || ||||| |||| |||||||||
Sbjct: 55305981 aagcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccc 55306033
Score = 73.8 bits (37), Expect = 2e-10
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 1095 gacctgtttcgcgggaccctcgagccggtggagaaggcgctgcgcgacgcctagctggac 1154
|||||||| || || ||||| || || |||||||| || || || || ||| |||| |||
Sbjct: 55407675 gacctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagac 55407734
Query: 1155 aagggccagatccaggagatcgttctggtgggcggctccactcgcatccccaagatccaa 1214
||| |||||||| || || || |||||||| ||||| || || ||||||||||||||
Sbjct: 55407735 aagtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccag 55407794
Query: 1215 aagctgctgccggatttcttcaactgtaaggagctgaacaagaccatcaaccc 1267
||||| |||| ||| ||||||||| | || || ||||| |||| |||||||||
Sbjct: 55407795 aagcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccc 55407847
Score = 61.9 bits (31), Expect = 8e-07
Identities = 97/119 (81%)
Strand = Plus / Plus
Query: 753 aacgtgctcattttcgacctgggcggcggcactttcgacgtgtccatcctgaccatcgag 812
|||||||| || |||||| |||| || |||||||| || ||||| ||||| || || |||
Sbjct: 55305519 aacgtgctgatcttcgacttgggtggtggcacttttgatgtgtcaatcctcactattgag 55305578
Query: 813 gacggcatcttcgaggtgaagtccacggctggcgacacccacctgggcggcgaggactt 871
|| || ||||||||||| || || || ||||| || |||||| |||| || ||||||||
Sbjct: 55305579 gatggtatcttcgaggtcaaatctacagctggagatacccacttgggtggagaggactt 55305637
Score = 61.9 bits (31), Expect = 8e-07
Identities = 97/119 (81%)
Strand = Plus / Plus
Query: 753 aacgtgctcattttcgacctgggcggcggcactttcgacgtgtccatcctgaccatcgag 812
|||||||| || |||||| |||| || |||||||| || ||||| ||||| || || |||
Sbjct: 55407333 aacgtgctgatcttcgacttgggtggtggcacttttgatgtgtcaatcctcactattgag 55407392
Query: 813 gacggcatcttcgaggtgaagtccacggctggcgacacccacctgggcggcgaggactt 871
|| || ||||||||||| || || || ||||| || |||||| |||| || ||||||||
Sbjct: 55407393 gatggtatcttcgaggtcaaatctacagctggagatacccacttgggtggagaggactt 55407451
>gb|GL896661.1| Sus scrofa unplaced genomic scaffold chrU_scaffold98
Length = 147
Score = 65.9 bits (33), Expect = 5e-08
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 189 ggcatcgacctgggcactacctactcgtgcgtgggggtcttccaacatggcaaggtggag 248
||||||||| |||| || || ||||| |||||||| || ||||| || || |||||||
Sbjct: 97 ggcatcgacttgggtaccacatactcctgcgtgggtgtgttccagcacggtcgggtggag 38
Query: 249 atcatcgccaacgaccagggcaaccgcaccaccccca 285
||| | || || |||||||||||||||||||||||||
Sbjct: 37 atcctagcaaatgaccagggcaaccgcaccaccccca 1
>Sscrofa_Chr01
|| Length = 315321322
Score = 60.0 bits (30), Expect = 3e-06
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 243 gtggagatcatcgccaacgaccagggcaaccgca 276
|||||||||||||||||||| |||||||||||||
Sbjct: 299758093 gtggagatcatcgccaacgatcagggcaaccgca 299758060
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 22,197,632
Number of extensions: 76
Number of successful extensions: 76
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 71
Number of HSP's successfully gapped: 19
Length of query: 1282
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1261
Effective length of database: 2,808,413,156
Effective search space: 3541408989716
Effective search space used: 3541408989716
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)