Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008987
(1255 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069070.1| xaa-Pro aminopeptidase 1 [Bos taurus]. 792 0.0
Alignment gi|NP_001192484.1| xaa-Pro aminopeptidase 2 [Bos taurus]. 315 4e-86
Alignment gi|XP_002699561.1| PREDICTED: X-prolyl aminopeptidase 2, membra... 315 4e-86
>ref|NP_001069070.1| xaa-Pro aminopeptidase 1 [Bos taurus].
Length = 623
Score = 792 bits (2046), Expect = 0.0
Identities = 387/395 (97%), Positives = 392/395 (99%)
Frame = +3
Query: 3 IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
+GLETIMLFIDGDRID P VKEHLL DLGLEAEYRIQVLPYKSILSELK+LCASLSPREK
Sbjct: 228 LGLETIMLFIDGDRIDAPIVKEHLLLDLGLEAEYRIQVLPYKSILSELKILCASLSPREK 287
Query: 183 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW
Sbjct: 288 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 347
Query: 363 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
LEKEVPKGGVTEISAA+KAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 348 LEKEVPKGGVTEISAANKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 407
Query: 543 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 408 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 467
Query: 723 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 468 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 527
Query: 903 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL++
Sbjct: 528 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNS 587
Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQ 1187
YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQ
Sbjct: 588 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQ 622
>ref|NP_001192484.1| xaa-Pro aminopeptidase 2 [Bos taurus].
Length = 673
Score = 315 bits (808), Expect = 4e-86
Identities = 166/359 (46%), Positives = 230/359 (64%), Gaps = 1/359 (0%)
Frame = +3
Query: 108 IQVLPYKSILSELKVLCASLSPREKVWVSDK-ASYAVSEAIPKDHRCCMPYTPICIAKAV 284
+QV Y + ++ A S KVW+ SY + E IPK+ Y+P+ + KAV
Sbjct: 299 VQVEDYGQVRDSVQ---AYTSGDVKVWIGTSYTSYGLYEVIPKEKLLEDTYSPVMVTKAV 355
Query: 285 KNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSF 464
KNS E +R +H++DAVA+ WLEK VP+G V E S A++ E+FR ++ F SF
Sbjct: 356 KNSKEQTLLRASHVRDAVAVIRYLVWLEKNVPQGTVDEFSGAEQLEKFRGEEEFFSGSSF 415
Query: 465 PTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEK 644
TIS++G N A+ HY+P E +R LS DE+YL+DSG QY DGTTDVTRT+H+GTP+A++K
Sbjct: 416 ETISASGLNAALAHYSPTKELHRKLSSDEIYLVDSGGQYWDGTTDVTRTVHWGTPSAFQK 475
Query: 645 ECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGP 824
E +T VL G+I +S VFP T G ++++FAR ALWD GL+Y HGTGHG+G+FL VHE P
Sbjct: 476 EAYTRVLIGNIDLSRLVFPAATSGRMVEAFARKALWDVGLNYGHGTGHGIGNFLCVHEWP 535
Query: 825 CGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEP 1004
G S+ + GM + EPGYY DG FGIR+E+V LVV KTKY LTFE
Sbjct: 536 VGFQ---SSNIAMAKGMFTSIEPGYYLDGEFGIRLEDVALVVEAKTKYPGT---YLTFEV 589
Query: 1005 LTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
++LVP +IDV L+ ++ +L+ Y+ R+ +G ELQ++ QE WL T+P++
Sbjct: 590 VSLVPYDRNLIDVSLLSPEQLQYLNRYYQIIREKVGPELQRRQLQEEFSWLQWHTEPLT 648
>ref|XP_002699561.1| PREDICTED: X-prolyl aminopeptidase 2, membrane-bound-like [Bos
taurus].
Length = 673
Score = 315 bits (808), Expect = 4e-86
Identities = 166/359 (46%), Positives = 230/359 (64%), Gaps = 1/359 (0%)
Frame = +3
Query: 108 IQVLPYKSILSELKVLCASLSPREKVWVSDK-ASYAVSEAIPKDHRCCMPYTPICIAKAV 284
+QV Y + ++ A S KVW+ SY + E IPK+ Y+P+ + KAV
Sbjct: 299 VQVEDYGQVRDSVQ---AYTSGDVKVWIGTSYTSYGLYEVIPKEKLLEDTYSPVMVTKAV 355
Query: 285 KNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSF 464
KNS E +R +H++DAVA+ WLEK VP+G V E S A++ E+FR ++ F SF
Sbjct: 356 KNSKEQTLLRASHVRDAVAVIRYLVWLEKNVPQGTVDEFSGAEQLEKFRGEEEFFSGSSF 415
Query: 465 PTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEK 644
TIS++G N A+ HY+P E +R LS DE+YL+DSG QY DGTTDVTRT+H+GTP+A++K
Sbjct: 416 ETISASGLNAALAHYSPTKELHRKLSSDEIYLVDSGGQYWDGTTDVTRTVHWGTPSAFQK 475
Query: 645 ECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGP 824
E +T VL G+I +S VFP T G ++++FAR ALWD GL+Y HGTGHG+G+FL VHE P
Sbjct: 476 EAYTRVLIGNIDLSRLVFPAATSGRMVEAFARKALWDVGLNYGHGTGHGIGNFLCVHEWP 535
Query: 825 CGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEP 1004
G S+ + GM + EPGYY DG FGIR+E+V LVV KTKY LTFE
Sbjct: 536 VGFQ---SSNIAMAKGMFTSIEPGYYLDGEFGIRLEDVALVVEAKTKYPGT---YLTFEV 589
Query: 1005 LTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
++LVP +IDV L+ ++ +L+ Y+ R+ +G ELQ++ QE WL T+P++
Sbjct: 590 VSLVPYDRNLIDVSLLSPEQLQYLNRYYQIIREKVGPELQRRQLQEEFSWLQWHTEPLT 648
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 54,068,613
Number of extensions: 1646110
Number of successful extensions: 4745
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4736
Number of HSP's successfully gapped: 3
Length of query: 418
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 313
Effective length of database: 14,207,134
Effective search space: 4446832942
Effective search space used: 4446832942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008987
(1255 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_544010.2| PREDICTED: similar to X-prolyl aminopeptidase (... 799 0.0
Alignment gi|XP_864026.1| PREDICTED: similar to X-prolyl aminopeptidase (... 799 0.0
Alignment gi|XP_864001.1| PREDICTED: similar to X-prolyl aminopeptidase (... 799 0.0
Alignment gi|XP_549245.2| PREDICTED: similar to Xaa-Pro aminopeptidase 2 ... 318 7e-87
>ref|XP_544010.2| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
soluble isoform 1 [Canis familiaris].
Length = 623
Score = 799 bits (2064), Expect = 0.0
Identities = 390/396 (98%), Positives = 394/396 (99%)
Frame = +3
Query: 3 IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
IGLETIMLFIDGDRID PSVKEHLLFDLGLEAEYRIQVLPYKSILSELK LCA+LSPREK
Sbjct: 228 IGLETIMLFIDGDRIDDPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKALCANLSPREK 287
Query: 183 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAES+GMRRAHIKDAVALCELFNW
Sbjct: 288 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNW 347
Query: 363 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
LEKEVPKGGV+EISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 348 LEKEVPKGGVSEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 407
Query: 543 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 408 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 467
Query: 723 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 468 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 527
Query: 903 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 528 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 587
Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 588 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 623
>ref|XP_864026.1| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
soluble isoform 4 [Canis familiaris].
Length = 624
Score = 799 bits (2064), Expect = 0.0
Identities = 390/396 (98%), Positives = 394/396 (99%)
Frame = +3
Query: 3 IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
IGLETIMLFIDGDRID PSVKEHLLFDLGLEAEYRIQVLPYKSILSELK LCA+LSPREK
Sbjct: 229 IGLETIMLFIDGDRIDDPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKALCANLSPREK 288
Query: 183 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAES+GMRRAHIKDAVALCELFNW
Sbjct: 289 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNW 348
Query: 363 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
LEKEVPKGGV+EISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 349 LEKEVPKGGVSEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 408
Query: 543 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 409 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 468
Query: 723 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 469 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 528
Query: 903 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 529 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 588
Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 589 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 624
>ref|XP_864001.1| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
soluble isoform 3 [Canis familiaris].
Length = 580
Score = 799 bits (2064), Expect = 0.0
Identities = 390/396 (98%), Positives = 394/396 (99%)
Frame = +3
Query: 3 IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
IGLETIMLFIDGDRID PSVKEHLLFDLGLEAEYRIQVLPYKSILSELK LCA+LSPREK
Sbjct: 185 IGLETIMLFIDGDRIDDPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKALCANLSPREK 244
Query: 183 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAES+GMRRAHIKDAVALCELFNW
Sbjct: 245 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNW 304
Query: 363 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
LEKEVPKGGV+EISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 305 LEKEVPKGGVSEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 364
Query: 543 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 365 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 424
Query: 723 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 425 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 484
Query: 903 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 485 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 544
Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 545 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 580
>ref|XP_549245.2| PREDICTED: similar to Xaa-Pro aminopeptidase 2 precursor (X-Pro
aminopeptidase 2) (Membrane-bound aminopeptidase P)
(Membrane-bound APP) (Membrane-bound AmP) (mAmP)
(Aminoacylproline aminopeptidase) [Canis familiaris].
Length = 890
Score = 318 bits (815), Expect = 7e-87
Identities = 166/390 (42%), Positives = 243/390 (62%), Gaps = 1/390 (0%)
Frame = +3
Query: 15 TIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREKVWVS 194
+I LF++ +D+ ++K + +Q+ Y + ++ S K+W+
Sbjct: 486 SIRLFVNKSCLDSETLK---YLNSSCSGSMCVQIENYSQVRGSVQTYA---SGDVKIWIG 539
Query: 195 DK-ASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEK 371
+Y + E IP + Y+P+ + KAVKNS E +R +H++DAVA+ WLEK
Sbjct: 540 TSYTTYGLYEVIPLEKLIEDTYSPVMVTKAVKNSKEQALLRASHVRDAVAVIRYLVWLEK 599
Query: 372 EVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDE 551
VPKG V E S A+ ++FR ++ SF TIS++G N A+ HY+P E +R LS DE
Sbjct: 600 NVPKGTVDEFSGAELLDKFRGEEDFSSGPSFETISASGLNAALAHYSPTKEQHRKLSSDE 659
Query: 552 VYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDS 731
+YL+DSG QY DGTTD+TRT+H+GTP+A++KE +T VL G+I +S VFP T G +++
Sbjct: 660 MYLLDSGGQYWDGTTDITRTVHWGTPSAFQKEAYTRVLIGNIDLSRLVFPASTSGRMMEI 719
Query: 732 FARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDG 911
FAR ALWD GL+Y HGTGHG+G+FL VHE P G + P+ GM + EPGYY+DG
Sbjct: 720 FARRALWDVGLNYGHGTGHGIGNFLCVHEWPVGFQ---SGNIPMAKGMFTSIEPGYYQDG 776
Query: 912 AFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHNYHL 1091
FGIRIE+V +VV KTK N + LTFE ++LVP +ID+ L+ + +L++Y+
Sbjct: 777 EFGIRIEDVAVVVEAKTKVNI-QKSYLTFEVVSLVPYDGNLIDISLLSSEHLQYLNHYYQ 835
Query: 1092 TCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
T R+ +G ELQ++ QE +WL R T+P+S
Sbjct: 836 TIREKVGPELQRRQLQEEFQWLQRHTEPLS 865
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 56,304,155
Number of extensions: 1690510
Number of successful extensions: 4489
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 4484
Number of HSP's successfully gapped: 4
Length of query: 418
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 313
Effective length of database: 15,374,224
Effective search space: 4812132112
Effective search space used: 4812132112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008987
(1255 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003133228.2| PREDICTED: xaa-Pro aminopeptidase 1 isoform ... 644 0.0
Alignment gi|NP_001004048.1| xaa-Pro aminopeptidase 2 precursor [Sus scro... 329 2e-90
>ref|XP_003133228.2| PREDICTED: xaa-Pro aminopeptidase 1 isoform 2 [Sus scrofa].
Length = 314
Score = 644 bits (1662), Expect = 0.0
Identities = 313/314 (99%), Positives = 314/314 (100%)
Frame = +3
Query: 249 MPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEF 428
MPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEF
Sbjct: 1 MPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEF 60
Query: 429 RRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTR 608
RRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTR
Sbjct: 61 RRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTR 120
Query: 609 TMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGH 788
TMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGH
Sbjct: 121 TMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGH 180
Query: 789 GVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKY 968
GVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKY
Sbjct: 181 GVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKY 240
Query: 969 NFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRDVIGKELQKQGRQEAL 1148
NFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+NYHLTCRDVIGKELQKQGRQEAL
Sbjct: 241 NFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEAL 300
Query: 1149 EWLIRETQPISKQH 1190
EWLIRETQPISKQH
Sbjct: 301 EWLIRETQPISKQH 314
>ref|NP_001004048.1| xaa-Pro aminopeptidase 2 precursor [Sus scrofa].
Length = 673
Score = 329 bits (844), Expect = 2e-90
Identities = 170/359 (47%), Positives = 234/359 (65%), Gaps = 1/359 (0%)
Frame = +3
Query: 108 IQVLPYKSILSELKVLCASLSPREKVWVSDK-ASYAVSEAIPKDHRCCMPYTPICIAKAV 284
+Q+ Y I ++ A S K+W+ + SY + E IPK+ Y+P+ I KAV
Sbjct: 299 VQLEDYSQIRDSIQ---AYTSGDVKIWIGTRYTSYGLYEVIPKEKLVEDDYSPVMITKAV 355
Query: 285 KNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSF 464
KNS E ++ +H++DAVA+ WLEK VP G V E S A + EEFR ++ F SF
Sbjct: 356 KNSREQALLKASHVRDAVAVIRYLAWLEKNVPTGTVDEFSGAKRVEEFRGEEEFFSGPSF 415
Query: 465 PTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEK 644
TIS++G N A+ HY+P E +R LS DE+YL+DSG QY DGTTD+TRT+H+GTP+A++K
Sbjct: 416 ETISASGLNAALAHYSPTKELHRKLSSDEMYLLDSGGQYWDGTTDITRTVHWGTPSAFQK 475
Query: 645 ECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGP 824
E +T VL G+I +S VFP T G ++++FAR ALWD GL+Y HGTGHG+G+FL VHE P
Sbjct: 476 EAYTRVLIGNIDLSRLVFPAATSGRVVEAFARKALWDVGLNYGHGTGHGIGNFLCVHEWP 535
Query: 825 CGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEP 1004
G Y + P+ GM + EPGYY+DG FGIR+E+V LVV KTKY LTFE
Sbjct: 536 VGFQY---GNIPMAEGMFTSIEPGYYQDGEFGIRLEDVALVVEAKTKYPGT---YLTFEV 589
Query: 1005 LTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
++LVP K+IDV L+ ++ +L+ Y+ R+ +G ELQ++G E L WL R T+P+S
Sbjct: 590 VSLVPYDRKLIDVSLLSPEQLQYLNRYYQAIREKVGPELQRRGLLEELSWLQRHTEPLS 648
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 34,818,783
Number of extensions: 1057415
Number of successful extensions: 3077
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3073
Number of HSP's successfully gapped: 2
Length of query: 418
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 316
Effective length of database: 8,804,438
Effective search space: 2782202408
Effective search space used: 2782202408
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008987
(1255 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_573479.2| xaa-Pro aminopeptidase 1 [Mus musculus]. 780 0.0
Alignment gi|NP_573476.2| X-prolyl aminopeptidase (aminopeptidase P) 2, m... 311 9e-85
>ref|NP_573479.2| xaa-Pro aminopeptidase 1 [Mus musculus].
Length = 623
Score = 780 bits (2013), Expect = 0.0
Identities = 375/396 (94%), Positives = 388/396 (97%)
Frame = +3
Query: 3 IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
+GLETIMLFIDGDR+D P VK+HLL DLGLEAEYRIQVLPYKSILSELK LCA LSPREK
Sbjct: 228 VGLETIMLFIDGDRVDAPGVKQHLLLDLGLEAEYRIQVLPYKSILSELKALCADLSPREK 287
Query: 183 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAES+GMRRAHIKDAVALCELFNW
Sbjct: 288 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNW 347
Query: 363 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
LE+EVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 348 LEQEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 407
Query: 543 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 408 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 467
Query: 723 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 468 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 527
Query: 903 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
EDGAFGIRIENVVLVVP KTKYNFNNRGSLTFEPLTLVPIQTKMIDV++LTDKECDWL++
Sbjct: 528 EDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVNALTDKECDWLNS 587
Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
YH TCRDV+GKELQ QGRQEALEWLIRET+P+S+QH
Sbjct: 588 YHQTCRDVVGKELQSQGRQEALEWLIRETEPVSRQH 623
>ref|NP_573476.2| X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound isoform
1 [Mus musculus].
Length = 674
Score = 311 bits (796), Expect = 9e-85
Identities = 156/326 (47%), Positives = 216/326 (66%)
Frame = +3
Query: 204 SYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPK 383
+Y V E IPK+ Y+P+ + KAVKNS E ++ +H++DAVA+ + WLEK VPK
Sbjct: 330 TYGVYEVIPKEKLVTDTYSPVMLIKAVKNSKEQALLKSSHVRDAVAVIQYLVWLEKNVPK 389
Query: 384 GGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLI 563
G V E S A+ +E RR + SF TIS++G N A+ HY+P E +R LS DE+YL+
Sbjct: 390 GTVDEFSGAEYIDELRRNENFSSGPSFETISASGLNAALAHYSPTKELHRKLSSDEMYLV 449
Query: 564 DSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARS 743
DSG QY DGTTD+TRT+H+GTPTA++KE +T VL G+I +S VFP T G ++++FAR
Sbjct: 450 DSGGQYWDGTTDITRTVHWGTPTAFQKEAYTRVLMGNIDLSRLVFPAATSGRVIEAFARR 509
Query: 744 ALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGI 923
ALW+ GL+Y HGTGHG+G+FL VHE P G Y + + GM + EPGYY DG FGI
Sbjct: 510 ALWEVGLNYGHGTGHGIGNFLCVHEWPVGFQYNNIA---MAKGMFTSIEPGYYHDGEFGI 566
Query: 924 RIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRD 1103
R+E+V LVV KTKY + LTFE ++ VP +IDV L+ ++ +L+ Y+ T R+
Sbjct: 567 RLEDVALVVEAKTKYPGD---YLTFELVSFVPYDRNLIDVRLLSPEQLQYLNRYYQTIRE 623
Query: 1104 VIGKELQKQGRQEALEWLIRETQPIS 1181
+G ELQ++ E WL + T+P+S
Sbjct: 624 NVGPELQRRQLLEEFAWLEQHTEPLS 649
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 46,893,878
Number of extensions: 1395516
Number of successful extensions: 3794
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3790
Number of HSP's successfully gapped: 2
Length of query: 418
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 314
Effective length of database: 12,493,815
Effective search space: 3923057910
Effective search space used: 3923057910
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008987
(1255 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_065116.3| xaa-Pro aminopeptidase 1 isoform 1 [Homo sapien... 795 0.0
Alignment gi|NP_001161076.1| xaa-Pro aminopeptidase 1 isoform 2 [Homo sap... 734 0.0
Alignment gi|NP_003390.4| xaa-Pro aminopeptidase 2 precursor [Homo sapien... 311 1e-84
>ref|NP_065116.3| xaa-Pro aminopeptidase 1 isoform 1 [Homo sapiens].
Length = 666
Score = 795 bits (2054), Expect = 0.0
Identities = 389/396 (98%), Positives = 390/396 (98%)
Frame = +3
Query: 3 IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
IGLETIMLFIDGDRID PSVKEHLL DLGLEAEYRIQV PYKSILSELK LCA LSPREK
Sbjct: 271 IGLETIMLFIDGDRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREK 330
Query: 183 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
VWVSDKASYAVSE IPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW
Sbjct: 331 VWVSDKASYAVSETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 390
Query: 363 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 391 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 450
Query: 543 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 451 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 510
Query: 723 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 511 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 570
Query: 903 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 571 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 630
Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 631 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 666
>ref|NP_001161076.1| xaa-Pro aminopeptidase 1 isoform 2 [Homo sapiens].
Length = 642
Score = 734 bits (1896), Expect = 0.0
Identities = 365/396 (92%), Positives = 366/396 (92%)
Frame = +3
Query: 3 IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
IGLETIMLFIDGDRID PSVKEHLL DLGLEAEYRIQV PYKSILSELK LCA LSPREK
Sbjct: 271 IGLETIMLFIDGDRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREK 330
Query: 183 VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
VWVSDKASYAVSE IPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW
Sbjct: 331 VWVSDKASYAVSETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 390
Query: 363 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYA
Sbjct: 391 LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYA---------- 440
Query: 543 LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
DGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 441 --------------DGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 486
Query: 723 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 487 LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 546
Query: 903 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 547 EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 606
Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 607 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 642
>ref|NP_003390.4| xaa-Pro aminopeptidase 2 precursor [Homo sapiens].
Length = 674
Score = 311 bits (796), Expect = 1e-84
Identities = 156/336 (46%), Positives = 222/336 (66%), Gaps = 2/336 (0%)
Frame = +3
Query: 180 KVWVSDKAS-YAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELF 356
++W+ + Y + E IPK+ Y+P+ + KAVKNS E ++ +H++DAVA+
Sbjct: 321 RIWIGTSYTMYGIYEMIPKEKLVTDTYSPVMMTKAVKNSKEQALLKASHVRDAVAVIRYL 380
Query: 357 NWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRT 536
WLEK VPKG V E S A+ ++FR ++ SF TIS++G N A+ HY+P E NR
Sbjct: 381 VWLEKNVPKGTVDEFSGAEIVDKFRGEEQFSSGPSFETISASGLNAALAHYSPTKELNRK 440
Query: 537 LSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKG 716
LS DE+YL+DSG QY DGTTD+TRT+H+GTP+A++KE +T VL G+I +S +FP T G
Sbjct: 441 LSSDEMYLLDSGGQYWDGTTDITRTVHWGTPSAFQKEAYTRVLIGNIDLSRLIFPAATSG 500
Query: 717 HLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPG 896
++++FAR ALWD+GL+Y HGTGHG+G+FL VHE P G + + GM + EPG
Sbjct: 501 RMVEAFARRALWDAGLNYGHGTGHGIGNFLCVHEWPVGFQSNNIA---MAKGMFTSIEPG 557
Query: 897 YYEDGAFGIRIENVVLVVPVKTKYNFNNRGS-LTFEPLTLVPIQTKMIDVDSLTDKECDW 1073
YY+DG FGIR+E+V LVV KTKY GS LTFE ++ VP +IDV L+ + +
Sbjct: 558 YYKDGEFGIRLEDVALVVEAKTKY----PGSYLTFEVVSFVPYDRNLIDVSLLSPEHLQY 613
Query: 1074 LHNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
L+ Y+ T R+ +G ELQ++ E EWL + T+P++
Sbjct: 614 LNRYYQTIREKVGPELQRRQLLEEFEWLQQHTEPLA 649
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 55,339,567
Number of extensions: 1665593
Number of successful extensions: 4340
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4330
Number of HSP's successfully gapped: 3
Length of query: 418
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 313
Effective length of database: 14,835,944
Effective search space: 4643650472
Effective search space used: 4643650472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008987
(1255 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 420 e-115
>Sscrofa_Chr14
|| Length = 153851969
Score = 420 bits (212), Expect = e-115
Identities = 212/212 (100%)
Strand = Plus / Minus
Query: 23 gctcttcattgacggtgaccgcatagacacccccagtgttaaggaacacctgctttttga 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131124494 gctcttcattgacggtgaccgcatagacacccccagtgttaaggaacacctgctttttga 131124435
Query: 83 cttgggcctggaagccgaatacagaatccaggtgcttccctacaagtccatcctgagcga 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131124434 cttgggcctggaagccgaatacagaatccaggtgcttccctacaagtccatcctgagcga 131124375
Query: 143 gctcaaggtcctgtgtgccagcctgtcgcctagggagaaggtgtgggtcagtgacaaggc 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131124374 gctcaaggtcctgtgtgccagcctgtcgcctagggagaaggtgtgggtcagtgacaaggc 131124315
Query: 203 cagctatgccgtgagcgaggccatccccaagg 234
||||||||||||||||||||||||||||||||
Sbjct: 131124314 cagctatgccgtgagcgaggccatccccaagg 131124283
Score = 341 bits (172), Expect = 6e-91
Identities = 175/176 (99%)
Strand = Plus / Minus
Query: 713 aggccaccttctggactcctttgcccgctctgctttgtgggattctggcctggattatct 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 131113982 aggccaccttctggactcctttgcccgctctgctttgtgggattctggcctggattacct 131113923
Query: 773 gcacggaacaggacacggggtcgggtcttttctgaatgttcacgagggtccttgtggcat 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131113922 gcacggaacaggacacggggtcgggtcttttctgaatgttcacgagggtccttgtggcat 131113863
Query: 833 cagttataaaacattctccgatgagcccttggaggcgggcatgattgtcaccgatg 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131113862 cagttataaaacattctccgatgagcccttggaggcgggcatgattgtcaccgatg 131113807
Score = 303 bits (153), Expect = 1e-79
Identities = 181/193 (93%)
Strand = Plus / Minus
Query: 1063 agtgtgactggcttcacaactaccatctgacctgcagggatgtaatcgggaaggaactgc 1122
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 131109479 agtgtgactggctcaacaactaccatctgacctgtagggatgtaatcgggaaggaactgc 131109420
Query: 1123 aaaaacagggccgccaggaagcgctcgagtggctcatcagagagacacagcccatctcca 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131109419 aaaaacagggccgccaggaagcgctcgagtggctcatcagagagacacagcccatctcca 131109360
Query: 1183 aacagcattaatatctccctgannnnnnnnaaaaaacgctctggggaaaggaggaagcct 1242
|||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 131109359 aacagcattaatatctccctgattttttttaaaaaacgctctggggaaaggaagaagcct 131109300
Query: 1243 ggcacacccccaa 1255
|||||||||||||
Sbjct: 131109299 ggcacacccccaa 131109287
Score = 200 bits (101), Expect = 1e-48
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 964 agtataactttaataaccggggaagcctgacctttgaacctctaactttggttcccatac 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131111857 agtataactttaataaccggggaagcctgacctttgaacctctaactttggttcccatac 131111798
Query: 1024 agaccaaaatgatagacgtggattcccttacagacaaagag 1064
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 131111797 agaccaaaatgatagacgtggattcccttacagacaaagag 131111757
Score = 182 bits (92), Expect = 3e-43
Identities = 92/92 (100%)
Strand = Plus / Minus
Query: 232 aggatcatcgctgctgtatgccttacacccccatctgcatcgccaaagctgtgaagaatt 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131122432 aggatcatcgctgctgtatgccttacacccccatctgcatcgccaaagctgtgaagaatt 131122373
Query: 292 ctgccgaatcagaaggcatgaggcgagctcat 323
||||||||||||||||||||||||||||||||
Sbjct: 131122372 ctgccgaatcagaaggcatgaggcgagctcat 131122341
Score = 163 bits (82), Expect = 3e-37
Identities = 82/82 (100%)
Strand = Plus / Minus
Query: 431 caggcagcaggctgactttgtggacctgagcttcccaacaatttccagtacgggacccaa 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131120049 caggcagcaggctgactttgtggacctgagcttcccaacaatttccagtacgggacccaa 131119990
Query: 491 cggcgccatcattcactacgcg 512
||||||||||||||||||||||
Sbjct: 131119989 cggcgccatcattcactacgcg 131119968
Score = 155 bits (78), Expect = 7e-35
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 888 gagccagggtattacgaagatggggcttttggaattcgcattgagaatgttgtcctggtg 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131113065 gagccagggtattacgaagatggggcttttggaattcgcattgagaatgttgtcctggtg 131113006
Query: 948 gttcctgtgaagaccaag 965
||||||||||||||||||
Sbjct: 131113005 gttcctgtgaagaccaag 131112988
Score = 145 bits (73), Expect = 7e-32
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 643 aggaatgcttcacatatgtcctcaagggccacatagctgtgagcgctgccgttttcccga 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131114880 aggaatgcttcacatatgtcctcaagggccacatagctgtgagcgctgccgttttcccga 131114821
Query: 703 ccgggaccaaagg 715
|||||||||||||
Sbjct: 131114820 ccgggaccaaagg 131114808
Score = 145 bits (73), Expect = 7e-32
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 512 gccagtccctgagacgaataggaccttgtcgctggatgaggtgtacctcattgactcggg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131118135 gccagtccctgagacgaataggaccttgtcgctggatgaggtgtacctcattgactcggg 131118076
Query: 572 tgcacagtacaag 584
|||||||||||||
Sbjct: 131118075 tgcacagtacaag 131118063
Score = 123 bits (62), Expect = 2e-25
Identities = 62/62 (100%)
Strand = Plus / Minus
Query: 584 ggatggaacaacagatgtgactcgtaccatgcattttggaacccctacggcatatgagaa 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131116406 ggatggaacaacagatgtgactcgtaccatgcattttggaacccctacggcatatgagaa 131116347
Query: 644 gg 645
||
Sbjct: 131116346 gg 131116345
Score = 123 bits (62), Expect = 2e-25
Identities = 62/62 (100%)
Strand = Plus / Minus
Query: 373 aggtgcccaaaggcggcgtgacggagatctcagctgctgacaaagctgaggaattccgca 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131120240 aggtgcccaaaggcggcgtgacggagatctcagctgctgacaaagctgaggaattccgca 131120181
Query: 433 gg 434
||
Sbjct: 131120180 gg 131120179
Score = 105 bits (53), Expect = 6e-20
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 324 attaaagatgccgttgccctctgtgaactctttaactggctggagaaagaggt 376
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131121732 attaaagatgccgttgccctctgtgaactctttaactggctggagaaagaggt 131121680
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 33,107,673
Number of extensions: 111
Number of successful extensions: 111
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 13
Length of query: 1255
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1234
Effective length of database: 2,808,413,156
Effective search space: 3465581834504
Effective search space used: 3465581834504
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)