Animal-Genome cDNA 20110601C-008987


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008987
         (1255 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001069070.1| xaa-Pro aminopeptidase 1 [Bos taurus].            792   0.0  
Alignment   gi|NP_001192484.1| xaa-Pro aminopeptidase 2 [Bos taurus].            315   4e-86
Alignment   gi|XP_002699561.1| PREDICTED: X-prolyl aminopeptidase 2, membra...   315   4e-86

>ref|NP_001069070.1| xaa-Pro aminopeptidase 1 [Bos taurus].
          Length = 623

 Score =  792 bits (2046), Expect = 0.0
 Identities = 387/395 (97%), Positives = 392/395 (99%)
 Frame = +3

Query: 3    IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
            +GLETIMLFIDGDRID P VKEHLL DLGLEAEYRIQVLPYKSILSELK+LCASLSPREK
Sbjct: 228  LGLETIMLFIDGDRIDAPIVKEHLLLDLGLEAEYRIQVLPYKSILSELKILCASLSPREK 287

Query: 183  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
            VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW
Sbjct: 288  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 347

Query: 363  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
            LEKEVPKGGVTEISAA+KAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 348  LEKEVPKGGVTEISAANKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 407

Query: 543  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
            LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 408  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 467

Query: 723  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
            LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 468  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 527

Query: 903  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
            EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL++
Sbjct: 528  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNS 587

Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQ 1187
            YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQ
Sbjct: 588  YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQ 622


>ref|NP_001192484.1| xaa-Pro aminopeptidase 2 [Bos taurus].
          Length = 673

 Score =  315 bits (808), Expect = 4e-86
 Identities = 166/359 (46%), Positives = 230/359 (64%), Gaps = 1/359 (0%)
 Frame = +3

Query: 108  IQVLPYKSILSELKVLCASLSPREKVWVSDK-ASYAVSEAIPKDHRCCMPYTPICIAKAV 284
            +QV  Y  +   ++   A  S   KVW+     SY + E IPK+      Y+P+ + KAV
Sbjct: 299  VQVEDYGQVRDSVQ---AYTSGDVKVWIGTSYTSYGLYEVIPKEKLLEDTYSPVMVTKAV 355

Query: 285  KNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSF 464
            KNS E   +R +H++DAVA+     WLEK VP+G V E S A++ E+FR ++  F   SF
Sbjct: 356  KNSKEQTLLRASHVRDAVAVIRYLVWLEKNVPQGTVDEFSGAEQLEKFRGEEEFFSGSSF 415

Query: 465  PTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEK 644
             TIS++G N A+ HY+P  E +R LS DE+YL+DSG QY DGTTDVTRT+H+GTP+A++K
Sbjct: 416  ETISASGLNAALAHYSPTKELHRKLSSDEIYLVDSGGQYWDGTTDVTRTVHWGTPSAFQK 475

Query: 645  ECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGP 824
            E +T VL G+I +S  VFP  T G ++++FAR ALWD GL+Y HGTGHG+G+FL VHE P
Sbjct: 476  EAYTRVLIGNIDLSRLVFPAATSGRMVEAFARKALWDVGLNYGHGTGHGIGNFLCVHEWP 535

Query: 825  CGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEP 1004
             G      S+  +  GM  + EPGYY DG FGIR+E+V LVV  KTKY       LTFE 
Sbjct: 536  VGFQ---SSNIAMAKGMFTSIEPGYYLDGEFGIRLEDVALVVEAKTKYPGT---YLTFEV 589

Query: 1005 LTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
            ++LVP    +IDV  L+ ++  +L+ Y+   R+ +G ELQ++  QE   WL   T+P++
Sbjct: 590  VSLVPYDRNLIDVSLLSPEQLQYLNRYYQIIREKVGPELQRRQLQEEFSWLQWHTEPLT 648


>ref|XP_002699561.1| PREDICTED: X-prolyl aminopeptidase 2, membrane-bound-like [Bos
            taurus].
          Length = 673

 Score =  315 bits (808), Expect = 4e-86
 Identities = 166/359 (46%), Positives = 230/359 (64%), Gaps = 1/359 (0%)
 Frame = +3

Query: 108  IQVLPYKSILSELKVLCASLSPREKVWVSDK-ASYAVSEAIPKDHRCCMPYTPICIAKAV 284
            +QV  Y  +   ++   A  S   KVW+     SY + E IPK+      Y+P+ + KAV
Sbjct: 299  VQVEDYGQVRDSVQ---AYTSGDVKVWIGTSYTSYGLYEVIPKEKLLEDTYSPVMVTKAV 355

Query: 285  KNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSF 464
            KNS E   +R +H++DAVA+     WLEK VP+G V E S A++ E+FR ++  F   SF
Sbjct: 356  KNSKEQTLLRASHVRDAVAVIRYLVWLEKNVPQGTVDEFSGAEQLEKFRGEEEFFSGSSF 415

Query: 465  PTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEK 644
             TIS++G N A+ HY+P  E +R LS DE+YL+DSG QY DGTTDVTRT+H+GTP+A++K
Sbjct: 416  ETISASGLNAALAHYSPTKELHRKLSSDEIYLVDSGGQYWDGTTDVTRTVHWGTPSAFQK 475

Query: 645  ECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGP 824
            E +T VL G+I +S  VFP  T G ++++FAR ALWD GL+Y HGTGHG+G+FL VHE P
Sbjct: 476  EAYTRVLIGNIDLSRLVFPAATSGRMVEAFARKALWDVGLNYGHGTGHGIGNFLCVHEWP 535

Query: 825  CGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEP 1004
             G      S+  +  GM  + EPGYY DG FGIR+E+V LVV  KTKY       LTFE 
Sbjct: 536  VGFQ---SSNIAMAKGMFTSIEPGYYLDGEFGIRLEDVALVVEAKTKYPGT---YLTFEV 589

Query: 1005 LTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
            ++LVP    +IDV  L+ ++  +L+ Y+   R+ +G ELQ++  QE   WL   T+P++
Sbjct: 590  VSLVPYDRNLIDVSLLSPEQLQYLNRYYQIIREKVGPELQRRQLQEEFSWLQWHTEPLT 648


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 54,068,613
Number of extensions: 1646110
Number of successful extensions: 4745
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4736
Number of HSP's successfully gapped: 3
Length of query: 418
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 313
Effective length of database: 14,207,134
Effective search space: 4446832942
Effective search space used: 4446832942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008987
         (1255 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_544010.2| PREDICTED: similar to X-prolyl aminopeptidase (...   799   0.0  
Alignment   gi|XP_864026.1| PREDICTED: similar to X-prolyl aminopeptidase (...   799   0.0  
Alignment   gi|XP_864001.1| PREDICTED: similar to X-prolyl aminopeptidase (...   799   0.0  
Alignment   gi|XP_549245.2| PREDICTED: similar to Xaa-Pro aminopeptidase 2 ...   318   7e-87

>ref|XP_544010.2| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
            soluble isoform 1 [Canis familiaris].
          Length = 623

 Score =  799 bits (2064), Expect = 0.0
 Identities = 390/396 (98%), Positives = 394/396 (99%)
 Frame = +3

Query: 3    IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
            IGLETIMLFIDGDRID PSVKEHLLFDLGLEAEYRIQVLPYKSILSELK LCA+LSPREK
Sbjct: 228  IGLETIMLFIDGDRIDDPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKALCANLSPREK 287

Query: 183  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
            VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAES+GMRRAHIKDAVALCELFNW
Sbjct: 288  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNW 347

Query: 363  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
            LEKEVPKGGV+EISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 348  LEKEVPKGGVSEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 407

Query: 543  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
            LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 408  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 467

Query: 723  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
            LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 468  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 527

Query: 903  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
            EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 528  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 587

Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
            YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 588  YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 623


>ref|XP_864026.1| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
            soluble isoform 4 [Canis familiaris].
          Length = 624

 Score =  799 bits (2064), Expect = 0.0
 Identities = 390/396 (98%), Positives = 394/396 (99%)
 Frame = +3

Query: 3    IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
            IGLETIMLFIDGDRID PSVKEHLLFDLGLEAEYRIQVLPYKSILSELK LCA+LSPREK
Sbjct: 229  IGLETIMLFIDGDRIDDPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKALCANLSPREK 288

Query: 183  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
            VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAES+GMRRAHIKDAVALCELFNW
Sbjct: 289  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNW 348

Query: 363  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
            LEKEVPKGGV+EISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 349  LEKEVPKGGVSEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 408

Query: 543  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
            LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 409  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 468

Query: 723  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
            LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 469  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 528

Query: 903  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
            EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 529  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 588

Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
            YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 589  YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 624


>ref|XP_864001.1| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
            soluble isoform 3 [Canis familiaris].
          Length = 580

 Score =  799 bits (2064), Expect = 0.0
 Identities = 390/396 (98%), Positives = 394/396 (99%)
 Frame = +3

Query: 3    IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
            IGLETIMLFIDGDRID PSVKEHLLFDLGLEAEYRIQVLPYKSILSELK LCA+LSPREK
Sbjct: 185  IGLETIMLFIDGDRIDDPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKALCANLSPREK 244

Query: 183  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
            VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAES+GMRRAHIKDAVALCELFNW
Sbjct: 245  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNW 304

Query: 363  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
            LEKEVPKGGV+EISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 305  LEKEVPKGGVSEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 364

Query: 543  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
            LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 365  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 424

Query: 723  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
            LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 425  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 484

Query: 903  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
            EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 485  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 544

Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
            YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 545  YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 580


>ref|XP_549245.2| PREDICTED: similar to Xaa-Pro aminopeptidase 2 precursor (X-Pro
            aminopeptidase 2) (Membrane-bound aminopeptidase P)
            (Membrane-bound APP) (Membrane-bound AmP) (mAmP)
            (Aminoacylproline aminopeptidase) [Canis familiaris].
          Length = 890

 Score =  318 bits (815), Expect = 7e-87
 Identities = 166/390 (42%), Positives = 243/390 (62%), Gaps = 1/390 (0%)
 Frame = +3

Query: 15   TIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREKVWVS 194
            +I LF++   +D+ ++K     +        +Q+  Y  +   ++      S   K+W+ 
Sbjct: 486  SIRLFVNKSCLDSETLK---YLNSSCSGSMCVQIENYSQVRGSVQTYA---SGDVKIWIG 539

Query: 195  DK-ASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEK 371
                +Y + E IP +      Y+P+ + KAVKNS E   +R +H++DAVA+     WLEK
Sbjct: 540  TSYTTYGLYEVIPLEKLIEDTYSPVMVTKAVKNSKEQALLRASHVRDAVAVIRYLVWLEK 599

Query: 372  EVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDE 551
             VPKG V E S A+  ++FR ++      SF TIS++G N A+ HY+P  E +R LS DE
Sbjct: 600  NVPKGTVDEFSGAELLDKFRGEEDFSSGPSFETISASGLNAALAHYSPTKEQHRKLSSDE 659

Query: 552  VYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDS 731
            +YL+DSG QY DGTTD+TRT+H+GTP+A++KE +T VL G+I +S  VFP  T G +++ 
Sbjct: 660  MYLLDSGGQYWDGTTDITRTVHWGTPSAFQKEAYTRVLIGNIDLSRLVFPASTSGRMMEI 719

Query: 732  FARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDG 911
            FAR ALWD GL+Y HGTGHG+G+FL VHE P G       + P+  GM  + EPGYY+DG
Sbjct: 720  FARRALWDVGLNYGHGTGHGIGNFLCVHEWPVGFQ---SGNIPMAKGMFTSIEPGYYQDG 776

Query: 912  AFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHNYHL 1091
             FGIRIE+V +VV  KTK N   +  LTFE ++LVP    +ID+  L+ +   +L++Y+ 
Sbjct: 777  EFGIRIEDVAVVVEAKTKVNI-QKSYLTFEVVSLVPYDGNLIDISLLSSEHLQYLNHYYQ 835

Query: 1092 TCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
            T R+ +G ELQ++  QE  +WL R T+P+S
Sbjct: 836  TIREKVGPELQRRQLQEEFQWLQRHTEPLS 865


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 56,304,155
Number of extensions: 1690510
Number of successful extensions: 4489
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 4484
Number of HSP's successfully gapped: 4
Length of query: 418
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 313
Effective length of database: 15,374,224
Effective search space: 4812132112
Effective search space used: 4812132112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008987
         (1255 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003133228.2| PREDICTED: xaa-Pro aminopeptidase 1 isoform ...   644   0.0  
Alignment   gi|NP_001004048.1| xaa-Pro aminopeptidase 2 precursor [Sus scro...   329   2e-90

>ref|XP_003133228.2| PREDICTED: xaa-Pro aminopeptidase 1 isoform 2 [Sus scrofa].
          Length = 314

 Score =  644 bits (1662), Expect = 0.0
 Identities = 313/314 (99%), Positives = 314/314 (100%)
 Frame = +3

Query: 249  MPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEF 428
            MPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEF
Sbjct: 1    MPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEF 60

Query: 429  RRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTR 608
            RRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTR
Sbjct: 61   RRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTR 120

Query: 609  TMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGH 788
            TMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGH
Sbjct: 121  TMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGH 180

Query: 789  GVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKY 968
            GVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKY
Sbjct: 181  GVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKY 240

Query: 969  NFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRDVIGKELQKQGRQEAL 1148
            NFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+NYHLTCRDVIGKELQKQGRQEAL
Sbjct: 241  NFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEAL 300

Query: 1149 EWLIRETQPISKQH 1190
            EWLIRETQPISKQH
Sbjct: 301  EWLIRETQPISKQH 314


>ref|NP_001004048.1| xaa-Pro aminopeptidase 2 precursor [Sus scrofa].
          Length = 673

 Score =  329 bits (844), Expect = 2e-90
 Identities = 170/359 (47%), Positives = 234/359 (65%), Gaps = 1/359 (0%)
 Frame = +3

Query: 108  IQVLPYKSILSELKVLCASLSPREKVWVSDK-ASYAVSEAIPKDHRCCMPYTPICIAKAV 284
            +Q+  Y  I   ++   A  S   K+W+  +  SY + E IPK+      Y+P+ I KAV
Sbjct: 299  VQLEDYSQIRDSIQ---AYTSGDVKIWIGTRYTSYGLYEVIPKEKLVEDDYSPVMITKAV 355

Query: 285  KNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSF 464
            KNS E   ++ +H++DAVA+     WLEK VP G V E S A + EEFR ++  F   SF
Sbjct: 356  KNSREQALLKASHVRDAVAVIRYLAWLEKNVPTGTVDEFSGAKRVEEFRGEEEFFSGPSF 415

Query: 465  PTISSTGPNGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEK 644
             TIS++G N A+ HY+P  E +R LS DE+YL+DSG QY DGTTD+TRT+H+GTP+A++K
Sbjct: 416  ETISASGLNAALAHYSPTKELHRKLSSDEMYLLDSGGQYWDGTTDITRTVHWGTPSAFQK 475

Query: 645  ECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGP 824
            E +T VL G+I +S  VFP  T G ++++FAR ALWD GL+Y HGTGHG+G+FL VHE P
Sbjct: 476  EAYTRVLIGNIDLSRLVFPAATSGRVVEAFARKALWDVGLNYGHGTGHGIGNFLCVHEWP 535

Query: 825  CGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEP 1004
             G  Y    + P+  GM  + EPGYY+DG FGIR+E+V LVV  KTKY       LTFE 
Sbjct: 536  VGFQY---GNIPMAEGMFTSIEPGYYQDGEFGIRLEDVALVVEAKTKYPGT---YLTFEV 589

Query: 1005 LTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
            ++LVP   K+IDV  L+ ++  +L+ Y+   R+ +G ELQ++G  E L WL R T+P+S
Sbjct: 590  VSLVPYDRKLIDVSLLSPEQLQYLNRYYQAIREKVGPELQRRGLLEELSWLQRHTEPLS 648


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 34,818,783
Number of extensions: 1057415
Number of successful extensions: 3077
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3073
Number of HSP's successfully gapped: 2
Length of query: 418
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 316
Effective length of database: 8,804,438
Effective search space: 2782202408
Effective search space used: 2782202408
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008987
         (1255 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_573479.2| xaa-Pro aminopeptidase 1 [Mus musculus].             780   0.0  
Alignment   gi|NP_573476.2| X-prolyl aminopeptidase (aminopeptidase P) 2, m...   311   9e-85

>ref|NP_573479.2| xaa-Pro aminopeptidase 1 [Mus musculus].
          Length = 623

 Score =  780 bits (2013), Expect = 0.0
 Identities = 375/396 (94%), Positives = 388/396 (97%)
 Frame = +3

Query: 3    IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
            +GLETIMLFIDGDR+D P VK+HLL DLGLEAEYRIQVLPYKSILSELK LCA LSPREK
Sbjct: 228  VGLETIMLFIDGDRVDAPGVKQHLLLDLGLEAEYRIQVLPYKSILSELKALCADLSPREK 287

Query: 183  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
            VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAES+GMRRAHIKDAVALCELFNW
Sbjct: 288  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESDGMRRAHIKDAVALCELFNW 347

Query: 363  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
            LE+EVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 348  LEQEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 407

Query: 543  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
            LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 408  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 467

Query: 723  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
            LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 468  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 527

Query: 903  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
            EDGAFGIRIENVVLVVP KTKYNFNNRGSLTFEPLTLVPIQTKMIDV++LTDKECDWL++
Sbjct: 528  EDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVNALTDKECDWLNS 587

Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
            YH TCRDV+GKELQ QGRQEALEWLIRET+P+S+QH
Sbjct: 588  YHQTCRDVVGKELQSQGRQEALEWLIRETEPVSRQH 623


>ref|NP_573476.2| X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound isoform
            1 [Mus musculus].
          Length = 674

 Score =  311 bits (796), Expect = 9e-85
 Identities = 156/326 (47%), Positives = 216/326 (66%)
 Frame = +3

Query: 204  SYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPK 383
            +Y V E IPK+      Y+P+ + KAVKNS E   ++ +H++DAVA+ +   WLEK VPK
Sbjct: 330  TYGVYEVIPKEKLVTDTYSPVMLIKAVKNSKEQALLKSSHVRDAVAVIQYLVWLEKNVPK 389

Query: 384  GGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLSLDEVYLI 563
            G V E S A+  +E RR +      SF TIS++G N A+ HY+P  E +R LS DE+YL+
Sbjct: 390  GTVDEFSGAEYIDELRRNENFSSGPSFETISASGLNAALAHYSPTKELHRKLSSDEMYLV 449

Query: 564  DSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARS 743
            DSG QY DGTTD+TRT+H+GTPTA++KE +T VL G+I +S  VFP  T G ++++FAR 
Sbjct: 450  DSGGQYWDGTTDITRTVHWGTPTAFQKEAYTRVLMGNIDLSRLVFPAATSGRVIEAFARR 509

Query: 744  ALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGI 923
            ALW+ GL+Y HGTGHG+G+FL VHE P G  Y   +   +  GM  + EPGYY DG FGI
Sbjct: 510  ALWEVGLNYGHGTGHGIGNFLCVHEWPVGFQYNNIA---MAKGMFTSIEPGYYHDGEFGI 566

Query: 924  RIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHNYHLTCRD 1103
            R+E+V LVV  KTKY  +    LTFE ++ VP    +IDV  L+ ++  +L+ Y+ T R+
Sbjct: 567  RLEDVALVVEAKTKYPGD---YLTFELVSFVPYDRNLIDVRLLSPEQLQYLNRYYQTIRE 623

Query: 1104 VIGKELQKQGRQEALEWLIRETQPIS 1181
             +G ELQ++   E   WL + T+P+S
Sbjct: 624  NVGPELQRRQLLEEFAWLEQHTEPLS 649


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 46,893,878
Number of extensions: 1395516
Number of successful extensions: 3794
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3790
Number of HSP's successfully gapped: 2
Length of query: 418
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 314
Effective length of database: 12,493,815
Effective search space: 3923057910
Effective search space used: 3923057910
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008987
         (1255 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_065116.3| xaa-Pro aminopeptidase 1 isoform 1 [Homo sapien...   795   0.0  
Alignment   gi|NP_001161076.1| xaa-Pro aminopeptidase 1 isoform 2 [Homo sap...   734   0.0  
Alignment   gi|NP_003390.4| xaa-Pro aminopeptidase 2 precursor [Homo sapien...   311   1e-84

>ref|NP_065116.3| xaa-Pro aminopeptidase 1 isoform 1 [Homo sapiens].
          Length = 666

 Score =  795 bits (2054), Expect = 0.0
 Identities = 389/396 (98%), Positives = 390/396 (98%)
 Frame = +3

Query: 3    IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
            IGLETIMLFIDGDRID PSVKEHLL DLGLEAEYRIQV PYKSILSELK LCA LSPREK
Sbjct: 271  IGLETIMLFIDGDRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREK 330

Query: 183  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
            VWVSDKASYAVSE IPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW
Sbjct: 331  VWVSDKASYAVSETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 390

Query: 363  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
            LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS
Sbjct: 391  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 450

Query: 543  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
            LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 451  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 510

Query: 723  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
            LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 511  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 570

Query: 903  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
            EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 571  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 630

Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
            YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 631  YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 666


>ref|NP_001161076.1| xaa-Pro aminopeptidase 1 isoform 2 [Homo sapiens].
          Length = 642

 Score =  734 bits (1896), Expect = 0.0
 Identities = 365/396 (92%), Positives = 366/396 (92%)
 Frame = +3

Query: 3    IGLETIMLFIDGDRIDTPSVKEHLLFDLGLEAEYRIQVLPYKSILSELKVLCASLSPREK 182
            IGLETIMLFIDGDRID PSVKEHLL DLGLEAEYRIQV PYKSILSELK LCA LSPREK
Sbjct: 271  IGLETIMLFIDGDRIDAPSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCADLSPREK 330

Query: 183  VWVSDKASYAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 362
            VWVSDKASYAVSE IPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW
Sbjct: 331  VWVSDKASYAVSETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNW 390

Query: 363  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRTLS 542
            LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYA          
Sbjct: 391  LEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYA---------- 440

Query: 543  LDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 722
                          DGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL
Sbjct: 441  --------------DGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHL 486

Query: 723  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 902
            LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY
Sbjct: 487  LDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYY 546

Query: 903  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLHN 1082
            EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWL+N
Sbjct: 547  EDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNN 606

Query: 1083 YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 1190
            YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH
Sbjct: 607  YHLTCRDVIGKELQKQGRQEALEWLIRETQPISKQH 642


>ref|NP_003390.4| xaa-Pro aminopeptidase 2 precursor [Homo sapiens].
          Length = 674

 Score =  311 bits (796), Expect = 1e-84
 Identities = 156/336 (46%), Positives = 222/336 (66%), Gaps = 2/336 (0%)
 Frame = +3

Query: 180  KVWVSDKAS-YAVSEAIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELF 356
            ++W+    + Y + E IPK+      Y+P+ + KAVKNS E   ++ +H++DAVA+    
Sbjct: 321  RIWIGTSYTMYGIYEMIPKEKLVTDTYSPVMMTKAVKNSKEQALLKASHVRDAVAVIRYL 380

Query: 357  NWLEKEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETNRT 536
             WLEK VPKG V E S A+  ++FR ++      SF TIS++G N A+ HY+P  E NR 
Sbjct: 381  VWLEKNVPKGTVDEFSGAEIVDKFRGEEQFSSGPSFETISASGLNAALAHYSPTKELNRK 440

Query: 537  LSLDEVYLIDSGAQYKDGTTDVTRTMHFGTPTAYEKECFTYVLKGHIAVSAAVFPTGTKG 716
            LS DE+YL+DSG QY DGTTD+TRT+H+GTP+A++KE +T VL G+I +S  +FP  T G
Sbjct: 441  LSSDEMYLLDSGGQYWDGTTDITRTVHWGTPSAFQKEAYTRVLIGNIDLSRLIFPAATSG 500

Query: 717  HLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPG 896
             ++++FAR ALWD+GL+Y HGTGHG+G+FL VHE P G      +   +  GM  + EPG
Sbjct: 501  RMVEAFARRALWDAGLNYGHGTGHGIGNFLCVHEWPVGFQSNNIA---MAKGMFTSIEPG 557

Query: 897  YYEDGAFGIRIENVVLVVPVKTKYNFNNRGS-LTFEPLTLVPIQTKMIDVDSLTDKECDW 1073
            YY+DG FGIR+E+V LVV  KTKY     GS LTFE ++ VP    +IDV  L+ +   +
Sbjct: 558  YYKDGEFGIRLEDVALVVEAKTKY----PGSYLTFEVVSFVPYDRNLIDVSLLSPEHLQY 613

Query: 1074 LHNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 1181
            L+ Y+ T R+ +G ELQ++   E  EWL + T+P++
Sbjct: 614  LNRYYQTIREKVGPELQRRQLLEEFEWLQQHTEPLA 649


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 55,339,567
Number of extensions: 1665593
Number of successful extensions: 4340
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4330
Number of HSP's successfully gapped: 3
Length of query: 418
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 313
Effective length of database: 14,835,944
Effective search space: 4643650472
Effective search space used: 4643650472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008987
         (1255 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr14                                                         420   e-115

>Sscrofa_Chr14 
||          Length = 153851969

 Score =  420 bits (212), Expect = e-115
 Identities = 212/212 (100%)
 Strand = Plus / Minus

                                                                             
Query: 23        gctcttcattgacggtgaccgcatagacacccccagtgttaaggaacacctgctttttga 82
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131124494 gctcttcattgacggtgaccgcatagacacccccagtgttaaggaacacctgctttttga 131124435

                                                                             
Query: 83        cttgggcctggaagccgaatacagaatccaggtgcttccctacaagtccatcctgagcga 142
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131124434 cttgggcctggaagccgaatacagaatccaggtgcttccctacaagtccatcctgagcga 131124375

                                                                             
Query: 143       gctcaaggtcctgtgtgccagcctgtcgcctagggagaaggtgtgggtcagtgacaaggc 202
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131124374 gctcaaggtcctgtgtgccagcctgtcgcctagggagaaggtgtgggtcagtgacaaggc 131124315

                                                 
Query: 203       cagctatgccgtgagcgaggccatccccaagg 234
                 ||||||||||||||||||||||||||||||||
Sbjct: 131124314 cagctatgccgtgagcgaggccatccccaagg 131124283



 Score =  341 bits (172), Expect = 6e-91
 Identities = 175/176 (99%)
 Strand = Plus / Minus

                                                                             
Query: 713       aggccaccttctggactcctttgcccgctctgctttgtgggattctggcctggattatct 772
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 131113982 aggccaccttctggactcctttgcccgctctgctttgtgggattctggcctggattacct 131113923

                                                                             
Query: 773       gcacggaacaggacacggggtcgggtcttttctgaatgttcacgagggtccttgtggcat 832
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131113922 gcacggaacaggacacggggtcgggtcttttctgaatgttcacgagggtccttgtggcat 131113863

                                                                         
Query: 833       cagttataaaacattctccgatgagcccttggaggcgggcatgattgtcaccgatg 888
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131113862 cagttataaaacattctccgatgagcccttggaggcgggcatgattgtcaccgatg 131113807



 Score =  303 bits (153), Expect = 1e-79
 Identities = 181/193 (93%)
 Strand = Plus / Minus

                                                                             
Query: 1063      agtgtgactggcttcacaactaccatctgacctgcagggatgtaatcgggaaggaactgc 1122
                 |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 131109479 agtgtgactggctcaacaactaccatctgacctgtagggatgtaatcgggaaggaactgc 131109420

                                                                             
Query: 1123      aaaaacagggccgccaggaagcgctcgagtggctcatcagagagacacagcccatctcca 1182
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131109419 aaaaacagggccgccaggaagcgctcgagtggctcatcagagagacacagcccatctcca 131109360

                                                                             
Query: 1183      aacagcattaatatctccctgannnnnnnnaaaaaacgctctggggaaaggaggaagcct 1242
                 ||||||||||||||||||||||        |||||||||||||||||||||| |||||||
Sbjct: 131109359 aacagcattaatatctccctgattttttttaaaaaacgctctggggaaaggaagaagcct 131109300

                              
Query: 1243      ggcacacccccaa 1255
                 |||||||||||||
Sbjct: 131109299 ggcacacccccaa 131109287



 Score =  200 bits (101), Expect = 1e-48
 Identities = 101/101 (100%)
 Strand = Plus / Minus

                                                                             
Query: 964       agtataactttaataaccggggaagcctgacctttgaacctctaactttggttcccatac 1023
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131111857 agtataactttaataaccggggaagcctgacctttgaacctctaactttggttcccatac 131111798

                                                          
Query: 1024      agaccaaaatgatagacgtggattcccttacagacaaagag 1064
                 |||||||||||||||||||||||||||||||||||||||||
Sbjct: 131111797 agaccaaaatgatagacgtggattcccttacagacaaagag 131111757



 Score =  182 bits (92), Expect = 3e-43
 Identities = 92/92 (100%)
 Strand = Plus / Minus

                                                                             
Query: 232       aggatcatcgctgctgtatgccttacacccccatctgcatcgccaaagctgtgaagaatt 291
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131122432 aggatcatcgctgctgtatgccttacacccccatctgcatcgccaaagctgtgaagaatt 131122373

                                                 
Query: 292       ctgccgaatcagaaggcatgaggcgagctcat 323
                 ||||||||||||||||||||||||||||||||
Sbjct: 131122372 ctgccgaatcagaaggcatgaggcgagctcat 131122341



 Score =  163 bits (82), Expect = 3e-37
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                             
Query: 431       caggcagcaggctgactttgtggacctgagcttcccaacaatttccagtacgggacccaa 490
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131120049 caggcagcaggctgactttgtggacctgagcttcccaacaatttccagtacgggacccaa 131119990

                                       
Query: 491       cggcgccatcattcactacgcg 512
                 ||||||||||||||||||||||
Sbjct: 131119989 cggcgccatcattcactacgcg 131119968



 Score =  155 bits (78), Expect = 7e-35
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                             
Query: 888       gagccagggtattacgaagatggggcttttggaattcgcattgagaatgttgtcctggtg 947
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131113065 gagccagggtattacgaagatggggcttttggaattcgcattgagaatgttgtcctggtg 131113006

                                   
Query: 948       gttcctgtgaagaccaag 965
                 ||||||||||||||||||
Sbjct: 131113005 gttcctgtgaagaccaag 131112988



 Score =  145 bits (73), Expect = 7e-32
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                             
Query: 643       aggaatgcttcacatatgtcctcaagggccacatagctgtgagcgctgccgttttcccga 702
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131114880 aggaatgcttcacatatgtcctcaagggccacatagctgtgagcgctgccgttttcccga 131114821

                              
Query: 703       ccgggaccaaagg 715
                 |||||||||||||
Sbjct: 131114820 ccgggaccaaagg 131114808



 Score =  145 bits (73), Expect = 7e-32
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                             
Query: 512       gccagtccctgagacgaataggaccttgtcgctggatgaggtgtacctcattgactcggg 571
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131118135 gccagtccctgagacgaataggaccttgtcgctggatgaggtgtacctcattgactcggg 131118076

                              
Query: 572       tgcacagtacaag 584
                 |||||||||||||
Sbjct: 131118075 tgcacagtacaag 131118063



 Score =  123 bits (62), Expect = 2e-25
 Identities = 62/62 (100%)
 Strand = Plus / Minus

                                                                             
Query: 584       ggatggaacaacagatgtgactcgtaccatgcattttggaacccctacggcatatgagaa 643
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131116406 ggatggaacaacagatgtgactcgtaccatgcattttggaacccctacggcatatgagaa 131116347

                   
Query: 644       gg 645
                 ||
Sbjct: 131116346 gg 131116345



 Score =  123 bits (62), Expect = 2e-25
 Identities = 62/62 (100%)
 Strand = Plus / Minus

                                                                             
Query: 373       aggtgcccaaaggcggcgtgacggagatctcagctgctgacaaagctgaggaattccgca 432
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131120240 aggtgcccaaaggcggcgtgacggagatctcagctgctgacaaagctgaggaattccgca 131120181

                   
Query: 433       gg 434
                 ||
Sbjct: 131120180 gg 131120179



 Score =  105 bits (53), Expect = 6e-20
 Identities = 53/53 (100%)
 Strand = Plus / Minus

                                                                      
Query: 324       attaaagatgccgttgccctctgtgaactctttaactggctggagaaagaggt 376
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131121732 attaaagatgccgttgccctctgtgaactctttaactggctggagaaagaggt 131121680


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 33,107,673
Number of extensions: 111
Number of successful extensions: 111
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 13
Length of query: 1255
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1234
Effective length of database: 2,808,413,156
Effective search space: 3465581834504
Effective search space used: 3465581834504
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)