Animal-Genome cDNA 20110601C-008999

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008999
         (1255 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001033649.1| POC1 centriolar protein homolog A [Bos tauru...   588   e-168
Alignment   gi|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus].    405   e-113
Alignment   gi|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partia...   405   e-113
Alignment   gi|NP_001069398.1| WD repeat-containing protein 69 [Bos taurus].     151   1e-36
Alignment   gi|XP_001788325.2| PREDICTED: WD repeat domain 5 [Bos taurus].       151   1e-36
Alignment   gi|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus].      148   1e-35
Alignment   gi|NP_777088.1| platelet-activating factor acetylhydrolase IB s...   147   3e-35
Alignment   gi|NP_001095379.1| katanin p80 WD40-containing subunit B1 [Bos ...   127   2e-29
Alignment   gi|NP_001069717.1| F-box/WD repeat-containing protein 7 [Bos ta...   126   5e-29
Alignment   gi|NP_001039847.1| U5 small nuclear ribonucleoprotein 40 kDa pr...   124   2e-28

>ref|NP_001033649.1| POC1 centriolar protein homolog A [Bos taurus].
          Length = 407

 Score =  588 bits (1517), Expect = e-168
 Identities = 281/292 (96%), Positives = 285/292 (97%)
 Frame = +1

Query: 379  PEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 558
            PEDPSLERHFKGHRDAVT VDFS N KQLASGSMDSCLMVWHMKPQ+RAYRF GHKDAVT
Sbjct: 6    PEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVT 65

Query: 559  CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 738
            CVNFSPSGHLLASGSRDKTVRIWVPN+KGESTVFRAHTATVRSVHFCSDGQSFVTASDDK
Sbjct: 66   CVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 125

Query: 739  TIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 918
            T+KVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE
Sbjct: 126  TVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 185

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            HGGFVTYVDFHPSGTC+AAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV
Sbjct: 186  HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TASSDSTLKILDLMEGRLLYTLHGHQGPATT  FSRTGEYFAS GSDEQVMV
Sbjct: 246  TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus].
          Length = 478

 Score =  405 bits (1042), Expect = e-113
 Identities = 181/292 (61%), Positives = 242/292 (82%)
 Frame = +1

Query: 379  PEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 558
            PEDP LER+FKGH+ A+T VDFS N KQLA+GS D+ LM+W ++PQ+RA+R+ GHKD +T
Sbjct: 5    PEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVIT 64

Query: 559  CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 738
             V FSP G+LLAS SRD+T+R+W+P+ +G+S+ F+AHTA VRSV F +DGQ   +AS+DK
Sbjct: 65   SVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDK 124

Query: 739  TIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 918
            +IKVW+ +RQ+FL+SL +H +WVRCAKFSPDGRLIVS S+DKT+K+WD T+++CV+++ +
Sbjct: 125  SIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
              GF  +V F+P+GTC+A+AG D+TVK+WD+R ++LLQHYQ+HS  VN +SFHPSGNYL+
Sbjct: 185  FVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLI 244

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TASSD TLKILDL+EGRL+YTL GH GP  T  FS+ GE F S G+D QV++
Sbjct: 245  TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLL 296



 Score =  117 bits (292), Expect = 3e-26
 Identities = 68/209 (32%), Positives = 90/209 (43%)
 Frame = +1

Query: 379  PEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 558
            P+       FK H   V  VDFS + + LAS S D  + VW+M  Q   Y    H   V 
Sbjct: 89   PDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVR 148

Query: 559  CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 738
            C  FSP G L+ S S DKT++IW    K     F         V F  +G    +A  D 
Sbjct: 149  CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDH 208

Query: 739  TIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 918
            T+K+W     K L     H   V C  F P G  +++AS D T+K+ D      +++   
Sbjct: 209  TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVW 1005
            H G V  V F   G    + G D  V +W
Sbjct: 269  HTGPVFTVSFSKGGELFTSGGADAQVLLW 297



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
 Frame = +1

Query: 436 VDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKT 615
           V F+ N   +AS   D  + +W ++       +  H   V CV+F PSG+ L + S D T
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 251

Query: 616 VRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 762
           ++I +  ++G      + HT  V +V F   G+ F +   D  + +W T+
Sbjct: 252 LKI-LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTN 300


>ref|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partial [Bos taurus].
          Length = 371

 Score =  405 bits (1042), Expect = e-113
 Identities = 181/292 (61%), Positives = 242/292 (82%)
 Frame = +1

Query: 379  PEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 558
            PEDP LER+FKGH+ A+T VDFS N KQLA+GS D+ LM+W ++PQ+RA+R+ GHKD +T
Sbjct: 5    PEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVIT 64

Query: 559  CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 738
             V FSP G+LLAS SRD+T+R+W+P+ +G+S+ F+AHTA VRSV F +DGQ   +AS+DK
Sbjct: 65   SVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDK 124

Query: 739  TIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 918
            +IKVW+ +RQ+FL+SL +H +WVRCAKFSPDGRLIVS S+DKT+K+WD T+++CV+++ +
Sbjct: 125  SIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
              GF  +V F+P+GTC+A+AG D+TVK+WD+R ++LLQHYQ+HS  VN +SFHPSGNYL+
Sbjct: 185  FVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLI 244

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TASSD TLKILDL+EGRL+YTL GH GP  T  FS+ GE F S G+D QV++
Sbjct: 245  TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLL 296



 Score =  117 bits (292), Expect = 3e-26
 Identities = 68/209 (32%), Positives = 90/209 (43%)
 Frame = +1

Query: 379  PEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 558
            P+       FK H   V  VDFS + + LAS S D  + VW+M  Q   Y    H   V 
Sbjct: 89   PDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVR 148

Query: 559  CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 738
            C  FSP G L+ S S DKT++IW    K     F         V F  +G    +A  D 
Sbjct: 149  CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDH 208

Query: 739  TIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 918
            T+K+W     K L     H   V C  F P G  +++AS D T+K+ D      +++   
Sbjct: 209  TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVW 1005
            H G V  V F   G    + G D  V +W
Sbjct: 269  HTGPVFTVSFSKGGELFTSGGADAQVLLW 297



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
 Frame = +1

Query: 436 VDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKT 615
           V F+ N   +AS   D  + +W ++       +  H   V CV+F PSG+ L + S D T
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 251

Query: 616 VRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 762
           ++I +  ++G      + HT  V +V F   G+ F +   D  + +W T+
Sbjct: 252 LKI-LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTN 300


>ref|NP_001069398.1| WD repeat-containing protein 69 [Bos taurus].
          Length = 415

 Score =  151 bits (382), Expect = 1e-36
 Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 1/278 (0%)
 Frame = +1

Query: 409  KGHRDAVTCVDFSFNM-KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            +GHR+ V  + F+     ++A+GS D    +W ++     + F GH   + C++F+P   
Sbjct: 131  EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST 190

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            L+A+GS D T ++W      E      H+A + S+ F + G   +T S D T+ VW    
Sbjct: 191  LVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT 250

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + +++L  H   +  A F+ D  LI++ S DKT KLWD  + +CV +   H   +    
Sbjct: 251  GRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSC 310

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F  +G  +A A  D T +++   T   +   + H   ++ +SF+P GN L+T SSD T +
Sbjct: 311  FDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTAR 370

Query: 1126 ILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSD 1239
            I D   G+ L  L GH     +  F+  G+   +   D
Sbjct: 371  IWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKD 408



 Score =  138 bits (348), Expect = 9e-33
 Identities = 70/241 (29%), Positives = 126/241 (52%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            F+GH   + C+ F+     +A+GSMD+   +W ++     +  TGH   +  ++F+ SG+
Sbjct: 173  FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGN 232

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
             + +GS D TV +W  +   +      H A + S  F  D    +T S DKT K+W    
Sbjct: 233  RIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVN 292

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             K + +L+ H + +  + F   G+LI +AS D T +++   +RECV     H G ++ + 
Sbjct: 293  GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKIS 352

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F+P G  +     D T ++WD +T + LQ  + H+  + + +F+  G+ ++T S D+T +
Sbjct: 353  FNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCR 412

Query: 1126 I 1128
            I
Sbjct: 413  I 413



 Score =  117 bits (294), Expect = 2e-26
 Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
 Frame = +1

Query: 655  VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF-SPD 831
            V RAH   + +V     G  F+T S D+T K+W T   + L +L  H N V    F +P 
Sbjct: 87   VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPY 146

Query: 832  GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV 1011
            G  I + S DKT KLW   + +C H++  H   +  + F+P  T VA   MD T K+WD+
Sbjct: 147  GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206

Query: 1012 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
            ++   +     HSA + +LSF+ SGN ++T S D T+ + +   GR +YTL GH
Sbjct: 207  QSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGH 260



 Score =  113 bits (283), Expect = 3e-25
 Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 1/230 (0%)
 Frame = +1

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD-GQSFVTAS 729
            +T V  + SG    +GS D+T ++W      E      H   V ++ F +  G    T S
Sbjct: 95   LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS 154

Query: 730  DDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 909
             DKT K+WS    K   +   H   + C  F+P   L+ + S D T KLWD  S E V +
Sbjct: 155  FDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFT 214

Query: 910  YCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN 1089
               H   +  + F+ SG  +     D+TV VW+  T R +     H A +++  F+   +
Sbjct: 215  LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCS 274

Query: 1090 YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSD 1239
             ++T S D T K+ D + G+ + TL GH        F  TG+  A+  +D
Sbjct: 275  LILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324



 Score =  108 bits (270), Expect = 1e-23
 Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 1/263 (0%)
 Frame = +1

Query: 469  SGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNIKG 645
            +GS D    +W        +   GH++ V  + F+ P G  +A+GS DKT ++W      
Sbjct: 109  TGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGK 168

Query: 646  ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFS 825
                FR HTA +  + F        T S D T K+W     + +F+L+ H   +    F+
Sbjct: 169  CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFN 228

Query: 826  PDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 1005
              G  I++ S D TV +W+  +   V++   H   ++   F+   + +    MD T K+W
Sbjct: 229  TSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLW 288

Query: 1006 DVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPA 1185
            D    + +     H   +    F  +G  + TAS+D T +I        +  L GH+G  
Sbjct: 289  DAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEI 348

Query: 1186 TTRGFSRTGEYFASEGSDEQVMV 1254
            +   F+  G    +  SD+   +
Sbjct: 349  SKISFNPQGNRLLTGSSDKTARI 371



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
 Frame = +1

Query: 754  STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 933
            S H+      L  HI  +     +  G   ++ S D+T KLWD  S E +H+   H   V
Sbjct: 78   SNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVV 137

Query: 934  TYVDF-HPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 1110
              + F +P G  +A    D T K+W V T +    ++ H+A +  LSF+P    + T S 
Sbjct: 138  YAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSM 197

Query: 1111 DSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            D+T K+ D+  G  ++TL GH     +  F+ +G    +   D  V V
Sbjct: 198  DTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV 245



 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 41/156 (26%), Positives = 69/156 (44%)
 Frame = +1

Query: 412 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
           GH   ++   F+++   + +GSMD    +W           TGH D +    F  +G L+
Sbjct: 259 GHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLI 318

Query: 592 ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
           A+ S D T RI+    +   T    H   +  + F   G   +T S DKT ++W     +
Sbjct: 319 ATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQ 378

Query: 772 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
            L  L  H + +    F+  G +I++ S D T ++W
Sbjct: 379 CLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414


>ref|XP_001788325.2| PREDICTED: WD repeat domain 5 [Bos taurus].
          Length = 330

 Score =  151 bits (382), Expect = 1e-36
 Identities = 84/248 (33%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
 Frame = +1

Query: 523  AYRFT--GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHF 696
            A +FT  GH +AV+ V FSP+G  LAS S DK + IW           + H   +  V +
Sbjct: 32   ALKFTLEGHTEAVSSVKFSPNGEWLASSSADKVIIIWGAYDGKYEKTLKGHNLEISDVAW 91

Query: 697  CSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 876
             SD    V+ASDDKT+K+W     K L +L  H N+V C  F+P   LI+S S D++VK+
Sbjct: 92   SSDSSRLVSASDDKTLKIWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDESVKI 151

Query: 877  WDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH-YQLHSA 1053
            W+  + +C+ +   H   V+ V F+ SG+ + +   D   ++WD  + + L+      + 
Sbjct: 152  WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGVCRIWDAASGQCLKALVDDDNP 211

Query: 1054 AVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFAS 1227
             V+ + F P+G Y++ A+ D+TLK+ D   GR L T  GH+         FS TG  +  
Sbjct: 212  PVSFVKFSPNGKYILIATLDNTLKLWDYSRGRCLKTYTGHKNEKYCVFASFSVTGGKWIV 271

Query: 1228 EGSDEQVM 1251
             GS++ ++
Sbjct: 272  SGSEDNLV 279



 Score =  129 bits (323), Expect = 7e-30
 Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+  KGH   ++ V +S +  +L S S D  L +W ++         GH + V C 
Sbjct: 72   DGKYEKTLKGHNLEISDVAWSSDSSRLVSASDDKTLKIWDVRSGKCLKTLKGHSNYVFCC 131

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            NF+P  +L+ SGS D++V+IW            AH+  V +VHF   G   V+ S D   
Sbjct: 132  NFNPPSNLIISGSFDESVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGVC 191

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W     + L +L    N  V   KFSP+G+ I+ A+ D T+KLWD +   C+ +Y  H
Sbjct: 192  RIWDAASGQCLKALVDDDNPPVSFVKFSPNGKYILIATLDNTLKLWDYSRGRCLKTYTGH 251

Query: 922  GG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  +  F    G  + +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 252  KNEKYCVFASFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENI 311

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 312  IASAALGNDKTVKL 325



 Score =  125 bits (314), Expect = 8e-29
 Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 8/300 (2%)
 Frame = +1

Query: 373  PYPEDPSLERHF--KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHK 546
            P  E P+    F  +GH +AV+ V FS N + LAS S D  +++W            GH 
Sbjct: 24   PVSEKPNYALKFTLEGHTEAVSSVKFSPNGEWLASSSADKVIIIWGAYDGKYEKTLKGHN 83

Query: 547  DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 726
              ++ V +S     L S S DKT++IW           + H+  V   +F       ++ 
Sbjct: 84   LEISDVAWSSDSSRLVSASDDKTLKIWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISG 143

Query: 727  SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 906
            S D+++K+W     K L +LS H + V    F+  G LIVS S D   ++WD  S +C+ 
Sbjct: 144  SFDESVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGVCRIWDAASGQCLK 203

Query: 907  SYCEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLH---SAAVNALSF 1074
            +  +     V++V F P+G  +  A +DNT+K+WD    R L+ Y  H      V A   
Sbjct: 204  ALVDDDNPPVSFVKFSPNGKYILIATLDNTLKLWDYSRGRCLKTYTGHKNEKYCVFASFS 263

Query: 1075 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASE--GSDEQV 1248
               G ++V+ S D+ + I +L    ++  L GH     +     T    AS   G+D+ V
Sbjct: 264  VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENIIASAALGNDKTV 323



 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 49/209 (23%)
 Frame = +1

Query: 409 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 588
           KGH + V C +F+     + SGS D  + +W +K        + H D V+ V+F+ SG L
Sbjct: 122 KGHSNYVFCCNFNPPSNLIISGSFDESVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSL 181

Query: 589 LASGSRDKTVRIWVPNIKGE--STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 762
           + SGS D   RIW     G+    +       V  V F  +G+  + A+ D T+K+W   
Sbjct: 182 IVSGSYDGVCRIW-DAASGQCLKALVDDDNPPVSFVKFSPNGKYILIATLDNTLKLWDYS 240

Query: 763 RQKFLFSLSQHINWVRC--AKFS-PDGRLIVSASDD------------------------ 861
           R + L + + H N   C  A FS   G+ IVS S+D                        
Sbjct: 241 RGRCLKTYTGHKNEKYCVFASFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 300

Query: 862 --------------------KTVKLWDKT 888
                               KTVKLW  T
Sbjct: 301 ISAACHPTENIIASAALGNDKTVKLWTST 329



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 31/112 (27%), Positives = 53/112 (47%)
 Frame = +1

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            H   V+ V F P+G  +A++  D  + +W     +  +  + H+  ++ +++    + LV
Sbjct: 40   HTEAVSSVKFSPNGEWLASSSADKVIIIWGAYDGKYEKTLKGHNLEISDVAWSSDSSRLV 99

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            +AS D TLKI D+  G+ L TL GH        F+       S   DE V +
Sbjct: 100  SASDDKTLKIWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDESVKI 151


>ref|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus].
          Length = 334

 Score =  148 bits (373), Expect = 1e-35
 Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 6/249 (2%)
 Frame = +1

Query: 523  AYRFT--GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVH 693
            A +FT  GH  AV+ V FSP+G  LAS S DK ++IW   + K E T+   H   +  V 
Sbjct: 36   ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVA 94

Query: 694  FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 873
            + SD    V+ASDDKT+K+W     K L +L  H N+V C  F+P   LIVS S D++V+
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154

Query: 874  LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY-QLHS 1050
            +WD  + +C+ +   H   V+ V F+  G+ + ++  D   ++WD  + + L+      +
Sbjct: 155  IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214

Query: 1051 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFA 1224
              V+ + F P+G Y++ A+ D+TLK+ D  +G+ L T  GH+         FS TG  + 
Sbjct: 215  PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274

Query: 1225 SEGSDEQVM 1251
              GS++ ++
Sbjct: 275  VSGSEDNLV 283



 Score =  134 bits (337), Expect = 2e-31
 Identities = 79/254 (31%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+   GH+  ++ V +S +   L S S D  L +W +          GH + V C 
Sbjct: 76   DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            NF+P  +L+ SGS D++VRIW            AH+  V +VHF  DG   V++S D   
Sbjct: 136  NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W T   + L +L    N  V   KFSP+G+ I++A+ D T+KLWD +  +C+ +Y  H
Sbjct: 196  RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255

Query: 922  GG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  + +F    G  + +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 256  KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 316  IASAALENDKTIKL 329



 Score =  128 bits (322), Expect = 9e-30
 Identities = 83/273 (30%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
 Frame = +1

Query: 373  PYPEDPSLERHFK--GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHK 546
            P P  P+    F   GH  AV+ V FS N + LAS S D  + +W           +GHK
Sbjct: 28   PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 87

Query: 547  DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 726
              ++ V +S   +LL S S DKT++IW  +        + H+  V   +F       V+ 
Sbjct: 88   LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 727  SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 906
            S D+++++W     K L +L  H + V    F+ DG LIVS+S D   ++WD  S +C+ 
Sbjct: 148  SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207

Query: 907  SYCEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS 1083
            +  +     V++V F P+G  + AA +DNT+K+WD    + L+ Y  H      +  + S
Sbjct: 208  TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 267

Query: 1084 ---GNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
               G ++V+ S D+ + I +L    ++  L GH
Sbjct: 268  VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300



 Score =  123 bits (308), Expect = 4e-28
 Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 2/237 (0%)
 Frame = +1

Query: 535  TGHKDAVT-CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQ 711
            TG K   T      P+    A+ S+   V+   PN   + T+   HT  V SV F  +G+
Sbjct: 3    TGEKKPETEAARAQPTPSSSATQSKPTPVK---PNYALKFTL-AGHTKAVSSVKFSPNGE 58

Query: 712  SFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 891
               ++S DK IK+W  +  KF  ++S H   +    +S D  L+VSASDDKT+K+WD +S
Sbjct: 59   WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118

Query: 892  RECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALS 1071
             +C+ +   H  +V   +F+P    + +   D +V++WDV+T + L+    HS  V+A+ 
Sbjct: 119  GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 178

Query: 1072 FHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATT-RGFSRTGEYFASEGSD 1239
            F+  G+ +V++S D   +I D   G+ L TL     P  +   FS  G+Y  +   D
Sbjct: 179  FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 33/112 (29%), Positives = 52/112 (46%)
 Frame = +1

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            H   V+ V F P+G  +A++  D  +K+W     +  +    H   ++ +++    N LV
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            +AS D TLKI D+  G+ L TL GH        F+       S   DE V +
Sbjct: 104  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155


>ref|NP_777088.1| platelet-activating factor acetylhydrolase IB subunit alpha [Bos
            taurus].
          Length = 410

 Score =  147 bits (370), Expect = 3e-35
 Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 22/303 (7%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  VT V F      + S S D+ + VW  +         GH D+V  ++F  SG LL
Sbjct: 106  GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLL 165

Query: 592  ASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            AS S D T+++W  + +G   +     H   V SV    +G   V+AS DKTIK+W    
Sbjct: 166  ASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
               + + + H  WVR  + + DG LI S S+D+TV++W   ++EC     EH   V  + 
Sbjct: 224  GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 946  FHPS--------------------GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 1065
            + P                     G  + +   D T+K+WDV T   L     H   V  
Sbjct: 284  WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 1066 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQ 1245
            + FH  G ++++ + D TL++ D    R + TL+ H+   T+  F +T  Y  +   D+ 
Sbjct: 344  VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403

Query: 1246 VMV 1254
            V V
Sbjct: 404  VKV 406



 Score =  139 bits (350), Expect = 5e-33
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            E    ER  KGH D+V  + F  + K LAS S D  + +W  +         GH   V+ 
Sbjct: 138  ETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V   P+G  + S SRDKT+++W          F  H   VR V    DG    + S+D+T
Sbjct: 198  VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPD--------------------GRLIVSASDD 861
            ++VW    ++    L +H + V C  ++P+                    G  ++S S D
Sbjct: 258  VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 862  KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ 1041
            KT+K+WD ++  C+ +   H  +V  V FH  G  + +   D T++VWD +  R ++   
Sbjct: 318  KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 1042 LHSAAVNALSFHPSGNYLVTASSDSTLKI 1128
             H   V +L FH +  Y+VT S D T+K+
Sbjct: 378  AHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406



 Score =  125 bits (313), Expect = 1e-28
 Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R   GH   V+ V    N   + S S D  + +W ++       FTGH++ V  V  +  
Sbjct: 186  RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD------------------ 705
            G L+AS S D+TVR+WV   K      R H   V  + +  +                  
Sbjct: 246  GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 706  --GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
              G   ++ S DKTIK+W       L +L  H NWVR   F   G+ I+S +DDKT+++W
Sbjct: 306  KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 880  DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            D  ++ C+ +   H  FVT +DFH +   V    +D TVKVW+ R
Sbjct: 366  DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  122 bits (306), Expect = 7e-28
 Identities = 77/272 (28%), Positives = 122/272 (44%), Gaps = 20/272 (7%)
 Frame = +1

Query: 499  WHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTAT 678
            W  +P  + Y  +GH+  VT V F P   ++ S S D T+++W           + HT +
Sbjct: 94   WIPRPPEK-YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152

Query: 679  VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 858
            V  + F   G+   + S D TIK+W     + + ++  H + V      P+G  IVSAS 
Sbjct: 153  VEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212

Query: 859  DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY 1038
            DKT+K+W+  +  CV ++  H  +V  V  +  GT +A+   D TV+VW V T       
Sbjct: 213  DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272

Query: 1039 QLHSAAVNALSFHPSGNY--------------------LVTASSDSTLKILDLMEGRLLY 1158
            + H   V  +S+ P  +Y                    L++ S D T+K+ D+  G  L 
Sbjct: 273  REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332

Query: 1159 TLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TL GH        F   G++  S   D+ + V
Sbjct: 333  TLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364


>ref|NP_001095379.1| katanin p80 WD40-containing subunit B1 [Bos taurus].
          Length = 663

 Score =  127 bits (319), Expect = 2e-29
 Identities = 66/218 (30%), Positives = 108/218 (49%)
 Frame = +1

Query: 463  LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK 642
            LA+G  D  + +W +   +     TGH   V  V  +    L+ +GS+  ++R+W     
Sbjct: 36   LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95

Query: 643  GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF 822
                    H A + S+ F   G+   + S D  IK+W   R+  +F    H   VRC +F
Sbjct: 96   KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155

Query: 823  SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKV 1002
            SPDG+ + SA+DD TVKLWD T+ + +  +  H G V  V+FHP+   +A+   D T++ 
Sbjct: 156  SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF 215

Query: 1003 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
            WD+   +++   +     V ++ F+P G  L +   DS
Sbjct: 216  WDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDS 253



 Score =  122 bits (307), Expect = 5e-28
 Identities = 68/212 (32%), Positives = 103/212 (48%)
 Frame = +1

Query: 577  SGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWS 756
            SG LLA+G  D  V +W  N          HT+ V SV   +  +  V  S   +I+VW 
Sbjct: 32   SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91

Query: 757  THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 936
                K L +L  H   +    F P G  + S S D  +KLWD   + CV  Y  H   V 
Sbjct: 92   LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151

Query: 937  YVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
             + F P G  +A+A  D+TVK+WD+   +++  +  H+  VN + FHP+   L + SSD 
Sbjct: 152  CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211

Query: 1117 TLKILDLMEGRLLYTLHGHQGPATTRGFSRTG 1212
            T++  DL + +++  + G  GP  +  F+  G
Sbjct: 212  TIRFWDLEKFQVVSCIEGEPGPVRSILFNPDG 243



 Score =  116 bits (290), Expect = 5e-26
 Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
 Frame = +1

Query: 664  AHTATVRSVHFC-SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRL 840
            AH + V S+    + G+   T  DD  + +WS ++   + SL+ H + V   + +    L
Sbjct: 18   AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77

Query: 841  IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTH 1020
            IV+ S   ++++WD  + + + +   H   +  +DFHP G  VA+   D  +K+WD+R  
Sbjct: 78   IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137

Query: 1021 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGF 1200
              +  Y+ HS AV  L F P G +L +A+ D T+K+ DL  G+++    GH GP     F
Sbjct: 138  GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197

Query: 1201 SRTGEYFASEGSDEQVM 1251
                EY  + GS ++ +
Sbjct: 198  -HPNEYLLASGSSDRTI 213



 Score =  107 bits (266), Expect = 3e-23
 Identities = 61/228 (26%), Positives = 104/228 (45%)
 Frame = +1

Query: 388  PSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN 567
            P+      GH   V  V  +   + + +GS    + VW ++         GHK  +  ++
Sbjct: 53   PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLD 112

Query: 568  FSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK 747
            F P G  +ASGS+D  +++W    KG    +R H+  VR + F  DG+   +A+DD T+K
Sbjct: 113  FHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172

Query: 748  VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 927
            +W     K +     H   V   +F P+  L+ S S D+T++ WD    + V       G
Sbjct: 173  LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232

Query: 928  FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALS 1071
             V  + F+P G C+  +G  ++++V+     R      +H   V  L+
Sbjct: 233  PVRSILFNPDGCCL-YSGCQDSLRVYGWEPERCFDVVLVHWGKVADLA 279



 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 52/184 (28%), Positives = 86/184 (46%)
 Frame = +1

Query: 382 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
           E   + R   GH+  +  +DF    + +ASGS D+ + +W ++ +   +R+ GH  AV C
Sbjct: 93  EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152

Query: 562 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
           + FSP G  LAS + D TV++W        + F  HT  V  V F  +     + S D+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212

Query: 742 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
           I+ W   + + +  +      VR   F+PDG  + S   D +++++      C      H
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVH 271

Query: 922 GGFV 933
            G V
Sbjct: 272 WGKV 275


>ref|NP_001069717.1| F-box/WD repeat-containing protein 7 [Bos taurus].
          Length = 627

 Score =  126 bits (316), Expect = 5e-29
 Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 4/282 (1%)
 Frame = +1

Query: 409  KGHRD-AVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            KGH D  +TC+ F  N  ++ SGS D+ L VW            GH   V       +  
Sbjct: 297  KGHDDHVITCLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 352

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            ++ SGS D+T+++W             HT+TVR +H     +  V+ S D T++VW    
Sbjct: 353  IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIET 410

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + L  L  H+  VRC ++  DGR +VS + D  VK+WD  +  C+H+   H   V  + 
Sbjct: 411  GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F   G  V +  +D +++VWDV T   +     H +  + +      N LV+ ++DST+K
Sbjct: 469  F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 524

Query: 1126 ILDLMEGRLLYTLHG---HQGPATTRGFSRTGEYFASEGSDE 1242
            I D+  G+ L TL G   HQ   T   F++    F    SD+
Sbjct: 525  IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSSDD 563



 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GH   V C+    + K++ SGS D+ L VW ++     +   GH  AV CV +   G  +
Sbjct: 379  GHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRV 434

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
             SG+ D  V++W P  +      + HT  V S+ F  DG   V+ S D +I+VW      
Sbjct: 435  VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 492

Query: 772  FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC---EHGGFVTYV 942
             + +L+ H +     +   +  ++VS + D TVK+WD  + +C+ +     +H   VT +
Sbjct: 493  CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 550

Query: 943  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH 1035
             F+ +   V  +  D TVK+WD++T   +++
Sbjct: 551  QFNKN--FVITSSDDGTVKLWDLKTGEFIRN 579


>ref|NP_001039847.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Bos taurus].
          Length = 358

 Score =  124 bits (310), Expect = 2e-28
 Identities = 85/289 (29%), Positives = 130/289 (44%), Gaps = 10/289 (3%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHL 588
            GH   V C  F  N   LAS   D  +++W++      Y    GH  AV  ++++  G +
Sbjct: 65   GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124

Query: 589  LASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFV-TASDDKTIKVWSTHR 765
            L S S DKTV +W           + HT+ V S +    G   V T SDD T+K+W   R
Sbjct: 125  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-R 183

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
            +K      Q+   V    F+     I+S   D  +K+WD    +  ++   H   VT + 
Sbjct: 184  KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243

Query: 946  FHPSGTCVAAAGMDNTVKVWDVR----THRLLQHYQ--LHSAAVNAL--SFHPSGNYLVT 1101
                G+ + +  MDNTV+VWDVR      R ++ +Q  +H+   N L  S+ P G+ +  
Sbjct: 244  LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAA 303

Query: 1102 ASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQV 1248
             S+D  + + D    R+LY L GH G      F        S  SD+++
Sbjct: 304  GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352



 Score =  116 bits (291), Expect = 4e-26
 Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
 Frame = +1

Query: 535  TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGES---TVFRAHTATVRSVHFCSD 705
            +GH+  V C  F P+G  LAS   D+ + +W  N+ G+       + H+  V  +H+ +D
Sbjct: 64   SGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELHYNTD 121

Query: 706  GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 882
            G    +AS DKT+ VW +   + +  L  H ++V  C       +L+ + SDD TVKLWD
Sbjct: 122  GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181

Query: 883  KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 1062
               +  + ++ ++   V  V F+ +   + + G+DN +KVWD+R ++L    + H+ +V 
Sbjct: 182  IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240

Query: 1063 ALSFHPSGNYLVTASSDSTLKILDL 1137
             LS    G+YL++ + D+T+++ D+
Sbjct: 241  GLSLSSEGSYLLSNAMDNTVRVWDV 265



 Score =  106 bits (265), Expect = 4e-23
 Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 12/250 (4%)
 Frame = +1

Query: 409  KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAV-TCVNFSPSGH 585
            KGH  AV  + ++ +   L S S D  + VW  +   R  R  GH   V +C        
Sbjct: 107  KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 166

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            L+ +GS D TV++W    K     F+ +T  V +V F       ++   D  IKVW   +
Sbjct: 167  LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD----KTSREC-------VHSY 912
             K  +++  H + V     S +G  ++S + D TV++WD         C       VH++
Sbjct: 226  NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNF 285

Query: 913  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
             ++   +    + P G+ +AA   D  V VWD  + R+L     H+ ++N ++FHP    
Sbjct: 286  EKN---LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 342

Query: 1093 LVTASSDSTL 1122
            +++ASSD  L
Sbjct: 343  ILSASSDKRL 352



 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
 Frame = +1

Query: 667  HTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFS-LSQHINWVRCAKFSPDGRLI 843
            H   V    F  +G +  +A  D+ I +W+ +     ++ L  H   V    ++ DG ++
Sbjct: 66   HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125

Query: 844  VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDN-TVKVWDVRTH 1020
             SAS DKTV +WD  + E V     H  FV        G  +   G D+ TVK+WD+R  
Sbjct: 126  FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185

Query: 1021 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGF 1200
              +Q +Q ++  V A++F+ + + +++   D+ +K+ DL + +L YT+ GH    T    
Sbjct: 186  AAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 244

Query: 1201 SRTGEYFASEGSDEQVMV 1254
            S  G Y  S   D  V V
Sbjct: 245  SSEGSYLLSNAMDNTVRV 262



 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
 Frame = +1

Query: 400  RHFKGHRDAV-TCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 576
            +  KGH   V +C       + + +GS D  + +W ++ ++    F      V  V F+ 
Sbjct: 146  KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFND 204

Query: 577  SGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWS 756
            +   + SG  D  +++W       +   R H  +V  +   S+G   ++ + D T++VW 
Sbjct: 205  TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264

Query: 757  TH------RQKFLFSLSQHI---NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 909
                    R   +F  + H    N +RC+ +SPDG  I + S D+ V +WD TSR  ++ 
Sbjct: 265  VRPFAPKERCVRIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYK 323

Query: 910  YCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
               H G +  V FHP    + +A  D  + + +++
Sbjct: 324  LPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 52,503,012
Number of extensions: 1609075
Number of successful extensions: 10318
Number of sequences better than 1.0e-05: 194
Number of HSP's gapped: 8415
Number of HSP's successfully gapped: 658
Length of query: 418
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 313
Effective length of database: 14,207,134
Effective search space: 4446832942
Effective search space used: 4446832942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008999
         (1255 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isof...   584   e-167
Alignment   gi|XP_859995.1| PREDICTED: similar to WD repeat domain 51A isof...   528   e-150
Alignment   gi|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Can...   407   e-113
Alignment   gi|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiar...   153   3e-37
Alignment   gi|XP_537775.2| PREDICTED: similar to platelet-activating facto...   147   3e-35
Alignment   gi|XP_854482.1| PREDICTED: similar to platelet-activating facto...   147   3e-35
Alignment   gi|XP_868508.1| PREDICTED: similar to platelet-activating facto...   147   3e-35
Alignment   gi|XP_868519.1| PREDICTED: similar to platelet-activating facto...   145   1e-34
Alignment   gi|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis...   137   2e-32
Alignment   gi|XP_862542.1| PREDICTED: similar to Katanin p80 WD40-containi...   127   3e-29

>ref|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isoform 1 [Canis
            familiaris].
          Length = 406

 Score =  584 bits (1505), Expect = e-167
 Identities = 277/294 (94%), Positives = 284/294 (96%)
 Frame = +1

Query: 373  PYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 552
            P PEDPSLERHFKGHRDA+T VDFS N KQLASGSMDSCLMVWHMKPQSRAYRF GHKDA
Sbjct: 4    PCPEDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDA 63

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 732
            VTCVNFSPSGHLLASGSRDKTVRIW+PN+KGESTVFRAHTATVRSVHFCSDGQS VTASD
Sbjct: 64   VTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASD 123

Query: 733  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
            DKT+KVWSTHRQKFLFSLSQHINWVRCA+FSPDGRLIVSASDDKTVKLWDKTSRECVHSY
Sbjct: 124  DKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 183

Query: 913  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
            CEHGGFVTYVDFHPSGTC+AAA MDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY
Sbjct: 184  CEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 243

Query: 1093 LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            L+TASSDSTLKILDLMEGRLLYTLHGHQGPATT  FSRTGEYFAS GSDEQVMV
Sbjct: 244  LLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|XP_859995.1| PREDICTED: similar to WD repeat domain 51A isoform 2 [Canis
            familiaris].
          Length = 388

 Score =  528 bits (1360), Expect = e-150
 Identities = 254/294 (86%), Positives = 267/294 (90%)
 Frame = +1

Query: 373  PYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 552
            P PEDPSLERHFKGHRDA+T VDFS N KQLASGSMDSCLMVWHMKPQSRAYRF GHKDA
Sbjct: 4    PCPEDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDA 63

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 732
            VTCVNFSPSGHLLASGSRDKTVRIW+PN+KGESTVFRAHTATVRSVHFCSDGQS VTASD
Sbjct: 64   VTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASD 123

Query: 733  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
            DKT+KVWSTHRQKFLFSLSQHINWVRCA+FSPDGRLIVSASDDKTVKLWDKTSRECVHSY
Sbjct: 124  DKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 183

Query: 913  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
            CEHGGFVTYVDFHPSGTC++++G++                  +HSAAVNALSFHPSGNY
Sbjct: 184  CEHGGFVTYVDFHPSGTCISSSGVN------------------VHSAAVNALSFHPSGNY 225

Query: 1093 LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            L+TASSDSTLKILDLMEGRLLYTLHGHQGPATT  FSRTGEYFAS GSDEQVMV
Sbjct: 226  LLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 279


>ref|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Canis familiaris].
          Length = 833

 Score =  407 bits (1045), Expect = e-113
 Identities = 196/359 (54%), Positives = 259/359 (72%), Gaps = 7/359 (1%)
 Frame = +1

Query: 199  PGCKKPRRPVSFNCGGRG-------GAKRPALLLAAVXXXXXXXXXXXXXXXXXXXXXXX 357
            PGC + RR VS + G RG       G   P+   AA                        
Sbjct: 312  PGCLRLRRAVSTSAGARGRRAWPQAGTHLPSRAWAAAASLPLLPVTRIS----------- 360

Query: 358  XXXXXPYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFT 537
                    EDP LER+FKGH+ A+T VDFS + KQLA+ S D+ LM+W+ KPQ+RA+R+ 
Sbjct: 361  --------EDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV 412

Query: 538  GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSF 717
            GHKD VT V FSP G+LLAS SRD+TVR+W+P+ +G+S+ F+AHTA VRSV F +DGQ  
Sbjct: 413  GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFL 472

Query: 718  VTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 897
             TAS+DK+IKVW+ +RQ+FL+SL +H +WVRCAKFSPDGRLIVS S+DKT+K+WD T+++
Sbjct: 473  ATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 532

Query: 898  CVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 1077
            CV+++ +  GF  +VDF+P+GTC+A+AG D+TVK+WD+R ++LLQHYQ+HS  VN +SFH
Sbjct: 533  CVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFH 592

Query: 1078 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            PSGNY++TASSD TLKILDL+EGRL+YTL GH GP  T  FS+ GE F+S G+D QV++
Sbjct: 593  PSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLL 651



 Score =  118 bits (295), Expect = 1e-26
 Identities = 68/209 (32%), Positives = 91/209 (43%)
 Frame = +1

Query: 379  PEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 558
            P+       FK H   V  VDFS + + LA+ S D  + VW+M  Q   Y    H   V 
Sbjct: 444  PDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVR 503

Query: 559  CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 738
            C  FSP G L+ S S DKT++IW    K     F         V F  +G    +A  D 
Sbjct: 504  CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDH 563

Query: 739  TIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 918
            T+K+W     K L     H   V C  F P G  I++AS D T+K+ D      +++   
Sbjct: 564  TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQG 623

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVW 1005
            H G V  V F   G   ++ G D  V +W
Sbjct: 624  HTGPVFTVSFSKGGELFSSGGADTQVLLW 652



 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
 Frame = +1

Query: 436 VDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKT 615
           VDF+ N   +AS   D  + +W ++       +  H   V CV+F PSG+ + + S D T
Sbjct: 547 VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGT 606

Query: 616 VRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 762
           ++I +  ++G      + HT  V +V F   G+ F +   D  + +W T+
Sbjct: 607 LKI-LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTN 655


>ref|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris].
          Length = 415

 Score =  153 bits (387), Expect = 3e-37
 Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 1/278 (0%)
 Frame = +1

Query: 409  KGHRDAVTCVDFSFNM-KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            +GHR+ V  + F+     ++A+GS D    +W ++     + F GH   + C++F+P   
Sbjct: 131  EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST 190

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            L+A+GS D T ++W      E    R H+A + S+ F + G   VT S D T+ VW    
Sbjct: 191  LVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEADT 250

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + +++L  H   +  A F+ D  LI++ S DKT  LWD ++ +CV +   H   +    
Sbjct: 251  GRKVYTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSC 310

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F  +G  +A A  D T +V+   T + L   + H   ++ +SF+P GN L+T S+D T +
Sbjct: 311  FDYTGKLIATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADETAR 370

Query: 1126 ILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSD 1239
            I D   G+ L  L GH     +  F+  G+   +   D
Sbjct: 371  IWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKD 408



 Score =  131 bits (329), Expect = 2e-30
 Identities = 66/241 (27%), Positives = 123/241 (51%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            F+GH   + C+ F+     +A+GSMD+   +W ++     +   GH   +  ++F+ SG 
Sbjct: 173  FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSFNTSGD 232

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
             + +GS D TV +W  +   +      H A + S  F  D    +T S DKT  +W    
Sbjct: 233  RIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDASN 292

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             K + +L+ H + +  + F   G+LI +AS D T +++   +R+C+     H G ++ + 
Sbjct: 293  GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVFSAATRKCLTKLEGHEGEISKIS 352

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F+P G  +     D T ++WD +T + LQ  + H+  + + +F+  G+ ++T S D+T +
Sbjct: 353  FNPQGNRLLTGSADETARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCR 412

Query: 1126 I 1128
            I
Sbjct: 413  I 413



 Score =  117 bits (292), Expect = 3e-26
 Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
 Frame = +1

Query: 655  VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF-SPD 831
            V RAH   + +V     G  F+T S D+T K+W T   + L +L  H N V    F +P 
Sbjct: 87   VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPY 146

Query: 832  GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV 1011
            G  I + S DKT KLW   + +C H++  H   +  + F+P  T VA   MD T K+WD+
Sbjct: 147  GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206

Query: 1012 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
            ++   +   + HSA + +LSF+ SG+ +VT S D T+ + +   GR +YTL GH
Sbjct: 207  QSGEEVFTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGH 260



 Score =  109 bits (273), Expect = 5e-24
 Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 1/230 (0%)
 Frame = +1

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD-GQSFVTAS 729
            +T V  + SG    +GS D+T ++W      E      H   V ++ F +  G    T S
Sbjct: 95   LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS 154

Query: 730  DDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 909
             DKT K+WS    K   +   H   + C  F+P   L+ + S D T KLWD  S E V +
Sbjct: 155  FDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFT 214

Query: 910  YCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN 1089
               H   +  + F+ SG  +     D+TV VW+  T R +     H A +++  F+   +
Sbjct: 215  LRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWDCS 274

Query: 1090 YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSD 1239
             ++T S D T  + D   G+ + TL GH        F  TG+  A+  +D
Sbjct: 275  LILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324



 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
 Frame = +1

Query: 772  FLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDF 948
            +LF  L  HI  +     +  G   ++ S D+T KLWD  S E +H+   H   V  + F
Sbjct: 83   YLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAF 142

Query: 949  -HPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
             +P G  +A    D T K+W V T +    ++ H+A +  LSF+P    + T S D+T K
Sbjct: 143  NNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202

Query: 1126 ILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            + D+  G  ++TL GH     +  F+ +G+   +   D  V V
Sbjct: 203  LWDIQSGEEVFTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAV 245



 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 40/156 (25%), Positives = 70/156 (44%)
 Frame = +1

Query: 412 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
           GH   ++   F+++   + +GSMD   M+W           TGH D +    F  +G L+
Sbjct: 259 GHCAEISSALFNWDCSLILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSCFDYTGKLI 318

Query: 592 ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
           A+ S D T R++    +   T    H   +  + F   G   +T S D+T ++W     +
Sbjct: 319 ATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADETARIWDAQTGQ 378

Query: 772 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
            L  L  H + +    F+  G +I++ S D T ++W
Sbjct: 379 CLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414


>ref|XP_537775.2| PREDICTED: similar to platelet-activating factor acetylhydrolase beta
            subunit isoform 1 [Canis familiaris].
          Length = 372

 Score =  147 bits (370), Expect = 3e-35
 Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 22/303 (7%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  VT V F      + S S D+ + VW  +         GH D+V  ++F  SG LL
Sbjct: 68   GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 127

Query: 592  ASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            AS S D T+++W  + +G   +     H   V SV    +G   V+AS DKTIK+W    
Sbjct: 128  ASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 185

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
               + + + H  WVR  + + DG LI S S+D+TV++W   ++EC     EH   V  + 
Sbjct: 186  GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 245

Query: 946  FHPS--------------------GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 1065
            + P                     G  + +   D T+K+WDV T   L     H   V  
Sbjct: 246  WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 305

Query: 1066 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQ 1245
            + FH  G ++++ + D TL++ D    R + TL+ H+   T+  F +T  Y  +   D+ 
Sbjct: 306  VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 365

Query: 1246 VMV 1254
            V V
Sbjct: 366  VKV 368



 Score =  139 bits (350), Expect = 6e-33
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            E    ER  KGH D+V  + F  + K LAS S D  + +W  +         GH   V+ 
Sbjct: 100  ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 159

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V   P+G  + S SRDKT+++W          F  H   VR V    DG    + S+D+T
Sbjct: 160  VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 219

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPD--------------------GRLIVSASDD 861
            ++VW    ++    L +H + V C  ++P+                    G  ++S S D
Sbjct: 220  VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 279

Query: 862  KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ 1041
            KT+K+WD ++  C+ +   H  +V  V FH  G  + +   D T++VWD +  R ++   
Sbjct: 280  KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 339

Query: 1042 LHSAAVNALSFHPSGNYLVTASSDSTLKI 1128
             H   V +L FH +  Y+VT S D T+K+
Sbjct: 340  AHEHFVTSLDFHKTAPYVVTGSVDQTVKV 368



 Score =  125 bits (313), Expect = 1e-28
 Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R   GH   V+ V    N   + S S D  + +W ++       FTGH++ V  V  +  
Sbjct: 148  RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 207

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD------------------ 705
            G L+AS S D+TVR+WV   K      R H   V  + +  +                  
Sbjct: 208  GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 267

Query: 706  --GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
              G   ++ S DKTIK+W       L +L  H NWVR   F   G+ I+S +DDKT+++W
Sbjct: 268  KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 327

Query: 880  DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            D  ++ C+ +   H  FVT +DFH +   V    +D TVKVW+ R
Sbjct: 328  DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 372



 Score =  122 bits (307), Expect = 6e-28
 Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
 Frame = +1

Query: 499  WHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTAT 678
            W  +P  + Y  +GH+  VT V F P   ++ S S D T+++W           + HT +
Sbjct: 56   WIPRPPEK-YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 114

Query: 679  VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 858
            V+ + F   G+   + S D TIK+W     + + ++  H + V      P+G  IVSAS 
Sbjct: 115  VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 174

Query: 859  DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY 1038
            DKT+K+W+  +  CV ++  H  +V  V  +  GT +A+   D TV+VW V T       
Sbjct: 175  DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 234

Query: 1039 QLHSAAVNALSFHPSGNY--------------------LVTASSDSTLKILDLMEGRLLY 1158
            + H   V  +S+ P  +Y                    L++ S D T+K+ D+  G  L 
Sbjct: 235  REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 294

Query: 1159 TLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TL GH        F   G++  S   D+ + V
Sbjct: 295  TLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 326


>ref|XP_854482.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta
            subunit isoform 2 [Canis familiaris].
          Length = 410

 Score =  147 bits (370), Expect = 3e-35
 Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 22/303 (7%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  VT V F      + S S D+ + VW  +         GH D+V  ++F  SG LL
Sbjct: 106  GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165

Query: 592  ASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            AS S D T+++W  + +G   +     H   V SV    +G   V+AS DKTIK+W    
Sbjct: 166  ASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
               + + + H  WVR  + + DG LI S S+D+TV++W   ++EC     EH   V  + 
Sbjct: 224  GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 946  FHPS--------------------GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 1065
            + P                     G  + +   D T+K+WDV T   L     H   V  
Sbjct: 284  WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 1066 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQ 1245
            + FH  G ++++ + D TL++ D    R + TL+ H+   T+  F +T  Y  +   D+ 
Sbjct: 344  VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403

Query: 1246 VMV 1254
            V V
Sbjct: 404  VKV 406



 Score =  139 bits (350), Expect = 6e-33
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            E    ER  KGH D+V  + F  + K LAS S D  + +W  +         GH   V+ 
Sbjct: 138  ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V   P+G  + S SRDKT+++W          F  H   VR V    DG    + S+D+T
Sbjct: 198  VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPD--------------------GRLIVSASDD 861
            ++VW    ++    L +H + V C  ++P+                    G  ++S S D
Sbjct: 258  VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 862  KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ 1041
            KT+K+WD ++  C+ +   H  +V  V FH  G  + +   D T++VWD +  R ++   
Sbjct: 318  KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 1042 LHSAAVNALSFHPSGNYLVTASSDSTLKI 1128
             H   V +L FH +  Y+VT S D T+K+
Sbjct: 378  AHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406



 Score =  125 bits (313), Expect = 1e-28
 Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R   GH   V+ V    N   + S S D  + +W ++       FTGH++ V  V  +  
Sbjct: 186  RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD------------------ 705
            G L+AS S D+TVR+WV   K      R H   V  + +  +                  
Sbjct: 246  GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 706  --GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
              G   ++ S DKTIK+W       L +L  H NWVR   F   G+ I+S +DDKT+++W
Sbjct: 306  KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 880  DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            D  ++ C+ +   H  FVT +DFH +   V    +D TVKVW+ R
Sbjct: 366  DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  122 bits (307), Expect = 6e-28
 Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
 Frame = +1

Query: 499  WHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTAT 678
            W  +P  + Y  +GH+  VT V F P   ++ S S D T+++W           + HT +
Sbjct: 94   WIPRPPEK-YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152

Query: 679  VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 858
            V+ + F   G+   + S D TIK+W     + + ++  H + V      P+G  IVSAS 
Sbjct: 153  VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212

Query: 859  DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY 1038
            DKT+K+W+  +  CV ++  H  +V  V  +  GT +A+   D TV+VW V T       
Sbjct: 213  DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272

Query: 1039 QLHSAAVNALSFHPSGNY--------------------LVTASSDSTLKILDLMEGRLLY 1158
            + H   V  +S+ P  +Y                    L++ S D T+K+ D+  G  L 
Sbjct: 273  REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332

Query: 1159 TLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TL GH        F   G++  S   D+ + V
Sbjct: 333  TLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364


>ref|XP_868508.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta
            subunit isoform 3 [Canis familiaris].
          Length = 345

 Score =  147 bits (370), Expect = 3e-35
 Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 22/303 (7%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  VT V F      + S S D+ + VW  +         GH D+V  ++F  SG LL
Sbjct: 41   GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 100

Query: 592  ASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            AS S D T+++W  + +G   +     H   V SV    +G   V+AS DKTIK+W    
Sbjct: 101  ASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 158

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
               + + + H  WVR  + + DG LI S S+D+TV++W   ++EC     EH   V  + 
Sbjct: 159  GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 218

Query: 946  FHPS--------------------GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 1065
            + P                     G  + +   D T+K+WDV T   L     H   V  
Sbjct: 219  WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 278

Query: 1066 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQ 1245
            + FH  G ++++ + D TL++ D    R + TL+ H+   T+  F +T  Y  +   D+ 
Sbjct: 279  VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 338

Query: 1246 VMV 1254
            V V
Sbjct: 339  VKV 341



 Score =  139 bits (350), Expect = 6e-33
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            E    ER  KGH D+V  + F  + K LAS S D  + +W  +         GH   V+ 
Sbjct: 73   ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 132

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V   P+G  + S SRDKT+++W          F  H   VR V    DG    + S+D+T
Sbjct: 133  VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 192

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPD--------------------GRLIVSASDD 861
            ++VW    ++    L +H + V C  ++P+                    G  ++S S D
Sbjct: 193  VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 252

Query: 862  KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ 1041
            KT+K+WD ++  C+ +   H  +V  V FH  G  + +   D T++VWD +  R ++   
Sbjct: 253  KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 312

Query: 1042 LHSAAVNALSFHPSGNYLVTASSDSTLKI 1128
             H   V +L FH +  Y+VT S D T+K+
Sbjct: 313  AHEHFVTSLDFHKTAPYVVTGSVDQTVKV 341



 Score =  125 bits (313), Expect = 1e-28
 Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R   GH   V+ V    N   + S S D  + +W ++       FTGH++ V  V  +  
Sbjct: 121  RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 180

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD------------------ 705
            G L+AS S D+TVR+WV   K      R H   V  + +  +                  
Sbjct: 181  GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 240

Query: 706  --GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
              G   ++ S DKTIK+W       L +L  H NWVR   F   G+ I+S +DDKT+++W
Sbjct: 241  KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300

Query: 880  DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            D  ++ C+ +   H  FVT +DFH +   V    +D TVKVW+ R
Sbjct: 301  DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345



 Score =  122 bits (307), Expect = 6e-28
 Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
 Frame = +1

Query: 499  WHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTAT 678
            W  +P  + Y  +GH+  VT V F P   ++ S S D T+++W           + HT +
Sbjct: 29   WIPRPPEK-YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 87

Query: 679  VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 858
            V+ + F   G+   + S D TIK+W     + + ++  H + V      P+G  IVSAS 
Sbjct: 88   VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 147

Query: 859  DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY 1038
            DKT+K+W+  +  CV ++  H  +V  V  +  GT +A+   D TV+VW V T       
Sbjct: 148  DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 207

Query: 1039 QLHSAAVNALSFHPSGNY--------------------LVTASSDSTLKILDLMEGRLLY 1158
            + H   V  +S+ P  +Y                    L++ S D T+K+ D+  G  L 
Sbjct: 208  REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 267

Query: 1159 TLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TL GH        F   G++  S   D+ + V
Sbjct: 268  TLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 299


>ref|XP_868519.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta
            subunit isoform 5 [Canis familiaris].
          Length = 415

 Score =  145 bits (365), Expect = 1e-34
 Identities = 91/308 (29%), Positives = 139/308 (45%), Gaps = 27/308 (8%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  VT V F      + S S D+ + VW  +         GH D+V  ++F  SG LL
Sbjct: 106  GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165

Query: 592  ASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            AS S D T+++W  + +G   +     H   V SV    +G   V+AS DKTIK+W    
Sbjct: 166  ASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
               + + + H  WVR  + + DG LI S S+D+TV++W   ++EC     EH   V  + 
Sbjct: 224  GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 946  FHPS-------------------------GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHS 1050
            + P                          G  + +   D T+K+WDV T   L     H 
Sbjct: 284  WAPESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 343

Query: 1051 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASE 1230
              V  + FH  G ++++ + D TL++ D    R + TL+ H+   T+  F +T  Y  + 
Sbjct: 344  NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 403

Query: 1231 GSDEQVMV 1254
              D+ V V
Sbjct: 404  SVDQTVKV 411



 Score =  137 bits (345), Expect = 2e-32
 Identities = 80/274 (29%), Positives = 125/274 (45%), Gaps = 25/274 (9%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            E    ER  KGH D+V  + F  + K LAS S D  + +W  +         GH   V+ 
Sbjct: 138  ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V   P+G  + S SRDKT+++W          F  H   VR V    DG    + S+D+T
Sbjct: 198  VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPD-------------------------GRLIV 846
            ++VW    ++    L +H + V C  ++P+                         G  ++
Sbjct: 258  VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSEEENPRTKKSGKPGPFLL 317

Query: 847  SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRL 1026
            S S DKT+K+WD ++  C+ +   H  +V  V FH  G  + +   D T++VWD +  R 
Sbjct: 318  SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 377

Query: 1027 LQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 1128
            ++    H   V +L FH +  Y+VT S D T+K+
Sbjct: 378  MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 411



 Score =  123 bits (308), Expect = 4e-28
 Identities = 72/230 (31%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R   GH   V+ V    N   + S S D  + +W ++       FTGH++ V  V  +  
Sbjct: 186  RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD------------------ 705
            G L+AS S D+TVR+WV   K      R H   V  + +  +                  
Sbjct: 246  GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSEEENPR 305

Query: 706  -------GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDK 864
                   G   ++ S DKTIK+W       L +L  H NWVR   F   G+ I+S +DDK
Sbjct: 306  TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 365

Query: 865  TVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            T+++WD  ++ C+ +   H  FVT +DFH +   V    +D TVKVW+ R
Sbjct: 366  TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 415



 Score =  120 bits (302), Expect = 2e-27
 Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 25/277 (9%)
 Frame = +1

Query: 499  WHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTAT 678
            W  +P  + Y  +GH+  VT V F P   ++ S S D T+++W           + HT +
Sbjct: 94   WIPRPPEK-YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152

Query: 679  VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 858
            V+ + F   G+   + S D TIK+W     + + ++  H + V      P+G  IVSAS 
Sbjct: 153  VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212

Query: 859  DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY 1038
            DKT+K+W+  +  CV ++  H  +V  V  +  GT +A+   D TV+VW V T       
Sbjct: 213  DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272

Query: 1039 QLHSAAVNALSFHPSGNY-------------------------LVTASSDSTLKILDLME 1143
            + H   V  +S+ P  +Y                         L++ S D T+K+ D+  
Sbjct: 273  REHEHVVECISWAPESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKTIKMWDVST 332

Query: 1144 GRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            G  L TL GH        F   G++  S   D+ + V
Sbjct: 333  GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 369


>ref|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis familiaris].
          Length = 334

 Score =  137 bits (346), Expect = 2e-32
 Identities = 84/249 (33%), Positives = 133/249 (53%), Gaps = 6/249 (2%)
 Frame = +1

Query: 523  AYRFT--GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVH 693
            A +FT  GH  AV+ V FSP+G  LAS S DK ++IW   + K E T+   H   +  V 
Sbjct: 36   ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVA 94

Query: 694  FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 873
            + SD    V+ASDDKT+K+W     K L +L  H N+V C  F+P   LIVS S D++V+
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154

Query: 874  LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTV-KVWDVRTHRLLQHYQLHS 1050
            +WD  + +C+ +   H   V+ V F+  G+ + ++  D    K  +  +  +       +
Sbjct: 155  IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDN 214

Query: 1051 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFA 1224
              V+ + F P+G Y++ A+ D+TLK+ D  +G+ L T  GH+         FS TG  + 
Sbjct: 215  PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274

Query: 1225 SEGSDEQVM 1251
              GS++ ++
Sbjct: 275  VSGSEDNLV 283



 Score =  124 bits (311), Expect = 2e-28
 Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 9/257 (3%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+   GH+  ++ V +S +   L S S D  L +W +          GH + V C 
Sbjct: 76   DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDD--- 735
            NF+P  +L+ SGS D++VRIW            AH+  V +VHF  DG   V++S D   
Sbjct: 136  NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195

Query: 736  -KTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
             KT    S   +  L   +  +++V   KFSP+G+ I++A+ D T+KLWD +  +C+ +Y
Sbjct: 196  GKTGNAASRCMKLILDDDNPPVSFV---KFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 252

Query: 913  CEHGG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS 1083
              H    +  + +F    G  + +   DN V +W+++T  ++Q  Q H+  V + + HP+
Sbjct: 253  TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT 312

Query: 1084 GNYLVTAS--SDSTLKI 1128
             N + +A+  +D T+K+
Sbjct: 313  ENIIASAALENDKTIKL 329



 Score =  115 bits (288), Expect = 9e-26
 Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 6/273 (2%)
 Frame = +1

Query: 373  PYPEDPSLERHFK--GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHK 546
            P P  P+    F   GH  AV+ V FS N + LAS S D  + +W           +GHK
Sbjct: 28   PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 87

Query: 547  DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 726
              ++ V +S   +LL S S DKT++IW  +        + H+  V   +F       V+ 
Sbjct: 88   LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 727  SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 906
            S D+++++W     K L +L  H + V    F+ DG LIVS+S D         +  C+ 
Sbjct: 148  SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMK 207

Query: 907  SYCEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS 1083
               +     V++V F P+G  + AA +DNT+K+WD    + L+ Y  H      +  + S
Sbjct: 208  LILDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 267

Query: 1084 ---GNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
               G ++V+ S D+ + I +L    ++  L GH
Sbjct: 268  VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300



 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 33/112 (29%), Positives = 52/112 (46%)
 Frame = +1

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            H   V+ V F P+G  +A++  D  +K+W     +  +    H   ++ +++    N LV
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            +AS D TLKI D+  G+ L TL GH        F+       S   DE V +
Sbjct: 104  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155


>ref|XP_862542.1| PREDICTED: similar to Katanin p80 WD40-containing subunit B1 (Katanin
            p80 subunit B1) (p80 katanin) isoform 2 [Canis
            familiaris].
          Length = 655

 Score =  127 bits (318), Expect = 3e-29
 Identities = 66/218 (30%), Positives = 108/218 (49%)
 Frame = +1

Query: 463  LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK 642
            LA+G  D  + +W +   +     TGH   V  V  +    L+ +GS+  ++R+W     
Sbjct: 36   LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95

Query: 643  GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF 822
                    H A + S+ F   G+   + S D  IK+W   R+  +F    H   VRC +F
Sbjct: 96   KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155

Query: 823  SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKV 1002
            SPDG+ + SA+DD TVKLWD T+ + +  +  H G V  V+FHP+   +A+   D T++ 
Sbjct: 156  SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF 215

Query: 1003 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
            WD+   +++   +     V ++ F+P G  L +   DS
Sbjct: 216  WDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS 253



 Score =  122 bits (307), Expect = 6e-28
 Identities = 68/212 (32%), Positives = 103/212 (48%)
 Frame = +1

Query: 577  SGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWS 756
            SG LLA+G  D  V +W  N          HT+ V SV   +  +  V  S   +I+VW 
Sbjct: 32   SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91

Query: 757  THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 936
                K L +L  H   +    F P G  + S S D  +KLWD   + CV  Y  H   V 
Sbjct: 92   LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151

Query: 937  YVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
             + F P G  +A+A  D+TVK+WD+   +++  +  H+  VN + FHP+   L + SSD 
Sbjct: 152  CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211

Query: 1117 TLKILDLMEGRLLYTLHGHQGPATTRGFSRTG 1212
            T++  DL + +++  + G  GP  +  F+  G
Sbjct: 212  TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243



 Score =  116 bits (290), Expect = 5e-26
 Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
 Frame = +1

Query: 664  AHTATVRSVHFC-SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRL 840
            AH + V S+    + G+   T  DD  + +WS ++   + SL+ H + V   + +    L
Sbjct: 18   AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77

Query: 841  IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTH 1020
            IV+ S   ++++WD  + + + +   H   +  +DFHP G  VA+   D  +K+WD+R  
Sbjct: 78   IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137

Query: 1021 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGF 1200
              +  Y+ HS AV  L F P G +L +A+ D T+K+ DL  G+++    GH GP     F
Sbjct: 138  GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197

Query: 1201 SRTGEYFASEGSDEQVM 1251
                EY  + GS ++ +
Sbjct: 198  -HPNEYLLASGSSDRTI 213



 Score =  106 bits (264), Expect = 5e-23
 Identities = 57/201 (28%), Positives = 93/201 (46%)
 Frame = +1

Query: 388 PSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN 567
           P+      GH   V  V  +   + + +GS    + VW ++         GHK  +  ++
Sbjct: 53  PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLD 112

Query: 568 FSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK 747
           F P G  +ASGS+D  +++W    KG    +R H+  VR + F  DG+   +A+DD T+K
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172

Query: 748 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 927
           +W     K +     H   V   +F P+  L+ S S D+T++ WD    + V       G
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232

Query: 928 FVTYVDFHPSGTCVAAAGMDN 990
            V  V F+P G C+ +   D+
Sbjct: 233 PVRSVLFNPDGCCLYSGCQDS 253



 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 48/160 (30%), Positives = 77/160 (48%)
 Frame = +1

Query: 382 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
           E   + R   GH+  +  +DF    + +ASGS D+ + +W ++ +   +R+ GH  AV C
Sbjct: 93  EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152

Query: 562 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
           + FSP G  LAS + D TV++W        + F  HT  V  V F  +     + S D+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212

Query: 742 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDD 861
           I+ W   + + +  +      VR   F+PDG  + S   D
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 54,784,342
Number of extensions: 1662464
Number of successful extensions: 11443
Number of sequences better than 1.0e-05: 261
Number of HSP's gapped: 9064
Number of HSP's successfully gapped: 824
Length of query: 418
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 313
Effective length of database: 15,374,224
Effective search space: 4812132112
Effective search space used: 4812132112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008999
         (1255 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003132294.2| PREDICTED: POC1 centriolar protein homolog A...   607   e-174
Alignment   gi|XP_003360782.1| PREDICTED: POC1 centriolar protein homolog B...   361   e-100
Alignment   gi|XP_003353752.1| PREDICTED: WD repeat-containing protein 5 [S...   148   7e-36
Alignment   gi|NP_999415.1| platelet-activating factor acetylhydrolase IB s...   145   4e-35
Alignment   gi|XP_003358840.1| PREDICTED: WD repeat-containing protein 5B-l...   145   6e-35
Alignment   gi|XP_003356314.1| PREDICTED: u5 small nuclear ribonucleoprotei...   124   1e-28
Alignment   gi|NP_999497.1| guanine nucleotide-binding protein subunit beta...   119   3e-27
Alignment   gi|XP_003362067.1| PREDICTED: f-box/WD repeat-containing protei...   118   8e-27
Alignment   gi|XP_003362066.1| PREDICTED: f-box/WD repeat-containing protei...   118   8e-27
Alignment   gi|XP_003362065.1| PREDICTED: f-box/WD repeat-containing protei...   118   8e-27

>ref|XP_003132294.2| PREDICTED: POC1 centriolar protein homolog A-like [Sus scrofa].
          Length = 344

 Score =  607 bits (1564), Expect = e-174
 Identities = 291/294 (98%), Positives = 291/294 (98%)
 Frame = +1

Query: 373  PYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 552
            PYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA
Sbjct: 4    PYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 63

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 732
            VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD
Sbjct: 64   VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123

Query: 733  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
            DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY
Sbjct: 124  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 183

Query: 913  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
            CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY
Sbjct: 184  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 243

Query: 1093 LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            LVTASSDSTLKILDLMEGRLLYTLHGHQGPATT  FSRTGEYFAS GSDEQVMV
Sbjct: 244  LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|XP_003360782.1| PREDICTED: POC1 centriolar protein homolog B-like, partial [Sus
            scrofa].
          Length = 416

 Score =  361 bits (926), Expect = e-100
 Identities = 162/262 (61%), Positives = 213/262 (81%)
 Frame = +1

Query: 469  SGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGE 648
            +GS D+ LM+W  KPQ+RA+R+ GHKD VT V FSP G+LLAS SRD+TVR+W+P+ +G+
Sbjct: 80   TGSWDTFLMLWSFKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGK 139

Query: 649  STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSP 828
            S+ F+AHTA VRSV F +DGQ   TAS+DK+I     HRQ+FL+SL +H +WVRCAKFSP
Sbjct: 140  SSEFKAHTAPVRSVDFSADGQFLATASEDKSIXXXXXHRQRFLYSLYRHTHWVRCAKFSP 199

Query: 829  DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWD 1008
            DGRLIVS S+DKT+K+WD T+++CV+++ +  GF  +VDF+P+GTC+A+AG D+TVK+WD
Sbjct: 200  DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVDFNPNGTCIASAGSDHTVKIWD 259

Query: 1009 VRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAT 1188
            +R ++LLQHYQ+HS  VN +SFHPSGNYL+TASSD TLKILDL+EGRL+YTL GH GP  
Sbjct: 260  IRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF 319

Query: 1189 TRGFSRTGEYFASEGSDEQVMV 1254
            T  FS+ GE F S G+D QV++
Sbjct: 320  TVSFSKGGELFTSGGADAQVLL 341



 Score =  142 bits (359), Expect = 3e-34
 Identities = 79/237 (33%), Positives = 117/237 (49%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            + GH+D VT V FS     LAS S D  + +W    + ++  F  H   V  V+FS  G 
Sbjct: 101  YVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ 160

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
             LA+ S DK++     + +        HT  VR   F  DG+  V+ S+DKTIK+W T  
Sbjct: 161  FLATASEDKSIXXXXXHRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 220

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
            ++ + + S  + +     F+P+G  I SA  D TVK+WD    + +  Y  H G V  V 
Sbjct: 221  KQCVNNFSDFVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 280

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
            FHPSG  +  A  D T+K+ D+   RL+   Q H+  V  +SF   G    +  +D+
Sbjct: 281  FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADA 337



 Score =  107 bits (266), Expect = 2e-23
 Identities = 64/209 (30%), Positives = 86/209 (41%)
 Frame = +1

Query: 379  PEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 558
            P+       FK H   V  VDFS + + LA+ S D  +       Q   Y    H   V 
Sbjct: 134  PDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIXXXXXHRQRFLYSLYRHTHWVR 193

Query: 559  CVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 738
            C  FSP G L+ S S DKT++IW    K     F         V F  +G    +A  D 
Sbjct: 194  CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVDFNPNGTCIASAGSDH 253

Query: 739  TIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 918
            T+K+W     K L     H   V C  F P G  +++AS D T+K+ D      +++   
Sbjct: 254  TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 313

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVW 1005
            H G V  V F   G    + G D  V +W
Sbjct: 314  HTGPVFTVSFSKGGELFTSGGADAQVLLW 342



 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 40/140 (28%), Positives = 60/140 (42%)
 Frame = +1

Query: 835  RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            RL  + S D  + LW    +     Y  H   VT V F P G  +A+A  D TV++W   
Sbjct: 76   RLPTTGSWDTFLMLWSFKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPD 135

Query: 1015 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTR 1194
                   ++ H+A V ++ F   G +L TAS D ++        R LY+L+ H       
Sbjct: 136  KRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIXXXXXHRQRFLYSLYRHTHWVRCA 195

Query: 1195 GFSRTGEYFASEGSDEQVMV 1254
             FS  G    S   D+ + +
Sbjct: 196  KFSPDGRLIVSCSEDKTIKI 215



 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
 Frame = +1

Query: 436 VDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKT 615
           VDF+ N   +AS   D  + +W ++       +  H   V CV+F PSG+ L + S D T
Sbjct: 237 VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 296

Query: 616 VRIWVPNIKGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 762
           ++I +  ++G      + HT  V +V F   G+ F +   D  + +W T+
Sbjct: 297 LKI-LDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTN 345


>ref|XP_003353752.1| PREDICTED: WD repeat-containing protein 5 [Sus scrofa].
          Length = 334

 Score =  148 bits (373), Expect = 7e-36
 Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 6/249 (2%)
 Frame = +1

Query: 523  AYRFT--GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVH 693
            A +FT  GH  AV+ V FSP+G  LAS S DK ++IW   + K E T+   H   +  V 
Sbjct: 36   ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVA 94

Query: 694  FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 873
            + SD    V+ASDDKT+K+W     K L +L  H N+V C  F+P   LIVS S D++V+
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154

Query: 874  LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY-QLHS 1050
            +WD  + +C+ +   H   V+ V F+  G+ + ++  D   ++WD  + + L+      +
Sbjct: 155  IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214

Query: 1051 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFA 1224
              V+ + F P+G Y++ A+ D+TLK+ D  +G+ L T  GH+         FS TG  + 
Sbjct: 215  PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274

Query: 1225 SEGSDEQVM 1251
              GS++ ++
Sbjct: 275  VSGSEDNLV 283



 Score =  134 bits (337), Expect = 1e-31
 Identities = 79/254 (31%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+   GH+  ++ V +S +   L S S D  L +W +          GH + V C 
Sbjct: 76   DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            NF+P  +L+ SGS D++VRIW            AH+  V +VHF  DG   V++S D   
Sbjct: 136  NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W T   + L +L    N  V   KFSP+G+ I++A+ D T+KLWD +  +C+ +Y  H
Sbjct: 196  RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255

Query: 922  GG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  + +F    G  + +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 256  KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 316  IASAALENDKTIKL 329



 Score =  128 bits (322), Expect = 6e-30
 Identities = 83/273 (30%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
 Frame = +1

Query: 373  PYPEDPSLERHFK--GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHK 546
            P P  P+    F   GH  AV+ V FS N + LAS S D  + +W           +GHK
Sbjct: 28   PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 87

Query: 547  DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 726
              ++ V +S   +LL S S DKT++IW  +        + H+  V   +F       V+ 
Sbjct: 88   LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 727  SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 906
            S D+++++W     K L +L  H + V    F+ DG LIVS+S D   ++WD  S +C+ 
Sbjct: 148  SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207

Query: 907  SYCEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS 1083
            +  +     V++V F P+G  + AA +DNT+K+WD    + L+ Y  H      +  + S
Sbjct: 208  TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 267

Query: 1084 ---GNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
               G ++V+ S D+ + I +L    ++  L GH
Sbjct: 268  VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300



 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 33/112 (29%), Positives = 52/112 (46%)
 Frame = +1

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            H   V+ V F P+G  +A++  D  +K+W     +  +    H   ++ +++    N LV
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            +AS D TLKI D+  G+ L TL GH        F+       S   DE V +
Sbjct: 104  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155


>ref|NP_999415.1| platelet-activating factor acetylhydrolase IB subunit alpha [Sus
            scrofa].
          Length = 410

 Score =  145 bits (367), Expect = 4e-35
 Identities = 90/303 (29%), Positives = 139/303 (45%), Gaps = 22/303 (7%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  VT V F      + S S D+ + VW  +         GH D+V  ++F  SG LL
Sbjct: 106  GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165

Query: 592  ASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            AS S D T+++W  + +G   +     H   V SV    +G   V+A+ DKTIK+W    
Sbjct: 166  ASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT 223

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
               + + + H  WVR  + + DG LI S S+D+TV++W   ++EC     EH   V  + 
Sbjct: 224  GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 946  FHPS--------------------GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 1065
            + P                     G  + +   D T+K+WDV T   L     H   V  
Sbjct: 284  WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 1066 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQ 1245
            + FH  G ++++ + D TL++ D    R + TL+ H+   T+  F +T  Y  +   D+ 
Sbjct: 344  VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403

Query: 1246 VMV 1254
            V V
Sbjct: 404  VKV 406



 Score =  138 bits (347), Expect = 7e-33
 Identities = 79/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            E    ER  KGH D+V  + F  + K LAS S D  + +W  +         GH   V+ 
Sbjct: 138  ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V   P+G  + S +RDKT+++W          F  H   VR V    DG    + S+D+T
Sbjct: 198  VAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPD--------------------GRLIVSASDD 861
            ++VW    ++    L +H + V C  ++P+                    G  ++S S D
Sbjct: 258  VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 862  KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ 1041
            KT+K+WD ++  C+ +   H  +V  V FH  G  + +   D T++VWD +  R ++   
Sbjct: 318  KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 1042 LHSAAVNALSFHPSGNYLVTASSDSTLKI 1128
             H   V +L FH +  Y+VT S D T+K+
Sbjct: 378  AHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406



 Score =  124 bits (310), Expect = 1e-28
 Identities = 71/225 (31%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R   GH   V+ V    N   + S + D  + +W ++       FTGH++ V  V  +  
Sbjct: 186  RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD------------------ 705
            G L+AS S D+TVR+WV   K      R H   V  + +  +                  
Sbjct: 246  GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 706  --GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
              G   ++ S DKTIK+W       L +L  H NWVR   F   G+ I+S +DDKT+++W
Sbjct: 306  KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 880  DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            D  ++ C+ +   H  FVT +DFH +   V    +D TVKVW+ R
Sbjct: 366  DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  121 bits (304), Expect = 7e-28
 Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
 Frame = +1

Query: 499  WHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTAT 678
            W  +P  + Y  +GH+  VT V F P   ++ S S D T+++W           + HT +
Sbjct: 94   WIPRPPEK-YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152

Query: 679  VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 858
            V+ + F   G+   + S D TIK+W     + + ++  H + V      P+G  IVSA+ 
Sbjct: 153  VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAAR 212

Query: 859  DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY 1038
            DKT+K+W+  +  CV ++  H  +V  V  +  GT +A+   D TV+VW V T       
Sbjct: 213  DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272

Query: 1039 QLHSAAVNALSFHPSGNY--------------------LVTASSDSTLKILDLMEGRLLY 1158
            + H   V  +S+ P  +Y                    L++ S D T+K+ D+  G  L 
Sbjct: 273  REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332

Query: 1159 TLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TL GH        F   G++  S   D+ + V
Sbjct: 333  TLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364


>ref|XP_003358840.1| PREDICTED: WD repeat-containing protein 5B-like [Sus scrofa].
          Length = 330

 Score =  145 bits (365), Expect = 6e-35
 Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
 Frame = +1

Query: 526  YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD 705
            +   GH +AV+ V FSP+G  LAS S DK + IW           + H+  +  V + SD
Sbjct: 35   FTLVGHTEAVSSVKFSPNGEWLASSSADKVIIIWGAYDGKYEKALKGHSLEISDVAWSSD 94

Query: 706  GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 885
                V+ASDDKT+K+W     K L +L  H N+V C  F+P   LI+S S D++VK+W+ 
Sbjct: 95   SGRLVSASDDKTLKIWDVRVGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDESVKIWEV 154

Query: 886  TSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH-YQLHSAAVN 1062
             +  C+ +   H   V+ V F+  G+ + +   D   ++WD  + + L+      +  ++
Sbjct: 155  KTGRCLKTLSAHSDPVSAVHFNCKGSLIVSGSYDGVCRIWDAASGQCLKTLVDDDNPPIS 214

Query: 1063 ALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFASEGS 1236
             + F P+G Y++ A+ D+TLK+ D   GR L T  GH+         FS T   +   GS
Sbjct: 215  FVKFSPNGKYILIATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTSGKWIVSGS 274

Query: 1237 DEQVM 1251
            ++ ++
Sbjct: 275  EDNLV 279



 Score =  128 bits (321), Expect = 8e-30
 Identities = 77/254 (30%), Positives = 130/254 (51%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+  KGH   ++ V +S +  +L S S D  L +W ++         GH + V C 
Sbjct: 72   DGKYEKALKGHSLEISDVAWSSDSGRLVSASDDKTLKIWDVRVGKCLKTLKGHSNYVFCC 131

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            NF+P  +L+ SGS D++V+IW            AH+  V +VHF   G   V+ S D   
Sbjct: 132  NFNPPSNLIISGSFDESVKIWEVKTGRCLKTLSAHSDPVSAVHFNCKGSLIVSGSYDGVC 191

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W     + L +L    N  +   KFSP+G+ I+ A+ D T+KLWD +   C+ +Y  H
Sbjct: 192  RIWDAASGQCLKTLVDDDNPPISFVKFSPNGKYILIATLDNTLKLWDYSRGRCLKTYTGH 251

Query: 922  GG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  + +F   SG  + +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 252  KNEKYCIFANFSVTSGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENI 311

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 312  IASAALGNDKTVKL 325



 Score =  123 bits (309), Expect = 2e-28
 Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GH +AV+ V FS N + LAS S D  +++W            GH   ++ V +S     L
Sbjct: 39   GHTEAVSSVKFSPNGEWLASSSADKVIIIWGAYDGKYEKALKGHSLEISDVAWSSDSGRL 98

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
             S S DKT++IW   +       + H+  V   +F       ++ S D+++K+W     +
Sbjct: 99   VSASDDKTLKIWDVRVGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDESVKIWEVKTGR 158

Query: 772  FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG-FVTYVDF 948
             L +LS H + V    F+  G LIVS S D   ++WD  S +C+ +  +     +++V F
Sbjct: 159  CLKTLSAHSDPVSAVHFNCKGSLIVSGSYDGVCRIWDAASGQCLKTLVDDDNPPISFVKF 218

Query: 949  HPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLH---SAAVNALSFHPSGNYLVTASSDST 1119
             P+G  +  A +DNT+K+WD    R L+ Y  H      + A     SG ++V+ S D+ 
Sbjct: 219  SPNGKYILIATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTSGKWIVSGSEDNL 278

Query: 1120 LKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASE--GSDEQV 1248
            + I +L    ++  L GH     +     T    AS   G+D+ V
Sbjct: 279  VYIWNLQTKEIVQKLQGHTDVVISAACHPTENIIASAALGNDKTV 323



 Score =  112 bits (279), Expect = 6e-25
 Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
 Frame = +1

Query: 577  SGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWS 756
            +G  L+S +         PN   + T+   HT  V SV F  +G+   ++S DK I +W 
Sbjct: 11   AGSALSSSANQSKQVAEKPNYTLKFTLV-GHTEAVSSVKFSPNGEWLASSSADKVIIIWG 69

Query: 757  THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 936
             +  K+  +L  H   +    +S D   +VSASDDKT+K+WD    +C+ +   H  +V 
Sbjct: 70   AYDGKYEKALKGHSLEISDVAWSSDSGRLVSASDDKTLKIWDVRVGKCLKTLKGHSNYVF 129

Query: 937  YVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
              +F+P    + +   D +VK+W+V+T R L+    HS  V+A+ F+  G+ +V+ S D 
Sbjct: 130  CCNFNPPSNLIISGSFDESVKIWEVKTGRCLKTLSAHSDPVSAVHFNCKGSLIVSGSYDG 189

Query: 1117 TLKILDLMEGRLLYTLHGHQGPATT-RGFSRTGEY 1218
              +I D   G+ L TL     P  +   FS  G+Y
Sbjct: 190  VCRIWDAASGQCLKTLVDDDNPPISFVKFSPNGKY 224



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 49/206 (23%)
 Frame = +1

Query: 409 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 588
           KGH + V C +F+     + SGS D  + +W +K        + H D V+ V+F+  G L
Sbjct: 122 KGHSNYVFCCNFNPPSNLIISGSFDESVKIWEVKTGRCLKTLSAHSDPVSAVHFNCKGSL 181

Query: 589 LASGSRDKTVRIWVPNIKGE--STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 762
           + SGS D   RIW     G+   T+       +  V F  +G+  + A+ D T+K+W   
Sbjct: 182 IVSGSYDGVCRIW-DAASGQCLKTLVDDDNPPISFVKFSPNGKYILIATLDNTLKLWDYS 240

Query: 763 RQKFLFSLSQHINWVRC--AKFS-PDGRLIVSASDD------------------------ 861
           R + L + + H N   C  A FS   G+ IVS S+D                        
Sbjct: 241 RGRCLKTYTGHKNEKYCIFANFSVTSGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 300

Query: 862 --------------------KTVKLW 879
                               KTVKLW
Sbjct: 301 ISAACHPTENIIASAALGNDKTVKLW 326



 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 35/137 (25%), Positives = 65/137 (47%)
 Frame = +1

Query: 844  VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHR 1023
            +S+S +++ ++ +K +     +   H   V+ V F P+G  +A++  D  + +W     +
Sbjct: 15   LSSSANQSKQVAEKPNYTLKFTLVGHTEAVSSVKFSPNGEWLASSSADKVIIIWGAYDGK 74

Query: 1024 LLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFS 1203
              +  + HS  ++ +++      LV+AS D TLKI D+  G+ L TL GH        F+
Sbjct: 75   YEKALKGHSLEISDVAWSSDSGRLVSASDDKTLKIWDVRVGKCLKTLKGHSNYVFCCNFN 134

Query: 1204 RTGEYFASEGSDEQVMV 1254
                   S   DE V +
Sbjct: 135  PPSNLIISGSFDESVKI 151



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
 Frame = +1

Query: 406 FKGHRDAVTCVDFSFNM---KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 576
           + GH++   C+  +F++   K + SGS D+ + +W+++ +    +  GH D V      P
Sbjct: 248 YTGHKNEKYCIFANFSVTSGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHP 307

Query: 577 SGHLLASGS--RDKTVRIWVPN 636
           + +++AS +   DKTV++W+ N
Sbjct: 308 TENIIASAALGNDKTVKLWMSN 329


>ref|XP_003356314.1| PREDICTED: u5 small nuclear ribonucleoprotein 40 kDa protein-like
            [Sus scrofa].
          Length = 358

 Score =  124 bits (310), Expect = 1e-28
 Identities = 85/289 (29%), Positives = 130/289 (44%), Gaps = 10/289 (3%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHL 588
            GH   V C  F  N   LAS   D  +++W++      Y    GH  AV  ++++  G +
Sbjct: 65   GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124

Query: 589  LASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFV-TASDDKTIKVWSTHR 765
            L S S DKTV +W           + HT+ V S +    G   V T SDD T+K+W   R
Sbjct: 125  LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI-R 183

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
            +K      Q+   V    F+     I+S   D  +K+WD    +  ++   H   VT + 
Sbjct: 184  KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243

Query: 946  FHPSGTCVAAAGMDNTVKVWDVR----THRLLQHYQ--LHSAAVNAL--SFHPSGNYLVT 1101
                G+ + +  MDNTV+VWDVR      R ++ +Q  +H+   N L  S+ P G+ +  
Sbjct: 244  LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAA 303

Query: 1102 ASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQV 1248
             S+D  + + D    R+LY L GH G      F        S  SD+++
Sbjct: 304  GSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352



 Score =  116 bits (291), Expect = 2e-26
 Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
 Frame = +1

Query: 535  TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGES---TVFRAHTATVRSVHFCSD 705
            +GH+  V C  F P+G  LAS   D+ + +W  N+ G+       + H+  V  +H+ +D
Sbjct: 64   SGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELHYNTD 121

Query: 706  GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVR-CAKFSPDGRLIVSASDDKTVKLWD 882
            G    +AS DKT+ VW +   + +  L  H ++V  C       +L+ + SDD TVKLWD
Sbjct: 122  GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181

Query: 883  KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 1062
               +  + ++ ++   V  V F+ +   + + G+DN +KVWD+R ++L    + H+ +V 
Sbjct: 182  IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240

Query: 1063 ALSFHPSGNYLVTASSDSTLKILDL 1137
             LS    G+YL++ + D+T+++ D+
Sbjct: 241  GLSLSSEGSYLLSNAMDNTVRVWDV 265



 Score =  107 bits (267), Expect = 1e-23
 Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 12/250 (4%)
 Frame = +1

Query: 409  KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAV-TCVNFSPSGH 585
            KGH  AV  + ++ +   L S S D  + VW  +   R  R  GH   V +C        
Sbjct: 107  KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ 166

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            L+ +GS D TV++W    K     F+ +T  V +V F       ++   D  IKVW   +
Sbjct: 167  LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-----------KTSRECVHSY 912
             K  +++  H + V     S +G  ++S + D TV++WD           K  +  VH++
Sbjct: 226  NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285

Query: 913  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
             ++   +    + P G+ +AA   D  V VWD  + R+L     H+ ++N ++FHP    
Sbjct: 286  EKN---LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPI 342

Query: 1093 LVTASSDSTL 1122
            +++ASSD  L
Sbjct: 343  ILSASSDKRL 352



 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
 Frame = +1

Query: 667  HTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFS-LSQHINWVRCAKFSPDGRLI 843
            H   V    F  +G +  +A  D+ I +W+ +     ++ L  H   V    ++ DG ++
Sbjct: 66   HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125

Query: 844  VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDN-TVKVWDVRTH 1020
             SAS DKTV +WD  + E V     H  FV        G  +   G D+ TVK+WD+R  
Sbjct: 126  FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK 185

Query: 1021 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGF 1200
              +Q +Q ++  V A++F+ + + +++   D+ +K+ DL + +L YT+ GH    T    
Sbjct: 186  AAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 244

Query: 1201 SRTGEYFASEGSDEQVMV 1254
            S  G Y  S   D  V V
Sbjct: 245  SSEGSYLLSNAMDNTVRV 262


>ref|NP_999497.1| guanine nucleotide-binding protein subunit beta-2-like 1 [Sus
            scrofa].
          Length = 317

 Score =  119 bits (299), Expect = 3e-27
 Identities = 85/268 (31%), Positives = 128/268 (47%), Gaps = 10/268 (3%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLA-SGSMDSCLMVWHMKPQSRAY-----RFTGH 543
            E  +L    KGH   VT +  +     +  S S D  +++W +      Y        GH
Sbjct: 3    EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH 62

Query: 544  KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVT 723
               V+ V  S  G    SGS D T+R+W       +  F  HT  V SV F SD +  V+
Sbjct: 63   SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122

Query: 724  ASDDKTIKVWSTHRQ-KFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSR 894
             S DKTIK+W+T    K+      H  WV C +FSP+    +IVS   DK VK+W+  + 
Sbjct: 123  GSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 182

Query: 895  ECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSA-AVNALS 1071
            +   ++  H G++  V   P G+  A+ G D    +WD+   + L  Y L     +NAL 
Sbjct: 183  KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL--YTLDGGDIINALC 240

Query: 1072 FHPSGNYLVTASSDSTLKILDLMEGRLL 1155
            F P+  Y + A++  ++KI DL EG+++
Sbjct: 241  FSPN-RYWLCAATGPSIKIWDL-EGKII 266



 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
 Frame = +1

Query: 538  GHKDAVTCVNFSPS-GHLLASGSRDKTVRIWV-----PNIKGESTVFRAHTATVRSVHFC 699
            GH   VT +  +P    ++ S SRDKT+ +W       N        R H+  V  V   
Sbjct: 13   GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72

Query: 700  SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
            SDGQ  ++ S D T+++W             H   V    FS D R IVS S DKT+KLW
Sbjct: 73   SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLW 132

Query: 880  DKTSRECVHSYCE--HGGFVTYVDFHP--SGTCVAAAGMDNTVKVWDVRTHRLLQHYQLH 1047
            + T   C ++  +  H  +V+ V F P  S   + + G D  VKVW++   +L  ++  H
Sbjct: 133  N-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGH 191

Query: 1048 SAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 1170
            +  +N ++  P G+   +   D    + DL EG+ LYTL G
Sbjct: 192  TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232



 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
 Frame = +1

Query: 718  VTASDDKTIKVWSTHRQKFLFSLSQ-----HINWVRCAKFSPDGRLIVSASDDKTVKLWD 882
            ++AS DKTI +W   R +  + + Q     H ++V     S DG+  +S S D T++LWD
Sbjct: 32   LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91

Query: 883  KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWD-VRTHRLLQHYQLHSAAV 1059
             T+      +  H   V  V F      + +   D T+K+W+ +   +     + HS  V
Sbjct: 92   LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151

Query: 1060 NALSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEG 1233
            + + F P+ +   +V+   D  +K+ +L   +L     GH G   T   S  G   AS G
Sbjct: 152  SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 211

Query: 1234 SDEQVMV 1254
             D Q M+
Sbjct: 212  KDGQAML 218



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 49/216 (22%), Positives = 81/216 (37%), Gaps = 53/216 (24%)
 Frame = +1

Query: 400 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSR-AYRFTGHKDAVTCVNFSP 576
           R F GH   V  V FS + +Q+ SGS D  + +W+     +   +   H + V+CV FSP
Sbjct: 99  RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 158

Query: 577 --SGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK 747
             S  ++ S   DK V++W + N K ++     HT  + +V    DG    +   D    
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAM 217

Query: 748 VWSTHRQKFLFSL-----------SQHINWVRCAK------------------------- 819
           +W  +  K L++L           S +  W+  A                          
Sbjct: 218 LWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVIST 277

Query: 820 -------------FSPDGRLIVSASDDKTVKLWDKT 888
                        +S DG+ + +   D  V++W  T
Sbjct: 278 SSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 313


>ref|XP_003362067.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 3 [Sus
            scrofa].
          Length = 589

 Score =  118 bits (295), Expect = 8e-27
 Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 4/282 (1%)
 Frame = +1

Query: 409  KGHRD-AVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            KGH D  +TC           SGS D+ L VW            GH   V       +  
Sbjct: 259  KGHDDHVITCXXXXXXXXX--SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 314

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            ++ SGS D+T+++W             HT+TVR +H     +  V+ S D T++VW    
Sbjct: 315  IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIET 372

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + L  L  H+  VRC ++  DGR +VS + D  VK+WD  +  C+H+   H   V  + 
Sbjct: 373  GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 430

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F   G  V +  +D +++VWDV T   +     H +  + +      N LV+ ++DST+K
Sbjct: 431  F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 486

Query: 1126 ILDLMEGRLLYTLHG---HQGPATTRGFSRTGEYFASEGSDE 1242
            I D+  G+ L TL G   HQ   T   F++    F    SD+
Sbjct: 487  IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSSDD 525



 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GH   V C+    + K++ SGS D+ L VW ++     +   GH  AV CV +   G  +
Sbjct: 341  GHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRV 396

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
             SG+ D  V++W P  +      + HT  V S+ F  DG   V+ S D +I+VW      
Sbjct: 397  VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 454

Query: 772  FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC---EHGGFVTYV 942
             + +L+ H +     +   +  ++VS + D TVK+WD  + +C+ +     +H   VT +
Sbjct: 455  CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 512

Query: 943  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH 1035
             F+ +   V  +  D TVK+WD++T   +++
Sbjct: 513  QFNKN--FVITSSDDGTVKLWDLKTGEFIRN 541


>ref|XP_003362066.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 2 [Sus
            scrofa].
          Length = 705

 Score =  118 bits (295), Expect = 8e-27
 Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 4/282 (1%)
 Frame = +1

Query: 409  KGHRD-AVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            KGH D  +TC           SGS D+ L VW            GH   V       +  
Sbjct: 375  KGHDDHVITCXXXXXXXXX--SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 430

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            ++ SGS D+T+++W             HT+TVR +H     +  V+ S D T++VW    
Sbjct: 431  IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIET 488

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + L  L  H+  VRC ++  DGR +VS + D  VK+WD  +  C+H+   H   V  + 
Sbjct: 489  GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 546

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F   G  V +  +D +++VWDV T   +     H +  + +      N LV+ ++DST+K
Sbjct: 547  F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 602

Query: 1126 ILDLMEGRLLYTLHG---HQGPATTRGFSRTGEYFASEGSDE 1242
            I D+  G+ L TL G   HQ   T   F++    F    SD+
Sbjct: 603  IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSSDD 641



 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GH   V C+    + K++ SGS D+ L VW ++     +   GH  AV CV +   G  +
Sbjct: 457  GHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRV 512

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
             SG+ D  V++W P  +      + HT  V S+ F  DG   V+ S D +I+VW      
Sbjct: 513  VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 570

Query: 772  FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC---EHGGFVTYV 942
             + +L+ H +     +   +  ++VS + D TVK+WD  + +C+ +     +H   VT +
Sbjct: 571  CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 628

Query: 943  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH 1035
             F+ +   V  +  D TVK+WD++T   +++
Sbjct: 629  QFNKN--FVITSSDDGTVKLWDLKTGEFIRN 657


>ref|XP_003362065.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 1 [Sus
            scrofa].
          Length = 627

 Score =  118 bits (295), Expect = 8e-27
 Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 4/282 (1%)
 Frame = +1

Query: 409  KGHRD-AVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            KGH D  +TC           SGS D+ L VW            GH   V       +  
Sbjct: 297  KGHDDHVITCXXXXXXXXX--SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 352

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            ++ SGS D+T+++W             HT+TVR +H     +  V+ S D T++VW    
Sbjct: 353  IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIET 410

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + L  L  H+  VRC ++  DGR +VS + D  VK+WD  +  C+H+   H   V  + 
Sbjct: 411  GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F   G  V +  +D +++VWDV T   +     H +  + +      N LV+ ++DST+K
Sbjct: 469  F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 524

Query: 1126 ILDLMEGRLLYTLHG---HQGPATTRGFSRTGEYFASEGSDE 1242
            I D+  G+ L TL G   HQ   T   F++    F    SD+
Sbjct: 525  IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN---FVITSSDD 563



 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GH   V C+    + K++ SGS D+ L VW ++     +   GH  AV CV +   G  +
Sbjct: 379  GHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRV 434

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
             SG+ D  V++W P  +      + HT  V S+ F  DG   V+ S D +I+VW      
Sbjct: 435  VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 492

Query: 772  FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC---EHGGFVTYV 942
             + +L+ H +     +   +  ++VS + D TVK+WD  + +C+ +     +H   VT +
Sbjct: 493  CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 550

Query: 943  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH 1035
             F+ +   V  +  D TVK+WD++T   +++
Sbjct: 551  QFNKN--FVITSSDDGTVKLWDLKTGEFIRN 579


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,880,725
Number of extensions: 1037128
Number of successful extensions: 6696
Number of sequences better than 1.0e-05: 146
Number of HSP's gapped: 5373
Number of HSP's successfully gapped: 459
Length of query: 418
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 316
Effective length of database: 8,804,438
Effective search space: 2782202408
Effective search space used: 2782202408
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008999
         (1255 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_081630.2| POC1 centriolar protein homolog A [Mus musculus].    581   e-166
Alignment   gi|NP_082016.1| POC1 centriolar protein homolog B [Mus musculus].    392   e-109
Alignment   gi|NP_543124.1| WD repeat-containing protein 5 [Mus musculus].       148   1e-35
Alignment   gi|NP_038653.1| platelet-activating factor acetylhydrolase IB s...   147   2e-35
Alignment   gi|NP_081389.1| WD repeat-containing protein 5B [Mus musculus].      143   2e-34
Alignment   gi|NP_083081.2| katanin p80 WD40-containing subunit B1 [Mus mus...   127   2e-29
Alignment   gi|NP_083963.1| WD repeat-containing protein 38 [Mus musculus].      126   3e-29
Alignment   gi|NP_536353.2| F-box/WD repeat-containing protein 7 isoform 2 ...   126   4e-29
Alignment   gi|NP_001171245.1| F-box/WD repeat-containing protein 7 isoform...   126   4e-29
Alignment   gi|NP_001171244.1| F-box/WD repeat-containing protein 7 isoform...   126   4e-29

>ref|NP_081630.2| POC1 centriolar protein homolog A [Mus musculus].
          Length = 405

 Score =  581 bits (1498), Expect = e-166
 Identities = 275/294 (93%), Positives = 283/294 (96%)
 Frame = +1

Query: 373  PYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 552
            P  EDPSLERHFKGHRDAVTCVDFS N K LASGSMDS LM+WHMKPQSRAYRFTGHKDA
Sbjct: 4    PSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDA 63

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 732
            VTCVNFSPSGHLLASGSRDKTVRIWVPN+KGESTVFRAHTATVRSVHFCSDGQS VTASD
Sbjct: 64   VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASD 123

Query: 733  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
            DKT+KVWSTHRQ+FLFSL+QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC+HSY
Sbjct: 124  DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSY 183

Query: 913  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
            CEHGGFVTYVDFHPSGTC+AAAGMDNTVKVWD RTHRLLQHYQLHSAAVNALSFHPSGNY
Sbjct: 184  CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNY 243

Query: 1093 LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            L+TASSDSTLKILDLMEGRLLYTLHGHQGPATT  FSRTGEYFAS GSDEQVMV
Sbjct: 244  LITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|NP_082016.1| POC1 centriolar protein homolog B [Mus musculus].
          Length = 476

 Score =  392 bits (1008), Expect = e-109
 Identities = 180/291 (61%), Positives = 233/291 (80%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            EDP LER FKGH+ A+T  DFS N KQ+A+ S D+ LM+W +KP +RAYR+ GHKD VT 
Sbjct: 6    EDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            + FSP G+LLAS SRD+TVR+WV + KG+S+ F+AHTA VRSV F +DGQ  VTAS+DK+
Sbjct: 66   LQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKS 125

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            IKVWS  RQ+FL+SL +H +WVRCAKFSPDGRLIVS S+DKT+K+WD T+++CV+++ + 
Sbjct: 126  IKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185

Query: 922  GGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 1101
             GF  +VDF+P+GTC+A+AG D+ VK+WD+R ++LLQHYQ+HS  VN LSFHP GN LVT
Sbjct: 186  VGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVT 245

Query: 1102 ASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            ASSD T+K+LDL+EGRL+YTL GH GP  T  FS+ GE   S G+D QV++
Sbjct: 246  ASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLI 296



 Score =  112 bits (281), Expect = 5e-25
 Identities = 73/230 (31%), Positives = 98/230 (42%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            FK H   V  VDFS + + L + S D  + VW M  Q   Y    H   V C  FSP G 
Sbjct: 98   FKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGR 157

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            L+ S S DKT++IW    K     F         V F  +G    +A  D  +K+W    
Sbjct: 158  LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRM 217

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             K L     H   V C  F P G  +V+AS D TVK+ D      +++   H G V  V 
Sbjct: 218  NKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVS 277

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYL 1095
            F   G  + + G D  V +W  RT+ +  H +     +  L F  S + L
Sbjct: 278  FSKDGELLTSGGADAQVLIW--RTNFIHLHCKDPKRNLKRLHFEASPHLL 325


>ref|NP_543124.1| WD repeat-containing protein 5 [Mus musculus].
          Length = 334

 Score =  148 bits (373), Expect = 1e-35
 Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 6/249 (2%)
 Frame = +1

Query: 523  AYRFT--GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVH 693
            A +FT  GH  AV+ V FSP+G  LAS S DK ++IW   + K E T+   H   +  V 
Sbjct: 36   ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVA 94

Query: 694  FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 873
            + SD    V+ASDDKT+K+W     K L +L  H N+V C  F+P   LIVS S D++V+
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154

Query: 874  LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY-QLHS 1050
            +WD  + +C+ +   H   V+ V F+  G+ + ++  D   ++WD  + + L+      +
Sbjct: 155  IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214

Query: 1051 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFA 1224
              V+ + F P+G Y++ A+ D+TLK+ D  +G+ L T  GH+         FS TG  + 
Sbjct: 215  PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274

Query: 1225 SEGSDEQVM 1251
              GS++ ++
Sbjct: 275  VSGSEDNLV 283



 Score =  134 bits (337), Expect = 1e-31
 Identities = 79/254 (31%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+   GH+  ++ V +S +   L S S D  L +W +          GH + V C 
Sbjct: 76   DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            NF+P  +L+ SGS D++VRIW            AH+  V +VHF  DG   V++S D   
Sbjct: 136  NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W T   + L +L    N  V   KFSP+G+ I++A+ D T+KLWD +  +C+ +Y  H
Sbjct: 196  RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255

Query: 922  GG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  + +F    G  + +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 256  KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 316  IASAALENDKTIKL 329



 Score =  128 bits (322), Expect = 8e-30
 Identities = 83/273 (30%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
 Frame = +1

Query: 373  PYPEDPSLERHFK--GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHK 546
            P P  P+    F   GH  AV+ V FS N + LAS S D  + +W           +GHK
Sbjct: 28   PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 87

Query: 547  DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 726
              ++ V +S   +LL S S DKT++IW  +        + H+  V   +F       V+ 
Sbjct: 88   LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 727  SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 906
            S D+++++W     K L +L  H + V    F+ DG LIVS+S D   ++WD  S +C+ 
Sbjct: 148  SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207

Query: 907  SYCEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS 1083
            +  +     V++V F P+G  + AA +DNT+K+WD    + L+ Y  H      +  + S
Sbjct: 208  TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 267

Query: 1084 ---GNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
               G ++V+ S D+ + I +L    ++  L GH
Sbjct: 268  VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 33/112 (29%), Positives = 52/112 (46%)
 Frame = +1

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            H   V+ V F P+G  +A++  D  +K+W     +  +    H   ++ +++    N LV
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            +AS D TLKI D+  G+ L TL GH        F+       S   DE V +
Sbjct: 104  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155


>ref|NP_038653.1| platelet-activating factor acetylhydrolase IB subunit alpha [Mus
            musculus].
          Length = 410

 Score =  147 bits (370), Expect = 2e-35
 Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 22/303 (7%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  VT V F      + S S D+ + VW  +         GH D+V  ++F  SG LL
Sbjct: 106  GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165

Query: 592  ASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            AS S D T+++W  + +G   +     H   V SV    +G   V+AS DKTIK+W    
Sbjct: 166  ASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
               + + + H  WVR  + + DG LI S S+D+TV++W   ++EC     EH   V  + 
Sbjct: 224  GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 946  FHPS--------------------GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 1065
            + P                     G  + +   D T+K+WDV T   L     H   V  
Sbjct: 284  WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 1066 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQ 1245
            + FH  G ++++ + D TL++ D    R + TL+ H+   T+  F +T  Y  +   D+ 
Sbjct: 344  VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403

Query: 1246 VMV 1254
            V V
Sbjct: 404  VKV 406



 Score =  139 bits (350), Expect = 5e-33
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            E    ER  KGH D+V  + F  + K LAS S D  + +W  +         GH   V+ 
Sbjct: 138  ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V   P+G  + S SRDKT+++W          F  H   VR V    DG    + S+D+T
Sbjct: 198  VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPD--------------------GRLIVSASDD 861
            ++VW    ++    L +H + V C  ++P+                    G  ++S S D
Sbjct: 258  VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 862  KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ 1041
            KT+K+WD ++  C+ +   H  +V  V FH  G  + +   D T++VWD +  R ++   
Sbjct: 318  KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 1042 LHSAAVNALSFHPSGNYLVTASSDSTLKI 1128
             H   V +L FH +  Y+VT S D T+K+
Sbjct: 378  AHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406



 Score =  125 bits (313), Expect = 9e-29
 Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R   GH   V+ V    N   + S S D  + +W ++       FTGH++ V  V  +  
Sbjct: 186  RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD------------------ 705
            G L+AS S D+TVR+WV   K      R H   V  + +  +                  
Sbjct: 246  GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 706  --GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
              G   ++ S DKTIK+W       L +L  H NWVR   F   G+ I+S +DDKT+++W
Sbjct: 306  KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 880  DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            D  ++ C+ +   H  FVT +DFH +   V    +D TVKVW+ R
Sbjct: 366  DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  122 bits (307), Expect = 5e-28
 Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
 Frame = +1

Query: 499  WHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTAT 678
            W  +P  + Y  +GH+  VT V F P   ++ S S D T+++W           + HT +
Sbjct: 94   WIPRPPEK-YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152

Query: 679  VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 858
            V+ + F   G+   + S D TIK+W     + + ++  H + V      P+G  IVSAS 
Sbjct: 153  VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212

Query: 859  DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY 1038
            DKT+K+W+  +  CV ++  H  +V  V  +  GT +A+   D TV+VW V T       
Sbjct: 213  DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272

Query: 1039 QLHSAAVNALSFHPSGNY--------------------LVTASSDSTLKILDLMEGRLLY 1158
            + H   V  +S+ P  +Y                    L++ S D T+K+ D+  G  L 
Sbjct: 273  REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332

Query: 1159 TLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TL GH        F   G++  S   D+ + V
Sbjct: 333  TLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364


>ref|NP_081389.1| WD repeat-containing protein 5B [Mus musculus].
          Length = 328

 Score =  143 bits (361), Expect = 2e-34
 Identities = 78/241 (32%), Positives = 128/241 (53%), Gaps = 3/241 (1%)
 Frame = +1

Query: 538  GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSF 717
            GH  A++ V FSP+G  LAS + D  + IW             H+  +  V + SD    
Sbjct: 37   GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRL 96

Query: 718  VTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 897
            V+ASDDKT+KVW     K L +L  H ++V C  F+P   LIVS S D++VK+W+  + +
Sbjct: 97   VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGK 156

Query: 898  CVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLH-SAAVNALSF 1074
            C+ +   H   ++ V+F+ +G+ + +   D   ++WD  + + L+      +  V+ + F
Sbjct: 157  CLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKF 216

Query: 1075 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFASEGSDEQV 1248
             P+G Y++TA+ D+TLK+ D   GR L T  GH+         FS TG  +   GS++ +
Sbjct: 217  SPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNM 276

Query: 1249 M 1251
            +
Sbjct: 277  V 277



 Score =  127 bits (319), Expect = 2e-29
 Identities = 76/254 (29%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D + ++   GH   ++ V +S +  +L S S D  L VW M+         GH D V C 
Sbjct: 70   DGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCC 129

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            +F+P  +L+ SGS D++V+IW            AH+  + +V+F  +G   V+ S D   
Sbjct: 130  DFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLC 189

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W     + L +L+   N  V   KFSP+G+ I++A+ D T+KLWD +   C+ +Y  H
Sbjct: 190  RIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGH 249

Query: 922  GG--FVTYVDFHPSG-TCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  +  F  +G   V +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 250  KNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNI 309

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 310  IASAALENDKTIKV 323



 Score =  123 bits (308), Expect = 3e-28
 Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 6/271 (2%)
 Frame = +1

Query: 379  PEDPS--LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 552
            P+ P+  L     GH  A++ V FS N + LAS + D+ +++W     +      GH   
Sbjct: 24   PQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLE 83

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 732
            ++ V +S     L S S DKT+++W           + H+  V    F       V+ S 
Sbjct: 84   ISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSF 143

Query: 733  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
            D+++K+W     K L +LS H + +    F+ +G LIVS S D   ++WD  S +C+ + 
Sbjct: 144  DESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL 203

Query: 913  CEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL--SFHPS 1083
             + G   V++V F P+G  +  A +DNT+K+WD    R L+ Y  H      L  SF  +
Sbjct: 204  ADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVT 263

Query: 1084 G-NYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
            G  ++V+ S D+ + I +L    ++  L GH
Sbjct: 264  GRKWVVSGSEDNMVYIWNLQTKEIVQRLQGH 294



 Score =  108 bits (269), Expect = 1e-23
 Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
 Frame = +1

Query: 409  KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 588
            KGH D V C DF+     + SGS D  + +W +K        + H D ++ VNF+ +G L
Sbjct: 120  KGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSL 179

Query: 589  LASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            + SGS D   RIW   + +   T+       V  V F  +G+  +TA+ D T+K+W   R
Sbjct: 180  IVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSR 239

Query: 766  QKFLFSLSQHINWVRC--AKFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 936
             + L + + H N   C  A FS  GR  +VS S+D  V +W+  ++E V     H   V 
Sbjct: 240  GRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVI 299

Query: 937  YVDFHPSGTCVAAAGMDN--TVKVW 1005
                HP+   +A+A ++N  T+KVW
Sbjct: 300  SAACHPTKNIIASAALENDKTIKVW 324



 Score = 79.0 bits (193), Expect = 7e-15
 Identities = 43/153 (28%), Positives = 75/153 (49%)
 Frame = +1

Query: 781  SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 960
            +L+ H   +   KFSP+G  + S++ D  + +W      C  +   H   ++ V +    
Sbjct: 34   TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93

Query: 961  TCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLM 1140
            + + +A  D T+KVWD+R+ + L+  + HS  V    F+P  N +V+ S D ++KI ++ 
Sbjct: 94   SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153

Query: 1141 EGRLLYTLHGHQGPATTRGFSRTGEYFASEGSD 1239
             G+ L TL  H  P +   F+  G    S   D
Sbjct: 154  TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYD 186



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 30/112 (26%), Positives = 51/112 (45%)
 Frame = +1

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            H   ++ V F P+G  +A++  D  + +W        +    HS  ++ +++    + LV
Sbjct: 38   HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV 97

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            +AS D TLK+ D+  G+ L TL GH        F+       S   DE V +
Sbjct: 98   SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149



 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
 Frame = +1

Query: 427 VTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV--NFSPSGHL-LAS 597
           V+ V FS N K + + ++D+ L +W          +TGHK+   C+  +FS +G   + S
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVS 270

Query: 598 GSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTAS---DDKTIKVWST 759
           GS D  V IW    K      + HT  V S   C   ++ + ++   +DKTIKVWS+
Sbjct: 271 GSEDNMVYIWNLQTKEIVQRLQGHTDVVISAA-CHPTKNIIASAALENDKTIKVWSS 326


>ref|NP_083081.2| katanin p80 WD40-containing subunit B1 [Mus musculus].
          Length = 658

 Score =  127 bits (318), Expect = 2e-29
 Identities = 66/218 (30%), Positives = 108/218 (49%)
 Frame = +1

Query: 463  LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK 642
            LA+G  D  + +W +   +     TGH   V  V  +    L+ +GS+  ++R+W     
Sbjct: 36   LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95

Query: 643  GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF 822
                    H A + S+ F   G+   + S D  IK+W   R+  +F    H   VRC +F
Sbjct: 96   KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155

Query: 823  SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKV 1002
            SPDG+ + SA+DD TVKLWD T+ + +  +  H G V  V+FHP+   +A+   D T++ 
Sbjct: 156  SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRF 215

Query: 1003 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
            WD+   +++   +     V ++ F+P G  L +   DS
Sbjct: 216  WDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS 253



 Score =  122 bits (307), Expect = 5e-28
 Identities = 68/212 (32%), Positives = 103/212 (48%)
 Frame = +1

Query: 577  SGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWS 756
            SG LLA+G  D  V +W  N          HT+ V SV   +  +  V  S   +I+VW 
Sbjct: 32   SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91

Query: 757  THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 936
                K L +L  H   +    F P G  + S S D  +KLWD   + CV  Y  H   V 
Sbjct: 92   LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151

Query: 937  YVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
             + F P G  +A+A  D+TVK+WD+   +++  +  H+  VN + FHP+   L + SSD 
Sbjct: 152  CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211

Query: 1117 TLKILDLMEGRLLYTLHGHQGPATTRGFSRTG 1212
            T++  DL + +++  + G  GP  +  F+  G
Sbjct: 212  TIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243



 Score =  116 bits (290), Expect = 4e-26
 Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
 Frame = +1

Query: 664  AHTATVRSVHFC-SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRL 840
            AH + V S+    + G+   T  DD  + +WS ++   + SL+ H + V   + +    L
Sbjct: 18   AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77

Query: 841  IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTH 1020
            IV+ S   ++++WD  + + + +   H   +  +DFHP G  VA+   D  +K+WD+R  
Sbjct: 78   IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137

Query: 1021 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGF 1200
              +  Y+ HS AV  L F P G +L +A+ D T+K+ DL  G+++    GH GP     F
Sbjct: 138  GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197

Query: 1201 SRTGEYFASEGSDEQVM 1251
                EY  + GS ++ +
Sbjct: 198  -HPNEYLLASGSSDRTI 213



 Score =  106 bits (264), Expect = 4e-23
 Identities = 57/201 (28%), Positives = 93/201 (46%)
 Frame = +1

Query: 388 PSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN 567
           P+      GH   V  V  +   + + +GS    + VW ++         GHK  +  ++
Sbjct: 53  PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLD 112

Query: 568 FSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK 747
           F P G  +ASGS+D  +++W    KG    +R H+  VR + F  DG+   +A+DD T+K
Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172

Query: 748 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 927
           +W     K +     H   V   +F P+  L+ S S D+T++ WD    + V       G
Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232

Query: 928 FVTYVDFHPSGTCVAAAGMDN 990
            V  V F+P G C+ +   D+
Sbjct: 233 PVRSVLFNPDGCCLYSGCQDS 253



 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 48/160 (30%), Positives = 77/160 (48%)
 Frame = +1

Query: 382 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
           E   + R   GH+  +  +DF    + +ASGS D+ + +W ++ +   +R+ GH  AV C
Sbjct: 93  EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152

Query: 562 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
           + FSP G  LAS + D TV++W        + F  HT  V  V F  +     + S D+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212

Query: 742 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDD 861
           I+ W   + + +  +      VR   F+PDG  + S   D
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD 252


>ref|NP_083963.1| WD repeat-containing protein 38 [Mus musculus].
          Length = 303

 Score =  126 bits (317), Expect = 3e-29
 Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 3/279 (1%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R +  H   V C  FS + + L + S D C+ VW  K     +R  GH+  V    FSP 
Sbjct: 20   RFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPD 79

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWST 759
            G L+AS S D ++R+W         V + H  +V +V F  D +   +   DK   VW  
Sbjct: 80   GRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEV 139

Query: 760  HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE---HGGF 930
               + +  L  H + ++ + FSP    + + S D TV +WD  +   V SY     H G 
Sbjct: 140  QSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN 199

Query: 931  VTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 1110
            ++ + +  SG  +A+   D T+ VW   T+ L    + H+  VN+L+F P    L +A  
Sbjct: 200  ISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGY 258

Query: 1111 DSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFAS 1227
              T+K+ D + G+ L TL G    A    F+  G+   S
Sbjct: 259  SRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVS 297



 Score =  112 bits (280), Expect = 6e-25
 Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 3/207 (1%)
 Frame = +1

Query: 643  GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF 822
            G    +  H   V    F  DG++ +TASDD  + VW T   + L+ L+ H   V+   F
Sbjct: 17   GRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCF 76

Query: 823  SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKV 1002
            SPDGRLI S+S D +++LWD    +C+H    H   V  V F P    +A+ G D    V
Sbjct: 77   SPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIV 136

Query: 1003 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLH---GH 1173
            W+V++ R +     H  ++ +  F P+ + L T S DST+ I DL     + + H   GH
Sbjct: 137  WEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196

Query: 1174 QGPATTRGFSRTGEYFASEGSDEQVMV 1254
             G  +   +S +G   AS   D+ + V
Sbjct: 197  TGNISCLCYSASG-LLASGSWDKTICV 222



 Score =  102 bits (254), Expect = 6e-22
 Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  V    FS + + +AS S D  + +W +      +   GH+ +V  V+FSP    L
Sbjct: 66   GHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQL 125

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
            ASG  DK   +W         +   H  +++S  F     S  T S D T+ +W      
Sbjct: 126  ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAST 185

Query: 772  FLFS---LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYV 942
             + S   L  H   + C  +S  G L+ S S DKT+ +W  T+         H  +V  +
Sbjct: 186  PVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSL 244

Query: 943  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 1110
             F P    +A+AG   TVKVWD  T + L+  +      +A  F P G  LV+ ++
Sbjct: 245  AFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGAA 300


>ref|NP_536353.2| F-box/WD repeat-containing protein 7 isoform 2 [Mus musculus].
          Length = 629

 Score =  126 bits (316), Expect = 4e-29
 Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 4/282 (1%)
 Frame = +1

Query: 409  KGHRD-AVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            KGH D  +TC+ F  N  ++ SGS D+ L VW            GH   V       +  
Sbjct: 299  KGHDDHVITCLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 354

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            ++ SGS D+T+++W             HT+TVR +H     +  V+ S D T++VW    
Sbjct: 355  IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIET 412

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + L  L  H+  VRC ++  DGR +VS + D  VK+WD  +  C+H+   H   V  + 
Sbjct: 413  GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F   G  V +  +D +++VWDV T   +     H +  + +      N LV+ ++DST+K
Sbjct: 471  F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 526

Query: 1126 ILDLMEGRLLYTLHG---HQGPATTRGFSRTGEYFASEGSDE 1242
            I D+  G+ L TL G   HQ   T   F++    F    SD+
Sbjct: 527  IWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN---FVITSSDD 565



 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GH   V C+    + K++ SGS D+ L VW ++     +   GH  AV CV +   G  +
Sbjct: 381  GHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRV 436

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
             SG+ D  V++W P  +      + HT  V S+ F  DG   V+ S D +I+VW      
Sbjct: 437  VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 494

Query: 772  FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY---CEHGGFVTYV 942
             + +L+ H +     +   +  ++VS + D TVK+WD  + +C+ +     +H   VT +
Sbjct: 495  CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCL 552

Query: 943  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH 1035
             F+ +   V  +  D TVK+WD++T   +++
Sbjct: 553  QFNKN--FVITSSDDGTVKLWDLKTGEFIRN 581


>ref|NP_001171245.1| F-box/WD repeat-containing protein 7 isoform 1 [Mus musculus].
          Length = 710

 Score =  126 bits (316), Expect = 4e-29
 Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 4/282 (1%)
 Frame = +1

Query: 409  KGHRD-AVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            KGH D  +TC+ F  N  ++ SGS D+ L VW            GH   V       +  
Sbjct: 380  KGHDDHVITCLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 435

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            ++ SGS D+T+++W             HT+TVR +H     +  V+ S D T++VW    
Sbjct: 436  IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIET 493

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + L  L  H+  VRC ++  DGR +VS + D  VK+WD  +  C+H+   H   V  + 
Sbjct: 494  GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 551

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F   G  V +  +D +++VWDV T   +     H +  + +      N LV+ ++DST+K
Sbjct: 552  F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 607

Query: 1126 ILDLMEGRLLYTLHG---HQGPATTRGFSRTGEYFASEGSDE 1242
            I D+  G+ L TL G   HQ   T   F++    F    SD+
Sbjct: 608  IWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN---FVITSSDD 646



 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GH   V C+    + K++ SGS D+ L VW ++     +   GH  AV CV +   G  +
Sbjct: 462  GHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRV 517

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
             SG+ D  V++W P  +      + HT  V S+ F  DG   V+ S D +I+VW      
Sbjct: 518  VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 575

Query: 772  FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY---CEHGGFVTYV 942
             + +L+ H +     +   +  ++VS + D TVK+WD  + +C+ +     +H   VT +
Sbjct: 576  CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCL 633

Query: 943  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH 1035
             F+ +   V  +  D TVK+WD++T   +++
Sbjct: 634  QFNKN--FVITSSDDGTVKLWDLKTGEFIRN 662


>ref|NP_001171244.1| F-box/WD repeat-containing protein 7 isoform 1 [Mus musculus].
          Length = 710

 Score =  126 bits (316), Expect = 4e-29
 Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 4/282 (1%)
 Frame = +1

Query: 409  KGHRD-AVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            KGH D  +TC+ F  N  ++ SGS D+ L VW            GH   V       +  
Sbjct: 380  KGHDDHVITCLQFCGN--RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-- 435

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            ++ SGS D+T+++W             HT+TVR +H     +  V+ S D T++VW    
Sbjct: 436  IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIET 493

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + L  L  H+  VRC ++  DGR +VS + D  VK+WD  +  C+H+   H   V  + 
Sbjct: 494  GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 551

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F   G  V +  +D +++VWDV T   +     H +  + +      N LV+ ++DST+K
Sbjct: 552  F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVK 607

Query: 1126 ILDLMEGRLLYTLHG---HQGPATTRGFSRTGEYFASEGSDE 1242
            I D+  G+ L TL G   HQ   T   F++    F    SD+
Sbjct: 608  IWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN---FVITSSDD 646



 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GH   V C+    + K++ SGS D+ L VW ++     +   GH  AV CV +   G  +
Sbjct: 462  GHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRV 517

Query: 592  ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
             SG+ D  V++W P  +      + HT  V S+ F  DG   V+ S D +I+VW      
Sbjct: 518  VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 575

Query: 772  FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY---CEHGGFVTYV 942
             + +L+ H +     +   +  ++VS + D TVK+WD  + +C+ +     +H   VT +
Sbjct: 576  CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCL 633

Query: 943  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQH 1035
             F+ +   V  +  D TVK+WD++T   +++
Sbjct: 634  QFNKN--FVITSSDDGTVKLWDLKTGEFIRN 662


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 45,244,769
Number of extensions: 1342716
Number of successful extensions: 8491
Number of sequences better than 1.0e-05: 190
Number of HSP's gapped: 6711
Number of HSP's successfully gapped: 550
Length of query: 418
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 314
Effective length of database: 12,493,815
Effective search space: 3923057910
Effective search space used: 3923057910
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008999
         (1255 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001155052.1| POC1 centriolar protein homolog A isoform 2 ...   590   e-168
Alignment   gi|NP_056241.3| POC1 centriolar protein homolog A isoform 1 [Ho...   590   e-168
Alignment   gi|NP_001155053.1| POC1 centriolar protein homolog A isoform 3 ...   527   e-150
Alignment   gi|NP_758440.1| POC1 centriolar protein homolog B isoform a [Ho...   406   e-113
Alignment   gi|NP_001186706.1| POC1 centriolar protein homolog B isoform b ...   364   e-100
Alignment   gi|NP_849143.1| WD repeat-containing protein 69 [Homo sapiens].      154   2e-37
Alignment   gi|NP_061942.2| WD repeat-containing protein 5B [Homo sapiens].      151   1e-36
Alignment   gi|NP_438172.1| WD repeat-containing protein 5 [Homo sapiens].       148   1e-35
Alignment   gi|NP_060058.1| WD repeat-containing protein 5 [Homo sapiens].       148   1e-35
Alignment   gi|NP_000421.1| platelet-activating factor acetylhydrolase IB s...   147   3e-35

>ref|NP_001155052.1| POC1 centriolar protein homolog A isoform 2 [Homo sapiens].
          Length = 359

 Score =  590 bits (1520), Expect = e-168
 Identities = 280/294 (95%), Positives = 286/294 (97%)
 Frame = +1

Query: 373  PYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 552
            P  EDPSLERHFKGHRDAVTCVDFS N KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA
Sbjct: 4    PCAEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 63

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 732
            VTCVNFSPSGHLLASGSRDKTVRIWVPN+KGESTVFRAHTATVRSVHFCSDGQSFVTASD
Sbjct: 64   VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123

Query: 733  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
            DKT+KVW+THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK+SRECVHSY
Sbjct: 124  DKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSY 183

Query: 913  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
            CEHGGFVTYVDFHPSGTC+AAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN LSFHPSGNY
Sbjct: 184  CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNY 243

Query: 1093 LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            L+TASSDSTLKILDLMEGRLLYTLHGHQGPATT  FSRTGEYFAS GSDEQVMV
Sbjct: 244  LITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|NP_056241.3| POC1 centriolar protein homolog A isoform 1 [Homo sapiens].
          Length = 407

 Score =  590 bits (1520), Expect = e-168
 Identities = 280/294 (95%), Positives = 286/294 (97%)
 Frame = +1

Query: 373  PYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 552
            P  EDPSLERHFKGHRDAVTCVDFS N KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA
Sbjct: 4    PCAEDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 63

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 732
            VTCVNFSPSGHLLASGSRDKTVRIWVPN+KGESTVFRAHTATVRSVHFCSDGQSFVTASD
Sbjct: 64   VTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASD 123

Query: 733  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
            DKT+KVW+THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK+SRECVHSY
Sbjct: 124  DKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSY 183

Query: 913  CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
            CEHGGFVTYVDFHPSGTC+AAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN LSFHPSGNY
Sbjct: 184  CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNY 243

Query: 1093 LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            L+TASSDSTLKILDLMEGRLLYTLHGHQGPATT  FSRTGEYFAS GSDEQVMV
Sbjct: 244  LITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|NP_001155053.1| POC1 centriolar protein homolog A isoform 3 [Homo sapiens].
          Length = 369

 Score =  527 bits (1357), Expect = e-150
 Identities = 249/259 (96%), Positives = 255/259 (98%)
 Frame = +1

Query: 478  MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTV 657
            MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN+KGESTV
Sbjct: 1    MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 60

Query: 658  FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR 837
            FRAHTATVRSVHFCSDGQSFVTASDDKT+KVW+THRQKFLFSLSQHINWVRCAKFSPDGR
Sbjct: 61   FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR 120

Query: 838  LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRT 1017
            LIVSASDDKTVKLWDK+SRECVHSYCEHGGFVTYVDFHPSGTC+AAAGMDNTVKVWDVRT
Sbjct: 121  LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 180

Query: 1018 HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRG 1197
            HRLLQHYQLHSAAVN LSFHPSGNYL+TASSDSTLKILDLMEGRLLYTLHGHQGPATT  
Sbjct: 181  HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 240

Query: 1198 FSRTGEYFASEGSDEQVMV 1254
            FSRTGEYFAS GSDEQVMV
Sbjct: 241  FSRTGEYFASGGSDEQVMV 259



 Score =  152 bits (384), Expect = 6e-37
 Identities = 81/241 (33%), Positives = 119/241 (49%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            F GH+DAVTCV+FS +   LASGS D  + +W    +  +  F  H   V  V+F   G 
Sbjct: 19   FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 78

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
               + S DKTV++W  + +        H   VR   F  DG+  V+ASDDKT+K+W    
Sbjct: 79   SFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSS 138

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
            ++ + S  +H  +V    F P G  I +A  D TVK+WD  +   +  Y  H   V  + 
Sbjct: 139  RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLS 198

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            FHPSG  +  A  D+T+K+ D+   RLL     H      ++F  +G Y  +  SD  + 
Sbjct: 199  FHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 258

Query: 1126 I 1128
            +
Sbjct: 259  V 259


>ref|NP_758440.1| POC1 centriolar protein homolog B isoform a [Homo sapiens].
          Length = 478

 Score =  406 bits (1043), Expect = e-113
 Identities = 186/291 (63%), Positives = 238/291 (81%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            EDP LER+FKGH+ A+T +D S N KQLA+ S D+ LM+W+ KP +RAYR+ GHKD VT 
Sbjct: 6    EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V FSP G+LLAS SRD+TVR+W+P+ +G+ + F+AHTA VRSV F +DGQ   TAS+DK+
Sbjct: 66   VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            IKVWS +RQ+FL+SL +H +WVRCAKFSPDGRLIVS S+DKT+K+WD T+++CV+++ + 
Sbjct: 126  IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185

Query: 922  GGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 1101
             GF  +VDF+PSGTC+A+AG D TVKVWDVR ++LLQHYQ+HS  VN +SFHPSGNYL+T
Sbjct: 186  VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLIT 245

Query: 1102 ASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            ASSD TLKILDL+EGRL+YTL GH GP  T  FS+ GE FAS G+D QV++
Sbjct: 246  ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLL 296



 Score =  118 bits (295), Expect = 1e-26
 Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 13/257 (5%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            FK H   V  VDFS + + LA+ S D  + VW M  Q   Y    H   V C  FSP G 
Sbjct: 98   FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR 157

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            L+ S S DKT++IW    K     F         V F   G    +A  D+T+KVW    
Sbjct: 158  LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV 217

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             K L     H   V C  F P G  +++AS D T+K+ D      +++   H G V  V 
Sbjct: 218  NKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277

Query: 946  FHPSGTCVAAAGMDNTVKVWDVR---------THRLLQHYQL----HSAAVNALSFHPSG 1086
            F   G   A+ G D  V +W            T R L+        H   +   + HP  
Sbjct: 278  FSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHE 337

Query: 1087 NYLVTASSDSTLKILDL 1137
              + T   +  L+++DL
Sbjct: 338  EKVETVEINPKLEVIDL 354


>ref|NP_001186706.1| POC1 centriolar protein homolog B isoform b [Homo sapiens].
          Length = 436

 Score =  364 bits (934), Expect = e-100
 Identities = 164/254 (64%), Positives = 210/254 (82%)
 Frame = +1

Query: 493  MVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHT 672
            M+W+ KP +RAYR+ GHKD VT V FSP G+LLAS SRD+TVR+W+P+ +G+ + F+AHT
Sbjct: 1    MLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60

Query: 673  ATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSA 852
            A VRSV F +DGQ   TAS+DK+IKVWS +RQ+FL+SL +H +WVRCAKFSPDGRLIVS 
Sbjct: 61   APVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSC 120

Query: 853  SDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQ 1032
            S+DKT+K+WD T+++CV+++ +  GF  +VDF+PSGTC+A+AG D TVKVWDVR ++LLQ
Sbjct: 121  SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 180

Query: 1033 HYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTG 1212
            HYQ+HS  VN +SFHPSGNYL+TASSD TLKILDL+EGRL+YTL GH GP  T  FS+ G
Sbjct: 181  HYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG 240

Query: 1213 EYFASEGSDEQVMV 1254
            E FAS G+D QV++
Sbjct: 241  ELFASGGADTQVLL 254



 Score =  148 bits (374), Expect = 9e-36
 Identities = 79/237 (33%), Positives = 119/237 (50%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            + GH+D VT V FS +   LAS S D  + +W    + +   F  H   V  V+FS  G 
Sbjct: 14   YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 73

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
             LA+ S DK++++W    +        HT  VR   F  DG+  V+ S+DKTIK+W T  
Sbjct: 74   FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 133

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
            ++ + + S  + +     F+P G  I SA  D+TVK+WD    + +  Y  H G V  + 
Sbjct: 134  KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 193

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 1116
            FHPSG  +  A  D T+K+ D+   RL+   Q H+  V  +SF   G    +  +D+
Sbjct: 194  FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADT 250



 Score =  118 bits (295), Expect = 1e-26
 Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 13/257 (5%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            FK H   V  VDFS + + LA+ S D  + VW M  Q   Y    H   V C  FSP G 
Sbjct: 56   FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR 115

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            L+ S S DKT++IW    K     F         V F   G    +A  D+T+KVW    
Sbjct: 116  LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRV 175

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             K L     H   V C  F P G  +++AS D T+K+ D      +++   H G V  V 
Sbjct: 176  NKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 235

Query: 946  FHPSGTCVAAAGMDNTVKVWDVR---------THRLLQHYQL----HSAAVNALSFHPSG 1086
            F   G   A+ G D  V +W            T R L+        H   +   + HP  
Sbjct: 236  FSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPPHLLDIYPRTPHPHE 295

Query: 1087 NYLVTASSDSTLKILDL 1137
              + T   +  L+++DL
Sbjct: 296  EKVETVEINPKLEVIDL 312


>ref|NP_849143.1| WD repeat-containing protein 69 [Homo sapiens].
          Length = 415

 Score =  154 bits (388), Expect = 2e-37
 Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 1/278 (0%)
 Frame = +1

Query: 409  KGHRDAVTCVDFSFNM-KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            +GHR+ V  + F+     ++A+GS D    +W ++     + F GH   + C++F+P   
Sbjct: 131  EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST 190

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            L+A+GS D T ++W      E    R H+A + S+ F + G   +T S D T+ VW    
Sbjct: 191  LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT 250

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + +  L  H   +  A F+ D  LI++ S DKT KLWD T+ +CV +   H   +    
Sbjct: 251  GRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSC 310

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F  +G  +A A  D T +++   T + +   + H   ++ +SF+P GN+L+T SSD T +
Sbjct: 311  FDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTAR 370

Query: 1126 ILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSD 1239
            I D   G+ L  L GH     +  F+  G    +   D
Sbjct: 371  IWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408



 Score =  138 bits (347), Expect = 1e-32
 Identities = 69/241 (28%), Positives = 125/241 (51%)
 Frame = +1

Query: 406  FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 585
            F+GH   + C+ F+     +A+GSMD+   +W ++     Y   GH   +  ++F+ SG 
Sbjct: 173  FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGD 232

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
             + +GS D TV +W  +   +  +   H A + S  F  D    +T S DKT K+W    
Sbjct: 233  RIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN 292

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             K + +L+ H + +  + F   G+LI +AS D T +++   +R+C+     H G ++ + 
Sbjct: 293  GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS 352

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F+P G  +     D T ++WD +T + LQ  + H+  + + +F+  GN ++T S D+T +
Sbjct: 353  FNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCR 412

Query: 1126 I 1128
            I
Sbjct: 413  I 413



 Score =  111 bits (278), Expect = 1e-24
 Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
 Frame = +1

Query: 655  VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF-SPD 831
            V +AH   + +V     G  F+T S D+T K+W T   + L +L  H N V    F +P 
Sbjct: 87   VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPY 146

Query: 832  GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV 1011
            G  I + S DKT KLW   + +C H++  H   +  + F+P  T VA   MD T K+WD+
Sbjct: 147  GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206

Query: 1012 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATT 1191
            +    +   + HSA + +LSF+ SG+ ++T S D T+ + D   GR +  L GH    ++
Sbjct: 207  QNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISS 266

Query: 1192 RGFS 1203
              F+
Sbjct: 267  ASFN 270



 Score =  109 bits (273), Expect = 5e-24
 Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 1/283 (0%)
 Frame = +1

Query: 409  KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS-PSGH 585
            K H   +T V  + +     +GS D    +W            GH++ V  + F+ P G 
Sbjct: 89   KAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGD 148

Query: 586  LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
             +A+GS DKT ++W          FR HTA +  + F        T S D T K+W    
Sbjct: 149  KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN 208

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
             + +++L  H   +    F+  G  I++ S D TV +WD  +   V+    H   ++   
Sbjct: 209  GEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSAS 268

Query: 946  FHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
            F+   + +    MD T K+WD    + +     H   +    F  +G  + TAS+D T +
Sbjct: 269  FNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328

Query: 1126 ILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            I      + +  L GH+G  +   F+  G +  +  SD+   +
Sbjct: 329  IFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARI 371



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
 Frame = +1

Query: 772  FLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDF 948
            +LF  L  HI  +     +  G   ++ S D+T KLWD  S E +++   H   V  + F
Sbjct: 83   YLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAF 142

Query: 949  -HPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLK 1125
             +P G  +A    D T K+W V T +    ++ H+A +  LSF+P    + T S D+T K
Sbjct: 143  NNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202

Query: 1126 ILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            + D+  G  +YTL GH     +  F+ +G+   +   D  V+V
Sbjct: 203  LWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVV 245



 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 39/156 (25%), Positives = 68/156 (43%)
 Frame = +1

Query: 412 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
           GH   ++   F+++   + +GSMD    +W           TGH D +    F  +G L+
Sbjct: 259 GHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLI 318

Query: 592 ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 771
           A+ S D T RI+    +        H   +  + F   G   +T S DKT ++W     +
Sbjct: 319 ATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQ 378

Query: 772 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
            L  L  H + +    F+  G ++++ S D T ++W
Sbjct: 379 CLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414


>ref|NP_061942.2| WD repeat-containing protein 5B [Homo sapiens].
          Length = 330

 Score =  151 bits (381), Expect = 1e-36
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 4/242 (1%)
 Frame = +1

Query: 538  GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQS 714
            GH +AV+ V FSP+G  LAS S D+ + IW   + K E T++  H   +  V + SD   
Sbjct: 39   GHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLY-GHNLEISDVAWSSDSSR 97

Query: 715  FVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 894
             V+ASDDKT+K+W     K L +L  H N+V C  F+P   LI+S S D+TVK+W+  + 
Sbjct: 98   LVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTG 157

Query: 895  ECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY-QLHSAAVNALS 1071
            +C+ +   H   V+ V F+ SG+ + +   D   ++WD  + + L+      +  V+ + 
Sbjct: 158  KCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVK 217

Query: 1072 FHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFASEGSDEQ 1245
            F P+G Y++TA+ D+TLK+ D   GR L T  GH+         FS TG  +   GS++ 
Sbjct: 218  FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 277

Query: 1246 VM 1251
            ++
Sbjct: 278  LV 279



 Score =  128 bits (321), Expect = 1e-29
 Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+   GH   ++ V +S +  +L S S D  L +W ++         GH + V C 
Sbjct: 72   DGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCC 131

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            NF+P  +L+ SGS D+TV+IW            AH+  V +VHF   G   V+ S D   
Sbjct: 132  NFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLC 191

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W     + L +L    N  V   KFSP+G+ I++A+ D T+KLWD +   C+ +Y  H
Sbjct: 192  RIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGH 251

Query: 922  GG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  + +F    G  + +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 252  KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENL 311

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 312  IASAALENDKTIKL 325



 Score =  124 bits (310), Expect = 2e-28
 Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 6/271 (2%)
 Frame = +1

Query: 379  PEDPS--LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDA 552
            PE+P+  L+    GH +AV+ V FS N + LAS S D  +++W            GH   
Sbjct: 26   PENPNYALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLE 85

Query: 553  VTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASD 732
            ++ V +S     L S S DKT+++W           + H+  V   +F       ++ S 
Sbjct: 86   ISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF 145

Query: 733  DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 912
            D+T+K+W     K L +LS H + V    F+  G LIVS S D   ++WD  S +C+ + 
Sbjct: 146  DETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTL 205

Query: 913  CEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS-- 1083
             +     V++V F P+G  +  A +DNT+K+WD    R L+ Y  H      +  + S  
Sbjct: 206  VDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVT 265

Query: 1084 -GNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
             G ++V+ S D+ + I +L    ++  L GH
Sbjct: 266  GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 296



 Score = 79.3 bits (194), Expect = 7e-15
 Identities = 44/153 (28%), Positives = 77/153 (50%)
 Frame = +1

Query: 781  SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 960
            +L  H   V   KFSP+G  + S+S D+ + +W     +   +   H   ++ V +    
Sbjct: 36   TLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDS 95

Query: 961  TCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLM 1140
            + + +A  D T+K+WDVR+ + L+  + HS  V   +F+P  N +++ S D T+KI ++ 
Sbjct: 96   SRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVK 155

Query: 1141 EGRLLYTLHGHQGPATTRGFSRTGEYFASEGSD 1239
             G+ L TL  H  P +   F+ +G    S   D
Sbjct: 156  TGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYD 188



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 33/140 (23%), Positives = 66/140 (47%)
 Frame = +1

Query: 835  RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            +L +S+S +++ ++ +  +     +   H   V+ V F P+G  +A++  D  + +W   
Sbjct: 12   QLALSSSANQSKEVPENPNYALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAY 71

Query: 1015 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTR 1194
              +  +    H+  ++ +++    + LV+AS D TLK+ D+  G+ L TL GH       
Sbjct: 72   DGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCC 131

Query: 1195 GFSRTGEYFASEGSDEQVMV 1254
             F+       S   DE V +
Sbjct: 132  NFNPPSNLIISGSFDETVKI 151



 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
 Frame = +1

Query: 406 FKGHRDAVTCVDFSFNM---KQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 576
           + GH++   C+  +F++   K + SGS D+ + +W+++ +    +  GH D V      P
Sbjct: 248 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHP 307

Query: 577 SGHLLASGS--RDKTVRIWVPN 636
           + +L+AS +   DKT+++W+ N
Sbjct: 308 TENLIASAALENDKTIKLWMSN 329


>ref|NP_438172.1| WD repeat-containing protein 5 [Homo sapiens].
          Length = 334

 Score =  148 bits (373), Expect = 1e-35
 Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 6/249 (2%)
 Frame = +1

Query: 523  AYRFT--GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVH 693
            A +FT  GH  AV+ V FSP+G  LAS S DK ++IW   + K E T+   H   +  V 
Sbjct: 36   ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVA 94

Query: 694  FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 873
            + SD    V+ASDDKT+K+W     K L +L  H N+V C  F+P   LIVS S D++V+
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154

Query: 874  LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY-QLHS 1050
            +WD  + +C+ +   H   V+ V F+  G+ + ++  D   ++WD  + + L+      +
Sbjct: 155  IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214

Query: 1051 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFA 1224
              V+ + F P+G Y++ A+ D+TLK+ D  +G+ L T  GH+         FS TG  + 
Sbjct: 215  PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274

Query: 1225 SEGSDEQVM 1251
              GS++ ++
Sbjct: 275  VSGSEDNLV 283



 Score =  134 bits (337), Expect = 2e-31
 Identities = 79/254 (31%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+   GH+  ++ V +S +   L S S D  L +W +          GH + V C 
Sbjct: 76   DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            NF+P  +L+ SGS D++VRIW            AH+  V +VHF  DG   V++S D   
Sbjct: 136  NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W T   + L +L    N  V   KFSP+G+ I++A+ D T+KLWD +  +C+ +Y  H
Sbjct: 196  RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255

Query: 922  GG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  + +F    G  + +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 256  KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 316  IASAALENDKTIKL 329



 Score =  128 bits (322), Expect = 1e-29
 Identities = 83/273 (30%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
 Frame = +1

Query: 373  PYPEDPSLERHFK--GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHK 546
            P P  P+    F   GH  AV+ V FS N + LAS S D  + +W           +GHK
Sbjct: 28   PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 87

Query: 547  DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 726
              ++ V +S   +LL S S DKT++IW  +        + H+  V   +F       V+ 
Sbjct: 88   LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 727  SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 906
            S D+++++W     K L +L  H + V    F+ DG LIVS+S D   ++WD  S +C+ 
Sbjct: 148  SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207

Query: 907  SYCEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS 1083
            +  +     V++V F P+G  + AA +DNT+K+WD    + L+ Y  H      +  + S
Sbjct: 208  TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 267

Query: 1084 ---GNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
               G ++V+ S D+ + I +L    ++  L GH
Sbjct: 268  VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 33/112 (29%), Positives = 52/112 (46%)
 Frame = +1

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            H   V+ V F P+G  +A++  D  +K+W     +  +    H   ++ +++    N LV
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            +AS D TLKI D+  G+ L TL GH        F+       S   DE V +
Sbjct: 104  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155


>ref|NP_060058.1| WD repeat-containing protein 5 [Homo sapiens].
          Length = 334

 Score =  148 bits (373), Expect = 1e-35
 Identities = 86/249 (34%), Positives = 137/249 (55%), Gaps = 6/249 (2%)
 Frame = +1

Query: 523  AYRFT--GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVH 693
            A +FT  GH  AV+ V FSP+G  LAS S DK ++IW   + K E T+   H   +  V 
Sbjct: 36   ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVA 94

Query: 694  FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 873
            + SD    V+ASDDKT+K+W     K L +L  H N+V C  F+P   LIVS S D++V+
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154

Query: 874  LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY-QLHS 1050
            +WD  + +C+ +   H   V+ V F+  G+ + ++  D   ++WD  + + L+      +
Sbjct: 155  IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214

Query: 1051 AAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTRGFSRTGEYFA 1224
              V+ + F P+G Y++ A+ D+TLK+ D  +G+ L T  GH+         FS TG  + 
Sbjct: 215  PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 274

Query: 1225 SEGSDEQVM 1251
              GS++ ++
Sbjct: 275  VSGSEDNLV 283



 Score =  134 bits (337), Expect = 2e-31
 Identities = 79/254 (31%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
 Frame = +1

Query: 385  DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 564
            D   E+   GH+  ++ V +S +   L S S D  L +W +          GH + V C 
Sbjct: 76   DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135

Query: 565  NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 744
            NF+P  +L+ SGS D++VRIW            AH+  V +VHF  DG   V++S D   
Sbjct: 136  NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195

Query: 745  KVWSTHRQKFLFSLSQHIN-WVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 921
            ++W T   + L +L    N  V   KFSP+G+ I++A+ D T+KLWD +  +C+ +Y  H
Sbjct: 196  RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255

Query: 922  GG--FVTYVDFH-PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY 1092
                +  + +F    G  + +   DN V +W+++T  ++Q  Q H+  V + + HP+ N 
Sbjct: 256  KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315

Query: 1093 LVTAS--SDSTLKI 1128
            + +A+  +D T+K+
Sbjct: 316  IASAALENDKTIKL 329



 Score =  128 bits (322), Expect = 1e-29
 Identities = 83/273 (30%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
 Frame = +1

Query: 373  PYPEDPSLERHFK--GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHK 546
            P P  P+    F   GH  AV+ V FS N + LAS S D  + +W           +GHK
Sbjct: 28   PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 87

Query: 547  DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 726
              ++ V +S   +LL S S DKT++IW  +        + H+  V   +F       V+ 
Sbjct: 88   LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 727  SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 906
            S D+++++W     K L +L  H + V    F+ DG LIVS+S D   ++WD  S +C+ 
Sbjct: 148  SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207

Query: 907  SYCEHGG-FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS 1083
            +  +     V++V F P+G  + AA +DNT+K+WD    + L+ Y  H      +  + S
Sbjct: 208  TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 267

Query: 1084 ---GNYLVTASSDSTLKILDLMEGRLLYTLHGH 1173
               G ++V+ S D+ + I +L    ++  L GH
Sbjct: 268  VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 33/112 (29%), Positives = 52/112 (46%)
 Frame = +1

Query: 919  HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 1098
            H   V+ V F P+G  +A++  D  +K+W     +  +    H   ++ +++    N LV
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 1099 TASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            +AS D TLKI D+  G+ L TL GH        F+       S   DE V +
Sbjct: 104  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155


>ref|NP_000421.1| platelet-activating factor acetylhydrolase IB subunit alpha [Homo
            sapiens].
          Length = 410

 Score =  147 bits (370), Expect = 3e-35
 Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 22/303 (7%)
 Frame = +1

Query: 412  GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 591
            GHR  VT V F      + S S D+ + VW  +         GH D+V  ++F  SG LL
Sbjct: 106  GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165

Query: 592  ASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHR 765
            AS S D T+++W  + +G   +     H   V SV    +G   V+AS DKTIK+W    
Sbjct: 166  ASCSADMTIKLW--DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223

Query: 766  QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 945
               + + + H  WVR  + + DG LI S S+D+TV++W   ++EC     EH   V  + 
Sbjct: 224  GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283

Query: 946  FHPS--------------------GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 1065
            + P                     G  + +   D T+K+WDV T   L     H   V  
Sbjct: 284  WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343

Query: 1066 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTRGFSRTGEYFASEGSDEQ 1245
            + FH  G ++++ + D TL++ D    R + TL+ H+   T+  F +T  Y  +   D+ 
Sbjct: 344  VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403

Query: 1246 VMV 1254
            V V
Sbjct: 404  VKV 406



 Score =  139 bits (350), Expect = 6e-33
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
 Frame = +1

Query: 382  EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 561
            E    ER  KGH D+V  + F  + K LAS S D  + +W  +         GH   V+ 
Sbjct: 138  ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197

Query: 562  VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 741
            V   P+G  + S SRDKT+++W          F  H   VR V    DG    + S+D+T
Sbjct: 198  VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257

Query: 742  IKVWSTHRQKFLFSLSQHINWVRCAKFSPD--------------------GRLIVSASDD 861
            ++VW    ++    L +H + V C  ++P+                    G  ++S S D
Sbjct: 258  VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317

Query: 862  KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQ 1041
            KT+K+WD ++  C+ +   H  +V  V FH  G  + +   D T++VWD +  R ++   
Sbjct: 318  KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377

Query: 1042 LHSAAVNALSFHPSGNYLVTASSDSTLKI 1128
             H   V +L FH +  Y+VT S D T+K+
Sbjct: 378  AHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406



 Score =  125 bits (313), Expect = 1e-28
 Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
 Frame = +1

Query: 400  RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 579
            R   GH   V+ V    N   + S S D  + +W ++       FTGH++ V  V  +  
Sbjct: 186  RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245

Query: 580  GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD------------------ 705
            G L+AS S D+TVR+WV   K      R H   V  + +  +                  
Sbjct: 246  GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305

Query: 706  --GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 879
              G   ++ S DKTIK+W       L +L  H NWVR   F   G+ I+S +DDKT+++W
Sbjct: 306  KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 880  DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 1014
            D  ++ C+ +   H  FVT +DFH +   V    +D TVKVW+ R
Sbjct: 366  DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score =  122 bits (307), Expect = 5e-28
 Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
 Frame = +1

Query: 499  WHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTAT 678
            W  +P  + Y  +GH+  VT V F P   ++ S S D T+++W           + HT +
Sbjct: 94   WIPRPPEK-YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152

Query: 679  VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 858
            V+ + F   G+   + S D TIK+W     + + ++  H + V      P+G  IVSAS 
Sbjct: 153  VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212

Query: 859  DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHY 1038
            DKT+K+W+  +  CV ++  H  +V  V  +  GT +A+   D TV+VW V T       
Sbjct: 213  DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272

Query: 1039 QLHSAAVNALSFHPSGNY--------------------LVTASSDSTLKILDLMEGRLLY 1158
            + H   V  +S+ P  +Y                    L++ S D T+K+ D+  G  L 
Sbjct: 273  REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332

Query: 1159 TLHGHQGPATTRGFSRTGEYFASEGSDEQVMV 1254
            TL GH        F   G++  S   D+ + V
Sbjct: 333  TLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 53,656,102
Number of extensions: 1617586
Number of successful extensions: 10811
Number of sequences better than 1.0e-05: 231
Number of HSP's gapped: 8494
Number of HSP's successfully gapped: 702
Length of query: 418
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 313
Effective length of database: 14,835,944
Effective search space: 4643650472
Effective search space used: 4643650472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-008999
         (1255 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr13                                                         733   0.0  

>Sscrofa_Chr13 
||          Length = 218635234

 Score =  733 bits (370), Expect = 0.0
 Identities = 373/374 (99%)
 Strand = Plus / Minus

                                                                            
Query: 9        gaaggctgtgttcgccttagccttaaccggactacccgtcggcggggcgaacacttcatc 68
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37521629 gaaggctgtgttcgccttagccttaaccggactacccgtcggcggggcgaacacttcatc 37521570

                                                                            
Query: 69       ctgggctttttaatttctcagggggaatgagcgacggtggacacaggcctttagcgacgc 128
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37521569 ctgggctttttaatttctcagggggaatgagcgacggtggacacaggcctttagcgacgc 37521510

                                                                            
Query: 129      cgtccgtaggctgcctggcttggtggtgctggacgcggagacagtggactcggtcaactc 188
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37521509 cgtccgtaggctgcctggcttggtggtgctggacgcggagacagtggactcggtcaactc 37521450

                                                                            
Query: 189      tccttccggtcccgggtgcaaaaagccgaggcgcccagtctcctttaattgcggtgggcg 248
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37521449 tccttccggtcccgggtgcaaaaagccgaggcgcccagtctcctttaattgcggtgggcg 37521390

                                                                            
Query: 249      gggcggggcgaagcgacccgcgttgctattggcggcggttgggggcgcggaaactgaacg 308
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37521389 gggcggggccaagcgacccgcgttgctattggcggcggttgggggcgcggaaactgaacg 37521330

                                                                            
Query: 309      cgcctcaacggcagccgctgcttcctccggcgccttgggcgctcccagccccgccatggc 368
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37521329 cgcctcaacggcagccgctgcttcctccggcgccttgggcgctcccagccccgccatggc 37521270

                              
Query: 369      atcgccctacccgg 382
                ||||||||||||||
Sbjct: 37521269 atcgccctacccgg 37521256



 Score =  361 bits (182), Expect = 6e-97
 Identities = 182/182 (100%)
 Strand = Plus / Minus

                                                                            
Query: 639      caaaggcgagtcaactgtgtttcgtgcacacacggccacggtgaggagcgtccatttctg 698
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37516748 caaaggcgagtcaactgtgtttcgtgcacacacggccacggtgaggagcgtccatttctg 37516689

                                                                            
Query: 699      cagcgatggccagtcctttgtgacggcctctgacgacaagacaatcaaggtgtggtcaac 758
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37516688 cagcgatggccagtcctttgtgacggcctctgacgacaagacaatcaaggtgtggtcaac 37516629

                                                                            
Query: 759      ccatcgccaaaaattcctattctccctgagccagcacatcaactgggtccgctgtgccaa 818
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37516628 ccatcgccaaaaattcctattctccctgagccagcacatcaactgggtccgctgtgccaa 37516569

                  
Query: 819      gt 820
                ||
Sbjct: 37516568 gt 37516567



 Score =  343 bits (173), Expect = 1e-91
 Identities = 173/173 (100%)
 Strand = Plus / Minus

                                                                            
Query: 466      gccagcggctccatggactcctgcctcatggtgtggcacatgaagccccagtcacgtgcc 525
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37517282 gccagcggctccatggactcctgcctcatggtgtggcacatgaagccccagtcacgtgcc 37517223

                                                                            
Query: 526      taccgcttcaccggccacaaggatgcggtcacctgtgtgaacttctccccttcgggacac 585
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37517222 taccgcttcaccggccacaaggatgcggtcacctgtgtgaacttctccccttcgggacac 37517163

                                                                     
Query: 586      ctgcttgcctcgggctctcgcgacaagaccgttcgcatctgggtacccaatat 638
                |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37517162 ctgcttgcctcgggctctcgcgacaagaccgttcgcatctgggtacccaatat 37517110



 Score =  264 bits (133), Expect = 1e-67
 Identities = 133/133 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1043     tgcacagcgcagcggtgaacgccctctccttccacccgtcgggaaactacctggtcacag 1102
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37499329 tgcacagcgcagcggtgaacgccctctccttccacccgtcgggaaactacctggtcacag 37499270

                                                                            
Query: 1103     cctccagcgactccaccctgaagatcctggacctcatggagggccggctgctctacacgc 1162
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37499269 cctccagcgactccaccctgaagatcctggacctcatggagggccggctgctctacacgc 37499210

                             
Query: 1163     tccacgggcatca 1175
                |||||||||||||
Sbjct: 37499209 tccacgggcatca 37499197



 Score =  232 bits (117), Expect = 4e-58
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                            
Query: 926      gctttgtcacctacgtggacttccaccccagcggcacatgtgtcgctgctgccggcatgg 985
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37508245 gctttgtcacctacgtggacttccaccccagcggcacatgtgtcgctgctgccggcatgg 37508186

                                                                         
Query: 986      acaacacggtgaaggtgtgggacgtgcggactcaccggctcttgcagcattatcaat 1042
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37508185 acaacacggtgaaggtgtgggacgtgcggactcaccggctcttgcagcattatcaat 37508129



 Score =  214 bits (108), Expect = 9e-53
 Identities = 108/108 (100%)
 Strand = Plus / Minus

                                                                            
Query: 819      gttctccccggatggccggctcattgtgtctgccagtgacgacaagactgtcaagctgtg 878
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37509549 gttctccccggatggccggctcattgtgtctgccagtgacgacaagactgtcaagctgtg 37509490

                                                                
Query: 879      ggacaagaccagccgggagtgtgtccactcgtactgtgagcatggcgg 926
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37509489 ggacaagaccagccgggagtgtgtccactcgtactgtgagcatggcgg 37509442



 Score =  170 bits (86), Expect = 1e-39
 Identities = 86/86 (100%)
 Strand = Plus / Minus

                                                                            
Query: 381      ggaggacccctcgctggagaggcattttaagggtcaccgagatgcagttacctgtgtgga 440
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37518319 ggaggacccctcgctggagaggcattttaagggtcaccgagatgcagttacctgtgtgga 37518260

                                          
Query: 441      cttcagtttcaacatgaagcagctgg 466
                ||||||||||||||||||||||||||
Sbjct: 37518259 cttcagtttcaacatgaagcagctgg 37518234



 Score =  109 bits (55), Expect = 4e-21
 Identities = 67/71 (94%)
 Strand = Plus / Minus

                                                                            
Query: 1177     ggtccagccaccacccgtggcttttcaagaacgggggaatattttgcttctgaaggttct 1236
                |||||||||||||||  || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 37488915 ggtccagccaccaccgttgccttttcaagaacgggggaatattttgcttctggaggttct 37488856

                           
Query: 1237     gatgaacaagt 1247
                |||||||||||
Sbjct: 37488855 gatgaacaagt 37488845


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,662,868
Number of extensions: 118
Number of successful extensions: 118
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 118
Number of HSP's successfully gapped: 8
Length of query: 1255
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1234
Effective length of database: 2,808,413,156
Effective search space: 3465581834504
Effective search space used: 3465581834504
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)