Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009111
(1419 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001068660.1| ankyrin repeat and SAM domain-containing pro... 575 e-164
Alignment gi|NP_001179631.1| Usher syndrome 1G (autosomal recessive) [Bos... 219 6e-57
Alignment gi|XP_002696232.1| PREDICTED: Usher syndrome 1G homolog [Bos ta... 219 6e-57
Alignment gi|NP_001192889.1| serine/threonine-protein phosphatase 6 regul... 74 2e-13
Alignment gi|XP_002685223.1| PREDICTED: UNCoordinated family member (unc-... 74 2e-13
Alignment gi|XP_002685395.1| PREDICTED: rolling pebbles-like [Bos taurus]. 68 2e-11
Alignment gi|XP_584693.3| PREDICTED: tetratricopeptide repeat, ankyrin re... 68 2e-11
Alignment gi|NP_001192878.1| ankyrin repeat domain-containing protein 50 ... 67 3e-11
Alignment gi|XP_002694440.1| PREDICTED: rolling pebbles-like [Bos taurus]. 67 3e-11
Alignment gi|NP_001070395.1| ankyrin repeat and SOCS box protein 3 [Bos t... 63 6e-10
>ref|NP_001068660.1| ankyrin repeat and SAM domain-containing protein 4B [Bos taurus].
Length = 412
Score = 575 bits (1481), Expect = e-164
Identities = 307/417 (73%), Positives = 320/417 (76%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
MSTRYHQAASDSYLELLKEAT+RDLNLSDEDGMTPTLLAAYHGNL ALEIICSRGGDP+R
Sbjct: 1 MSTRYHQAASDSYLELLKEATKRDLNLSDEDGMTPTLLAAYHGNLEALEIICSRGGDPNR 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA
Sbjct: 61 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTYXXXXXXXXXXXXXXX 591
ATAQNIMNPKKVTR KEQAQKN +KQIKECERLQEKHQNKMARTY
Sbjct: 121 ATAQNIMNPKKVTRQKEQAQKNVKKQIKECERLQEKHQNKMARTYSKEESGTLSSSKGTF 180
Query: 592 XXXXXXXXXXXXXXXXLSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRNVMEMFKXXXXX 771
LSK IKDT KLK+KKNKDTAEQ+G ESRSGQ+NVME+F+
Sbjct: 181 SRSVLSNASASNTFGSLSKGIKDTLKLKFKKNKDTAEQLGNESRSGQKNVMEVFR----E 236
Query: 772 XXXXKFSGDFKEKLQFSLKGDSYVQHESILNRPGLGNVVFQSNRILSPEDISGSKREFGF 951
+ SGDF EKLQFS KGDS +QHESILNRPGLGNVVF NRI SPEDIS S+RE GF
Sbjct: 237 DEEDELSGDFIEKLQFSEKGDSCMQHESILNRPGLGNVVFGRNRIFSPEDISDSRRELGF 296
Query: 952 KMPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLEEF 1131
MPS ATPLEVFLQSH+LEEF
Sbjct: 297 TMPS-ELLQRQGEAEADEEGEENHHEDDLPWDEDEVEWEEDVVDATPLEVFLQSHYLEEF 355
Query: 1132 LPIFMREQIDLEALLLCSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
LPIFMREQIDLEALLLCSDEDLQSI MQLGPRKKVLNAINRRKQVLQQPGQLVDT+L
Sbjct: 356 LPIFMREQIDLEALLLCSDEDLQSIQMQLGPRKKVLNAINRRKQVLQQPGQLVDTNL 412
>ref|NP_001179631.1| Usher syndrome 1G (autosomal recessive) [Bos taurus].
Length = 462
Score = 219 bits (557), Expect = 6e-57
Identities = 100/165 (60%), Positives = 128/165 (77%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
M+ +YH+AA D YLELLKEATR++LN DEDGMTPTL AAYHGNL +L +I SRGGDPD+
Sbjct: 1 MNDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDK 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLH AA+NGH HC+SFL++FGANI+ LDND +PLD AA + ECV LD
Sbjct: 61 CDIWGNTPLHLAAANGHLHCLSFLVSFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSI 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTY 546
A Q+ ++PK V +LK++A + A ++I+EC +LQ KH +M R +
Sbjct: 121 AAKQSSLSPKLVGKLKDKAFREAERRIRECAKLQRKHHERMERRF 165
Score = 89.4 bits (220), Expect = 7e-18
Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Frame = +1
Query: 847 HESILNRPGLGNVVFQSNRI------LSPED--ISGSKREFGFKMPSXXXXXXXXXXXXX 1002
H+S+ RPGLG +VF+ N + L ED + G+ G ++ S
Sbjct: 304 HDSLFTRPGLGTMVFRRNYLSSGLHGLGREDAALDGAGPPRG-RLQSSTSLDDDSLGSAN 362
Query: 1003 XXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLEEFLPIFMREQIDLEALLLC 1182
+PLE FL S H+E+F + +E+IDLEAL+LC
Sbjct: 363 SLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFTSLLRQEKIDLEALMLC 422
Query: 1183 SDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
SD DL+SI + LGPRKK+L A+ RR+Q L++P L DT L
Sbjct: 423 SDLDLRSISVPLGPRKKILGAVRRRRQALERPPALEDTEL 462
>ref|XP_002696232.1| PREDICTED: Usher syndrome 1G homolog [Bos taurus].
Length = 462
Score = 219 bits (557), Expect = 6e-57
Identities = 100/165 (60%), Positives = 128/165 (77%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
M+ +YH+AA D YLELLKEATR++LN DEDGMTPTL AAYHGNL +L +I SRGGDPD+
Sbjct: 1 MNDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDK 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLH AA+NGH HC+SFL++FGANI+ LDND +PLD AA + ECV LD
Sbjct: 61 CDIWGNTPLHLAAANGHLHCLSFLVSFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSI 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTY 546
A Q+ ++PK V +LK++A + A ++I+EC +LQ KH +M R +
Sbjct: 121 AAKQSSLSPKLVGKLKDKAFREAERRIRECAKLQRKHHERMERRF 165
Score = 89.4 bits (220), Expect = 7e-18
Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Frame = +1
Query: 847 HESILNRPGLGNVVFQSNRI------LSPED--ISGSKREFGFKMPSXXXXXXXXXXXXX 1002
H+S+ RPGLG +VF+ N + L ED + G+ G ++ S
Sbjct: 304 HDSLFTRPGLGTMVFRRNYLSSGLHGLGREDAALDGAGPPRG-RLQSSTSLDDDSLGSAN 362
Query: 1003 XXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLEEFLPIFMREQIDLEALLLC 1182
+PLE FL S H+E+F + +E+IDLEAL+LC
Sbjct: 363 SLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFTSLLRQEKIDLEALMLC 422
Query: 1183 SDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
SD DL+SI + LGPRKK+L A+ RR+Q L++P L DT L
Sbjct: 423 SDLDLRSISVPLGPRKKILGAVRRRRQALERPPALEDTEL 462
>ref|NP_001192889.1| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Bos taurus].
Length = 1053
Score = 74.3 bits (181), Expect = 2e-13
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 ASDSYLELLKEATRRDLNLSDEDG---MTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AS++ L++L E + D+ L+D D ++P LAAYHG+ ALE++ D D + G
Sbjct: 525 ASETPLDVLMETSGTDM-LNDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSG 583
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDL-QSPLDAAASREQNECVALLDKAATAQ 423
TPL AA GH CV LIN GA+I D L ++P+ AAA+ +EC+ LL A Q
Sbjct: 584 RTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ 643
Query: 424 NIMN 435
N ++
Sbjct: 644 NAVD 647
Score = 61.6 bits (148), Expect = 2e-09
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK-----EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA++ + E L+ + +++ D +G TP +L+ +G+ + + ++G +
Sbjct: 619 TPIHAAATNGHSECLRLLIGNAEPQNAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGAN 678
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVAL 399
D D WG T LH A GH CV L+ GAN D+ ++P+ +AA AL
Sbjct: 679 VDAKDRWGRTALHRGAVTGHEECVDALLQHGANCLFRDSRGRTPIHLSAACGHIGVLGAL 738
Query: 400 LDKAAT 417
L AA+
Sbjct: 739 LQSAAS 744
Score = 57.4 bits (137), Expect = 3e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++ D+ G T AA GNL L ++ + G D ++ D +G +PLHYAA+N + C+
Sbjct: 397 DIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFA 456
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
L+ GA++ LD +PL AA S +C+ L
Sbjct: 457 LVGSGASVNDLDERGCTPLHYAATSDTDGKCLEYL 491
Score = 54.3 bits (129), Expect = 3e-07
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 43 SRKMSTRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICS 210
+ K T H AA+ ++ LELL D+N+ +DG TP + A HG + I
Sbjct: 269 NEKGFTPLHFAAASTHGALCLELLV-GNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQ 327
Query: 211 RGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
G D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 328 SGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDC 387
Score = 53.5 bits (127), Expect = 4e-07
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
GM P LAA G + S G D D D +G T LH AA+ G+ C++ L+N GA+
Sbjct: 372 GMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADF 431
Query: 325 FALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRL 456
D +SPL AA+ +C+ L + + N ++ + T L
Sbjct: 432 NKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL 475
Score = 53.1 bits (126), Expect = 6e-07
Identities = 34/127 (26%), Positives = 57/127 (44%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCV 294
+ D+N D + TP AAY G+ +E++ G + D TPLH A ++ V
Sbjct: 31 KEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEEAV 90
Query: 295 SFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQK 474
L+ A++ A D + Q+PL AA+ + +C L + N+ + T L A
Sbjct: 91 QVLLKHSADVNARDKNWQTPLHTAAANKAVKCAEALVPLLSNVNVSDRAGRTALHHAALS 150
Query: 475 NARKQIK 495
+ +K
Sbjct: 151 GHGEMVK 157
Score = 52.0 bits (123), Expect = 1e-06
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +1
Query: 67 HQAASDSYLELLK--EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDI 240
H AA ++E++K A ++ D+ TP AA G + ++ + G D + +
Sbjct: 178 HWAAYMGHIEVVKLLVAHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNA 237
Query: 241 WGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
+GNTPLH A NG V+ LI+ GAN+ + +PL AAAS C+ LL
Sbjct: 238 YGNTPLHVACYNGQDVVVNELIDSGANVNQKNEKGFTPLHFAAASTHGALCLELL 292
Score = 50.1 bits (118), Expect = 5e-06
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N +D G TP AA+ ++ L+++ S + D G TPL AA NG + V L
Sbjct: 816 VNATDSKGRTPLHAAAFTDHVECLQLLLSHNAHVNSVDSSGKTPLMMAAENGQTNTVEML 875
Query: 304 I-NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMN 435
+ + A++ DN + L A S+ L+ + T +N++N
Sbjct: 876 VSSASADLTLQDNSKNTALHLACSKGHETSALLILEKITDRNLIN 920
Score = 49.3 bits (116), Expect = 8e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 133 SDEDGMTPTLLAAYHGNLGALEIICSRGGDP--DRCDIWGNTPLHYAASNGHAHCVSFLI 306
++ + +P A + N GA E++ G + D G TPLH AA H C+ L+
Sbjct: 784 TEGNAFSPLHCAVINDNEGAAEMLIDTLGSSIVNATDSKGRTPLHAAAFTDHVECLQLLL 843
Query: 307 NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATA 420
+ A++ ++D+ ++PL AA Q V +L +A+A
Sbjct: 844 SHNAHVNSVDSSGKTPLMMAAENGQTNTVEMLVSSASA 881
>ref|XP_002685223.1| PREDICTED: UNCoordinated family member (unc-44)-like [Bos taurus].
Length = 1053
Score = 74.3 bits (181), Expect = 2e-13
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 ASDSYLELLKEATRRDLNLSDEDG---MTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AS++ L++L E + D+ L+D D ++P LAAYHG+ ALE++ D D + G
Sbjct: 525 ASETPLDVLMETSGTDM-LNDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSG 583
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDL-QSPLDAAASREQNECVALLDKAATAQ 423
TPL AA GH CV LIN GA+I D L ++P+ AAA+ +EC+ LL A Q
Sbjct: 584 RTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ 643
Query: 424 NIMN 435
N ++
Sbjct: 644 NAVD 647
Score = 61.6 bits (148), Expect = 2e-09
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK-----EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA++ + E L+ + +++ D +G TP +L+ +G+ + + ++G +
Sbjct: 619 TPIHAAATNGHSECLRLLIGNAEPQNAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGAN 678
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVAL 399
D D WG T LH A GH CV L+ GAN D+ ++P+ +AA AL
Sbjct: 679 VDAKDRWGRTALHRGAVTGHEECVDALLQHGANCLFRDSRGRTPIHLSAACGHIGVLGAL 738
Query: 400 LDKAAT 417
L AA+
Sbjct: 739 LQSAAS 744
Score = 57.4 bits (137), Expect = 3e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++ D+ G T AA GNL L ++ + G D ++ D +G +PLHYAA+N + C+
Sbjct: 397 DIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFA 456
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
L+ GA++ LD +PL AA S +C+ L
Sbjct: 457 LVGSGASVNDLDERGCTPLHYAATSDTDGKCLEYL 491
Score = 54.3 bits (129), Expect = 3e-07
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 43 SRKMSTRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICS 210
+ K T H AA+ ++ LELL D+N+ +DG TP + A HG + I
Sbjct: 269 NEKGFTPLHFAAASTHGALCLELLV-GNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQ 327
Query: 211 RGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
G D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 328 SGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDC 387
Score = 53.5 bits (127), Expect = 4e-07
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
GM P LAA G + S G D D D +G T LH AA+ G+ C++ L+N GA+
Sbjct: 372 GMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADF 431
Query: 325 FALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRL 456
D +SPL AA+ +C+ L + + N ++ + T L
Sbjct: 432 NKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL 475
Score = 53.1 bits (126), Expect = 6e-07
Identities = 34/127 (26%), Positives = 57/127 (44%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCV 294
+ D+N D + TP AAY G+ +E++ G + D TPLH A ++ V
Sbjct: 31 KEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEEAV 90
Query: 295 SFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQK 474
L+ A++ A D + Q+PL AA+ + +C L + N+ + T L A
Sbjct: 91 QVLLKHSADVNARDKNWQTPLHTAAANKAVKCAEALVPLLSNVNVSDRAGRTALHHAALS 150
Query: 475 NARKQIK 495
+ +K
Sbjct: 151 GHGEMVK 157
Score = 52.0 bits (123), Expect = 1e-06
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +1
Query: 67 HQAASDSYLELLK--EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDI 240
H AA ++E++K A ++ D+ TP AA G + ++ + G D + +
Sbjct: 178 HWAAYMGHIEVVKLLVAHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNA 237
Query: 241 WGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
+GNTPLH A NG V+ LI+ GAN+ + +PL AAAS C+ LL
Sbjct: 238 YGNTPLHVACYNGQDVVVNELIDSGANVNQKNEKGFTPLHFAAASTHGALCLELL 292
Score = 50.1 bits (118), Expect = 5e-06
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N +D G TP AA+ ++ L+++ S + D G TPL AA NG + V L
Sbjct: 816 VNATDSKGRTPLHAAAFTDHVECLQLLLSHNAHVNSVDSSGKTPLMMAAENGQTNTVEML 875
Query: 304 I-NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMN 435
+ + A++ DN + L A S+ L+ + T +N++N
Sbjct: 876 VSSASADLTLQDNSKNTALHLACSKGHETSALLILEKITDRNLIN 920
Score = 49.3 bits (116), Expect = 8e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +1
Query: 133 SDEDGMTPTLLAAYHGNLGALEIICSRGGDP--DRCDIWGNTPLHYAASNGHAHCVSFLI 306
++ + +P A + N GA E++ G + D G TPLH AA H C+ L+
Sbjct: 784 TEGNAFSPLHCAVINDNEGAAEMLIDTLGSSIVNATDSKGRTPLHAAAFTDHVECLQLLL 843
Query: 307 NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATA 420
+ A++ ++D+ ++PL AA Q V +L +A+A
Sbjct: 844 SHNAHVNSVDSSGKTPLMMAAENGQTNTVEMLVSSASA 881
>ref|XP_002685395.1| PREDICTED: rolling pebbles-like [Bos taurus].
Length = 1850
Score = 67.8 bits (164), Expect = 2e-11
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+NLSD+ G TP ++AA G+L +E + S+G D G + L +A GH V F
Sbjct: 1139 DVNLSDKQGRTPLMVAACEGHLSTVEFLLSKGATLSSLDKEGLSALSWACLKGHRAVVQF 1198
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVA-LLDKAATAQNI 429
L+ GA I D + +SPLD AA E V L+DK A +++
Sbjct: 1199 LVEEGAEIDQTDKNGRSPLDLAAFYGDAETVLYLVDKGAVIEHV 1242
>ref|XP_584693.3| PREDICTED: tetratricopeptide repeat, ankyrin repeat and coiled-coil
containing 1, partial [Bos taurus].
Length = 1621
Score = 67.8 bits (164), Expect = 2e-11
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+NLSD+ G TP ++AA G+L +E + S+G D G + L +A GH V F
Sbjct: 910 DVNLSDKQGRTPLMVAACEGHLSTVEFLLSKGATLSSLDKEGLSALSWACLKGHRAVVQF 969
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVA-LLDKAATAQNI 429
L+ GA I D + +SPLD AA E V L+DK A +++
Sbjct: 970 LVEEGAEIDQTDKNGRSPLDLAAFYGDAETVLYLVDKGAVIEHV 1013
>ref|NP_001192878.1| ankyrin repeat domain-containing protein 50 [Bos taurus].
Length = 1429
Score = 67.4 bits (163), Expect = 3e-11
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D+DGMTP L+AAY G++ ++++ G D D D G TPL AAS GHA V+ L+ +G
Sbjct: 745 DKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWG 804
Query: 316 ANIFALDNDLQSPLDAAASREQNECV-ALLDK 408
A + ++D++ ++ L A+++ E V LLD+
Sbjct: 805 AAVDSIDSEGRTVLSIASAQGNVEVVRTLLDR 836
Score = 61.6 bits (148), Expect = 2e-09
Identities = 42/115 (36%), Positives = 56/115 (48%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N D +G T AAY GNL + ++ SRG D + D G+TPL AA GH V+ L
Sbjct: 538 VNQCDSNGRTLLANAAYSGNLDVVNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCL 597
Query: 304 INFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
I GANI D D + L +AA E V+ L A + + T L+ A
Sbjct: 598 IGCGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSRTALRAAA 652
Score = 55.5 bits (132), Expect = 1e-07
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAY-----HGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHA 285
++N D DG T +AA G+ + ++ RG + D CD G TPL AA GH
Sbjct: 702 EVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHV 761
Query: 286 HCVSFLINFGANIFALDNDLQSPLDAAASREQNECV-ALLDKAATAQNIMNPKKVTRLKE 462
V L+ GA++ DN+ ++PL AAAS V LL A +I + +
Sbjct: 762 DVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIA 821
Query: 463 QAQKNARKQIKECER-LQEKHQN 528
AQ N +R L E H++
Sbjct: 822 SAQGNVEVVRTLLDRGLDENHRD 844
Score = 53.1 bits (126), Expect = 6e-07
Identities = 31/89 (34%), Positives = 43/89 (48%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D +G T +A+ GN+ + + RG D + D G TPLH AA GH LI G
Sbjct: 811 DSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQG 870
Query: 316 ANIFALDNDLQSPLDAAASREQNECVALL 402
A +DND + P A+ +CV +L
Sbjct: 871 ARTNEIDNDGRIPFILASQEGHYDCVQIL 899
Score = 51.6 bits (122), Expect = 2e-06
Identities = 30/94 (31%), Positives = 43/94 (45%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D DG + A L E G + + D G T LH + GH V
Sbjct: 938 DVNYKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHLEMVQV 997
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALL 402
LI + A++ A DN+ +S L +AA + + V LL
Sbjct: 998 LITYHADVNAADNEKRSALQSAAWQGHVKVVQLL 1031
>ref|XP_002694440.1| PREDICTED: rolling pebbles-like [Bos taurus].
Length = 1429
Score = 67.4 bits (163), Expect = 3e-11
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D+DGMTP L+AAY G++ ++++ G D D D G TPL AAS GHA V+ L+ +G
Sbjct: 745 DKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWG 804
Query: 316 ANIFALDNDLQSPLDAAASREQNECV-ALLDK 408
A + ++D++ ++ L A+++ E V LLD+
Sbjct: 805 AAVDSIDSEGRTVLSIASAQGNVEVVRTLLDR 836
Score = 61.6 bits (148), Expect = 2e-09
Identities = 42/115 (36%), Positives = 56/115 (48%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N D +G T AAY GNL + ++ SRG D + D G+TPL AA GH V+ L
Sbjct: 538 VNQCDSNGRTLLANAAYSGNLDVVNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCL 597
Query: 304 INFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
I GANI D D + L +AA E V+ L A + + T L+ A
Sbjct: 598 IGCGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSRTALRAAA 652
Score = 55.5 bits (132), Expect = 1e-07
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAY-----HGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHA 285
++N D DG T +AA G+ + ++ RG + D CD G TPL AA GH
Sbjct: 702 EVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHV 761
Query: 286 HCVSFLINFGANIFALDNDLQSPLDAAASREQNECV-ALLDKAATAQNIMNPKKVTRLKE 462
V L+ GA++ DN+ ++PL AAAS V LL A +I + +
Sbjct: 762 DVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIA 821
Query: 463 QAQKNARKQIKECER-LQEKHQN 528
AQ N +R L E H++
Sbjct: 822 SAQGNVEVVRTLLDRGLDENHRD 844
Score = 53.1 bits (126), Expect = 6e-07
Identities = 31/89 (34%), Positives = 43/89 (48%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D +G T +A+ GN+ + + RG D + D G TPLH AA GH LI G
Sbjct: 811 DSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQG 870
Query: 316 ANIFALDNDLQSPLDAAASREQNECVALL 402
A +DND + P A+ +CV +L
Sbjct: 871 ARTNEIDNDGRIPFILASQEGHYDCVQIL 899
Score = 51.6 bits (122), Expect = 2e-06
Identities = 30/94 (31%), Positives = 43/94 (45%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D DG + A L E G + + D G T LH + GH V
Sbjct: 938 DVNYKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHLEMVQV 997
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALL 402
LI + A++ A DN+ +S L +AA + + V LL
Sbjct: 998 LITYHADVNAADNEKRSALQSAAWQGHVKVVQLL 1031
>ref|NP_001070395.1| ankyrin repeat and SOCS box protein 3 [Bos taurus].
Length = 525
Score = 63.2 bits (152), Expect = 6e-10
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Frame = +1
Query: 67 HQAASDSYLELLKEATRRDLN--LSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDI 240
HQA+ E++K ++ N D+ G+TP +AA +G L +L I+ S G D + +
Sbjct: 151 HQASFQGNAEIIKLLLKKGANKECQDDFGITPLFVAAQYGKLESLSILISSGADVNCQAL 210
Query: 241 WGNTPLHYAASNGHAHCVSFLINFGA--NIFALDNDLQSPLDAAASREQNECVALLDKAA 414
TPL AA GH CV L++ GA +++ +++ Q P+ AAA + + LL
Sbjct: 211 DKATPLFIAAQEGHTECVELLLSSGADPDLYCNEDNWQLPIHAAAQMGHTKILDLLIPLT 270
Query: 415 TAQNIMNPKKVT 450
P KV+
Sbjct: 271 NRVCDTGPNKVS 282
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 49,976,734
Number of extensions: 1267401
Number of successful extensions: 4912
Number of sequences better than 1.0e-05: 98
Number of HSP's gapped: 4653
Number of HSP's successfully gapped: 168
Length of query: 473
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 367
Effective length of database: 14,174,046
Effective search space: 5201874882
Effective search space used: 5201874882
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009111
(1419 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_547100.2| PREDICTED: similar to harmonin-interacting anky... 557 e-159
Alignment gi|XP_852112.1| PREDICTED: similar to Usher syndrome 1G protein... 254 1e-67
Alignment gi|XP_534254.2| PREDICTED: similar to ankyrin repeat domain 28 ... 74 3e-13
Alignment gi|XP_540955.2| PREDICTED: similar to CG10011-PA isoform 1 [Can... 67 3e-11
Alignment gi|XP_856838.1| PREDICTED: similar to CG10011-PA isoform 2 [Can... 67 3e-11
Alignment gi|XP_544123.2| PREDICTED: similar to transient receptor potent... 64 3e-10
Alignment gi|XP_536014.2| PREDICTED: similar to ankyrin repeat domain 28 ... 64 5e-10
Alignment gi|XP_535925.2| PREDICTED: similar to TPR domain, ankyrin-repea... 62 1e-09
Alignment gi|NP_001191984.1| ankyrin repeat and SOCS box protein 3 [Canis... 60 4e-09
Alignment gi|XP_532805.2| PREDICTED: similar to DDHD domain containing 2 ... 60 4e-09
>ref|XP_547100.2| PREDICTED: similar to harmonin-interacting ankyrin-repeat containing
protein [Canis familiaris].
Length = 417
Score = 557 bits (1436), Expect = e-159
Identities = 299/421 (71%), Positives = 312/421 (74%), Gaps = 4/421 (0%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNL ALEIICSRGGDP+R
Sbjct: 1 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLEALEIICSRGGDPNR 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLHYAASNGH HCVSFL+NFGANIFALDN LQSPLDAAASREQNECVALLDKA
Sbjct: 61 CDIWGNTPLHYAASNGHTHCVSFLVNFGANIFALDNSLQSPLDAAASREQNECVALLDKA 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTYXXXXXXXXXXXXXXX 591
AT QNIMNPKKVTRLKEQAQKNAR+QIKECERLQEKHQNKMAR Y
Sbjct: 121 ATTQNIMNPKKVTRLKEQAQKNARRQIKECERLQEKHQNKMARNYSKEESGTLSSSNGTF 180
Query: 592 XXXXXXXXXXXXXXXXLSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRNVMEMFKXXXXX 771
LSK IKDTFKLK KKNKDTAEQVGKESRSGQRNVME+F+
Sbjct: 181 SRSSLANASASGTFGSLSKGIKDTFKLKLKKNKDTAEQVGKESRSGQRNVMEVFR----E 236
Query: 772 XXXXKFSGDFKEKLQFSLKGDSYVQHESILNRPGLGNVVFQSNRILSPEDISGSKREFGF 951
FSGDF+EK QFS + D VQHESILNRPGLGN+VF+ N+I SPED+S KR F
Sbjct: 237 EEEDAFSGDFQEKPQFSAEDDGCVQHESILNRPGLGNIVFRKNKISSPEDMSDIKRGLEF 296
Query: 952 KMPS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHH 1119
KM S ATPLEVFLQSHH
Sbjct: 297 KMCSELLQGQGAAEVDEAEADKEGEENNHDDDLPWDEDEVGWEEDVVDATPLEVFLQSHH 356
Query: 1120 LEEFLPIFMREQIDLEALLLCSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTS 1299
LEEFLPIFMREQIDLEALLLCSDEDLQ I M LGPRKKVLN INRRKQVL++PGQLVDTS
Sbjct: 357 LEEFLPIFMREQIDLEALLLCSDEDLQGIHMHLGPRKKVLNVINRRKQVLREPGQLVDTS 416
Query: 1300 L 1302
L
Sbjct: 417 L 417
>ref|XP_852112.1| PREDICTED: similar to Usher syndrome 1G protein [Canis familiaris].
Length = 457
Score = 254 bits (649), Expect = 1e-67
Identities = 161/460 (35%), Positives = 219/460 (47%), Gaps = 43/460 (9%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
M+ +YH+AA D YLELLKEATR++LN DEDGMTPTL AAYHGNL +L +I SRGGDPD+
Sbjct: 1 MNDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDK 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLH AASNGH HC+SFL++FGANI+ LDND +PLD AA + ECV LD
Sbjct: 61 CDIWGNTPLHLAASNGHLHCLSFLVSFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSI 120
Query: 412 ATAQNIMNP-----------KKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTYXXXX 558
A Q+ +NP ++ R + K RK + ER + + + +
Sbjct: 121 AAKQSSLNPKLVGKLKDKAFREAERRIRECAKMQRKHHERMERRYRRERAERSDALSFSS 180
Query: 559 XXXXXXXXXXXXXXXXXXXXXXXXXXXLSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRN 738
+ K + K ++ K E K S G+++
Sbjct: 181 LTSSTLSRRLQHLALGSQLPYSQATLHGTARGKGKIQRKLERRKQGGEGTFKISEDGRKS 240
Query: 739 VMEMFKXXXXXXXXXKFSGDFKEKLQFS--------LKGDSYVQ---------------- 846
V + G + ++ L + V
Sbjct: 241 VRSLSGLQLGSDVMFVRQGTYANPKEWGRSPLRDMFLSDEDSVSRATLAAEPAHSEVSTD 300
Query: 847 --HESILNRPGLGNVVFQSNRI------LSPEDISGSKREFGFKMPSXXXXXXXXXXXXX 1002
H+S+ RPGLG +VF+ N + L ED G+ R ++ S
Sbjct: 301 SGHDSLFTRPGLGTMVFRRNYLSSGLHGLGREDAEGAPRG---RLQSSPSLDDDSLGSAN 357
Query: 1003 XXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLEEFLPIFMREQIDLEALLLC 1182
+PLE FL S H+E+F + +E+IDLEAL+LC
Sbjct: 358 SLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFTSLLRQEKIDLEALMLC 417
Query: 1183 SDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
SD DL+SI + LGPRKK+L A+ RR+Q L++P L DT L
Sbjct: 418 SDLDLRSISVPLGPRKKILGAVRRRRQALERPPALEDTEL 457
>ref|XP_534254.2| PREDICTED: similar to ankyrin repeat domain 28 [Canis familiaris].
Length = 1053
Score = 74.3 bits (181), Expect = 3e-13
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 ASDSYLELLKEATRRDLNLSDEDG---MTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AS++ L++L E + D+ L+D D ++P LAAYHG+ ALE++ D D + G
Sbjct: 525 ASETPLDVLMETSGTDM-LNDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSG 583
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDL-QSPLDAAASREQNECVALLDKAATAQ 423
TPL AA GH CV LIN GA+I D L ++P+ AAA+ +EC+ LL A Q
Sbjct: 584 RTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ 643
Query: 424 NIMN 435
N ++
Sbjct: 644 NAVD 647
Score = 59.3 bits (142), Expect = 9e-09
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK-----EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA++ + E L+ + +++ D +G TP +L+ +G+ + + ++G +
Sbjct: 619 TPIHAAATNGHSECLRLLIGNAEPQNAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGAN 678
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVAL 399
D D WG T LH A GH CV L+ GA D+ ++P+ +AA AL
Sbjct: 679 VDAKDKWGRTALHRGAVTGHEECVDALLQHGAKCLFRDSRGRTPIHLSAACGHIGVLGAL 738
Query: 400 LDKAAT 417
L AA+
Sbjct: 739 LQSAAS 744
Score = 57.4 bits (137), Expect = 3e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++ D+ G T AA GNL L ++ + G D ++ D +G +PLHYAA+N + C+
Sbjct: 397 DIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFA 456
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
L+ GA++ LD +PL AA S +C+ L
Sbjct: 457 LVGSGASVNDLDERGCTPLHYAATSDTDGKCLEYL 491
Score = 54.3 bits (129), Expect = 3e-07
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 43 SRKMSTRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICS 210
+ K T H AA+ ++ LELL D+N+ +DG TP + A HG + I
Sbjct: 269 NEKGFTPLHFAAASTHGALCLELLV-GNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQ 327
Query: 211 RGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
G D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 328 SGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDC 387
Score = 53.5 bits (127), Expect = 5e-07
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
GM P LAA G + S G D D D +G T LH AA+ G+ C++ L+N GA+
Sbjct: 372 GMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADF 431
Query: 325 FALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRL 456
D +SPL AA+ +C+ L + + N ++ + T L
Sbjct: 432 NKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL 475
Score = 52.4 bits (124), Expect = 1e-06
Identities = 34/127 (26%), Positives = 57/127 (44%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCV 294
+ D+N D + TP AAY G+ +E++ G + D TPLH A ++ V
Sbjct: 31 KEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEEAV 90
Query: 295 SFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQK 474
L+ A++ A D + Q+PL AA+ + +C L + N+ + T L A
Sbjct: 91 QVLLKHSADVNARDKNWQTPLHIAAANKAVKCAEALVPLLSNVNVSDRAGRTALHHAAFS 150
Query: 475 NARKQIK 495
+ +K
Sbjct: 151 GHGEMVK 157
Score = 52.0 bits (123), Expect = 1e-06
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +1
Query: 67 HQAASDSYLELLK--EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDI 240
H AA ++E++K A ++ D+ TP AA G + ++ + G D + +
Sbjct: 178 HWAAYMGHIEVVKLLVAHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNA 237
Query: 241 WGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
+GNTPLH A NG V+ LI+ GAN+ + +PL AAAS C+ LL
Sbjct: 238 YGNTPLHVACYNGQDVVVNELIDCGANVNQKNEKGFTPLHFAAASTHGALCLELL 292
Score = 50.4 bits (119), Expect = 4e-06
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N +D G TP AA+ ++ L+++ S + D G TPL AA NG + V L
Sbjct: 816 VNATDSKGRTPLHAAAFTDHVECLQLLLSHNAQVNSIDSSGKTPLMMAAENGQTNTVEML 875
Query: 304 I-NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMN 435
+ + A++ DN + L A S+ L+ + T +N++N
Sbjct: 876 VSSASADLTLQDNSKNTALHLACSKGHETSALLILEKITDRNLIN 920
Score = 49.3 bits (116), Expect = 9e-06
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
++N+SD G T AA+ G+ ++++ SRG + + D +H+AA GH V
Sbjct: 132 NVNVSDRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKL 191
Query: 301 LINFGANIFALDNDLQSPLDAAAS 372
L+ GA + D +PL AAAS
Sbjct: 192 LVAHGAEVTCKDKKSYTPLHAAAS 215
>ref|XP_540955.2| PREDICTED: similar to CG10011-PA isoform 1 [Canis familiaris].
Length = 1429
Score = 67.4 bits (163), Expect = 3e-11
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D+DGMTP L+AAY G++ ++++ G D D D G TPL AAS GHA V+ L+ +G
Sbjct: 745 DKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWG 804
Query: 316 ANIFALDNDLQSPLDAAASREQNECV-ALLDK 408
A + ++D++ ++ L A+++ E V LLD+
Sbjct: 805 AAVDSIDSEGRTVLSIASAQGNVEVVRTLLDR 836
Score = 61.6 bits (148), Expect = 2e-09
Identities = 42/115 (36%), Positives = 56/115 (48%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N D +G T AAY GNL + ++ SRG D + D G+TPL AA GH V+ L
Sbjct: 538 VNQCDSNGRTLLANAAYSGNLDVVNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCL 597
Query: 304 INFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
I GANI D D + L +AA E V+ L A + + T L+ A
Sbjct: 598 IGCGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSRTALRAAA 652
Score = 55.5 bits (132), Expect = 1e-07
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAY-----HGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHA 285
++N D DG T +AA G+ + ++ RG + D CD G TPL AA GH
Sbjct: 702 EVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHV 761
Query: 286 HCVSFLINFGANIFALDNDLQSPLDAAASREQNECV-ALLDKAATAQNIMNPKKVTRLKE 462
V L+ GA++ DN+ ++PL AAAS V LL A +I + +
Sbjct: 762 DVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIA 821
Query: 463 QAQKNARKQIKECER-LQEKHQN 528
AQ N +R L E H++
Sbjct: 822 SAQGNVEVVRTLLDRGLDENHRD 844
Score = 53.1 bits (126), Expect = 6e-07
Identities = 31/89 (34%), Positives = 43/89 (48%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D +G T +A+ GN+ + + RG D + D G TPLH AA GH LI G
Sbjct: 811 DSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQG 870
Query: 316 ANIFALDNDLQSPLDAAASREQNECVALL 402
A +DND + P A+ +CV +L
Sbjct: 871 ARTNEIDNDGRIPFILASQEGHYDCVQIL 899
Score = 52.0 bits (123), Expect = 1e-06
Identities = 31/94 (32%), Positives = 43/94 (45%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D DG + A L E G + + D G T LH + GH V
Sbjct: 938 DVNYKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHLEMVQV 997
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALL 402
LI + A+I A DN+ +S L +AA + + V LL
Sbjct: 998 LITYHADINAADNEKRSALQSAAWQGHVKVVQLL 1031
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
G T +AA G++ ++++ G DP+ D +G T + AA NGH+ + L +GA+
Sbjct: 1045 GATALCIAAQEGHIDVVQVLLEHGADPNHADQFGRTAMRVAAKNGHSQIIKLLEKYGASS 1104
Query: 325 F------ALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNP 438
+ Q PL + +S+ Q+ + +T M P
Sbjct: 1105 LNGCSPSPVHTMEQKPLQSVSSKMQSLTIKSNSSGSTGGGDMQP 1148
>ref|XP_856838.1| PREDICTED: similar to CG10011-PA isoform 2 [Canis familiaris].
Length = 1437
Score = 67.4 bits (163), Expect = 3e-11
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D+DGMTP L+AAY G++ ++++ G D D D G TPL AAS GHA V+ L+ +G
Sbjct: 753 DKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWG 812
Query: 316 ANIFALDNDLQSPLDAAASREQNECV-ALLDK 408
A + ++D++ ++ L A+++ E V LLD+
Sbjct: 813 AAVDSIDSEGRTVLSIASAQGNVEVVRTLLDR 844
Score = 61.6 bits (148), Expect = 2e-09
Identities = 42/115 (36%), Positives = 56/115 (48%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N D +G T AAY GNL + ++ SRG D + D G+TPL AA GH V+ L
Sbjct: 546 VNQCDSNGRTLLANAAYSGNLDVVNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCL 605
Query: 304 INFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
I GANI D D + L +AA E V+ L A + + T L+ A
Sbjct: 606 IGCGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSRTALRAAA 660
Score = 55.5 bits (132), Expect = 1e-07
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAY-----HGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHA 285
++N D DG T +AA G+ + ++ RG + D CD G TPL AA GH
Sbjct: 710 EVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHV 769
Query: 286 HCVSFLINFGANIFALDNDLQSPLDAAASREQNECV-ALLDKAATAQNIMNPKKVTRLKE 462
V L+ GA++ DN+ ++PL AAAS V LL A +I + +
Sbjct: 770 DVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIA 829
Query: 463 QAQKNARKQIKECER-LQEKHQN 528
AQ N +R L E H++
Sbjct: 830 SAQGNVEVVRTLLDRGLDENHRD 852
Score = 53.1 bits (126), Expect = 6e-07
Identities = 31/89 (34%), Positives = 43/89 (48%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D +G T +A+ GN+ + + RG D + D G TPLH AA GH LI G
Sbjct: 819 DSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQG 878
Query: 316 ANIFALDNDLQSPLDAAASREQNECVALL 402
A +DND + P A+ +CV +L
Sbjct: 879 ARTNEIDNDGRIPFILASQEGHYDCVQIL 907
Score = 52.0 bits (123), Expect = 1e-06
Identities = 31/94 (32%), Positives = 43/94 (45%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D DG + A L E G + + D G T LH + GH V
Sbjct: 946 DVNYKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHLEMVQV 1005
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALL 402
LI + A+I A DN+ +S L +AA + + V LL
Sbjct: 1006 LITYHADINAADNEKRSALQSAAWQGHVKVVQLL 1039
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
G T +AA G++ ++++ G DP+ D +G T + AA NGH+ + L +GA+
Sbjct: 1053 GATALCIAAQEGHIDVVQVLLEHGADPNHADQFGRTAMRVAAKNGHSQIIKLLEKYGASS 1112
Query: 325 F------ALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNP 438
+ Q PL + +S+ Q+ + +T M P
Sbjct: 1113 LNGCSPSPVHTMEQKPLQSVSSKMQSLTIKSNSSGSTGGGDMQP 1156
>ref|XP_544123.2| PREDICTED: similar to transient receptor potential cation channel,
subfamily A, member 1 [Canis familiaris].
Length = 1118
Score = 64.3 bits (155), Expect = 3e-10
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Frame = +1
Query: 70 QAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGN 249
Q + +++L E D+NL E+G T ++A N AL+I+ ++G P + + WG
Sbjct: 141 QGLHNEVIKVLTEHNSTDINLEGENGNTAVIIACLKDNSEALQILLNKGAKPCKSNKWGC 200
Query: 250 TPLHYAASNGHAHCVSFLINFG--------ANIFALDNDLQSPLDAAASREQNECVAL-L 402
P+H AA +G C+ ++ FG ++I ++N SPL A E + + L
Sbjct: 201 FPIHQAAFSGAKKCMEIILKFGEEHGYSRQSHINFVNNGKSSPLHMAVQSGDLEMIKMCL 260
Query: 403 DKAATAQNIMNPKKVTRLKEQAQKNARKQIK 495
D A + +M K T L A + A + +K
Sbjct: 261 DNGAHLE-LMENGKCTPLHFAATQGATEIVK 290
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDP--DRCDIWGNTPLHYAASNGHAH 288
R+ LN D +P AA G + +E+I S + D +GNTPLH+AA
Sbjct: 54 RKKLNKYDNMNTSPLHHAAEEGQVELMEMIISDSSFEVLNVMDDYGNTPLHWAAEKNQVE 113
Query: 289 CVSFLINFGANIFALDNDLQSPLDAAASREQNECVALL 402
V FL++ GAN ++++ +PL A NE + +L
Sbjct: 114 SVKFLLSKGANPNLRNSNMMAPLHIAVQGLHNEVIKVL 151
>ref|XP_536014.2| PREDICTED: similar to ankyrin repeat domain 28 [Canis familiaris].
Length = 1243
Score = 63.5 bits (153), Expect = 5e-10
Identities = 38/120 (31%), Positives = 64/120 (53%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
+++ D+ G T AA GN+ ++++ S G D + D G TPLHYAA+N H HC+
Sbjct: 584 EIDTPDKFGRTCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRTPLHYAAANCHFHCIET 643
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQKNA 480
L+ GAN+ D+ ++ L AA+ + + +L A N +++ R +E +K A
Sbjct: 644 LVTTGANVNETDDWGRTALHYAAASDMDRNKTILGNAHE-----NSEELERARELKEKEA 698
Score = 61.6 bits (148), Expect = 2e-09
Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Frame = +1
Query: 67 HQAASDSY---LELLKEATRRDLNLSDEDGM-TPTLLAAYHGNLGALEIICSRGGDPDRC 234
H AA+ + LELL E T SD +P LAAY+G+ A+E++ D D
Sbjct: 724 HYAAAYGHRQCLELLLERTNNGFEDSDSGATKSPLHLAAYNGHHQAVEVLLQSLVDLDIR 783
Query: 235 DIWGNTPLHYAASNGHAHCVSFLINFGANIFALDN-DLQSPLDAAASREQNECVALL 402
D G T L AA GH CV LIN GA+IF DN ++PL A+ C+ LL
Sbjct: 784 DEKGRTALDLAAFKGHTECVEALINQGASIFVKDNVTKRTPLHASVINGHTLCLRLL 840
Score = 60.1 bits (144), Expect = 5e-09
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Frame = +1
Query: 58 TRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDP 225
T H AA+ ++ LELL D+N+ +DG +P + A HG + + GG+
Sbjct: 443 TPLHFAAASTHGALCLELLVN-NGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEI 501
Query: 226 DRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLD 405
D D GNTPLH AA GH ++ LI GA+ PL AA ++C L
Sbjct: 502 DCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDCCRKLL 561
Query: 406 KAATAQNIMN 435
+ +I++
Sbjct: 562 SSGQKYSIVS 571
Score = 56.6 bits (135), Expect = 6e-08
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N D+ G TP AA+ ++ L+++ + + D G T L AA NG A V L
Sbjct: 1019 VNCRDDKGRTPLHAAAFADHVECLQLLLRHNAEVNAADNSGKTALMMAAENGQAGAVDIL 1078
Query: 304 INFG-ANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPK 441
+N A++ D DL +PL A+S+ +C L+ ++++N K
Sbjct: 1079 VNSAQADLTVKDKDLNTPLHLASSKGHEKCALLILDKIQDESLINAK 1125
Score = 55.8 bits (133), Expect = 1e-07
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+++ D G TP +LA +G++ A+ ++ + + D DI G T LH GH CV L
Sbjct: 850 IDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANVDAVDIMGCTALHRGIMTGHEECVQML 909
Query: 304 INFGANIFALDNDLQSPLDAAASR 375
+ +I D+ ++PL AA+R
Sbjct: 910 LEQEVSILCKDSRGRTPLHYAAAR 933
Score = 55.1 bits (131), Expect = 2e-07
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
++ D+ G TP AA +G + ++ + + G + D +I+GNT LH A NG V+
Sbjct: 367 EVTCKDKKGYTPLHAAASNGQINVVKHLLNLGVEIDEINIYGNTALHLACYNGQDAVVNE 426
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALLDKAATAQNIMN 435
L ++GAN+ +N +PL AAAS C+ LL NI +
Sbjct: 427 LTDYGANVNQPNNSGFTPLHFAAASTHGALCLELLVNNGADVNIQS 472
Score = 53.9 bits (128), Expect = 4e-07
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Frame = +1
Query: 49 KMSTRYHQAASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIIC-SRGG 219
K T H AA ++E L+ R ++N +D G T ++AA +G GA++I+ S
Sbjct: 1025 KGRTPLHAAAFADHVECLQLLLRHNAEVNAADNSGKTALMMAAENGQAGAVDILVNSAQA 1084
Query: 220 DPDRCDIWGNTPLHYAASNGHAHCVSFL---INFGANIFALDNDLQSPLDAAA 369
D D NTPLH A+S GH C + I + I A +N LQ+PL AA
Sbjct: 1085 DLTVKDKDLNTPLHLASSKGHEKCALLILDKIQDESLINAKNNALQTPLHVAA 1137
Score = 52.4 bits (124), Expect = 1e-06
Identities = 30/86 (34%), Positives = 46/86 (53%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N+SD G T AA +G++ + ++ ++G + + D LH+AA GH V+ L
Sbjct: 302 VNVSDRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALL 361
Query: 304 INFGANIFALDNDLQSPLDAAASREQ 381
IN GA + D +PL AAAS Q
Sbjct: 362 INHGAEVTCKDKKGYTPLHAAASNGQ 387
Score = 52.0 bits (123), Expect = 1e-06
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
T H+A + E ++ + D+N D++ TP +AA + + E+I +
Sbjct: 245 TPLHRAVASRSEEAVQVLIKHSADVNARDKNWQTPLHVAAANKAVKCAEVIIPLLSSVNV 304
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
D G T LH+AA NGH V+ L+ GANI A D + L AA + VALL
Sbjct: 305 SDRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINH 364
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIK 495
+ K T L A +K
Sbjct: 365 GAEVTCKDKKGYTPLHAAASNGQINVVK 392
Score = 51.6 bits (122), Expect = 2e-06
Identities = 32/116 (27%), Positives = 56/116 (48%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D + TP +AA+ G+ +E++ G + D TPLH A ++ V
Sbjct: 202 DVNALDSEKRTPLHVAAFLGDAEIIELLILSGARVNAKDNMWLTPLHRAVASRSEEAVQV 261
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
LI A++ A D + Q+PL AA+ + +C ++ ++ N+ + T L A
Sbjct: 262 LIKHSADVNARDKNWQTPLHVAAANKAVKCAEVIIPLLSSVNVSDRGGRTALHHAA 317
Score = 50.1 bits (118), Expect = 5e-06
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 30/145 (20%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK--EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
T H AA+ +E +K +++ D + D+ G TP AA + + +E + + G + +
Sbjct: 594 TCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRTPLHYAAANCHFHCIETLVTTGANVNE 653
Query: 232 CDIWGNTPLHYAASN---------GHAH-------------------CVSFLINFGANIF 327
D WG T LHYAA++ G+AH C+ FL+ AN
Sbjct: 654 TDDWGRTALHYAAASDMDRNKTILGNAHENSEELERARELKEKEAALCLEFLLQNDANPS 713
Query: 328 ALDNDLQSPLDAAASREQNECVALL 402
D + + + AA+ +C+ LL
Sbjct: 714 IRDKEGYNSIHYAAAYGHRQCLELL 738
Score = 49.3 bits (116), Expect = 9e-06
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLL--AAYHGNLGALEIICSRGGDPDR 231
T H AA + ++E++ + N++ D L AAY G+L + ++ + G +
Sbjct: 311 TALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTC 370
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
D G TPLH AASNG + V L+N G I
Sbjct: 371 KDKKGYTPLHAAASNGQINVVKHLLNLGVEI 401
Score = 49.3 bits (116), Expect = 9e-06
Identities = 43/167 (25%), Positives = 61/167 (36%), Gaps = 39/167 (23%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEA-----TRRDLNLSDEDGMTPTLLAAYHGNLGALEII------ 204
T H AA+ + L E + D + D G TP A Y+GN +E++
Sbjct: 925 TPLHYAAARGHATWLSELLQMALSEEDCSFKDNQGYTPLHWACYNGNENCIEVLLEQKCF 984
Query: 205 ------------CSRGGDPDRC----------------DIWGNTPLHYAASNGHAHCVSF 300
C+ D + C D G TPLH AA H C+
Sbjct: 985 RQFIGNPFTPLHCAIINDHENCASLLLGAIDSSIVNCRDDKGRTPLHAAAFADHVECLQL 1044
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPK 441
L+ A + A DN ++ L AA Q V +L +A A + K
Sbjct: 1045 LLRHNAEVNAADNSGKTALMMAAENGQAGAVDILVNSAQADLTVKDK 1091
>ref|XP_535925.2| PREDICTED: similar to TPR domain, ankyrin-repeat and
coiled-coil-containing [Canis familiaris].
Length = 1641
Score = 62.4 bits (150), Expect = 1e-09
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++LSD+ G TP ++AA G+L +E + S+G D G + L +A GH V F
Sbjct: 1336 DVSLSDKQGRTPLMVAACEGHLSTVEFLLSKGAALSSLDKEGLSALSWACLKGHRAVVRF 1395
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVA-LLDKAATAQNI 429
L+ GA I D + ++PLD AA E V L++K A +++
Sbjct: 1396 LVEEGAEIDQTDKNGRTPLDLAAFYGDAETVLYLVEKGAVIEHV 1439
>ref|NP_001191984.1| ankyrin repeat and SOCS box protein 3 [Canis lupus familiaris].
Length = 525
Score = 60.5 bits (145), Expect = 4e-09
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Frame = +1
Query: 67 HQAASDSYLELLKEATRRDLN--LSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDI 240
HQA E++K ++ N D+ G+TP +AA +G L +L I+ S G + + +
Sbjct: 151 HQATFQENAEIIKLLLKKGANKECQDDFGITPLFVAAQYGKLESLSILISSGANVNCQAL 210
Query: 241 WGNTPLHYAASNGHAHCVSFLINFGA--NIFALDNDLQSPLDAAASREQNECVALLDKAA 414
TPL AA GH CV L++ GA +++ +++ Q P+ AAA + + LL
Sbjct: 211 DKATPLFIAAQEGHIECVELLVSSGADPDLYCNEDNWQLPIHAAAQMGHTKILDLLIPLT 270
Query: 415 TAQNIMNPKKVT 450
P KV+
Sbjct: 271 NRVCDTGPDKVS 282
>ref|XP_532805.2| PREDICTED: similar to DDHD domain containing 2 [Canis familiaris].
Length = 1043
Score = 60.5 bits (145), Expect = 4e-09
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +1
Query: 1093 LEVFLQSHHLEEFLPIFMREQIDLEALLLCSDEDLQSIXMQLGPRKKVLNAINRRKQVL 1269
LE L+ L EF +F +E++D EAL LC+D+DLQ + + LGPRKK+LN RK ++
Sbjct: 718 LEEDLKKLQLSEFFSVFEKEKVDKEALALCTDKDLQEMGIPLGPRKKILNHFRTRKNLM 776
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 51,845,425
Number of extensions: 1280858
Number of successful extensions: 5732
Number of sequences better than 1.0e-05: 128
Number of HSP's gapped: 5289
Number of HSP's successfully gapped: 333
Length of query: 473
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 366
Effective length of database: 15,307,552
Effective search space: 5602564032
Effective search space used: 5602564032
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009111
(1419 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003124606.1| PREDICTED: ankyrin repeat and SAM domain-con... 639 0.0
Alignment gi|XP_003131267.1| PREDICTED: Usher syndrome type-1G protein ho... 258 4e-69
Alignment gi|XP_003358024.1| PREDICTED: Usher syndrome type-1G protein ho... 94 2e-19
Alignment gi|NP_001193378.1| serine/threonine-protein phosphatase 6 regul... 75 7e-14
Alignment gi|XP_003133469.2| PREDICTED: protein TANC1 [Sus scrofa]. 66 4e-11
Alignment gi|XP_003360659.1| PREDICTED: transient receptor potential cati... 65 9e-11
Alignment gi|XP_001926150.1| PREDICTED: transient receptor potential cati... 65 9e-11
Alignment gi|XP_003359941.1| PREDICTED: ankyrin repeat domain-containing ... 64 3e-10
Alignment gi|XP_003359648.1| PREDICTED: serine/threonine-protein phosphat... 64 3e-10
Alignment gi|XP_001927751.3| PREDICTED: serine/threonine-protein phosphat... 63 4e-10
>ref|XP_003124606.1| PREDICTED: ankyrin repeat and SAM domain-containing protein 4B [Sus
scrofa].
Length = 417
Score = 639 bits (1648), Expect = 0.0
Identities = 336/417 (80%), Positives = 336/417 (80%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR
Sbjct: 1 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA
Sbjct: 61 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTYXXXXXXXXXXXXXXX 591
ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTY
Sbjct: 121 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTYSKEESGTLSSSKSTF 180
Query: 592 XXXXXXXXXXXXXXXXLSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRNVMEMFKXXXXX 771
LSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRNVMEMFK
Sbjct: 181 SRSSFSNASASNTFGSLSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRNVMEMFKEEEEE 240
Query: 772 XXXXKFSGDFKEKLQFSLKGDSYVQHESILNRPGLGNVVFQSNRILSPEDISGSKREFGF 951
KFSGDFKEKLQFSLKGDSYVQHESILNRPGLGNVVFQSNRILSPEDISGSKREFGF
Sbjct: 241 EEEDKFSGDFKEKLQFSLKGDSYVQHESILNRPGLGNVVFQSNRILSPEDISGSKREFGF 300
Query: 952 KMPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLEEF 1131
KMPS ATPLEVFLQSHHLEEF
Sbjct: 301 KMPSELLQRQEASEAEAEEEEDNQREDDLPWDEDEVEWEEDVVDATPLEVFLQSHHLEEF 360
Query: 1132 LPIFMREQIDLEALLLCSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
LPIFMREQIDLEALLLCSDEDLQSI MQLGPRKKVLNAINRRKQVLQQPGQLVDTSL
Sbjct: 361 LPIFMREQIDLEALLLCSDEDLQSIQMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 417
>ref|XP_003131267.1| PREDICTED: Usher syndrome type-1G protein homolog [Sus scrofa].
Length = 461
Score = 258 bits (660), Expect = 4e-69
Identities = 165/464 (35%), Positives = 224/464 (48%), Gaps = 47/464 (10%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
M+ +YH+AA D YLELLKEATR++LN DEDGMTPTL AAYHGNL +L +I SRGGDPD+
Sbjct: 1 MNDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDK 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLH AASNGH HC+SFL++FGANI+ LDND +PLD A + ECV LD
Sbjct: 61 CDIWGNTPLHLAASNGHLHCLSFLVSFGANIWCLDNDYHTPLDMGAMKGHMECVRYLDSI 120
Query: 412 ATAQNIMNPKKVTRLKEQA-----------QKNARKQIKECERLQEKHQNKMARTYXXXX 558
A Q+ +NPK V +LK++A K RK + ER + + + T
Sbjct: 121 AAKQSSLNPKLVGKLKDKAFREAERRIRECAKMQRKHHERMERRYRRELAERSDTLSFSS 180
Query: 559 XXXXXXXXXXXXXXXXXXXXXXXXXXXLSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRN 738
+ K + K ++ K E K S G+++
Sbjct: 181 LTSSTLSRRLQHLALGSHVPYSQATLHGTAKGKTKIQRKLERRKQGGEGTFKISEDGRKS 240
Query: 739 VMEMFKXXXXXXXXXKFSGDFKEKLQFS--------LKGDSYVQ---------------- 846
V + G + ++ L + V
Sbjct: 241 VRSLSGLQLGSDVMFVRQGTYANPKEWGRAPLRDMFLSDEDSVSRATLAAEPAHSEVSTD 300
Query: 847 --HESILNRPGLGNVVFQSNRI------LSPEDIS----GSKREFGFKMPSXXXXXXXXX 990
H+S+ RPGLG +VF+ N + L ED + G+ R ++ S
Sbjct: 301 SGHDSLFTRPGLGTMVFRRNYLSSGLHGLGREDAALDGGGTPRA---RLQSSPSLDDDSL 357
Query: 991 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLEEFLPIFMREQIDLEA 1170
+PLE FL S H+E+F P+ +E+IDLEA
Sbjct: 358 GSANSLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFTPLLRQEKIDLEA 417
Query: 1171 LLLCSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
L+LCSD DL+SI + LGPRKK++ A+ RR+Q L++P L DT L
Sbjct: 418 LMLCSDLDLRSISVPLGPRKKIMGAVRRRRQTLERPPALEDTEL 461
>ref|XP_003358024.1| PREDICTED: Usher syndrome type-1G protein homolog [Sus scrofa].
Length = 358
Score = 94.0 bits (232), Expect = 2e-19
Identities = 89/359 (24%), Positives = 135/359 (37%), Gaps = 47/359 (13%)
Frame = +1
Query: 367 ASREQNECVALLDKAATAQNIMNPKKVTRLKEQA-----------QKNARKQIKECERLQ 513
A + ECV LD A Q+ +NPK V +LK++A K RK + ER
Sbjct: 3 AMKGHMECVRYLDSIAAKQSSLNPKLVGKLKDKAFREAERRIRECAKMQRKHHERMERRY 62
Query: 514 EKHQNKMARTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKSIKDTFKLKYKKNKD 693
+ + + T + K + K ++ K
Sbjct: 63 RRELAERSDTLSFSSLTSSTLSRRLQHLALGSHVPYSQATLHGTAKGKTKIQRKLERRKQ 122
Query: 694 TAEQVGKESRSGQRNVMEMFKXXXXXXXXXKFSGDFKEKLQFS--------LKGDSYVQ- 846
E K S G+++V + G + ++ L + V
Sbjct: 123 GGEGTFKISEDGRKSVRSLSGLQLGSDVMFVRQGTYANPKEWGRAPLRDMFLSDEDSVSR 182
Query: 847 -----------------HESILNRPGLGNVVFQSNRI------LSPEDIS----GSKREF 945
H+S+ RPGLG +VF+ N + L ED + G+ R
Sbjct: 183 ATLAAEPAHSEVSTDSGHDSLFTRPGLGTMVFRRNYLSSGLHGLGREDAALDGGGTPRA- 241
Query: 946 GFKMPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLE 1125
++ S +PLE FL S H+E
Sbjct: 242 --RLQSSPSLDDDSLGSANSLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHME 299
Query: 1126 EFLPIFMREQIDLEALLLCSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
+F P+ +E+IDLEAL+LCSD DL+SI + LGPRKK++ A+ RR+Q L++P L DT L
Sbjct: 300 DFTPLLRQEKIDLEALMLCSDLDLRSISVPLGPRKKIMGAVRRRRQTLERPPALEDTEL 358
>ref|NP_001193378.1| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Sus scrofa].
Length = 1086
Score = 75.5 bits (184), Expect = 7e-14
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 ASDSYLELLKEATRRDLNLSDEDG---MTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AS++ L++L E + D+ LSD D ++P LAAYHG+ ALE++ D D + G
Sbjct: 558 ASETPLDVLMETSGTDM-LSDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSG 616
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDL-QSPLDAAASREQNECVALLDKAATAQ 423
TPL AA GH CV LIN GA+I D L ++P+ AAA+ +EC+ LL A Q
Sbjct: 617 RTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ 676
Query: 424 NIMN 435
N ++
Sbjct: 677 NAVD 680
Score = 59.7 bits (143), Expect = 4e-09
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK-----EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA++ + E L+ + +++ D +G TP +L+ +G+ + + ++G +
Sbjct: 652 TPIHAAATNGHSECLRLLIGNAEPQNAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGAN 711
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVAL 399
D D WG T LH A GH CV L+ GA D+ ++P+ +AA AL
Sbjct: 712 VDAKDKWGRTALHRGAVTGHEECVDALLQHGAKCLFRDSKGRTPIHLSAACGHIGVLGAL 771
Query: 400 LDKAAT 417
L AA+
Sbjct: 772 LQSAAS 777
Score = 57.4 bits (137), Expect = 2e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++ D+ G T AA GNL L ++ + G D ++ D +G +PLHYAA+N + C+
Sbjct: 430 DIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFA 489
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
L+ GA++ LD +PL AA S +C+ L
Sbjct: 490 LVGSGASVNDLDERGCTPLHYAATSDTDGKCLEYL 524
Score = 54.7 bits (130), Expect = 1e-07
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +1
Query: 43 SRKMSTRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICS 210
+ K T H AA+ ++ LELL + D+N+ +DG TP + A HG + I
Sbjct: 302 NEKGFTPLHFAAASTHGALCLELLV-SNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQ 360
Query: 211 RGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
G D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 361 SGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDC 420
Score = 53.5 bits (127), Expect = 3e-07
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
GM P LAA G + S G D D D +G T LH AA+ G+ C++ L+N GA+
Sbjct: 405 GMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADF 464
Query: 325 FALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRL 456
D +SPL AA+ +C+ L + + N ++ + T L
Sbjct: 465 NKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL 508
Score = 52.4 bits (124), Expect = 6e-07
Identities = 34/127 (26%), Positives = 57/127 (44%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCV 294
+ D+N D + TP AAY G+ +E++ G + D TPLH A ++ V
Sbjct: 64 KEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEEAV 123
Query: 295 SFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQK 474
L+ A++ A D + Q+PL AA+ + +C L + N+ + T L A
Sbjct: 124 QVLLKHSADVNARDKNWQTPLHIAAANKAVKCAEALVPLLSNVNVSDRAGRTALHHAAFS 183
Query: 475 NARKQIK 495
+ +K
Sbjct: 184 GHGEMVK 190
Score = 52.0 bits (123), Expect = 8e-07
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +1
Query: 67 HQAASDSYLELLK--EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDI 240
H AA ++E++K A ++ D+ TP AA G + ++ + G D + +
Sbjct: 211 HWAAYMGHIEVVKLLVAHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNA 270
Query: 241 WGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
+GNTPLH A NG V+ LI+ GAN+ + +PL AAAS C+ LL
Sbjct: 271 YGNTPLHVACYNGQDVVVNELIDCGANVNQKNEKGFTPLHFAAASTHGALCLELL 325
Score = 50.1 bits (118), Expect = 3e-06
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N +D G TP AA+ ++ L+++ S + D G TPL AA NG + V L
Sbjct: 849 VNATDSKGRTPLHAAAFTDHVECLQLLLSHNAHVNSVDSSGKTPLMMAAENGQTNTVEML 908
Query: 304 I-NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMN 435
+ + A++ DN + L A S+ L+ + T +N++N
Sbjct: 909 VSSASADLTLQDNSKNTALHLACSKGHETSALLILEKITDRNLIN 953
Score = 49.3 bits (116), Expect = 5e-06
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
++N+SD G T AA+ G+ ++++ SRG + + D +H+AA GH V
Sbjct: 165 NVNVSDRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKL 224
Query: 301 LINFGANIFALDNDLQSPLDAAAS 372
L+ GA + D +PL AAAS
Sbjct: 225 LVAHGAEVTCKDKKSYTPLHAAAS 248
Score = 48.9 bits (115), Expect = 7e-06
Identities = 30/93 (32%), Positives = 51/93 (54%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
++ D++G TP +AA +G+ + + + G D + I G PLH AA +G + C L
Sbjct: 365 IDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDCCRKL 424
Query: 304 INFGANIFALDNDLQSPLDAAASREQNECVALL 402
++ G +I D+ ++ L AAA+ EC+ LL
Sbjct: 425 LSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLL 457
Score = 48.5 bits (114), Expect = 9e-06
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Frame = +1
Query: 49 KMSTRYHQAASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
K T H+A + E ++ + D+N D++ TP +AA + + E + +
Sbjct: 106 KWLTPLHRAVASCSEEAVQVLLKHSADVNARDKNWQTPLHIAAANKAVKCAEALVPLLSN 165
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALL 402
+ D G T LH+AA +GH V L++ GANI A D + + AA E V LL
Sbjct: 166 VNVSDRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKLL 225
Query: 403 DKAATAQNIMNPKKVTRLKEQAQKNARKQIK 495
+ K T L A +K
Sbjct: 226 VAHGAEVTCKDKKSYTPLHAAASSGMISVVK 256
>ref|XP_003133469.2| PREDICTED: protein TANC1 [Sus scrofa].
Length = 1860
Score = 66.2 bits (160), Expect = 4e-11
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+NL D+ G TP ++AA G+L +E + S+G D G + L +A GH V F
Sbjct: 1140 DVNLGDKQGRTPLMVAACEGHLSTVEFLLSKGATLSSLDKEGLSALSWACLKGHRAVVQF 1199
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVA-LLDKAATAQNI 429
L+ GA I D + +SPLD AA E V L+DK A +++
Sbjct: 1200 LVEEGAEIDQTDKNGRSPLDLAAFYGDAETVLYLVDKGAVIEHV 1243
>ref|XP_003360659.1| PREDICTED: transient receptor potential cation channel subfamily A
member 1-like [Sus scrofa].
Length = 1164
Score = 65.1 bits (157), Expect = 9e-11
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Frame = +1
Query: 70 QAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGN 249
Q ++ +++L E + D+NL E+G T ++A + N A+E++ ++G P + + WG
Sbjct: 185 QRLNNEVMKVLIEHSGTDINLEGENGNTALIIACFTDNSEAVELLLNKGAKPCKSNKWGC 244
Query: 250 TPLHYAASNGHAHCVSFLINFG--------ANIFALDNDLQSPLDAAASREQNECVALLD 405
P+H AA +G C+ ++ FG A+I ++N SPL A E + +
Sbjct: 245 FPIHQAAFSGAKKCMEIILKFGEENGYSRVAHINFVNNRKVSPLHMAVQSGDLEMIKMCL 304
Query: 406 KAATAQNIMNPKKVTRLKEQAQKNARKQIK 495
++M K T L A + A + +K
Sbjct: 305 DNGAQLDLMEKGKCTALHFAATQGATEIVK 334
Score = 53.5 bits (127), Expect = 3e-07
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDP--DRCDIWGNTPLHYAASNGHAH 288
R+ L D+ +P AA G +G +E+I S + D +GNTPLH+AA
Sbjct: 98 RKRLKKYDDVNASPLHHAAEEGQVGLMEMIVSDSSXXVLNAMDDYGNTPLHWAAEKNQVE 157
Query: 289 CVSFLINFGANIFALDNDLQSPLDAAASREQNECVALL 402
+ FL+ GAN + ++ +PL A R NE + +L
Sbjct: 158 SIKFLLRKGANPNLRNCNMMAPLHVAVQRLNNEVMKVL 195
Score = 48.9 bits (115), Expect = 7e-06
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEATRRD-LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD-PDR 231
T H AA + + ++++ ++ L LSD +G T A+ G +++I DR
Sbjct: 529 TPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASLGGYTQTMKVILDTNMKCTDR 588
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECV 393
D GNT LH+AA GHA V+ L+++ ANI L+ S L A ++ E V
Sbjct: 589 LDDEGNTALHFAAREGHAKAVALLLSYDANII-LNKQRASFLHVAIHNKRKEVV 641
>ref|XP_001926150.1| PREDICTED: transient receptor potential cation channel subfamily A
member 1 [Sus scrofa].
Length = 1120
Score = 65.1 bits (157), Expect = 9e-11
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Frame = +1
Query: 70 QAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGN 249
Q ++ +++L E + D+NL E+G T ++A + N A+E++ ++G P + + WG
Sbjct: 141 QRLNNEVMKVLIEHSGTDINLEGENGNTALIIACFTDNSEAVELLLNKGAKPCKSNKWGC 200
Query: 250 TPLHYAASNGHAHCVSFLINFG--------ANIFALDNDLQSPLDAAASREQNECVALLD 405
P+H AA +G C+ ++ FG A+I ++N SPL A E + +
Sbjct: 201 FPIHQAAFSGAKKCMEIILKFGEENGYSRVAHINFVNNRKVSPLHMAVQSGDLEMIKMCL 260
Query: 406 KAATAQNIMNPKKVTRLKEQAQKNARKQIK 495
++M K T L A + A + +K
Sbjct: 261 DNGAQLDLMEKGKCTALHFAATQGATEIVK 290
Score = 52.8 bits (125), Expect = 5e-07
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDP--DRCDIWGNTPLHYAASNGHAH 288
R+ L D+ +P AA G +G +E+I S + D +GNTPLH+AA
Sbjct: 54 RKRLKKYDDVNASPLHHAAEEGQVGLMEMIVSDSSCEVLNAMDDYGNTPLHWAAEKNQVE 113
Query: 289 CVSFLINFGANIFALDNDLQSPLDAAASREQNECVALL 402
+ FL+ GAN + ++ +PL A R NE + +L
Sbjct: 114 SIKFLLRKGANPNLRNCNMMAPLHVAVQRLNNEVMKVL 151
Score = 48.9 bits (115), Expect = 7e-06
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEATRRD-LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD-PDR 231
T H AA + + ++++ ++ L LSD +G T A+ G +++I DR
Sbjct: 485 TPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASLGGYTQTMKVILDTNMKCTDR 544
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECV 393
D GNT LH+AA GHA V+ L+++ ANI L+ S L A ++ E V
Sbjct: 545 LDDEGNTALHFAAREGHAKAVALLLSYDANII-LNKQRASFLHVAIHNKRKEVV 597
>ref|XP_003359941.1| PREDICTED: ankyrin repeat domain-containing protein 26-like [Sus
scrofa].
Length = 355
Score = 63.5 bits (153), Expect = 3e-10
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Frame = +1
Query: 46 RKMSTRYHQAASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGG 219
RK T H A + + ++ R LNL D + T + A I+ G
Sbjct: 74 RKNRTALHLACAKGHPAVVSLLVERKCQLNLCDSENRTALMKATQCREEECANILLEHGA 133
Query: 220 DPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVAL 399
DPD DI GNT LHYAA + ++ + L++ ANI A + D +PL A + Q + V
Sbjct: 134 DPDVVDISGNTALHYAALDQNSSMAAKLLSHNANIEAKNKDGLTPLLLAVTENQQQMVEF 193
Query: 400 LDKAATAQNIMNPKKVTRL 456
L K ++ + KK T L
Sbjct: 194 LIKNGANVHVTDKKKRTAL 212
>ref|XP_003359648.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory
ankyrin repeat subunit B-like [Sus scrofa].
Length = 1040
Score = 63.5 bits (153), Expect = 3e-10
Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Frame = +1
Query: 67 HQAASDSY---LELLKEATRRDLNLSDEDGM-TPTLLAAYHGNLGALEIICSRGGDPDRC 234
H AA+ + LELL E T SD +P LAAY+G+ ALE++ D D
Sbjct: 587 HYAAAYGHRQCLELLLERTNSVFEESDSGATKSPLHLAAYNGHHQALEVLLQSLVDLDIR 646
Query: 235 DIWGNTPLHYAASNGHAHCVSFLINFGANIFALDN-DLQSPLDAAASREQNECVALLDKA 411
D G T L AA GH CV LIN GA+IF DN ++PL A+ C+ LL +
Sbjct: 647 DEKGRTALDLAAFKGHTECVEALINQGASIFVKDNVTKRTPLHASVINGHTLCLRLLLEI 706
Query: 412 ATAQNIMNPK 441
A +++ K
Sbjct: 707 ADNPEVVDVK 716
Score = 63.2 bits (152), Expect = 4e-10
Identities = 43/136 (31%), Positives = 71/136 (52%)
Frame = +1
Query: 73 AASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNT 252
A SD +LL +++ D+ G T AA GN+ ++++ S G D + D G T
Sbjct: 433 AHSDCCRKLLSSGF--EIDTPDKFGRTCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRT 490
Query: 253 PLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIM 432
PLHYAA+N H HC+ L+ GA++ D+ ++ L AA+ + + +LL A
Sbjct: 491 PLHYAAANCHFHCIETLVTTGASVNETDDWGRTALHYAAASDMDRNKSLLGNAHE----- 545
Query: 433 NPKKVTRLKEQAQKNA 480
N +++ R +E +K A
Sbjct: 546 NSEELERARELKEKEA 561
Score = 59.7 bits (143), Expect = 4e-09
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +1
Query: 58 TRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDP 225
T H AA+ ++ LELL D+N+ +DG +P + A HG + + GG+
Sbjct: 324 TPLHFAAASTHGALCLELLVN-NGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEI 382
Query: 226 DRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 383 DCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDC 437
Score = 56.6 bits (135), Expect = 3e-08
Identities = 32/97 (32%), Positives = 51/97 (52%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
+++ D+DG TP +AA +G+ + + + G D +C I PLH AA N H+ C
Sbjct: 381 EIDCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDCCRK 440
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
L++ G I D ++ L AAA+ EC+ LL +
Sbjct: 441 LLSSGFEIDTPDKFGRTCLHAAAAGGNVECIKLLQSS 477
Score = 55.5 bits (132), Expect = 7e-08
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+++ D G TP +LA +G++ A+ ++ + + D DI G T LH GH CV L
Sbjct: 713 VDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANVDAVDIMGCTALHRGIMTGHEECVQML 772
Query: 304 INFGANIFALDNDLQSPLDAAASR 375
+ +I D+ ++PL AA+R
Sbjct: 773 LEQEVSILCKDSRGRTPLHYAAAR 796
Score = 53.9 bits (128), Expect = 2e-07
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
++ D+ G TP AA +G + ++ + + G + D +++GNT LH A NG V+
Sbjct: 248 EVTCKDKKGYTPLHAAASNGQITVVKHLLNLGVEIDEINVYGNTALHLACYNGQDAVVNE 307
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALLDKAATAQNIMN 435
L ++GAN+ +N +PL AAAS C+ LL NI +
Sbjct: 308 LTDYGANVNQPNNSGFTPLHFAAASTHGALCLELLVNNGADVNIQS 353
Score = 52.4 bits (124), Expect = 6e-07
Identities = 30/86 (34%), Positives = 46/86 (53%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N+SD G T AA +G++ + ++ ++G + + D LH+AA GH V+ L
Sbjct: 183 VNVSDRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALL 242
Query: 304 INFGANIFALDNDLQSPLDAAASREQ 381
IN GA + D +PL AAAS Q
Sbjct: 243 INHGAEVTCKDKKGYTPLHAAASNGQ 268
Score = 51.2 bits (121), Expect = 1e-06
Identities = 39/125 (31%), Positives = 54/125 (43%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D++ TP +AA + + E+I + D G T LH+AA NGH V+
Sbjct: 149 DVNARDKNWQTPLHVAAANKAVKCAEVIIPLLSSVNVSDRGGRTALHHAALNGHVEMVNL 208
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQKNA 480
L+ GANI A D + L AA + VALL + K T L A
Sbjct: 209 LLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTCKDKKGYTPLHAAASNGQ 268
Query: 481 RKQIK 495
+K
Sbjct: 269 ITVVK 273
Score = 49.7 bits (117), Expect = 4e-06
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 30/145 (20%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK--EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
T H AA+ +E +K +++ D + D+ G TP AA + + +E + + G +
Sbjct: 457 TCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRTPLHYAAANCHFHCIETLVTTGASVNE 516
Query: 232 CDIWGNTPLHYAASN---------GHAH-------------------CVSFLINFGANIF 327
D WG T LHYAA++ G+AH C+ FL+ AN
Sbjct: 517 TDDWGRTALHYAAASDMDRNKSLLGNAHENSEELERARELKEKEAALCLEFLLQNDANPS 576
Query: 328 ALDNDLQSPLDAAASREQNECVALL 402
D + + + AA+ +C+ LL
Sbjct: 577 IRDKEGYNSIHYAAAYGHRQCLELL 601
>ref|XP_001927751.3| PREDICTED: serine/threonine-protein phosphatase 6 regulatory
ankyrin repeat subunit C [Sus scrofa].
Length = 623
Score = 63.2 bits (152), Expect = 4e-10
Identities = 47/114 (41%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 79 SDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPL 258
SD +LL A D+N D G T AA GN+ L ++ S G D R D +G TPL
Sbjct: 311 SDCCRKLLSSAGF-DINTPDNLGRTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPL 369
Query: 259 HYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVA-LLDKAA 414
HYAA+NG C L+ GA + D SPL AAAS C+ LLD A
Sbjct: 370 HYAAANGSYQCAVTLVTAGAGVNEADCKGCSPLHYAAASDTYRSCLEFLLDNGA 423
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N ++G +P +AA HG +I+ G + D D +GNTPLH AA GH +S
Sbjct: 224 DVNYQSKEGKSPLHMAAIHGRFTRSQILIQNGSEIDCADKFGNTPLHVAARYGHELLIST 283
Query: 301 LINFGAN 321
L+ GA+
Sbjct: 284 LMTNGAD 290
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,347,161
Number of extensions: 840935
Number of successful extensions: 3124
Number of sequences better than 1.0e-05: 67
Number of HSP's gapped: 2945
Number of HSP's successfully gapped: 126
Length of query: 473
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 370
Effective length of database: 8,779,541
Effective search space: 3248430170
Effective search space used: 3248430170
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009111
(1419 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_082361.2| ankyrin repeat and SAM domain-containing protei... 534 e-152
Alignment gi|NP_789817.1| Usher syndrome type-1G protein homolog [Mus mus... 271 1e-72
Alignment gi|NP_001019775.1| serine/threonine-protein phosphatase 6 regul... 75 1e-13
Alignment gi|NP_001074902.2| serine/threonine-protein phosphatase 6 regul... 66 8e-11
Alignment gi|NP_938036.2| protein TANC1 [Mus musculus]. 62 8e-10
Alignment gi|NP_082378.1| phospholipase DDHD2 [Mus musculus]. 61 2e-09
Alignment gi|XP_001477253.1| PREDICTED: ankyrin repeat domain-containing ... 60 3e-09
Alignment gi|XP_001472967.1| PREDICTED: ankyrin repeat domain-containing ... 60 3e-09
Alignment gi|NP_766378.1| serine/threonine-protein phosphatase 6 regulato... 60 4e-09
Alignment gi|NP_001104253.1| ankyrin-1 isoform 1 [Mus musculus]. 60 4e-09
>ref|NP_082361.2| ankyrin repeat and SAM domain-containing protein 4B [Mus musculus].
Length = 423
Score = 534 bits (1376), Expect = e-152
Identities = 288/428 (67%), Positives = 310/428 (72%), Gaps = 11/428 (2%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
MSTRYHQAASDSYLELLKEAT+RDLNLSDEDGMTPTLLAAYHGNL ALEIICSRGGDPD+
Sbjct: 1 MSTRYHQAASDSYLELLKEATKRDLNLSDEDGMTPTLLAAYHGNLEALEIICSRGGDPDK 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLHYAASNGH HC+SFL+NFGANIFALDNDL+SPLDAAASREQ ECVALLDKA
Sbjct: 61 CDIWGNTPLHYAASNGHTHCISFLVNFGANIFALDNDLKSPLDAAASREQKECVALLDKA 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTYXXXXXXXXXXXXXXX 591
AT QN MNPK+VTRLKEQA KNARKQ+KECERLQE+HQNKMARTY
Sbjct: 121 ATVQNTMNPKRVTRLKEQALKNARKQMKECERLQERHQNKMARTY-SKEDSGTISSSHST 179
Query: 592 XXXXXXXXXXXXXXXXLSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRNVMEMFKXXXXX 771
LSK IKDTFK+K KKNKDT EQ+ K+ RSGQR VME+F+
Sbjct: 180 LSRSFLSTTSAGRFGSLSKGIKDTFKIKSKKNKDTTEQLEKDGRSGQRPVMEVFR----E 235
Query: 772 XXXXKFSGDFKEKLQFSLKGDSYVQHESILNRPGLGNVVFQSNRILSPEDISGSKREFGF 951
F DFKEKL FS++ D VQHESILNRPGLG++VF NR+L EDIS SKRE GF
Sbjct: 236 EEEDSFPKDFKEKLHFSVEEDDDVQHESILNRPGLGSIVFSRNRVLDFEDISDSKRELGF 295
Query: 952 KMPS-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLE 1098
KMPS ATPLE
Sbjct: 296 KMPSELFQRQGAAGTVEEEEEEEEEEEEEKREANGTAGDLPWDEEEVEWEEDAVDATPLE 355
Query: 1099 VFLQSHHLEEFLPIFMREQIDLEALLLCSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQP 1278
VFLQS HLEEFLPIFMREQIDLEALLLCSDEDLQ+I MQLGPRKKVL+AI++RKQVLQQP
Sbjct: 356 VFLQSQHLEEFLPIFMREQIDLEALLLCSDEDLQNIHMQLGPRKKVLSAIDKRKQVLQQP 415
Query: 1279 GQLVDTSL 1302
GQLVDTSL
Sbjct: 416 GQLVDTSL 423
>ref|NP_789817.1| Usher syndrome type-1G protein homolog [Mus musculus].
Length = 461
Score = 271 bits (692), Expect = 1e-72
Identities = 170/463 (36%), Positives = 234/463 (50%), Gaps = 46/463 (9%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
M+ +YH+AA D YLELLKEATR++LN DEDGMTPTL AAYHGNL +L +I SRGGDPD+
Sbjct: 1 MNDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDK 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLH AASNGH HC+SFL++FGANI+ LDND +PLD AA + ECV LD
Sbjct: 61 CDIWGNTPLHLAASNGHLHCLSFLVSFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSI 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKEC--------ERLQEKHQNKMA-RTYXXXXXX 564
A Q+ +NPK V +LK++A + A ++I+EC ER++ +++ ++A R+
Sbjct: 121 AAKQSSLNPKLVGKLKDKAFREAERRIRECAKMQRKHHERMERRYRRELAERSDTLSFSS 180
Query: 565 XXXXXXXXXXXXXXXXXXXXXXXXXLSKSIKDTFKL--KYKKNKDTAEQVGKESRSGQRN 738
L + K K+ K ++ K E K S G+++
Sbjct: 181 LTSSTLSRRLQHMTLGSQLPYSQATLHGTAKGKAKIQKKLERRKQGGEGTFKVSEDGRKS 240
Query: 739 VMEMFKXXXXXXXXXKFSGDFKEKLQFS--------LKGDSYVQ---------------- 846
V + G + ++ L + V
Sbjct: 241 VRSLSGLQLGSDVMFVRQGTYANPKEWGRAPLRDMFLSDEDSVSRATLAAEPAHSEVSTD 300
Query: 847 --HESILNRPGLGNVVFQSNRILSPEDISGSKREFGF---------KMPSXXXXXXXXXX 993
H+S+ RPGLG +VF+ N + S + G RE G ++ S
Sbjct: 301 SGHDSLFTRPGLGTMVFRRNYVSS--GLHGLGREDGGLDGAGTPRGRLHSSPSLDDDSLG 358
Query: 994 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLEEFLPIFMREQIDLEAL 1173
+PLE FL S H+E+F + E+IDLEAL
Sbjct: 359 SANSLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFASLLRHEKIDLEAL 418
Query: 1174 LLCSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
+LCSD DL+SI + LGPRKK+L A+ RR+Q L++P L DT L
Sbjct: 419 MLCSDLDLRSISVPLGPRKKILGAVRRRRQALERPLALEDTEL 461
>ref|NP_001019775.1| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Mus musculus].
Length = 1053
Score = 75.5 bits (184), Expect = 1e-13
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 ASDSYLELLKEATRRDLNLSDEDG---MTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AS++ L++L E + D+ LSD D ++P LAAYHG+ ALE++ D D + G
Sbjct: 525 ASETPLDVLMETSGTDM-LSDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSG 583
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDL-QSPLDAAASREQNECVALLDKAATAQ 423
TPL AA GH CV LIN GA+I D L ++P+ AAA+ +EC+ LL A Q
Sbjct: 584 RTPLDLAAFKGHVECVDVLINQGASILVKDYVLKRTPIHAAATNGHSECLRLLIGNAEPQ 643
Query: 424 NIMN 435
N ++
Sbjct: 644 NAVD 647
Score = 59.7 bits (143), Expect = 5e-09
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK-----EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA++ + E L+ + +++ D +G TP +L+ +G+ + + ++G +
Sbjct: 619 TPIHAAATNGHSECLRLLIGNAEPQNAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGAN 678
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALL 402
D D WG T LH A GH CV L+ GA D+ ++P+ +A+ + L
Sbjct: 679 VDAKDKWGRTALHRGAVTGHEECVDALLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGAL 738
Query: 403 DKAATA 420
++AT+
Sbjct: 739 LQSATS 744
Score = 57.4 bits (137), Expect = 3e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++ D+ G T AA GNL L ++ + G D ++ D +G +PLHYAA+N + C+
Sbjct: 397 DIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFA 456
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
L+ GA++ LD +PL AA S +C+ L
Sbjct: 457 LVGSGASVNDLDERGCTPLHYAATSDTDGKCLEYL 491
Score = 54.3 bits (129), Expect = 2e-07
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 43 SRKMSTRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICS 210
+ K T H AA+ ++ LELL D+N+ +DG TP + A HG + I
Sbjct: 269 NEKGFTPLHFAAASTHGALCLELLV-GNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQ 327
Query: 211 RGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
G D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 328 SGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDC 387
Score = 53.5 bits (127), Expect = 4e-07
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
GM P LAA G + S G D D D +G T LH AA+ G+ C++ L+N GA+
Sbjct: 372 GMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADF 431
Query: 325 FALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRL 456
D +SPL AA+ +C+ L + + N ++ + T L
Sbjct: 432 NKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL 475
Score = 52.4 bits (124), Expect = 9e-07
Identities = 34/127 (26%), Positives = 57/127 (44%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCV 294
+ D+N D + TP AAY G+ +E++ G + D TPLH A ++ V
Sbjct: 31 KEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEEAV 90
Query: 295 SFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQK 474
L+ A++ A D + Q+PL AA+ + +C L + N+ + T L A
Sbjct: 91 QILLKHSADVNARDKNWQTPLHIAAANKAVKCAESLVPLLSNVNVSDRAGRTALHHAAFS 150
Query: 475 NARKQIK 495
+ +K
Sbjct: 151 GHGEMVK 157
Score = 51.2 bits (121), Expect = 2e-06
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = +1
Query: 67 HQAASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDI 240
H AA ++E++K ++ D+ TP AA G + ++ + G D + +
Sbjct: 178 HWAAYMGHIEVVKLLVSHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNA 237
Query: 241 WGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
+GNTPLH A NG V+ LI+ GAN+ + +PL AAAS C+ LL
Sbjct: 238 YGNTPLHVACYNGQDVVVNELIDCGANVNQKNEKGFTPLHFAAASTHGALCLELL 292
Score = 50.4 bits (119), Expect = 3e-06
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
++N+SD G T AA+ G+ ++++ SRG + + D +H+AA GH V
Sbjct: 132 NVNVSDRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKL 191
Query: 301 LINFGANIFALDNDLQSPLDAAAS 372
L++ GA + D +PL AAAS
Sbjct: 192 LVSHGAEVTCKDKKSYTPLHAAAS 215
Score = 48.9 bits (115), Expect = 1e-05
Identities = 30/93 (32%), Positives = 51/93 (54%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
++ D++G TP +AA +G+ + + + G D + I G PLH AA +G + C L
Sbjct: 332 IDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDCCRKL 391
Query: 304 INFGANIFALDNDLQSPLDAAASREQNECVALL 402
++ G +I D+ ++ L AAA+ EC+ LL
Sbjct: 392 LSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLL 424
>ref|NP_001074902.2| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit B [Mus musculus].
Length = 993
Score = 65.9 bits (159), Expect = 8e-11
Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Frame = +1
Query: 67 HQAASDSY---LELLKEATRRDLNLSDEDGM-TPTLLAAYHGNLGALEIICSRGGDPDRC 234
H AA+ + LELL E T SD + +P LAAY+G+ ALE++ D D
Sbjct: 537 HYAAAYGHRQCLELLLERTNTGFEESDGGALKSPLHLAAYNGHHQALEVLLQSLVDLDIR 596
Query: 235 DIWGNTPLHYAASNGHAHCVSFLINFGANIFALDN-DLQSPLDAAASREQNECVALLDKA 411
D G T L+ AA GH CV L+N GA+IF DN ++PL A+ C+ LL +
Sbjct: 597 DEKGRTALYLAAFKGHTECVEALVNQGASIFVKDNVTKRTPLHASVINGHTLCLRLLLET 656
Query: 412 ATAQNIMNPK 441
A +++ K
Sbjct: 657 ADNPEVVDVK 666
Score = 63.2 bits (152), Expect = 5e-10
Identities = 43/136 (31%), Positives = 70/136 (51%)
Frame = +1
Query: 73 AASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNT 252
A SD +LL +++ D G T AA GN+ ++++ S G D + D G T
Sbjct: 383 AHSDCCRKLLSSGF--EIDTPDTFGRTCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRT 440
Query: 253 PLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIM 432
PLHYAA+N H HC+ L+ GAN+ D+ ++ L AA+ + + +L A
Sbjct: 441 PLHYAAANCHFHCIKALVTTGANVNETDDWGRTALHYAAASDMDRNKMILGNAHD----- 495
Query: 433 NPKKVTRLKEQAQKNA 480
N +++ R +E +K+A
Sbjct: 496 NSEELERAREVKEKDA 511
Score = 60.8 bits (146), Expect = 2e-09
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = +1
Query: 58 TRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDP 225
T H AA+ ++ LELL D+N+ +DG +P + A HG + + GG+
Sbjct: 274 TPLHFAAASTHGALCLELLVN-NGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEI 332
Query: 226 DRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
D D GNTPLH AA +GH ++ LI GA+ PL AA ++C
Sbjct: 333 DCVDKDGNTPLHVAARHGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDC 387
Score = 58.9 bits (141), Expect = 9e-09
Identities = 33/97 (34%), Positives = 51/97 (52%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
+++ D+DG TP +AA HG+ + + + G D +C I PLH AA N H+ C
Sbjct: 331 EIDCVDKDGNTPLHVAARHGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDCCRK 390
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
L++ G I D ++ L AAA+ EC+ LL +
Sbjct: 391 LLSSGFEIDTPDTFGRTCLHAAAAGGNVECIKLLQSS 427
Score = 56.6 bits (135), Expect = 5e-08
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
++ D+ G TP AA +G + ++ + + G + D +++GNT LH A NG V+
Sbjct: 198 EVTCKDKKGYTPLHAAASNGQISVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNE 257
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALLDKAATAQNIMN 435
LI++GAN+ +N +PL AAAS C+ LL NI +
Sbjct: 258 LIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLVNNGADVNIQS 303
Score = 56.2 bits (134), Expect = 6e-08
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+++ D G TP +LA +G++ A+ ++ + + D DI G T LH GH CV L
Sbjct: 663 VDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANVDAVDIVGCTALHRGIMTGHEECVQML 722
Query: 304 INFGANIFALDNDLQSPLDAAASR 375
+ A+I D+ ++PL AA+R
Sbjct: 723 LEQEASILCKDSRGRTPLHYAAAR 746
Score = 52.8 bits (125), Expect = 7e-07
Identities = 30/86 (34%), Positives = 46/86 (53%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N+SD G T AA +G++ + ++ ++G + + D LH+AA GH V+ L
Sbjct: 133 VNVSDRGGRTALHHAALNGHMEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALL 192
Query: 304 INFGANIFALDNDLQSPLDAAASREQ 381
IN GA + D +PL AAAS Q
Sbjct: 193 INHGAEVTCKDKKGYTPLHAAASNGQ 218
Score = 51.6 bits (122), Expect = 1e-06
Identities = 32/116 (27%), Positives = 56/116 (48%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D + TP +AA+ G+ +E++ G + D TPLH A ++ V
Sbjct: 33 DVNALDSEKRTPLHVAAFLGDAEIIELLILSGARVNAKDNMWLTPLHRAVASRSEEAVQV 92
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
LI A++ A D + Q+PL AA+ + +C ++ ++ N+ + T L A
Sbjct: 93 LIKHSADVNARDKNWQTPLHVAAANKAVKCAEVIIPLLSSVNVSDRGGRTALHHAA 148
Score = 51.6 bits (122), Expect = 1e-06
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
T H+A + E ++ + D+N D++ TP +AA + + E+I +
Sbjct: 76 TPLHRAVASRSEEAVQVLIKHSADVNARDKNWQTPLHVAAANKAVKCAEVIIPLLSSVNV 135
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
D G T LH+AA NGH V+ L+ GANI A D + L AA + VALL
Sbjct: 136 SDRGGRTALHHAALNGHMEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINH 195
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIK 495
+ K T L A +K
Sbjct: 196 GAEVTCKDKKGYTPLHAAASNGQISVVK 223
Score = 50.1 bits (118), Expect = 4e-06
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEA-----TRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA+ + L E + D L D G TP A Y+GN +E++ +
Sbjct: 738 TPLHYAAARGHATWLNELLQIALSEEDCCLKDNQGYTPLHWACYNGNENCIEVLLEQ--- 794
Query: 223 PDRC--DIWGN--TPLHYAASNGHAHCVSFLINF--GANIFALDNDLQSPLDAAASREQN 384
+C GN TPLH A NGH C S L+ + + D+ ++ L AAA +
Sbjct: 795 --KCFRKFIGNPFTPLHCAIINGHESCASLLLGAIDPSIVSCRDDKGRTTLHAAAFGDHA 852
Query: 385 ECVALLDKAATAQNIMNPKKVTRLKEQAQ 471
EC+ LL + N ++ T L A+
Sbjct: 853 ECLQLLLRHDAQVNAVDNSGKTALMMAAE 881
Score = 49.3 bits (116), Expect = 7e-06
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLL--AAYHGNLGALEIICSRGGDPDR 231
T H AA + ++E++ + N++ D L AAY G+L + ++ + G +
Sbjct: 142 TALHHAALNGHMEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTC 201
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECV-ALLDK 408
D G TPLH AASNG V L+N G I ++ + L A Q+ V L+D
Sbjct: 202 KDKKGYTPLHAAASNGQISVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNELIDY 261
Query: 409 AATAQNIMN 435
A N
Sbjct: 262 GANVNQPNN 270
>ref|NP_938036.2| protein TANC1 [Mus musculus].
Length = 1856
Score = 62.4 bits (150), Expect = 8e-10
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+NLSD+ G TP ++A+ G+L +E + S+G D G + L +A GH V +
Sbjct: 1134 DVNLSDKQGRTPLMVASCEGHLSTVEFLLSKGAALSSLDKEGLSALSWACLKGHRAVVQY 1193
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVA-LLDKAATAQNI 429
L+ GA I D + ++PLD AA E V L++K A +++
Sbjct: 1194 LVEEGAEIDQTDKNGRTPLDLAAFYGDAETVLYLVEKGAVIEHV 1237
>ref|NP_082378.1| phospholipase DDHD2 [Mus musculus].
Length = 699
Score = 61.2 bits (147), Expect = 2e-09
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +1
Query: 1084 ATPLEVFLQSHHLEEFLPIFMREQIDLEALLLCSDEDLQSIXMQLGPRKKVLNAINRRK 1260
A+ LE L+ L EF+ +F +E++D EAL LC+D DLQ + + LGPRKK+LN + RK
Sbjct: 387 ASTLEEDLKKLQLSEFVTVFEKEKVDREALALCTDRDLQEMGIPLGPRKKILNHFSARK 445
>ref|XP_001477253.1| PREDICTED: ankyrin repeat domain-containing protein 26 [Mus
musculus].
Length = 336
Score = 60.5 bits (145), Expect = 3e-09
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Frame = +1
Query: 46 RKMSTRYHQAASDSYLELLKEATRRDLNLS--DEDGMTPTLLAAYHGNLGALEIICSRGG 219
+K T H A + +L ++ R+ N++ D+D TP + A+ H + + + G
Sbjct: 79 KKNRTALHYACAHGHLGVVTLLIERNCNINACDDDNCTPLIKASQHQHGDCVAALLQHGA 138
Query: 220 DPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVA- 396
DP+ D GNT LHYA + + S L+ ANI A + +PL + A R+ + +
Sbjct: 139 DPNAVDALGNTALHYAVHSENTFIASQLLEHSANIEAKTKEGFTPL-SLALRQNKDLIGE 197
Query: 397 -LLDKAATAQNIMNPKK 444
L+ K A + +P +
Sbjct: 198 LLMQKGANIHTVFHPDR 214
>ref|XP_001472967.1| PREDICTED: ankyrin repeat domain-containing protein 26 [Mus
musculus].
Length = 336
Score = 60.5 bits (145), Expect = 3e-09
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Frame = +1
Query: 46 RKMSTRYHQAASDSYLELLKEATRRDLNLS--DEDGMTPTLLAAYHGNLGALEIICSRGG 219
+K T H A + +L ++ R+ N++ D+D TP + A+ H + + + G
Sbjct: 79 KKNRTALHYACAHGHLGVVTLLIERNCNINACDDDNCTPLIKASQHQHGDCVAALLQHGA 138
Query: 220 DPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVA- 396
DP+ D GNT LHYA + + S L+ ANI A + +PL + A R+ + +
Sbjct: 139 DPNAVDALGNTALHYAVHSENTFIASQLLEHSANIEAKTKEGFTPL-SLALRQNKDLIGE 197
Query: 397 -LLDKAATAQNIMNPKK 444
L+ K A + +P +
Sbjct: 198 LLMQKGANIHTVFHPDR 214
>ref|NP_766378.1| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit C [Mus musculus].
Length = 1076
Score = 60.1 bits (144), Expect = 4e-09
Identities = 35/86 (40%), Positives = 45/86 (52%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D G T AA GN+ L ++ S G D R D +G TPLHYAA+NG C
Sbjct: 415 DINTPDSLGRTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPLHYAAANGSYQCAVT 474
Query: 301 LINFGANIFALDNDLQSPLDAAASRE 378
L+ GA + D SPL AA+ +
Sbjct: 475 LVTAGAGVNEADCKGCSPLHYAAASD 500
Score = 53.9 bits (128), Expect = 3e-07
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N ++G +P +AA HG +I+ G + D D +GNTPLH AA GH +S
Sbjct: 298 DVNYQSKEGKSPLHMAAIHGRFTRSQILIQNGSEIDCADKFGNTPLHVAARYGHELLIST 357
Query: 301 LINFGAN 321
L+ GA+
Sbjct: 358 LMTNGAD 364
Score = 53.5 bits (127), Expect = 4e-07
Identities = 29/105 (27%), Positives = 55/105 (52%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCV 294
+ ++N+ D++ TP AAY G++ L+++ G + + D TPLH AA++ + +
Sbjct: 31 KENINVLDQERRTPLHAAAYVGDVPILQLLLMSGANVNAKDTLWLTPLHRAAASRNEKVL 90
Query: 295 SFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNI 429
L+ A++ A D Q+PL AA+ +C L ++ N+
Sbjct: 91 GLLLAHSADVNARDKLWQTPLHVAAANRATKCAEALAPLLSSLNV 135
>ref|NP_001104253.1| ankyrin-1 isoform 1 [Mus musculus].
Length = 1907
Score = 60.1 bits (144), Expect = 4e-09
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Frame = +1
Query: 40 VSRKMSTRYHQAASDSYLELLKEATRRDL--NLSDEDGMTPTLLAAYHGNLGALEIICSR 213
+++K T H AA + L + D N + ++G+TP +A +H NL ++++ R
Sbjct: 565 MTKKGFTPLHVAAKYGKVRLAELLLEHDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR 624
Query: 214 GGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECV 393
GG P G TPLH AA L+ +G + A +PL AA E V
Sbjct: 625 GGSPHSPAWNGYTPLHIAAKQNQIEVARSLLQYGGSANAESVQGVTPLHLAAQEGHTEMV 684
Query: 394 ALLDKAATAQNIMNPKKVTRLKEQAQK 474
ALL N+ N +T L +Q+
Sbjct: 685 ALLLSKQANGNLGNKSGLTPLHLVSQE 711
Score = 56.6 bits (135), Expect = 5e-08
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +1
Query: 58 TRYHQAASDSYLEL--LKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
T H AA + + E+ L + + + NL ++ G+TP L + G++ +++ G D
Sbjct: 670 TPLHLAAQEGHTEMVALLLSKQANGNLGNKSGLTPLHLVSQEGHVPVADVLIKHGVTVDA 729
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
G TPLH A+ G+ V FL+ A++ A SPL AA + + V LL K
Sbjct: 730 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 789
Query: 412 ATAQNIMNPKKVTRL 456
+ N ++ T L
Sbjct: 790 GASPNEVSSNGTTPL 804
Score = 55.5 bits (132), Expect = 1e-07
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Frame = +1
Query: 40 VSRKMSTRYHQAASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSR 213
+S+ T H AA L + + R +N + ++G+TP +A+ GN+ + ++ R
Sbjct: 235 LSKTGFTPLHIAAHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDR 294
Query: 214 GGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECV 393
G + TPLH AA NGH L++ GA I A + SP+ AA + +CV
Sbjct: 295 GAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCV 354
Query: 394 ALL 402
LL
Sbjct: 355 RLL 357
Score = 54.7 bits (130), Expect = 2e-07
Identities = 38/128 (29%), Positives = 61/128 (47%)
Frame = +1
Query: 91 LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAA 270
+ELL + T ++ E G+TP +A++ G+L ++ + RG P+ ++ TPLH AA
Sbjct: 420 MELLLK-TGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAA 478
Query: 271 SNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVT 450
GH +L+ A A D Q+PL AA V LL + + N+ T
Sbjct: 479 RAGHTEVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHT 538
Query: 451 RLKEQAQK 474
L A++
Sbjct: 539 PLHTAARE 546
Score = 52.4 bits (124), Expect = 9e-07
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Frame = +1
Query: 67 HQAASDSYLELLKEATRRDLNLSDE--DGMTPTLLAAYHGNLGALEIICSRGGDPDRCDI 240
H AA +L+ ++ + + + D D +TP +AA+ G+ +++ +G P+ +
Sbjct: 343 HMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRAL 402
Query: 241 WGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATA 420
G TPLH A H + L+ GA+I A+ +PL A+ V L + +
Sbjct: 403 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGAS 462
Query: 421 QNIMNPKKVTRLKEQAQ 471
N+ N K T L A+
Sbjct: 463 PNVSNVKVETPLHMAAR 479
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,520,964
Number of extensions: 1075941
Number of successful extensions: 4449
Number of sequences better than 1.0e-05: 98
Number of HSP's gapped: 4177
Number of HSP's successfully gapped: 190
Length of query: 473
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 368
Effective length of database: 12,463,779
Effective search space: 4586670672
Effective search space used: 4586670672
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009111
(1419 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_665872.2| ankyrin repeat and SAM domain-containing protei... 573 e-163
Alignment gi|NP_775748.2| Usher syndrome type-1G protein [Homo sapiens]. 222 6e-58
Alignment gi|NP_001182028.1| serine/threonine-protein phosphatase 6 regul... 75 1e-13
Alignment gi|NP_001182027.1| serine/threonine-protein phosphatase 6 regul... 75 1e-13
Alignment gi|NP_056014.2| serine/threonine-protein phosphatase 6 regulato... 75 1e-13
Alignment gi|NP_001161354.1| ankyrin repeat domain-containing protein 50 ... 67 3e-11
Alignment gi|NP_065070.1| ankyrin repeat domain-containing protein 50 iso... 67 3e-11
Alignment gi|NP_001182073.1| serine/threonine-protein phosphatase 6 regul... 64 3e-10
Alignment gi|NP_001139381.1| protein TANC1 isoform 2 [Homo sapiens]. 63 6e-10
Alignment gi|NP_203752.2| protein TANC1 isoform 1 [Homo sapiens]. 63 6e-10
>ref|NP_665872.2| ankyrin repeat and SAM domain-containing protein 4B [Homo sapiens].
Length = 417
Score = 573 bits (1476), Expect = e-163
Identities = 305/421 (72%), Positives = 319/421 (75%), Gaps = 4/421 (0%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
MSTRYHQAASDSYLELLKEAT+RDLNLSDEDGMTPTLLAAYHGNL ALEIICSRGGDPDR
Sbjct: 1 MSTRYHQAASDSYLELLKEATKRDLNLSDEDGMTPTLLAAYHGNLEALEIICSRGGDPDR 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLH+AASNGHAHCVSFL+NFGANIFALDNDLQ+PLDAAASREQNECVALLDKA
Sbjct: 61 CDIWGNTPLHFAASNGHAHCVSFLVNFGANIFALDNDLQTPLDAAASREQNECVALLDKA 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTYXXXXXXXXXXXXXXX 591
ATAQNIMNPKKVTRLKEQAQKNAR+QIKECERLQEKHQNKMA TY
Sbjct: 121 ATAQNIMNPKKVTRLKEQAQKNARRQIKECERLQEKHQNKMAHTYSKEESGTLSSSKGTF 180
Query: 592 XXXXXXXXXXXXXXXXLSKSIKDTFKLKYKKNKDTAEQVGKESRSGQRNVMEMFKXXXXX 771
LSK IKDTFK+K+KKNKDTAEQVGKE RSGQRNVME+F+
Sbjct: 181 SRSSPSNASAPGTFGSLSKGIKDTFKIKFKKNKDTAEQVGKEGRSGQRNVMEVFR----E 236
Query: 772 XXXXKFSGDFKEKLQFSLKGDSYVQHESILNRPGLGNVVFQSNRILSPEDISGSKREFGF 951
FSGDFKEKLQ S + D V HESILNRPGLG++VF+ NRI SPEDIS SKREFGF
Sbjct: 237 EEEDSFSGDFKEKLQLSAEEDGSVHHESILNRPGLGSIVFRRNRISSPEDISDSKREFGF 296
Query: 952 KMPS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHH 1119
K+PS ATPLEVFL S H
Sbjct: 297 KLPSELLQRQGASEADEGAADEEGEENGLKDDLPWDDDEVEWEEDVVDATPLEVFLLSQH 356
Query: 1120 LEEFLPIFMREQIDLEALLLCSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTS 1299
LEEFLPIF REQIDLEALLLCSDEDLQSI MQLGPRKKVLNAINRRKQVLQQPGQLVDTS
Sbjct: 357 LEEFLPIFKREQIDLEALLLCSDEDLQSIQMQLGPRKKVLNAINRRKQVLQQPGQLVDTS 416
Query: 1300 L 1302
L
Sbjct: 417 L 417
>ref|NP_775748.2| Usher syndrome type-1G protein [Homo sapiens].
Length = 461
Score = 222 bits (566), Expect = 6e-58
Identities = 102/165 (61%), Positives = 128/165 (77%)
Frame = +1
Query: 52 MSTRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
M+ +YH+AA D YLELLKEATR++LN DEDGMTPTL AAYHGNL +L +I SRGGDPD+
Sbjct: 1 MNDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDK 60
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
CDIWGNTPLH AASNGH HC+SFL++FGANI+ LDND +PLD AA + ECV LD
Sbjct: 61 CDIWGNTPLHLAASNGHLHCLSFLVSFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSI 120
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIKECERLQEKHQNKMARTY 546
A Q+ +NPK V +LK++A + A ++I+EC +LQ +H +M R Y
Sbjct: 121 AAKQSSLNPKLVGKLKDKAFREAERRIRECAKLQRRHHERMERRY 165
Score = 89.7 bits (221), Expect = 6e-18
Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Frame = +1
Query: 847 HESILNRPGLGNVVFQSNRILSPEDISGSKREFGF---------KMPSXXXXXXXXXXXX 999
H+S+ RPGLG +VF+ N + S + G RE G ++ S
Sbjct: 303 HDSLFTRPGLGTMVFRRNYLSS--GLHGLGREDGGLDGVGAPRGRLQSSPSLDDDSLGSA 360
Query: 1000 XXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLEVFLQSHHLEEFLPIFMREQIDLEALLL 1179
+PLE FL S H+E+F + +E+IDLEAL+L
Sbjct: 361 NSLQDRSCGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFAALLRQEKIDLEALML 420
Query: 1180 CSDEDLQSIXMQLGPRKKVLNAINRRKQVLQQPGQLVDTSL 1302
CSD DL+SI + LGPRKK+L A+ RR+Q +++P L DT L
Sbjct: 421 CSDLDLRSISVPLGPRKKILGAVRRRRQAMERPPALEDTEL 461
>ref|NP_001182028.1| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A isoform b [Homo sapiens].
Length = 899
Score = 75.5 bits (184), Expect = 1e-13
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 ASDSYLELLKEATRRDLNLSDEDG---MTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AS++ L++L E + D+ LSD D ++P LAAYHG+ ALE++ D D + G
Sbjct: 371 ASETPLDVLMETSGTDM-LSDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSG 429
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDL-QSPLDAAASREQNECVALLDKAATAQ 423
TPL AA GH CV LIN GA+I D L ++P+ AAA+ +EC+ LL A Q
Sbjct: 430 RTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ 489
Query: 424 NIMN 435
N ++
Sbjct: 490 NAVD 493
Score = 59.7 bits (143), Expect = 6e-09
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK-----EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA++ + E L+ + +++ D +G TP +L+ +G+ + + ++G +
Sbjct: 465 TPIHAAATNGHSECLRLLIGNAEPQNAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGAN 524
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVAL 399
D D WG T LH A GH CV L+ GA D+ ++P+ +AA AL
Sbjct: 525 VDAKDKWGRTALHRGAVTGHEECVDALLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGAL 584
Query: 400 LDKAAT 417
L AA+
Sbjct: 585 LQSAAS 590
Score = 57.4 bits (137), Expect = 3e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++ D+ G T AA GNL L ++ + G D ++ D +G +PLHYAA+N + C+
Sbjct: 243 DIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFA 302
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
L+ GA++ LD +PL AA S +C+ L
Sbjct: 303 LVGSGASVNDLDERGCTPLHYAATSDTDGKCLEYL 337
Score = 54.3 bits (129), Expect = 3e-07
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 43 SRKMSTRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICS 210
+ K T H AA+ ++ LELL D+N+ +DG TP + A HG + I
Sbjct: 115 NEKGFTPLHFAAASTHGALCLELLV-GNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQ 173
Query: 211 RGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
G D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 174 SGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDC 233
Score = 53.5 bits (127), Expect = 5e-07
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
GM P LAA G + S G D D D +G T LH AA+ G+ C++ L+N GA+
Sbjct: 218 GMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADF 277
Query: 325 FALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRL 456
D +SPL AA+ +C+ L + + N ++ + T L
Sbjct: 278 NKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL 321
Score = 50.4 bits (119), Expect = 4e-06
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N +D G TP AA+ ++ L+++ S + D G TPL AA NG + V L
Sbjct: 662 VNATDSKGRTPLHAAAFTDHVECLQLLLSHNAQVNSVDSTGKTPLMMAAENGQTNTVEML 721
Query: 304 I-NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMN 435
+ + A + DN + L A S+ L+ + T +N++N
Sbjct: 722 VSSASAELTLQDNSKNTALHLACSKGHETSALLILEKITDRNLIN 766
>ref|NP_001182027.1| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A isoform b [Homo sapiens].
Length = 899
Score = 75.5 bits (184), Expect = 1e-13
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 ASDSYLELLKEATRRDLNLSDEDG---MTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AS++ L++L E + D+ LSD D ++P LAAYHG+ ALE++ D D + G
Sbjct: 371 ASETPLDVLMETSGTDM-LSDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSG 429
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDL-QSPLDAAASREQNECVALLDKAATAQ 423
TPL AA GH CV LIN GA+I D L ++P+ AAA+ +EC+ LL A Q
Sbjct: 430 RTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ 489
Query: 424 NIMN 435
N ++
Sbjct: 490 NAVD 493
Score = 59.7 bits (143), Expect = 6e-09
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK-----EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA++ + E L+ + +++ D +G TP +L+ +G+ + + ++G +
Sbjct: 465 TPIHAAATNGHSECLRLLIGNAEPQNAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGAN 524
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVAL 399
D D WG T LH A GH CV L+ GA D+ ++P+ +AA AL
Sbjct: 525 VDAKDKWGRTALHRGAVTGHEECVDALLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGAL 584
Query: 400 LDKAAT 417
L AA+
Sbjct: 585 LQSAAS 590
Score = 57.4 bits (137), Expect = 3e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++ D+ G T AA GNL L ++ + G D ++ D +G +PLHYAA+N + C+
Sbjct: 243 DIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFA 302
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
L+ GA++ LD +PL AA S +C+ L
Sbjct: 303 LVGSGASVNDLDERGCTPLHYAATSDTDGKCLEYL 337
Score = 54.3 bits (129), Expect = 3e-07
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 43 SRKMSTRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICS 210
+ K T H AA+ ++ LELL D+N+ +DG TP + A HG + I
Sbjct: 115 NEKGFTPLHFAAASTHGALCLELLV-GNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQ 173
Query: 211 RGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
G D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 174 SGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDC 233
Score = 53.5 bits (127), Expect = 5e-07
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
GM P LAA G + S G D D D +G T LH AA+ G+ C++ L+N GA+
Sbjct: 218 GMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADF 277
Query: 325 FALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRL 456
D +SPL AA+ +C+ L + + N ++ + T L
Sbjct: 278 NKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL 321
Score = 50.4 bits (119), Expect = 4e-06
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N +D G TP AA+ ++ L+++ S + D G TPL AA NG + V L
Sbjct: 662 VNATDSKGRTPLHAAAFTDHVECLQLLLSHNAQVNSVDSTGKTPLMMAAENGQTNTVEML 721
Query: 304 I-NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMN 435
+ + A + DN + L A S+ L+ + T +N++N
Sbjct: 722 VSSASAELTLQDNSKNTALHLACSKGHETSALLILEKITDRNLIN 766
>ref|NP_056014.2| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A isoform a [Homo sapiens].
Length = 1053
Score = 75.5 bits (184), Expect = 1e-13
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +1
Query: 76 ASDSYLELLKEATRRDLNLSDEDG---MTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AS++ L++L E + D+ LSD D ++P LAAYHG+ ALE++ D D + G
Sbjct: 525 ASETPLDVLMETSGTDM-LSDSDNRATISPLHLAAYHGHHQALEVLVQSLLDLDVRNSSG 583
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDL-QSPLDAAASREQNECVALLDKAATAQ 423
TPL AA GH CV LIN GA+I D L ++P+ AAA+ +EC+ LL A Q
Sbjct: 584 RTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ 643
Query: 424 NIMN 435
N ++
Sbjct: 644 NAVD 647
Score = 59.7 bits (143), Expect = 6e-09
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK-----EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA++ + E L+ + +++ D +G TP +L+ +G+ + + ++G +
Sbjct: 619 TPIHAAATNGHSECLRLLIGNAEPQNAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGAN 678
Query: 223 PDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLD-AAASREQNECVAL 399
D D WG T LH A GH CV L+ GA D+ ++P+ +AA AL
Sbjct: 679 VDAKDKWGRTALHRGAVTGHEECVDALLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGAL 738
Query: 400 LDKAAT 417
L AA+
Sbjct: 739 LQSAAS 744
Score = 57.4 bits (137), Expect = 3e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D++ D+ G T AA GNL L ++ + G D ++ D +G +PLHYAA+N + C+
Sbjct: 397 DIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYAAANCNYQCLFA 456
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALL 402
L+ GA++ LD +PL AA S +C+ L
Sbjct: 457 LVGSGASVNDLDERGCTPLHYAATSDTDGKCLEYL 491
Score = 54.3 bits (129), Expect = 3e-07
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 43 SRKMSTRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICS 210
+ K T H AA+ ++ LELL D+N+ +DG TP + A HG + I
Sbjct: 269 NEKGFTPLHFAAASTHGALCLELLV-GNGADVNMKSKDGKTPLHMTALHGRFSRSQTIIQ 327
Query: 211 RGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
G D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 328 SGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGADTAKRGIHGMFPLHLAALSGFSDC 387
Score = 53.5 bits (127), Expect = 5e-07
Identities = 35/104 (33%), Positives = 52/104 (50%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
GM P LAA G + S G D D D +G T LH AA+ G+ C++ L+N GA+
Sbjct: 372 GMFPLHLAALSGFSDCCRKLLSSGFDIDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADF 431
Query: 325 FALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRL 456
D +SPL AA+ +C+ L + + N ++ + T L
Sbjct: 432 NKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGCTPL 475
Score = 52.4 bits (124), Expect = 1e-06
Identities = 34/127 (26%), Positives = 57/127 (44%)
Frame = +1
Query: 115 RRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCV 294
+ D+N D + TP AAY G+ +E++ G + D TPLH A ++ V
Sbjct: 31 KEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEEAV 90
Query: 295 SFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQK 474
L+ A++ A D + Q+PL AA+ + +C L + N+ + T L A
Sbjct: 91 QVLLKHSADVNARDKNWQTPLHIAAANKAVKCAEALVPLLSNVNVSDRAGRTALHHAAFS 150
Query: 475 NARKQIK 495
+ +K
Sbjct: 151 GHGEMVK 157
Score = 50.4 bits (119), Expect = 4e-06
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
++N+SD G T AA+ G+ ++++ SRG + + D +H+AA GH V
Sbjct: 132 NVNVSDRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKL 191
Query: 301 LINFGANIFALDNDLQSPLDAAAS 372
L++ GA + D +PL AAAS
Sbjct: 192 LVSHGAEVTCKDKKSYTPLHAAAS 215
Score = 50.4 bits (119), Expect = 4e-06
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N +D G TP AA+ ++ L+++ S + D G TPL AA NG + V L
Sbjct: 816 VNATDSKGRTPLHAAAFTDHVECLQLLLSHNAQVNSVDSTGKTPLMMAAENGQTNTVEML 875
Query: 304 I-NFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMN 435
+ + A + DN + L A S+ L+ + T +N++N
Sbjct: 876 VSSASAELTLQDNSKNTALHLACSKGHETSALLILEKITDRNLIN 920
>ref|NP_001161354.1| ankyrin repeat domain-containing protein 50 isoform 2 [Homo
sapiens].
Length = 1250
Score = 67.4 bits (163), Expect = 3e-11
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D+DGMTP L+AAY G++ ++++ G D D D G TPL AAS GHA V+ L+ +G
Sbjct: 566 DKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWG 625
Query: 316 ANIFALDNDLQSPLDAAASREQNECV-ALLDK 408
A + ++D++ ++ L A+++ E V LLD+
Sbjct: 626 AAVDSIDSEGRTVLSIASAQGNVEVVRTLLDR 657
Score = 59.7 bits (143), Expect = 6e-09
Identities = 41/115 (35%), Positives = 56/115 (48%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N D +G T AAY G+L + ++ SRG D + D G+TPL AA GH V+ L
Sbjct: 359 VNQCDSNGRTLLANAAYSGSLDVVNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCL 418
Query: 304 INFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
I GANI D D + L +AA E V+ L A + + T L+ A
Sbjct: 419 IGCGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSRTALRAAA 473
Score = 55.5 bits (132), Expect = 1e-07
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAY-----HGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHA 285
++N D DG T +AA G+ + ++ RG + D CD G TPL AA GH
Sbjct: 523 EVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHV 582
Query: 286 HCVSFLINFGANIFALDNDLQSPLDAAASREQNECV-ALLDKAATAQNIMNPKKVTRLKE 462
V L+ GA++ DN+ ++PL AAAS V LL A +I + +
Sbjct: 583 DVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIA 642
Query: 463 QAQKNARKQIKECER-LQEKHQN 528
AQ N +R L E H++
Sbjct: 643 SAQGNVEVVRTLLDRGLDENHRD 665
Score = 53.1 bits (126), Expect = 6e-07
Identities = 31/89 (34%), Positives = 43/89 (48%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D +G T +A+ GN+ + + RG D + D G TPLH AA GH LI G
Sbjct: 632 DSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQG 691
Query: 316 ANIFALDNDLQSPLDAAASREQNECVALL 402
A +DND + P A+ +CV +L
Sbjct: 692 ARTNEIDNDGRIPFILASQEGHYDCVQIL 720
Score = 50.8 bits (120), Expect = 3e-06
Identities = 30/94 (31%), Positives = 43/94 (45%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D DG + A L E G + + D G T LH + GH V
Sbjct: 759 DVNCKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHMEMVQV 818
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALL 402
LI + A++ A DN+ +S L +AA + + V LL
Sbjct: 819 LIAYHADVNAADNEKRSALQSAAWQGHVKVVQLL 852
Score = 50.4 bits (119), Expect = 4e-06
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
G T +AA G++ ++++ G DP+ D +G T + AA NGH+ + L +GA+
Sbjct: 866 GATALCIAAQEGHIDVVQVLLEHGADPNHADQFGRTAMRVAAKNGHSQIIKLLEKYGASS 925
Query: 325 F------ALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNP 438
+ Q PL + +S+ Q+ + +T M P
Sbjct: 926 LNGCSPSPVHTMEQKPLQSLSSKVQSLTIKSNSSGSTGGGDMQP 969
>ref|NP_065070.1| ankyrin repeat domain-containing protein 50 isoform 1 [Homo sapiens].
Length = 1429
Score = 67.4 bits (163), Expect = 3e-11
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D+DGMTP L+AAY G++ ++++ G D D D G TPL AAS GHA V+ L+ +G
Sbjct: 745 DKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWG 804
Query: 316 ANIFALDNDLQSPLDAAASREQNECV-ALLDK 408
A + ++D++ ++ L A+++ E V LLD+
Sbjct: 805 AAVDSIDSEGRTVLSIASAQGNVEVVRTLLDR 836
Score = 59.7 bits (143), Expect = 6e-09
Identities = 41/115 (35%), Positives = 56/115 (48%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N D +G T AAY G+L + ++ SRG D + D G+TPL AA GH V+ L
Sbjct: 538 VNQCDSNGRTLLANAAYSGSLDVVNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCL 597
Query: 304 INFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
I GANI D D + L +AA E V+ L A + + T L+ A
Sbjct: 598 IGCGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSRTALRAAA 652
Score = 55.5 bits (132), Expect = 1e-07
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAY-----HGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHA 285
++N D DG T +AA G+ + ++ RG + D CD G TPL AA GH
Sbjct: 702 EVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHV 761
Query: 286 HCVSFLINFGANIFALDNDLQSPLDAAASREQNECV-ALLDKAATAQNIMNPKKVTRLKE 462
V L+ GA++ DN+ ++PL AAAS V LL A +I + +
Sbjct: 762 DVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIA 821
Query: 463 QAQKNARKQIKECER-LQEKHQN 528
AQ N +R L E H++
Sbjct: 822 SAQGNVEVVRTLLDRGLDENHRD 844
Score = 53.1 bits (126), Expect = 6e-07
Identities = 31/89 (34%), Positives = 43/89 (48%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D +G T +A+ GN+ + + RG D + D G TPLH AA GH LI G
Sbjct: 811 DSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQG 870
Query: 316 ANIFALDNDLQSPLDAAASREQNECVALL 402
A +DND + P A+ +CV +L
Sbjct: 871 ARTNEIDNDGRIPFILASQEGHYDCVQIL 899
Score = 50.8 bits (120), Expect = 3e-06
Identities = 30/94 (31%), Positives = 43/94 (45%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D DG + A L E G + + D G T LH + GH V
Sbjct: 938 DVNCKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHMEMVQV 997
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALL 402
LI + A++ A DN+ +S L +AA + + V LL
Sbjct: 998 LIAYHADVNAADNEKRSALQSAAWQGHVKVVQLL 1031
Score = 50.4 bits (119), Expect = 4e-06
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 145 GMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFGANI 324
G T +AA G++ ++++ G DP+ D +G T + AA NGH+ + L +GA+
Sbjct: 1045 GATALCIAAQEGHIDVVQVLLEHGADPNHADQFGRTAMRVAAKNGHSQIIKLLEKYGASS 1104
Query: 325 F------ALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNP 438
+ Q PL + +S+ Q+ + +T M P
Sbjct: 1105 LNGCSPSPVHTMEQKPLQSLSSKVQSLTIKSNSSGSTGGGDMQP 1148
>ref|NP_001182073.1| serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit B isoform A [Homo sapiens].
Length = 993
Score = 63.9 bits (154), Expect = 3e-10
Identities = 43/136 (31%), Positives = 70/136 (51%)
Frame = +1
Query: 73 AASDSYLELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNT 252
A SD +LL +++ D+ G T AA GN+ ++++ S G D + D G T
Sbjct: 383 AHSDCCRKLLSSGF--EIDTPDKFGRTCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRT 440
Query: 253 PLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIM 432
PLHYAA+N H HC+ L+ GAN+ D+ ++ L AA+ + + +L A
Sbjct: 441 PLHYAAANCHFHCIETLVTTGANVNETDDWGRTALHYAAASDMDRNKTILGNAHD----- 495
Query: 433 NPKKVTRLKEQAQKNA 480
N +++ R +E +K A
Sbjct: 496 NSEELERARELKEKEA 511
Score = 62.8 bits (151), Expect = 8e-10
Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Frame = +1
Query: 67 HQAASDSY---LELLKEATRRDLNLSDEDGM-TPTLLAAYHGNLGALEIICSRGGDPDRC 234
H AA+ + LELL E T SD +P LAAY+G+ ALE++ D D
Sbjct: 537 HYAAAYGHRQCLELLLERTNSGFEESDSGATKSPLHLAAYNGHHQALEVLLQSLVDLDIR 596
Query: 235 DIWGNTPLHYAASNGHAHCVSFLINFGANIFALDN-DLQSPLDAAASREQNECVALL 402
D G T L AA GH CV LIN GA+IF DN ++PL A+ C+ LL
Sbjct: 597 DEKGRTALDLAAFKGHTECVEALINQGASIFVKDNVTKRTPLHASVINGHTLCLRLL 653
Score = 59.7 bits (143), Expect = 6e-09
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +1
Query: 58 TRYHQAASDSY----LELLKEATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDP 225
T H AA+ ++ LELL D+N+ +DG +P + A HG + + GG+
Sbjct: 274 TPLHFAAASTHGALCLELLVN-NGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEI 332
Query: 226 DRCDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNEC 390
D D GNTPLH AA GH ++ LI GA+ PL AA ++C
Sbjct: 333 DCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDC 387
Score = 57.0 bits (136), Expect = 4e-08
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
++ D+ G TP AA +G + ++ + + G + D +++GNT LH A NG V+
Sbjct: 198 EVTCKDKKGYTPLHAAASNGQINVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNE 257
Query: 301 LINFGANIFALDNDLQSPLD-AAASREQNECVALLDKAATAQNIMN 435
LI++GAN+ +N+ +PL AAAS C+ LL NI +
Sbjct: 258 LIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLVNNGADVNIQS 303
Score = 56.6 bits (135), Expect = 5e-08
Identities = 32/97 (32%), Positives = 51/97 (52%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
+++ D+DG TP +AA +G+ + + + G D +C I PLH AA N H+ C
Sbjct: 331 EIDCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDCCRK 390
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
L++ G I D ++ L AAA+ EC+ LL +
Sbjct: 391 LLSSGFEIDTPDKFGRTCLHAAAAGGNVECIKLLQSS 427
Score = 55.1 bits (131), Expect = 2e-07
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+++ D G TP +LA +G++ A+ ++ + + D DI G T LH GH CV L
Sbjct: 663 VDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANVDTVDILGCTALHRGIMTGHEECVQML 722
Query: 304 INFGANIFALDNDLQSPLDAAASR 375
+ +I D+ ++PL AA+R
Sbjct: 723 LEQEVSILCKDSRGRTPLHYAAAR 746
Score = 52.8 bits (125), Expect = 8e-07
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = +1
Query: 136 DEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFLINFG 315
D+ G TP AA+ ++ L+++ + D G T L AA NG A V L+N
Sbjct: 836 DDKGRTPLHAAAFADHVECLQLLLRHSAPVNAVDNSGKTALMMAAENGQAGAVDILVNSA 895
Query: 316 -ANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPK 441
A++ D DL +PL A S+ +C L+ ++++N K
Sbjct: 896 QADLTVKDKDLNTPLHLACSKGHEKCALLILDKIQDESLINEK 938
Score = 52.4 bits (124), Expect = 1e-06
Identities = 30/86 (34%), Positives = 46/86 (53%)
Frame = +1
Query: 124 LNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSFL 303
+N+SD G T AA +G++ + ++ ++G + + D LH+AA GH V+ L
Sbjct: 133 VNVSDRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALL 192
Query: 304 INFGANIFALDNDLQSPLDAAASREQ 381
IN GA + D +PL AAAS Q
Sbjct: 193 INHGAEVTCKDKKGYTPLHAAASNGQ 218
Score = 52.0 bits (123), Expect = 1e-06
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
T H+A + E ++ + D+N D++ TP +AA + + E+I +
Sbjct: 76 TPLHRAVASRSEEAVQVLIKHSADVNARDKNWQTPLHVAAANKAVKCAEVIIPLLSSVNV 135
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVALLDKA 411
D G T LH+AA NGH V+ L+ GANI A D + L AA + VALL
Sbjct: 136 SDRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINH 195
Query: 412 ATAQNIMNPKKVTRLKEQAQKNARKQIK 495
+ K T L A +K
Sbjct: 196 GAEVTCKDKKGYTPLHAAASNGQINVVK 223
Score = 52.0 bits (123), Expect = 1e-06
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEA-----TRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGD 222
T H AA+ + L E + D D G TP A Y+GN +E++ +
Sbjct: 738 TPLHYAAARGHATWLSELLQMALSEEDCCFKDNQGYTPLHWACYNGNENCIEVLLEQ--- 794
Query: 223 PDRC--DIWGN--TPLHYAASNGHAHCVSFLINF--GANIFALDNDLQSPLDAAASREQN 384
+C GN TPLH A N H +C S L+ + + D+ ++PL AAA +
Sbjct: 795 --KCFRKFIGNPFTPLHCAIINDHGNCASLLLGAIDSSIVSCRDDKGRTPLHAAAFADHV 852
Query: 385 ECVALLDKAATAQNIMNPKKVTRLKEQAQ 471
EC+ LL + + N ++ T L A+
Sbjct: 853 ECLQLLLRHSAPVNAVDNSGKTALMMAAE 881
Score = 51.6 bits (122), Expect = 2e-06
Identities = 32/116 (27%), Positives = 56/116 (48%)
Frame = +1
Query: 121 DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWGNTPLHYAASNGHAHCVSF 300
D+N D + TP +AA+ G+ +E++ G + D TPLH A ++ V
Sbjct: 33 DVNTLDSEKRTPLHVAAFLGDAEIIELLILSGARVNAKDNMWLTPLHRAVASRSEEAVQV 92
Query: 301 LINFGANIFALDNDLQSPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQA 468
LI A++ A D + Q+PL AA+ + +C ++ ++ N+ + T L A
Sbjct: 93 LIKHSADVNARDKNWQTPLHVAAANKAVKCAEVIIPLLSSVNVSDRGGRTALHHAA 148
Score = 50.1 bits (118), Expect = 5e-06
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 30/145 (20%)
Frame = +1
Query: 58 TRYHQAASDSYLELLK--EATRRDLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDR 231
T H AA+ +E +K +++ D + D+ G TP AA + + +E + + G + +
Sbjct: 407 TCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRTPLHYAAANCHFHCIETLVTTGANVNE 466
Query: 232 CDIWGNTPLHYAASN---------GHAH-------------------CVSFLINFGANIF 327
D WG T LHYAA++ G+AH C+ FL+ AN
Sbjct: 467 TDDWGRTALHYAAASDMDRNKTILGNAHDNSEELERARELKEKEATLCLEFLLQNDANPS 526
Query: 328 ALDNDLQSPLDAAASREQNECVALL 402
D + + + AA+ +C+ LL
Sbjct: 527 IRDKEGYNSIHYAAAYGHRQCLELL 551
Score = 49.7 bits (117), Expect = 7e-06
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Frame = +1
Query: 58 TRYHQAASDSYLELLKEATRRDLNLSDEDGMTPTLL--AAYHGNLGALEIICSRGGDPDR 231
T H AA + ++E++ + N++ D L AAY G+L + ++ + G +
Sbjct: 142 TALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTC 201
Query: 232 CDIWGNTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECV-ALLDK 408
D G TPLH AASNG + V L+N G I ++ + L A Q+ V L+D
Sbjct: 202 KDKKGYTPLHAAASNGQINVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNELIDY 261
Query: 409 AATAQNIMN 435
A N
Sbjct: 262 GANVNQPNN 270
>ref|NP_001139381.1| protein TANC1 isoform 2 [Homo sapiens].
Length = 1390
Score = 63.2 bits (152), Expect = 6e-10
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +1
Query: 73 AASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AA + ++++ R D+NLSD+ G TP ++AA G+L +E + S+G D G
Sbjct: 1111 AARQGHWQIVRLLLERGCDVNLSDKQGRTPLMVAACEGHLSTVEFLLSKGAALSSLDKEG 1170
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVA-LLDKAATAQ 423
+ L +A GH V +L+ GA I D + ++PLD AA E V L++K A +
Sbjct: 1171 LSALSWACLKGHRAVVQYLVEEGAAIDQTDKNGRTPLDLAAFYGDAETVLYLVEKGAVIE 1230
Query: 424 NI 429
++
Sbjct: 1231 HV 1232
>ref|NP_203752.2| protein TANC1 isoform 1 [Homo sapiens].
Length = 1861
Score = 63.2 bits (152), Expect = 6e-10
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +1
Query: 73 AASDSYLELLKEATRR--DLNLSDEDGMTPTLLAAYHGNLGALEIICSRGGDPDRCDIWG 246
AA + ++++ R D+NLSD+ G TP ++AA G+L +E + S+G D G
Sbjct: 1119 AARQGHWQIVRLLLERGCDVNLSDKQGRTPLMVAACEGHLSTVEFLLSKGAALSSLDKEG 1178
Query: 247 NTPLHYAASNGHAHCVSFLINFGANIFALDNDLQSPLDAAASREQNECVA-LLDKAATAQ 423
+ L +A GH V +L+ GA I D + ++PLD AA E V L++K A +
Sbjct: 1179 LSALSWACLKGHRAVVQYLVEEGAAIDQTDKNGRTPLDLAAFYGDAETVLYLVEKGAVIE 1238
Query: 424 NI 429
++
Sbjct: 1239 HV 1240
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 51,117,181
Number of extensions: 1271095
Number of successful extensions: 5470
Number of sequences better than 1.0e-05: 115
Number of HSP's gapped: 5104
Number of HSP's successfully gapped: 229
Length of query: 473
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 367
Effective length of database: 14,802,980
Effective search space: 5432693660
Effective search space used: 5432693660
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009111
(1419 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr03 1199 0.0
>Sscrofa_Chr03
|| Length = 144787322
Score = 1199 bits (605), Expect = 0.0
Identities = 634/640 (99%), Gaps = 3/640 (0%)
Strand = Plus / Minus
Query: 783 caaattctcaggggacttcaaagagaaactccagttctcattaaaaggggacagctatgt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576503 caaattctcaggggacttcaaagagaaactccagttctcattaaaaggggacagctatgt 25576444
Query: 843 gcaacatgaatccatcctcaaccgtccaggtctaggaaatgttgtttttcaaagcaacag 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576443 gcaacatgaatccatcctcaaccgtccaggtctaggaaatgttgtttttcaaagcaacag 25576384
Query: 903 aatcttgagccctgaagacatctcaggtagcaagagggagtttgggtttaaaatgcccag 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576383 aatcttgagccctgaagacatctcaggtagcaagagggagtttgggtttaaaatgcccag 25576324
Query: 963 tgaattgcttcagtgacaagaagcatctgaggcagaggcagaggaagaagaggacaacca 1022
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576323 tgaattgcttcagagacaagaagcatctgaggcagaggcagaggaagaagaggacaacca 25576264
Query: 1023 gcgtgaggatgatctgccttgggatgaggatgaagtggagtgggaggaagatgtggttga 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576263 gcgtgaggatgatctgccttgggatgaggatgaagtggagtgggaggaagatgtggttga 25576204
Query: 1083 cgctactcccctggaagtgttcttgcagtcccaccacctggaagaattccttcctatttt 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576203 cgctactcccctggaagtgttcttgcagtcccaccacctggaagaattccttcctatttt 25576144
Query: 1143 catgagagagcagattgatctggaagcgctgttgctttgctccgatgaggaccttcagag 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576143 catgagagagcagattgatctggaagcgctgttgctttgctccgatgaggaccttcagag 25576084
Query: 1203 catancaatgcagctgggtcccaggaagaaagttcttaatgccataaacagaaggaagca 1262
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576083 catacaaatgcagctgggtcccaggaagaaagttcttaatgccataaacagaaggaagca 25576024
Query: 1263 ggtgctacaacagcctgggcagttggttgacaccagcctctgatggagtattgggtccct 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576023 ggtgctacaacagcctgggcagttggttgacaccagcctctgatggagtattgggtccct 25575964
Query: 1323 ggggtgagtctgcagcagtggggtgatgctgtagctcaatggaaaca-tctaggcatta- 1380
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 25575963 ggggtgagtctgcagcagtggggtgatgctgtagctcaatggaaacattctaggcattac 25575904
Query: 1381 ccactagtctacccagga-tagactgctgggtttctaggg 1419
|||||||||||||||||| |||||||||||||||||||||
Sbjct: 25575903 ccactagtctacccaggattagactgctgggtttctaggg 25575864
Score = 1199 bits (605), Expect = 0.0
Identities = 634/640 (99%), Gaps = 3/640 (0%)
Strand = Plus / Minus
Query: 783 caaattctcaggggacttcaaagagaaactccagttctcattaaaaggggacagctatgt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644389 caaattctcaggggacttcaaagagaaactccagttctcattaaaaggggacagctatgt 25644330
Query: 843 gcaacatgaatccatcctcaaccgtccaggtctaggaaatgttgtttttcaaagcaacag 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644329 gcaacatgaatccatcctcaaccgtccaggtctaggaaatgttgtttttcaaagcaacag 25644270
Query: 903 aatcttgagccctgaagacatctcaggtagcaagagggagtttgggtttaaaatgcccag 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644269 aatcttgagccctgaagacatctcaggtagcaagagggagtttgggtttaaaatgcccag 25644210
Query: 963 tgaattgcttcagtgacaagaagcatctgaggcagaggcagaggaagaagaggacaacca 1022
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644209 tgaattgcttcagagacaagaagcatctgaggcagaggcagaggaagaagaggacaacca 25644150
Query: 1023 gcgtgaggatgatctgccttgggatgaggatgaagtggagtgggaggaagatgtggttga 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644149 gcgtgaggatgatctgccttgggatgaggatgaagtggagtgggaggaagatgtggttga 25644090
Query: 1083 cgctactcccctggaagtgttcttgcagtcccaccacctggaagaattccttcctatttt 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644089 cgctactcccctggaagtgttcttgcagtcccaccacctggaagaattccttcctatttt 25644030
Query: 1143 catgagagagcagattgatctggaagcgctgttgctttgctccgatgaggaccttcagag 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644029 catgagagagcagattgatctggaagcgctgttgctttgctccgatgaggaccttcagag 25643970
Query: 1203 catancaatgcagctgggtcccaggaagaaagttcttaatgccataaacagaaggaagca 1262
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25643969 catacaaatgcagctgggtcccaggaagaaagttcttaatgccataaacagaaggaagca 25643910
Query: 1263 ggtgctacaacagcctgggcagttggttgacaccagcctctgatggagtattgggtccct 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25643909 ggtgctacaacagcctgggcagttggttgacaccagcctctgatggagtattgggtccct 25643850
Query: 1323 ggggtgagtctgcagcagtggggtgatgctgtagctcaatggaaaca-tctaggcatta- 1380
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 25643849 ggggtgagtctgcagcagtggggtgatgctgtagctcaatggaaacattctaggcattac 25643790
Query: 1381 ccactagtctacccagga-tagactgctgggtttctaggg 1419
|||||||||||||||||| |||||||||||||||||||||
Sbjct: 25643789 ccactagtctacccaggattagactgctgggtttctaggg 25643750
Score = 1074 bits (542), Expect = 0.0
Identities = 542/542 (100%)
Strand = Plus / Minus
Query: 215 gaggggatcctgatagatgtgacatctggggaaatactcctttacattatgcagcctcca 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25577071 gaggggatcctgatagatgtgacatctggggaaatactcctttacattatgcagcctcca 25577012
Query: 275 atggtcatgctcactgtgtctcattcctgatcaactttggtgccaacatctttgccctgg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25577011 atggtcatgctcactgtgtctcattcctgatcaactttggtgccaacatctttgccctgg 25576952
Query: 335 acaatgatttacagtctccactggatgctgctgccagcagagagcagaacgaatgtgttg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576951 acaatgatttacagtctccactggatgctgctgccagcagagagcagaacgaatgtgttg 25576892
Query: 395 ctctcttggataaggccgccactgcccagaacatcatgaaccccaagaaggtcaccaggc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576891 ctctcttggataaggccgccactgcccagaacatcatgaaccccaagaaggtcaccaggc 25576832
Query: 455 tgaaggagcaggctcagaagaatgccaggaagcagatcaaagagtgcgaaaggctccagg 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576831 tgaaggagcaggctcagaagaatgccaggaagcagatcaaagagtgcgaaaggctccagg 25576772
Query: 515 agaagcaccaaaataagatggcccgtacctacagcaaggaggaatctgggacgctttctt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576771 agaagcaccaaaataagatggcccgtacctacagcaaggaggaatctgggacgctttctt 25576712
Query: 575 cttccaagagcactttctccaggtcatccttttcaaatgcttctgcatccaatacattcg 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576711 cttccaagagcactttctccaggtcatccttttcaaatgcttctgcatccaatacattcg 25576652
Query: 635 ggtcactgtctaagagcattaaagacactttcaagttaaagtacaagaagaacaaagata 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576651 ggtcactgtctaagagcattaaagacactttcaagttaaagtacaagaagaacaaagata 25576592
Query: 695 cagcagagcaggtagggaaggagagcagaagtgggcagaggaatgtgatggaaatgttta 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25576591 cagcagagcaggtagggaaggagagcagaagtgggcagaggaatgtgatggaaatgttta 25576532
Query: 755 aa 756
||
Sbjct: 25576531 aa 25576530
Score = 1074 bits (542), Expect = 0.0
Identities = 542/542 (100%)
Strand = Plus / Minus
Query: 215 gaggggatcctgatagatgtgacatctggggaaatactcctttacattatgcagcctcca 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644957 gaggggatcctgatagatgtgacatctggggaaatactcctttacattatgcagcctcca 25644898
Query: 275 atggtcatgctcactgtgtctcattcctgatcaactttggtgccaacatctttgccctgg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644897 atggtcatgctcactgtgtctcattcctgatcaactttggtgccaacatctttgccctgg 25644838
Query: 335 acaatgatttacagtctccactggatgctgctgccagcagagagcagaacgaatgtgttg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644837 acaatgatttacagtctccactggatgctgctgccagcagagagcagaacgaatgtgttg 25644778
Query: 395 ctctcttggataaggccgccactgcccagaacatcatgaaccccaagaaggtcaccaggc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644777 ctctcttggataaggccgccactgcccagaacatcatgaaccccaagaaggtcaccaggc 25644718
Query: 455 tgaaggagcaggctcagaagaatgccaggaagcagatcaaagagtgcgaaaggctccagg 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644717 tgaaggagcaggctcagaagaatgccaggaagcagatcaaagagtgcgaaaggctccagg 25644658
Query: 515 agaagcaccaaaataagatggcccgtacctacagcaaggaggaatctgggacgctttctt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644657 agaagcaccaaaataagatggcccgtacctacagcaaggaggaatctgggacgctttctt 25644598
Query: 575 cttccaagagcactttctccaggtcatccttttcaaatgcttctgcatccaatacattcg 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644597 cttccaagagcactttctccaggtcatccttttcaaatgcttctgcatccaatacattcg 25644538
Query: 635 ggtcactgtctaagagcattaaagacactttcaagttaaagtacaagaagaacaaagata 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644537 ggtcactgtctaagagcattaaagacactttcaagttaaagtacaagaagaacaaagata 25644478
Query: 695 cagcagagcaggtagggaaggagagcagaagtgggcagaggaatgtgatggaaatgttta 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25644477 cagcagagcaggtagggaaggagagcagaagtgggcagaggaatgtgatggaaatgttta 25644418
Query: 755 aa 756
||
Sbjct: 25644417 aa 25644416
Score = 410 bits (207), Expect = e-112
Identities = 214/215 (99%), Gaps = 1/215 (0%)
Strand = Plus / Minus
Query: 2 tcctgctctgcctggggtgatatttggccggagctttggtgagcagaaaaa-tgtccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 25548332 tcctgctctgcctggggtgatatttggccggagctttggtgagcagaaaaaatgtccact 25548273
Query: 61 cgctaccaccaagctgctagtgacagctacctggaacttctgaaagaggctaccaggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25548272 cgctaccaccaagctgctagtgacagctacctggaacttctgaaagaggctaccaggaga 25548213
Query: 121 gatctgaatctttctgatgaagatggcatgactcccacactcctggcagcctaccatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25548212 gatctgaatctttctgatgaagatggcatgactcccacactcctggcagcctaccatggg 25548153
Query: 181 aacttgggagccctagaaataatttgcagcagagg 215
|||||||||||||||||||||||||||||||||||
Sbjct: 25548152 aacttgggagccctagaaataatttgcagcagagg 25548118
Score = 410 bits (207), Expect = e-112
Identities = 214/215 (99%), Gaps = 1/215 (0%)
Strand = Plus / Minus
Query: 2 tcctgctctgcctggggtgatatttggccggagctttggtgagcagaaaaa-tgtccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 25654461 tcctgctctgcctggggtgatatttggccggagctttggtgagcagaaaaaatgtccact 25654402
Query: 61 cgctaccaccaagctgctagtgacagctacctggaacttctgaaagaggctaccaggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25654401 cgctaccaccaagctgctagtgacagctacctggaacttctgaaagaggctaccaggaga 25654342
Query: 121 gatctgaatctttctgatgaagatggcatgactcccacactcctggcagcctaccatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25654341 gatctgaatctttctgatgaagatggcatgactcccacactcctggcagcctaccatggg 25654282
Query: 181 aacttgggagccctagaaataatttgcagcagagg 215
|||||||||||||||||||||||||||||||||||
Sbjct: 25654281 aacttgggagccctagaaataatttgcagcagagg 25654247
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 47,011,129
Number of extensions: 330
Number of successful extensions: 330
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 324
Number of HSP's successfully gapped: 6
Length of query: 1419
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1398
Effective length of database: 2,808,413,156
Effective search space: 3926161592088
Effective search space used: 3926161592088
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)