Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009134
(1646 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001032396.1| monocarboxylate transporter 1 [Bos taurus]. 762 0.0
Alignment gi|XP_002686222.1| PREDICTED: solute carrier family 16, member ... 645 0.0
Alignment gi|XP_586975.2| PREDICTED: solute carrier family 16, member 1-l... 645 0.0
Alignment gi|NP_001069804.1| monocarboxylate transporter 2 [Bos taurus]. 497 e-140
Alignment gi|XP_001257149.1| PREDICTED: solute carrier family 16, member ... 353 2e-97
Alignment gi|NP_001103450.1| monocarboxylate transporter 4 [Bos taurus]. 321 1e-87
Alignment gi|XP_002687978.1| PREDICTED: solute carrier family 16, member ... 309 4e-84
Alignment gi|XP_612876.2| PREDICTED: solute carrier family 16, member 8 (... 309 4e-84
Alignment gi|XP_610029.2| PREDICTED: solute carrier family 16, member 5 [... 214 2e-55
Alignment gi|XP_002696228.1| PREDICTED: solute carrier family 16, member ... 213 4e-55
>ref|NP_001032396.1| monocarboxylate transporter 1 [Bos taurus].
Length = 501
Score = 762 bits (1968), Expect = 0.0
Identities = 385/479 (80%), Positives = 401/479 (83%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPPAVGGPVGYTPPD FISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW
Sbjct: 1 MPPAVGGPVGYTPPDGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMYGGGPISS+LVNKYGSRPVM AASFCNTVQELY +GVIG
Sbjct: 61 ISSIMLAVMYGGGPISSVLVNKYGSRPVMIVGGILSGSGLIAASFCNTVQELYFSVGVIG 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFF IYGWRGSFLI
Sbjct: 121 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFMIYGWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAGALMRPIGPKPTTA+K +SK SLQEA K E KKGASDANTDLIGGNPK+
Sbjct: 181 LGGLLLNCCVAGALMRPIGPKPTTAEKEKSKGSLQEAGKYETKKGASDANTDLIGGNPKE 240
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EK+S+FQTLN FLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKS+HYSSEKAAF
Sbjct: 241 EKKSIFQTLNTFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSKHYSSEKAAF 300
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARPSMGLVANTKW+RPRVQYFFAASIIANG+CHL APLSS+YI CIYA
Sbjct: 301 LLSILAFVDMVARPSMGLVANTKWVRPRVQYFFAASIIANGLCHLAAPLSSTYIELCIYA 360
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPV NDIYGDYK
Sbjct: 361 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPVLGRLNDIYGDYK 420
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLAXXXXXXXXXXXXXXXXXTSIDAAEKPKKLL 1642
YTYWAC MGINYRLL T++D AEKPK+++
Sbjct: 421 YTYWACGIILIVAGIYLFIGMGINYRLLEKEQKAEKQQKKESKDEETNVDVAEKPKEVI 479
>ref|XP_002686222.1| PREDICTED: solute carrier family 16, member 1-like [Bos taurus].
Length = 491
Score = 645 bits (1664), Expect = 0.0
Identities = 319/449 (71%), Positives = 355/449 (79%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPP+ GGP GYTPPD FISIGF+ AF KSI+VF+KEI IF A+TSEVSW
Sbjct: 1 MPPSNGGPAGYTPPDGGWGWAVVVGAFISIGFACAFGKSISVFYKEIGEIFKASTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
+SSI+ AVMY GGPISS+LVNKYGSRPVM AASFC+TV +LYLCIGVI
Sbjct: 61 LSSIVFAVMYAGGPISSVLVNKYGSRPVMILGGCLSGCGLIAASFCSTVMQLYLCIGVIV 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNLNPALT+IGKYFYK+RPLA+GLAMAGSPVFLS +APLNQA F +GWRGSFLI
Sbjct: 121 GLGLAFNLNPALTIIGKYFYKKRPLASGLAMAGSPVFLSAMAPLNQALFATFGWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAGALMRPIGPKPTT +K +SKE LQEA K + KGA + T + GGN K
Sbjct: 181 LGGLLLNCCVAGALMRPIGPKPTTTEKEKSKEFLQEAGKCDTNKGAGNPKTGVNGGNSPK 240
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EKQS+FQ +NK LDLSL KHRGFLLYLSGN+++ FG+ TPLVF+SNY KSQ YS+EKAAF
Sbjct: 241 EKQSLFQRVNKLLDLSLLKHRGFLLYLSGNMIVSFGVATPLVFISNYAKSQRYSNEKAAF 300
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARP MG VANTKW+RPR+QYF AASI NGVCH++ PLSSSYIGFC+Y+
Sbjct: 301 LLSILAFVDMVARPCMGFVANTKWVRPRIQYFLAASITMNGVCHMLVPLSSSYIGFCVYS 360
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
G GFAFGW +VLFETLMDLVGPQRFSSAVGLVTIVECCPV NDIYGDYK
Sbjct: 361 GVLGFAFGWFGAVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPVLGRLNDIYGDYK 420
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLA 1552
YTYWAC +GINYRL A
Sbjct: 421 YTYWACGIILIVSGIYLFIGLGINYRLEA 449
>ref|XP_586975.2| PREDICTED: solute carrier family 16, member 1-like [Bos taurus].
Length = 491
Score = 645 bits (1664), Expect = 0.0
Identities = 319/449 (71%), Positives = 355/449 (79%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPP+ GGP GYTPPD FISIGF+ AF KSI+VF+KEI IF A+TSEVSW
Sbjct: 1 MPPSNGGPAGYTPPDGGWGWAVVVGAFISIGFACAFGKSISVFYKEIGEIFKASTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
+SSI+ AVMY GGPISS+LVNKYGSRPVM AASFC+TV +LYLCIGVI
Sbjct: 61 LSSIVFAVMYAGGPISSVLVNKYGSRPVMILGGCLSGCGLIAASFCSTVMQLYLCIGVIV 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNLNPALT+IGKYFYK+RPLA+GLAMAGSPVFLS +APLNQA F +GWRGSFLI
Sbjct: 121 GLGLAFNLNPALTIIGKYFYKKRPLASGLAMAGSPVFLSAMAPLNQALFATFGWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAGALMRPIGPKPTT +K +SKE LQEA K + KGA + T + GGN K
Sbjct: 181 LGGLLLNCCVAGALMRPIGPKPTTTEKEKSKEFLQEAGKCDTNKGAGNPKTGVNGGNSPK 240
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EKQS+FQ +NK LDLSL KHRGFLLYLSGN+++ FG+ TPLVF+SNY KSQ YS+EKAAF
Sbjct: 241 EKQSLFQRVNKLLDLSLLKHRGFLLYLSGNMIVSFGVATPLVFISNYAKSQRYSNEKAAF 300
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARP MG VANTKW+RPR+QYF AASI NGVCH++ PLSSSYIGFC+Y+
Sbjct: 301 LLSILAFVDMVARPCMGFVANTKWVRPRIQYFLAASITMNGVCHMLVPLSSSYIGFCVYS 360
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
G GFAFGW +VLFETLMDLVGPQRFSSAVGLVTIVECCPV NDIYGDYK
Sbjct: 361 GVLGFAFGWFGAVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPVLGRLNDIYGDYK 420
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLA 1552
YTYWAC +GINYRL A
Sbjct: 421 YTYWACGIILIVSGIYLFIGLGINYRLEA 449
>ref|NP_001069804.1| monocarboxylate transporter 2 [Bos taurus].
Length = 482
Score = 497 bits (1280), Expect = e-140
Identities = 254/449 (56%), Positives = 309/449 (68%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPP G P + PPD FISIGFSYAFPK++TVFFKEI+ +FN T SE++W
Sbjct: 1 MPPPGGTPPPHPPPDGGWGWVVVGAAFISIGFSYAFPKAVTVFFKEIQLLFNTTYSEIAW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISS MLAVMY GGPISS+LVNKYGSRPV+ +AS+ V ELY +G+I
Sbjct: 61 ISSTMLAVMYAGGPISSVLVNKYGSRPVVMVGGLLCCLGMVSASYSTNVVELYFTMGLIC 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNL PALT+IGKYFYK+RP+ANGLAMAGSPVFLSTLAP NQ F YGW+GSF+I
Sbjct: 121 GLGLAFNLQPALTIIGKYFYKKRPVANGLAMAGSPVFLSTLAPFNQYLFNTYGWKGSFMI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAG+LMRP+ PK +T K +K ++E + S K ++
Sbjct: 181 LGGLLLNCCVAGSLMRPVEPKASTESK--NKVGVRETDCSMKK---------------RQ 223
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
+K SV++ +NK+LD SLFKHRGFL+YLSGNV+MF G F P++FL+ Y K + AAF
Sbjct: 224 KKLSVWEEINKYLDFSLFKHRGFLIYLSGNVIMFLGFFAPVIFLAPYAKDKGIDEYSAAF 283
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLS++AFVDM ARP++GL+AN+K IRPR+QYFF+ +++ G+CHL+ L+ Y +YA
Sbjct: 284 LLSVMAFVDMFARPTVGLIANSKLIRPRIQYFFSFAVMFTGICHLLCALAEDYTSLVVYA 343
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
FFG FG +SSVLFETLMDLVG QRFSSAVGLVT+VECCPV D G YK
Sbjct: 344 VFFGLGFGSVSSVLFETLMDLVGAQRFSSAVGLVTVVECCPVLLGPPLAGKLVDETGQYK 403
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLA 1552
Y Y AC NYRLLA
Sbjct: 404 YMYLACGAIVVLASVWLLIGNAANYRLLA 432
>ref|XP_001257149.1| PREDICTED: solute carrier family 16, member 7-like, partial [Bos
taurus].
Length = 271
Score = 353 bits (906), Expect = 2e-97
Identities = 173/281 (61%), Positives = 215/281 (76%)
Frame = +2
Query: 569 LGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLIL 748
LGLAFNL PALT+IGKYFYK+RP+ANGLAMAGSPVFLSTLAP NQ F YGW+GSF+IL
Sbjct: 1 LGLAFNLQPALTIIGKYFYKKRPVANGLAMAGSPVFLSTLAPFNQYLFNTYGWKGSFMIL 60
Query: 749 GGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKE 928
GGLLLNCCVAG+LMRP+ PK +T K +K ++E + S K+ ++
Sbjct: 61 GGLLLNCCVAGSLMRPVEPKASTESK--NKVGVRETDCSMKKR---------------QK 103
Query: 929 KQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFL 1108
K SV++ +NK+LD SLFKHRGFL+YLSGNV+MF G F P++FL+ Y K + AAFL
Sbjct: 104 KLSVWEEINKYLDFSLFKHRGFLIYLSGNVIMFLGFFAPVIFLAPYAKDKGIDEYSAAFL 163
Query: 1109 LSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAG 1288
LS++AFVDM ARP++GL+AN+K IRPR+QYFF+ +++ G+CHL+ L+ Y +YA
Sbjct: 164 LSVMAFVDMFARPTVGLIANSKLIRPRIQYFFSFAVMFTGICHLLCALAEDYTSLVVYAV 223
Query: 1289 FFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPV 1411
FFG FG +SSVLFETLMDLVG QRFSSAVGLVT+VECCPV
Sbjct: 224 FFGLGFGSVSSVLFETLMDLVGAQRFSSAVGLVTVVECCPV 264
>ref|NP_001103450.1| monocarboxylate transporter 4 [Bos taurus].
Length = 461
Score = 321 bits (822), Expect = 1e-87
Identities = 174/417 (41%), Positives = 236/417 (56%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGIKAPDGGWGWAILWGCFVITGFSYAFPKAVSVFFKELMREFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM +ASFC ++ +LYL GV+ GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLAGGLLASLGMVSASFCGSIIQLYLTTGVLTGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFNKRRPMANGLAAAGSPVFLCALSPLGQVLQDHYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVF 943
NCCV ALMRP+ EA + +S G P ++
Sbjct: 189 NCCVCAALMRPL----------------------EAPRQSS-------GSGPAPQRPP-- 217
Query: 944 QTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILA 1123
+ LDLS+F+ RGF++Y +M GLF P VF+ +Y K +AAFLL+IL
Sbjct: 218 ---RRLLDLSVFRDRGFVIYALAASIMVLGLFVPPVFVVSYAKDLGVPDTQAAFLLTILG 274
Query: 1124 FVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFA 1303
FVD+ ARP+ G + K +RP Y F+ ++ NG L +S+Y G ++ FFG +
Sbjct: 275 FVDIFARPTAGFITGLKKVRPYSVYLFSFAMFFNGFADLTGSTASNYGGLVVFCIFFGIS 334
Query: 1304 FGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
+G + ++ FE LM +VG Q+FSSA+GLV ++E V D Y+Y +
Sbjct: 335 YGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAIAVLIGPPSGGKLLDATHVYQYVF 391
>ref|XP_002687978.1| PREDICTED: solute carrier family 16, member 8 (monocarboxylic acid
transporter 3) [Bos taurus].
Length = 497
Score = 309 bits (792), Expect = 4e-84
Identities = 175/424 (41%), Positives = 241/424 (56%), Gaps = 3/424 (0%)
Frame = +2
Query: 215 AVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISS 394
A G G PPD F+ GF+Y FPK+++VFF+ + F A S+ +W+SS
Sbjct: 3 ASGPRRGPGPPDGGWGWAVLGACFVITGFAYGFPKAVSVFFRALMRDFGAGYSDTAWVSS 62
Query: 395 IMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLG 574
IMLA++YG GP+SSILV ++G RPVM ASF + ELYL GV+ GLG
Sbjct: 63 IMLAMLYGTGPVSSILVTRFGCRPVMLVGGLLASAGMILASFATRLLELYLTAGVLTGLG 122
Query: 575 LAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGG 754
LA N P+L M+G YF +RRPLANGLA AGSPVFLS L+PL Q +GWRG FL+LGG
Sbjct: 123 LALNFQPSLIMLGLYFERRRPLANGLAAAGSPVFLSALSPLGQQLLEHFGWRGGFLLLGG 182
Query: 755 LLLNCCVAGALMRP---IGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LLLNCC GA+MRP GP+P ++S +A G ++A+ + G +
Sbjct: 183 LLLNCCACGAVMRPPPGPGPRP-------RRDSAGDA------PGEAEAH---LAGPRVR 226
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
E S +T + LD+++ R F +Y LM GLF P + L NY K +AAF
Sbjct: 227 EAPSGGRTRRRLLDVTVCADRAFAVYAVTKFLMALGLFVPAILLVNYAKDAGVPDSEAAF 286
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSI+ FVD+VARP+ G +A +RP V Y F+ +++ANG+ L + + SY +
Sbjct: 287 LLSIVGFVDIVARPACGALAGLARLRPHVAYLFSLALMANGLTDLSSARARSYSALVAFC 346
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
FG ++G + ++ FE LM VG RF SA+GLV ++E V D +Y+
Sbjct: 347 IAFGLSYGMVGALQFEVLMAAVGAPRFPSALGLVLLLEAVAVLIGPPSAGRLVDALKNYE 406
Query: 1466 YTYW 1477
++
Sbjct: 407 IIFY 410
>ref|XP_612876.2| PREDICTED: solute carrier family 16, member 8 (monocarboxylic acid
transporter 3) [Bos taurus].
Length = 497
Score = 309 bits (792), Expect = 4e-84
Identities = 175/424 (41%), Positives = 241/424 (56%), Gaps = 3/424 (0%)
Frame = +2
Query: 215 AVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISS 394
A G G PPD F+ GF+Y FPK+++VFF+ + F A S+ +W+SS
Sbjct: 3 ASGPRRGPGPPDGGWGWAVLGACFVITGFAYGFPKAVSVFFRALMRDFGAGYSDTAWVSS 62
Query: 395 IMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLG 574
IMLA++YG GP+SSILV ++G RPVM ASF + ELYL GV+ GLG
Sbjct: 63 IMLAMLYGTGPVSSILVTRFGCRPVMLVGGLLASAGMILASFATRLLELYLTAGVLTGLG 122
Query: 575 LAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGG 754
LA N P+L M+G YF +RRPLANGLA AGSPVFLS L+PL Q +GWRG FL+LGG
Sbjct: 123 LALNFQPSLIMLGLYFERRRPLANGLAAAGSPVFLSALSPLGQQLLEHFGWRGGFLLLGG 182
Query: 755 LLLNCCVAGALMRP---IGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LLLNCC GA+MRP GP+P ++S +A G ++A+ + G +
Sbjct: 183 LLLNCCACGAVMRPPPGPGPRP-------RRDSAGDA------PGEAEAH---LAGPRVR 226
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
E S +T + LD+++ R F +Y LM GLF P + L NY K +AAF
Sbjct: 227 EAPSGGRTRRRLLDVTVCADRAFAVYAVTKFLMALGLFVPAILLVNYAKDAGVPDSEAAF 286
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSI+ FVD+VARP+ G +A +RP V Y F+ +++ANG+ L + + SY +
Sbjct: 287 LLSIVGFVDIVARPACGALAGLARLRPHVAYLFSLALMANGLTDLSSARARSYSALVAFC 346
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
FG ++G + ++ FE LM VG RF SA+GLV ++E V D +Y+
Sbjct: 347 IAFGLSYGMVGALQFEVLMAAVGAPRFPSALGLVLLLEAVAVLIGPPSAGRLVDALKNYE 406
Query: 1466 YTYW 1477
++
Sbjct: 407 IIFY 410
>ref|XP_610029.2| PREDICTED: solute carrier family 16, member 5 [Bos taurus].
Length = 466
Score = 214 bits (544), Expect = 2e-55
Identities = 126/401 (31%), Positives = 205/401 (51%), Gaps = 4/401 (0%)
Frame = +2
Query: 287 ISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRP 466
++ G + FP I +FF E++ F A+ SE SW SI+ A+++ GGP+ SILV ++G R
Sbjct: 22 VTQGLTLGFPTCIGIFFTELQREFQASNSETSWFPSILTAMLHAGGPLCSILVGRFGCRA 81
Query: 467 VMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLAN 646
M A SFC T+ +LYL G I GLG+ F+ ++T++G YF + + LAN
Sbjct: 82 TMMLGGVLASLGMVAGSFCRTLGQLYLTAGFITGLGMCFSFQSSITVLGLYFTRWQVLAN 141
Query: 647 GLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPIGPKPTTADK 826
LA AG + ++ L++ GWRG+FLI GG+LL+CCV GA++RP+ T
Sbjct: 142 ALASAGVSLGITLWPLLSRYLLEDLGWRGTFLIFGGVLLHCCVCGAVVRPVPASVT---- 197
Query: 827 YRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNKFLDLSLFKHR-GFLLY 1003
EA++G + G P + + + + L + + G+ +Y
Sbjct: 198 ------------PEAREGLPSPSKRPSRGCP----AACGRAIRRHLAFDVLRDNVGYRVY 241
Query: 1004 LSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVARPSMGLVANTKWIR 1183
G V M G P VFL Y +KAA L+S++ F ++ RP GLVA +
Sbjct: 242 TLGVVWMILGFPLPHVFLVPYAIRHGMDEQKAALLISVIGFSNIFLRPMAGLVAGRREFA 301
Query: 1184 PRVQYFFAASIIANGVCHLIAPLSSSY---IGFCIYAGFFGFAFGWLSSVLFETLMDLVG 1354
+Y F+ + + NG+ +L+ S+ + +G+C+ + + + ++LF+ LMD+V
Sbjct: 302 GHRKYLFSLAALLNGLTNLVCVASADFRVLVGYCL---AYSVSMSGIGALLFQVLMDIVP 358
Query: 1355 PQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTYW 1477
RFSSA+GL T++E + D D+ Y ++
Sbjct: 359 MDRFSSALGLFTVLESISILISPPLAGLLLDTTDDFSYVFY 399
>ref|XP_002696228.1| PREDICTED: solute carrier family 16, member 5 (monocarboxylic acid
transporter 6) [Bos taurus].
Length = 466
Score = 213 bits (542), Expect = 4e-55
Identities = 126/401 (31%), Positives = 204/401 (50%), Gaps = 4/401 (0%)
Frame = +2
Query: 287 ISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRP 466
++ G + FP I +FF E++ F A+ SE SW SI+ A+++ GGP+ SILV ++G R
Sbjct: 22 VTQGLTLGFPTCIGIFFTELQREFQASNSETSWFPSILTAMLHAGGPLCSILVGRFGCRA 81
Query: 467 VMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLAN 646
M A SFC T+ +LYL G I GLG+ F+ ++T++G YF + + LAN
Sbjct: 82 TMMLGGVLASLGMVAGSFCRTLGQLYLTAGFITGLGMCFSFQSSITVLGLYFTRWQVLAN 141
Query: 647 GLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPIGPKPTTADK 826
LA AG + ++ L++ GWRG+FLI GG+LL+CCV GA++RP+ T
Sbjct: 142 ALASAGVSLGITLWPLLSRYLLEDLGWRGTFLIFGGVLLHCCVCGAVVRPVPASVT---- 197
Query: 827 YRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNKFLDLSLFKHR-GFLLY 1003
EA++G + G P + + + + L + + G+ +Y
Sbjct: 198 ------------PEAREGLPSPSKRPSRGCP----AACGRAIRRHLAFDVLRDNVGYRVY 241
Query: 1004 LSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVARPSMGLVANTKWIR 1183
G V M G P VFL Y +KAA L+S++ F ++ RP GLVA +
Sbjct: 242 TLGVVWMILGFPLPHVFLVPYAIRHGMDEQKAALLISVIGFSNIFLRPMAGLVAGRREFA 301
Query: 1184 PRVQYFFAASIIANGVCHLIAPLSSSY---IGFCIYAGFFGFAFGWLSSVLFETLMDLVG 1354
+Y F+ + + NG+ +L+ S+ + +G+C+ + + + +LF+ LMD+V
Sbjct: 302 GHRKYLFSLAALLNGLTNLVCVASADFRVLVGYCL---AYSVSMSGIGXLLFQVLMDIVP 358
Query: 1355 PQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTYW 1477
RFSSA+GL T++E + D D+ Y ++
Sbjct: 359 MDRFSSALGLFTVLESISILISPPLAGLLLDTTDDFSYVFY 399
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 59,945,086
Number of extensions: 1488452
Number of successful extensions: 5436
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 5392
Number of HSP's successfully gapped: 31
Length of query: 548
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 441
Effective length of database: 14,140,958
Effective search space: 6236162478
Effective search space used: 6236162478
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009134
(1646 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_533065.2| PREDICTED: similar to Monocarboxylate transport... 764 0.0
Alignment gi|XP_862685.1| PREDICTED: similar to Monocarboxylate transport... 746 0.0
Alignment gi|XP_538259.1| PREDICTED: similar to Monocarboxylate transport... 497 e-140
Alignment gi|XP_544668.2| PREDICTED: similar to Monocarboxylate transport... 485 e-137
Alignment gi|XP_540498.2| PREDICTED: similar to Monocarboxylate transport... 322 9e-88
Alignment gi|XP_540427.2| PREDICTED: similar to solute carrier family 16,... 206 5e-53
Alignment gi|XP_543918.1| PREDICTED: similar to solute carrier family 16 ... 165 1e-40
Alignment gi|XP_548022.2| PREDICTED: similar to solute carrier family 16,... 162 1e-39
Alignment gi|XP_849442.1| PREDICTED: similar to solute carrier family 16 ... 159 6e-39
Alignment gi|XP_852708.1| PREDICTED: similar to solute carrier family 16,... 152 7e-37
>ref|XP_533065.2| PREDICTED: similar to Monocarboxylate transporter 1 (MCT 1) isoform 1
[Canis familiaris].
Length = 498
Score = 764 bits (1974), Expect = 0.0
Identities = 388/477 (81%), Positives = 403/477 (84%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPPAVGGPVGYTPPD FISIGFSYAFPKSITVFFKEIE IF+ATTSEVSW
Sbjct: 1 MPPAVGGPVGYTPPDGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIESIFSATTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMYGGGPISSILVNKYGSRP+M AASFCNTVQELYLCIGVIG
Sbjct: 61 ISSIMLAVMYGGGPISSILVNKYGSRPIMIVGGCLSGCGLIAASFCNTVQELYLCIGVIG 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGI+GWRGSFLI
Sbjct: 121 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIFGWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAGALMRPIGP PT+A K RSKESLQEAEKS+ KKG DANTDLIGGN K+
Sbjct: 181 LGGLLLNCCVAGALMRPIGPPPTSAGKDRSKESLQEAEKSDEKKGG-DANTDLIGGNRKE 239
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EK SVFQT+NKFLDLSLF HRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEK+AF
Sbjct: 240 EKGSVFQTINKFLDLSLFTHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKSAF 299
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASI+ANGVCHL+APLSSSYIGFC+YA
Sbjct: 300 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIVANGVCHLLAPLSSSYIGFCVYA 359
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPV NDIYGDYK
Sbjct: 360 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDIYGDYK 419
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLAXXXXXXXXXXXXXXXXXTSIDAAEKPKK 1636
YTYWAC MGINY+L+A TS+DAAEKPK+
Sbjct: 420 YTYWACGVILIIAGIYLFIGMGINYQLVAKEQKAEKQQKKESKEEETSVDAAEKPKE 476
>ref|XP_862685.1| PREDICTED: similar to Monocarboxylate transporter 1 (MCT 1) isoform 3
[Canis familiaris].
Length = 492
Score = 746 bits (1927), Expect = 0.0
Identities = 382/477 (80%), Positives = 397/477 (83%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPPAVGGPVGYTPPD FISIGFSYAFPKSITVFFKEIE IF+ATTSEVSW
Sbjct: 1 MPPAVGGPVGYTPPDGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIESIFSATTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMYGGGPISSILVNKYGSRP+M AASFCNTVQELYLC
Sbjct: 61 ISSIMLAVMYGGGPISSILVNKYGSRPIMIVGGCLSGCGLIAASFCNTVQELYLC----- 115
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
LGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGI+GWRGSFLI
Sbjct: 116 -LGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIFGWRGSFLI 174
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAGALMRPIGP PT+A K RSKESLQEAEKS+ KKG DANTDLIGGN K+
Sbjct: 175 LGGLLLNCCVAGALMRPIGPPPTSAGKDRSKESLQEAEKSDEKKGG-DANTDLIGGNRKE 233
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EK SVFQT+NKFLDLSLF HRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEK+AF
Sbjct: 234 EKGSVFQTINKFLDLSLFTHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKSAF 293
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASI+ANGVCHL+APLSSSYIGFC+YA
Sbjct: 294 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIVANGVCHLLAPLSSSYIGFCVYA 353
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPV NDIYGDYK
Sbjct: 354 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDIYGDYK 413
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLAXXXXXXXXXXXXXXXXXTSIDAAEKPKK 1636
YTYWAC MGINY+L+A TS+DAAEKPK+
Sbjct: 414 YTYWACGVILIIAGIYLFIGMGINYQLVAKEQKAEKQQKKESKEEETSVDAAEKPKE 470
>ref|XP_538259.1| PREDICTED: similar to Monocarboxylate transporter 2 (MCT 2) [Canis
familiaris].
Length = 483
Score = 497 bits (1280), Expect = e-140
Identities = 256/449 (57%), Positives = 312/449 (69%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPP VG P+ + PPD FISIGFSYAFPK++TVFFKEI+ IFN + SE++W
Sbjct: 1 MPPPVGAPL-HPPPDGGWGWVVVAASFISIGFSYAFPKAVTVFFKEIQQIFNTSYSEIAW 59
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMY GGPISS+LVNKYGSRPV+ ASF +V ELYL +G+I
Sbjct: 60 ISSIMLAVMYAGGPISSVLVNKYGSRPVVIVGGLLCCLGMVTASFSTSVIELYLTMGLIC 119
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNL PALT+IGKYFYK+RP+ANGLAMAGSPVFLSTLAP NQ F +GW+GSFLI
Sbjct: 120 GLGLAFNLQPALTIIGKYFYKKRPMANGLAMAGSPVFLSTLAPFNQYLFNTFGWKGSFLI 179
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGG+LLN CVAG+LMRP+ PK T + ++K ++ + S+ K +
Sbjct: 180 LGGILLNACVAGSLMRPVEPKQVTR-RSKNKIGIRVDDDSDVTK--------------RL 224
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
K+ ++ +NK+LD SLFKHRGFL+YLSGNV+MF G F P++FL+ Y K + AAF
Sbjct: 225 RKKPTWERINKYLDFSLFKHRGFLIYLSGNVIMFLGFFAPIIFLAPYAKDKGIDEYSAAF 284
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSI+AFVDM ARP+ G++AN++ IRPR+QYFF+ +I+ NGVCHL+ PL+ Y +YA
Sbjct: 285 LLSIMAFVDMFARPAGGVIANSRLIRPRIQYFFSFAIMFNGVCHLLCPLAEDYTSLVLYA 344
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
FFG FG +SSVLFE+LMDLVGPQRFSSAVGLVT+VECCPV D G YK
Sbjct: 345 IFFGLGFGSVSSVLFESLMDLVGPQRFSSAVGLVTVVECCPVLLGPPLAGKLVDETGQYK 404
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLA 1552
Y Y AC INYRLLA
Sbjct: 405 YMYIACGTIVFLSSVWLLIGNAINYRLLA 433
>ref|XP_544668.2| PREDICTED: similar to Monocarboxylate transporter 1 (MCT 1) [Canis
familiaris].
Length = 578
Score = 485 bits (1248), Expect = e-137
Identities = 242/328 (73%), Positives = 267/328 (81%)
Frame = +2
Query: 569 LGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLIL 748
L +A +LNPALT+IGKYFYKRRPLANG MAGSPVF STLAPLNQA F I+GWRGSFLIL
Sbjct: 227 LYIASHLNPALTIIGKYFYKRRPLANGPVMAGSPVFPSTLAPLNQALFDIFGWRGSFLIL 286
Query: 749 GGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKE 928
GGLLLNCCVAGALMRPIG PT+A K RSK SLQEA KS+ KKG D NTD G NPK+E
Sbjct: 287 GGLLLNCCVAGALMRPIGLPPTSAGKDRSKVSLQEAGKSDEKKGTGDTNTDFNGRNPKEE 346
Query: 929 KQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFL 1108
K VFQT+ K LDLSLF HRGFL YLSGNV+M FGL TPLVFL++Y KSQHYSSEK+AFL
Sbjct: 347 KPLVFQTVEKQLDLSLFSHRGFLQYLSGNVIMVFGLATPLVFLNSYAKSQHYSSEKSAFL 406
Query: 1109 LSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAG 1288
LSIL+F++++ARPSMGLVANTKWIRPRVQYFFAASI+A+GVCHL+APLSSSY GFC+Y G
Sbjct: 407 LSILSFLNIIARPSMGLVANTKWIRPRVQYFFAASIVASGVCHLLAPLSSSYTGFCVYVG 466
Query: 1289 FFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKY 1468
F GFAFGWLS VLFETLMDL+ QRFSSAVGL+TIVECCPV NDIY DYKY
Sbjct: 467 FLGFAFGWLSLVLFETLMDLIESQRFSSAVGLLTIVECCPVPLGPPLLGRLNDIYRDYKY 526
Query: 1469 TYWACXXXXXXXXXXXXXXMGINYRLLA 1552
YWAC MGINY+L+A
Sbjct: 527 AYWACGVILIIAGIYLFISMGINYQLVA 554
>ref|XP_540498.2| PREDICTED: similar to Monocarboxylate transporter 4 (MCT 4) (MCT 3)
[Canis familiaris].
Length = 470
Score = 322 bits (824), Expect = 9e-88
Identities = 173/397 (43%), Positives = 228/397 (57%), Gaps = 1/397 (0%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGIRAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELMREFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ +LYL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLMGGLLASLGMVAASFCRSIIQLYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFNKRRPMANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPI-GPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSV 940
NCCV ALMRP+ P P G P ++ S
Sbjct: 189 NCCVCAALMRPLEAPVP--------------------------------GSGPVPQRPS- 215
Query: 941 FQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSIL 1120
+ LDLS+F+ RGFL+Y +M GLF P VF+ +Y K +AAFLL++L
Sbjct: 216 ----RRLLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVSYAKDLGVPDTQAAFLLTVL 271
Query: 1121 AFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGF 1300
F+D+ ARP+ G + K +RP Y F+ S+ NG L +S Y G ++ FFG
Sbjct: 272 GFIDIFARPTAGFITGLKKVRPYSVYLFSFSMFFNGFTDLTGSTASDYGGLVVFCIFFGI 331
Query: 1301 AFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPV 1411
++G + ++ FE LM +VG Q+FSSA+GLV ++E V
Sbjct: 332 SYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAIAV 368
>ref|XP_540427.2| PREDICTED: similar to solute carrier family 16, member 5 [Canis
familiaris].
Length = 467
Score = 206 bits (524), Expect = 5e-53
Identities = 119/382 (31%), Positives = 195/382 (51%), Gaps = 11/382 (2%)
Frame = +2
Query: 287 ISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRP 466
++ G + FP +FF E++ F A+ SE SW SI+ A+++ GGP+ SILV ++G R
Sbjct: 22 VTQGLTLGFPTCTGIFFTELQHEFQASNSETSWFPSILTAMLHAGGPLCSILVGRFGCRV 81
Query: 467 VMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLAN 646
+ A+SFC T+ +LYL G I GLG+ F+ ++T++G YF + R LAN
Sbjct: 82 TVMLGGALASLGMVASSFCRTLSQLYLTAGFITGLGMCFSFQSSITVLGFYFSRHRALAN 141
Query: 647 GLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPIGPKPTTADK 826
LA G + ++ L++ GWRG+FL+ GG+ L+CCV GA++RP+
Sbjct: 142 ALASVGVSLGITLWPLLSRYLLEDLGWRGTFLVFGGVFLHCCVCGAILRPV--------- 192
Query: 827 YRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEK-------QSVFQTLNKFLDLSLFKH 985
A+ + I G P K + + + + L + +H
Sbjct: 193 ------------------ATSMAPETIEGPPPPSKTPAPGCLAACGRAIQRHLAFDILRH 234
Query: 986 R-GFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVARPSMGLV 1162
G+ ++ G + M G P VFL Y KAA L+SI+ F ++ RP GLV
Sbjct: 235 NAGYRVFTLGVMWMILGFPLPHVFLVPYAMRNGVDEHKAALLISIIGFSNIFLRPMAGLV 294
Query: 1163 ANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSY---IGFCIYAGFFGFAFGWLSSVLFE 1333
A + +Y F+ + + NG+ +L+ +S+ + +G+C+ + + + ++LF+
Sbjct: 295 AGRRDFAGHRKYLFSLAALLNGLTNLVCAVSADFRVLVGYCL---VYSVSMSGIGALLFQ 351
Query: 1334 TLMDLVGPQRFSSAVGLVTIVE 1399
LMD+V RFSSA+GL TI+E
Sbjct: 352 VLMDIVPMDRFSSALGLFTILE 373
>ref|XP_543918.1| PREDICTED: similar to solute carrier family 16 (monocarboxylic acid
transporters), member 12 [Canis familiaris].
Length = 490
Score = 165 bits (418), Expect = 1e-40
Identities = 124/423 (29%), Positives = 193/423 (45%), Gaps = 8/423 (1%)
Frame = +2
Query: 239 TPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYG 418
+PPD F+ + A + I++FF E + F ++ +WI SI+ V
Sbjct: 11 SPPDGGWGWMIVAGCFLVTICTRAVTRCISIFFVEFQSYFTQDYAQTAWIHSIVDCVTML 70
Query: 419 GGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPA 598
P+ S++ N + + SF +++ LYL +GV+ GLG A +PA
Sbjct: 71 CAPLGSVVSNHLSCQVGIMLGGLLASTGLILGSFATSLKHLYLTLGVLTGLGFALCYSPA 130
Query: 599 LTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVA 778
+ M+GKYF +R+ LA G+AM+GS + LAP+ Q + WRG+ LILGG +LN CV
Sbjct: 131 IAMVGKYFSRRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVLNLCVC 190
Query: 779 GALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNK 958
GALMRPI K + + EK + K+ L KK Q+
Sbjct: 191 GALMRPITLKEDQTTP--EQNHVCRTEKQDFKR------VSLCSTWTKKWGQTC------ 236
Query: 959 FLDLSLFKHRGFLLYLSGNVL------MFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSIL 1120
L SL + FLL VL M +G V+L Y S S ++AAFL+SIL
Sbjct: 237 -LCCSLQQEYSFLLMSDFVVLAISVLFMAYGCSPLFVYLVPYALSVGVSHQQAAFLMSIL 295
Query: 1121 AFVDMVARPSMGLVANTKWIR--PRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFF 1294
+D+V + G + + + ++ V Y FA + +G+C+L P+ S ++ F
Sbjct: 296 GVIDIVGNITFGWLTDRRCLKNYQYVCYLFAVGL--DGLCYLCLPMLQSLPLLVPFSCTF 353
Query: 1295 GFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
G+ G +++ ++VG SSA+G+V + P D G Y +
Sbjct: 354 GYFDGAYVTLIPVVTAEIVGTTSLSSALGVVYFLHAVPYLVSPPIAGWLVDTTGSYTAAF 413
Query: 1475 WAC 1483
C
Sbjct: 414 LLC 416
>ref|XP_548022.2| PREDICTED: similar to solute carrier family 16, member 6 [Canis
familiaris].
Length = 523
Score = 162 bits (409), Expect = 1e-39
Identities = 115/395 (29%), Positives = 180/395 (45%), Gaps = 28/395 (7%)
Frame = +2
Query: 299 FSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRPVMXX 478
F+Y KS VFF ++ F+ + S +SW+ SI + V+ P+S++L ++G R V+
Sbjct: 37 FTYGIIKSFGVFFNDLMDSFDESNSRISWVISICVFVLTFTAPLSAVLSTRFGHRLVVVA 96
Query: 479 XXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLANGLAM 658
ASF + +Y+ IG+I GLG F+ P +T++ +YF KRR + +A
Sbjct: 97 GGLLVSTGMVMASFSRELYHMYISIGIISGLGYCFSFLPTVTILSQYFDKRRSMVTAVAS 156
Query: 659 AGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPI------GPKPTTA 820
G + AP A GWR S L +G L LN V GAL+RPI PK T
Sbjct: 157 TGECFAMFAFAPAITALKDHIGWRYSLLFVGLLQLNIIVCGALLRPIIIRGPGSPKATAH 216
Query: 821 DKYRSKESLQEAEKSEAKKGASDANTDL------------IGGNPKKEKQSV-FQTLNK- 958
+ R + + E EK+ + D+ +L + PK + Q + +T +K
Sbjct: 217 EHRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSQANVELEPKADMQQIQVKTSSKP 276
Query: 959 ------FLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSIL 1120
LD S+ K + F+ Y + G F P +++ G S E+AAFLLS +
Sbjct: 277 SDKKAPLLDFSILKDKSFICYALFGLFATLGFFAPSLYIIPLGISLGIEQERAAFLLSAM 336
Query: 1121 AFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGF 1300
A ++ R G V N + IR Y +I V ++ + G + FFGF
Sbjct: 337 AIAEVFGRIGAGCVLNREPIRK--IYIELICVILLMVSLFAFTFATEFWGLMSCSIFFGF 394
Query: 1301 AFGWLSSVLFETLM--DLVGPQRFSSAVGLVTIVE 1399
G + L D+VG ++ SSA G+ ++
Sbjct: 395 MVGTVGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQ 429
>ref|XP_849442.1| PREDICTED: similar to solute carrier family 16 (monocarboxylic acid
transporters), member 13 [Canis familiaris].
Length = 425
Score = 159 bits (403), Expect = 6e-39
Identities = 119/411 (28%), Positives = 169/411 (41%)
Frame = +2
Query: 242 PPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGG 421
PPD F + +S VFF E+ F + VSWI+SI +AV G
Sbjct: 7 PPDGGWGWMVVLSAFFQSALVFGVLRSFGVFFVELVAAFEEQAARVSWIASIGIAVQQFG 66
Query: 422 GPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPAL 601
P+ S L KYG RPV+ AS T+ LYL IG++ G G A P L
Sbjct: 67 SPVGSALSTKYGPRPVVMAGGILAASGMLLASLATTLTHLYLSIGLLSGSGWALTFTPTL 126
Query: 602 TMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAG 781
+ +YF +RR LA GLA+ G + APL Q +Y WRG+ L++ L L+ G
Sbjct: 127 ACLSRYFSRRRSLATGLALTGVGLSSFAFAPLFQWLVSLYAWRGALLLVSALSLHLVACG 186
Query: 782 ALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNKF 961
AL+RP+ SL E D + G P +
Sbjct: 187 ALLRPL--------------SLME---------------DPVVGGPGAQL---------- 207
Query: 962 LDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVA 1141
SL H FL Y L+ G F P V L + + + AAFL+S++A D+V
Sbjct: 208 --TSLLHHGPFLRYTVALTLINTGYFIPYVHLIAHLQDLDWDPLSAAFLVSVVAISDLVG 265
Query: 1142 RPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFAFGWLSS 1321
R + G + + + V GV + P++ + A +GF G L+
Sbjct: 266 RVASGWLGDA--VPGPVARLLMLWTTLTGVSLALLPVAHTPTALMALAVAYGFTSGALTP 323
Query: 1322 VLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
V F L +LVG R +GLV +VE D+ G+Y ++
Sbjct: 324 VAFSVLPELVGTGRIYCGLGLVQMVESIGGLLGAPLSGYLRDVTGNYTASF 374
>ref|XP_852708.1| PREDICTED: similar to solute carrier family 16, member 8 [Canis
familiaris].
Length = 423
Score = 152 bits (385), Expect = 7e-37
Identities = 80/158 (50%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Frame = +2
Query: 221 GGPV-GYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSI 397
GGP G PPD F+ GF+Y FPK+++VFF+ + F A S+ +W+SSI
Sbjct: 4 GGPRRGEGPPDGGWGWAVLGACFVVTGFAYGFPKAVSVFFRALMRDFGAGYSDTAWVSSI 63
Query: 398 MLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGL 577
MLA++YG GP+SSILV ++G RPVM ASF + ELYL GV+ GLGL
Sbjct: 64 MLAMLYGTGPVSSILVTRFGCRPVMLVGGLLASAGMVLASFATRLLELYLTAGVLTGLGL 123
Query: 578 AFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLA 691
A N P+L M+G YF +RRPLANGLA AGSPVFLS A
Sbjct: 124 ALNFQPSLIMLGLYFERRRPLANGLAAAGSPVFLSDWA 161
Score = 95.5 bits (236), Expect = 1e-19
Identities = 50/121 (41%), Positives = 73/121 (60%)
Frame = +2
Query: 1049 VFLSNYGKSQHYSSEKAAFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANG 1228
VFLS++ K AAFLLS++ FVD+VARP+ G +A +RP V Y F+ +++ANG
Sbjct: 155 VFLSDWAKDAGVPDADAAFLLSVVGFVDIVARPACGALAGLARLRPHVAYLFSLALVANG 214
Query: 1229 VCHLIAPLSSSYIGFCIYAGFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCP 1408
+ L + + SY + FG ++G + ++ FE LM VG RF SA+GLV +VE
Sbjct: 215 LTDLSSARARSYGALVAFCVAFGLSYGMVGALQFEVLMAAVGSLRFPSALGLVLLVEAVA 274
Query: 1409 V 1411
V
Sbjct: 275 V 275
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 62,500,966
Number of extensions: 1528411
Number of successful extensions: 5612
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 5585
Number of HSP's successfully gapped: 22
Length of query: 548
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 440
Effective length of database: 15,274,216
Effective search space: 6720655040
Effective search space used: 6720655040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009134
(1646 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001121917.1| monocarboxylate transporter 1 [Sus scrofa]. 809 0.0
Alignment gi|XP_001928412.1| PREDICTED: monocarboxylate transporter 1-lik... 653 0.0
Alignment gi|XP_003126385.1| PREDICTED: monocarboxylate transporter 2 [Su... 503 e-142
Alignment gi|XP_003357973.1| PREDICTED: LOW QUALITY PROTEIN: monocarboxyl... 315 4e-86
Alignment gi|XP_003126076.1| PREDICTED: monocarboxylate transporter 3-lik... 308 4e-84
Alignment gi|XP_003126073.1| PREDICTED: monocarboxylate transporter 3-lik... 308 4e-84
Alignment gi|XP_003131280.1| PREDICTED: monocarboxylate transporter 6-lik... 209 5e-54
Alignment gi|XP_003131284.1| PREDICTED: monocarboxylate transporter 6-lik... 207 2e-53
Alignment gi|XP_001928846.2| PREDICTED: LOW QUALITY PROTEIN: monocarboxyl... 166 5e-41
Alignment gi|XP_003131974.1| PREDICTED: monocarboxylate transporter 13-li... 153 3e-37
>ref|NP_001121917.1| monocarboxylate transporter 1 [Sus scrofa].
Length = 501
Score = 809 bits (2089), Expect = 0.0
Identities = 412/478 (86%), Positives = 414/478 (86%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPPAVGGPVGYTPPD FISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW
Sbjct: 1 MPPAVGGPVGYTPPDGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMYGGGPISSILVNKYGSRPVM AASFCNTVQELYLCIGVIG
Sbjct: 61 ISSIMLAVMYGGGPISSILVNKYGSRPVMIIGGCLSGCGLIAASFCNTVQELYLCIGVIG 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI
Sbjct: 121 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK
Sbjct: 181 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 240
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF
Sbjct: 241 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 300
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA
Sbjct: 301 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 360
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPV NDIYGDYK
Sbjct: 361 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDIYGDYK 420
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLAXXXXXXXXXXXXXXXXXTSIDAAEKPKKL 1639
YTYWAC MGINYRLLA TSIDAAEKPK++
Sbjct: 421 YTYWACGIILIISGIYLFIGMGINYRLLAKEQKAEKQQIKENKEEETSIDAAEKPKEV 478
>ref|XP_001928412.1| PREDICTED: monocarboxylate transporter 1-like [Sus scrofa].
Length = 491
Score = 653 bits (1684), Expect = 0.0
Identities = 325/449 (72%), Positives = 361/449 (80%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPP+ GGP+GY PPD FISIGFS AF KSITVF+KEIE IF A++SEVSW
Sbjct: 1 MPPSNGGPLGYMPPDGGWGWAVVVGAFISIGFSCAFGKSITVFYKEIEEIFKASSSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
+SSI AVMY GGPISSILVNKYGSRPV+ AASFCNT+Q+LYLCIGVIG
Sbjct: 61 LSSIAFAVMYAGGPISSILVNKYGSRPVVIFGGCLSGCGLIAASFCNTMQQLYLCIGVIG 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFN NPALT+IGKYFYKRRPLANGLAMAGSPVFL LAPLNQA F +GWRGSFLI
Sbjct: 121 GLGLAFNFNPALTIIGKYFYKRRPLANGLAMAGSPVFLCALAPLNQALFATFGWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGG+LLNCCVAGALMRPIGPKP A K +SKESLQEA AK GA DAN ++ G NP K
Sbjct: 181 LGGILLNCCVAGALMRPIGPKPAGAGKEKSKESLQEAGTPNAKTGAGDANIEVNGLNPSK 240
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EKQSVFQT+N+ LDLSLFKHRGF+LYLSGNVLM F L TPLVFLSNY KSQH+SSEKAAF
Sbjct: 241 EKQSVFQTVNQLLDLSLFKHRGFMLYLSGNVLMSFVLATPLVFLSNYAKSQHHSSEKAAF 300
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARP+MGLVANTKW+RP +QYF+AASIIANGVCH++ PL++SY+GFC+YA
Sbjct: 301 LLSILAFVDMVARPTMGLVANTKWVRPGIQYFYAASIIANGVCHMLVPLATSYLGFCLYA 360
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
GF GFAFGW +VLFE+LMDL+G QRFSSAVGLVTIVEC P+ NDIYGDYK
Sbjct: 361 GFLGFAFGWFGAVLFESLMDLLGSQRFSSAVGLVTIVECGPILLGPPILGRLNDIYGDYK 420
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLA 1552
YTYWAC MGI++RL+A
Sbjct: 421 YTYWACGIILIISGIYLCIGMGIHFRLVA 449
>ref|XP_003126385.1| PREDICTED: monocarboxylate transporter 2 [Sus scrofa].
Length = 494
Score = 503 bits (1295), Expect = e-142
Identities = 262/448 (58%), Positives = 306/448 (68%)
Frame = +2
Query: 209 PPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWI 388
PPA G P + PPD FISIGFSYAFPK++TVFFKEI+ IFN T SE++WI
Sbjct: 3 PPAAGSPPPHPPPDGGWGWVVVGASFISIGFSYAFPKAVTVFFKEIQQIFNTTYSEIAWI 62
Query: 389 SSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGG 568
SSIMLAVMY GGPISS+LVNKYGSRPV+ ASF +V ELYL +G I G
Sbjct: 63 SSIMLAVMYAGGPISSVLVNKYGSRPVVMVGGLLCCLGMVTASFSTSVLELYLTMGFICG 122
Query: 569 LGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLIL 748
LGLAFNL PALT+IGKYFYK+RP+A GLAMAGSPVFLSTLAP NQ F YGWRGSFLIL
Sbjct: 123 LGLAFNLQPALTIIGKYFYKKRPIAIGLAMAGSPVFLSTLAPFNQFLFNSYGWRGSFLIL 182
Query: 749 GGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKE 928
GG+LLN CVAG+LMRP+GP+ T +KS+ K G L + E
Sbjct: 183 GGILLNACVAGSLMRPVGPQLT-------------PKKSKTKDGVRATEPHL---KKRHE 226
Query: 929 KQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFL 1108
K+S + +NK+LD SLFKHRGFL+YLSGNV+MF G F P++FL+ Y K + AAFL
Sbjct: 227 KKSTWVKINKYLDFSLFKHRGFLIYLSGNVIMFLGFFAPIIFLAPYAKDEGIDEYSAAFL 286
Query: 1109 LSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAG 1288
LSI+AFVDM ARP++G +AN++ IRPR+QYFF+ +I+ NGVCHL+ PL+ Y +YA
Sbjct: 287 LSIMAFVDMFARPTVGFIANSRIIRPRIQYFFSFAIMFNGVCHLLCPLADDYPSLVVYAI 346
Query: 1289 FFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKY 1468
FFG FG +SSVLFETLMDLVG QRFSSAVGLVTIVECCPV D G YKY
Sbjct: 347 FFGLGFGSVSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLAGTLVDKTGQYKY 406
Query: 1469 TYWACXXXXXXXXXXXXXXMGINYRLLA 1552
Y AC INYRLLA
Sbjct: 407 MYLACGAIVVISSVWLLIGNAINYRLLA 434
>ref|XP_003357973.1| PREDICTED: LOW QUALITY PROTEIN: monocarboxylate transporter 4 [Sus
scrofa].
Length = 458
Score = 315 bits (808), Expect = 4e-86
Identities = 172/417 (41%), Positives = 233/417 (55%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYA PK+++VFFKE+ F S+ +W+SSI+L
Sbjct: 9 GPTGIKAPDGGWGWAVLWGCFVITGFSYAXPKAVSVFFKELMREFGIGYSDTAWVSSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM +ASFC ++ +LYL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLAGGLLASLGMVSASFCGSIVQLYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFNKRRPMANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVF 943
NCCV ALMRP+ EA G G P++ +
Sbjct: 189 NCCVCAALMRPL----------------------EAPGGRQ-------GPGPQRPAR--- 216
Query: 944 QTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILA 1123
+ LDLS+F+ RGF++Y +M GLF P VF+ +Y K +AAFLL++L
Sbjct: 217 ----RLLDLSVFRDRGFVIYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTRAAFLLTVLG 272
Query: 1124 FVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFA 1303
F+D+ ARP+ G VA K +RP Y F+ ++ NG L + Y G ++ FFG +
Sbjct: 273 FIDIFARPTAGFVAGLKRVRPYSVYLFSFAMFFNGFTDLTGSTAGDYGGLVVFCIFFGIS 332
Query: 1304 FGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
+G + ++ FE LM +VG Q+FSSA+GLV ++E V D Y+Y +
Sbjct: 333 YGMVGALQFEVLMAIVGTQQFSSAIGLVLLLEAVAVLIGPPSGGKLLDATHVYQYVF 389
>ref|XP_003126076.1| PREDICTED: monocarboxylate transporter 3-like [Sus scrofa].
Length = 501
Score = 308 bits (790), Expect = 4e-84
Identities = 170/415 (40%), Positives = 235/415 (56%)
Frame = +2
Query: 233 GYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVM 412
G PPD F+ GF+Y FPK+++VFF+ + F A S+ +W+SSIMLA++
Sbjct: 9 GPGPPDGGWGWAVLGACFVITGFAYGFPKAVSVFFRALMRDFGAGYSDTAWVSSIMLAML 68
Query: 413 YGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLN 592
YG GP+SSILV ++G RPVM ASF + ELYL GV+ GLGLA N
Sbjct: 69 YGTGPVSSILVTRFGCRPVMLVGGLLASAGMILASFATRLLELYLTAGVLTGLGLALNFQ 128
Query: 593 PALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCC 772
P+L M+G YF +RRPLANGLA AGSPVFLS L+PL Q +GWRG FL+LGGLLL+CC
Sbjct: 129 PSLIMLGLYFERRRPLANGLAAAGSPVFLSALSPLGQLLLERFGWRGGFLLLGGLLLHCC 188
Query: 773 VAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTL 952
GA+MRP P +D ++S +A +A D G ++E S +
Sbjct: 189 ACGAVMRP----PPGSDPRPRRDSAGDA--------PGEAEADCEGLRLREEAPSGGRAR 236
Query: 953 NKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVD 1132
+ LD+++ R F +Y LM GLF P + L NY K +AAFLLSI+ FVD
Sbjct: 237 RRLLDVAVCTDRAFAVYAVTKFLMALGLFVPAILLVNYAKDAGVPDSEAAFLLSIVGFVD 296
Query: 1133 MVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFAFGW 1312
+VARP+ G +A +RP V Y F+ +++ANG+ L + + SY + FG ++G
Sbjct: 297 IVARPACGALAGLARLRPHVAYLFSLALMANGLTDLSSARARSYSALVAFCIAFGLSYGM 356
Query: 1313 LSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTYW 1477
+ ++ FE LM VG RF SA+GLV ++E V D +Y+ ++
Sbjct: 357 VGALQFEVLMAAVGAPRFPSALGLVLLLEAVAVLIGPPSAGRLVDALKNYEIIFY 411
>ref|XP_003126073.1| PREDICTED: monocarboxylate transporter 3-like [Sus scrofa].
Length = 501
Score = 308 bits (790), Expect = 4e-84
Identities = 170/415 (40%), Positives = 235/415 (56%)
Frame = +2
Query: 233 GYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVM 412
G PPD F+ GF+Y FPK+++VFF+ + F A S+ +W+SSIMLA++
Sbjct: 9 GPGPPDGGWGWAVLGACFVITGFAYGFPKAVSVFFRALMRDFGAGYSDTAWVSSIMLAML 68
Query: 413 YGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLN 592
YG GP+SSILV ++G RPVM ASF + ELYL GV+ GLGLA N
Sbjct: 69 YGTGPVSSILVTRFGCRPVMLVGGLLASAGMILASFATRLLELYLTAGVLTGLGLALNFQ 128
Query: 593 PALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCC 772
P+L M+G YF +RRPLANGLA AGSPVFLS L+PL Q +GWRG FL+LGGLLL+CC
Sbjct: 129 PSLIMLGLYFERRRPLANGLAAAGSPVFLSALSPLGQLLLERFGWRGGFLLLGGLLLHCC 188
Query: 773 VAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTL 952
GA+MRP P +D ++S +A +A D G ++E S +
Sbjct: 189 ACGAVMRP----PPGSDPRPRRDSAGDA--------PGEAEADCEGLRLREEAPSGGRAR 236
Query: 953 NKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVD 1132
+ LD+++ R F +Y LM GLF P + L NY K +AAFLLSI+ FVD
Sbjct: 237 RRLLDVAVCTDRAFAVYAVTKFLMALGLFVPAILLVNYAKDAGVPDSEAAFLLSIVGFVD 296
Query: 1133 MVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFAFGW 1312
+VARP+ G +A +RP V Y F+ +++ANG+ L + + SY + FG ++G
Sbjct: 297 IVARPACGALAGLARLRPHVAYLFSLALMANGLTDLSSARARSYSALVAFCIAFGLSYGM 356
Query: 1313 LSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTYW 1477
+ ++ FE LM VG RF SA+GLV ++E V D +Y+ ++
Sbjct: 357 VGALQFEVLMAAVGAPRFPSALGLVLLLEAVAVLIGPPSAGRLVDALKNYEIIFY 411
>ref|XP_003131280.1| PREDICTED: monocarboxylate transporter 6-like [Sus scrofa].
Length = 466
Score = 209 bits (531), Expect = 5e-54
Identities = 123/400 (30%), Positives = 198/400 (49%), Gaps = 3/400 (0%)
Frame = +2
Query: 287 ISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRP 466
+S G + FP I +FF E++ F A+ SE SW SI A+++ GGP+ SILV ++G R
Sbjct: 22 VSQGLTLGFPTCIGIFFTELQREFQASNSETSWFPSIQTAMLHAGGPLCSILVGRFGCRA 81
Query: 467 VMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLAN 646
M A SFC T+ +LYL G I GLG+ F+ ++T++G YF + + LAN
Sbjct: 82 TMMLGGVLASLGMVAGSFCRTLGQLYLTAGFITGLGMCFSFQSSITVLGLYFTRWQVLAN 141
Query: 647 GLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPIGPKPTTADK 826
LA G + ++ L++ GWRG+FLI GG+ L+CCV GA++RP+ T
Sbjct: 142 SLASTGVSLGITLWPLLSRYLLEDLGWRGTFLIFGGVFLHCCVCGAILRPVATSVT---- 197
Query: 827 YRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNKFLDLSLFKHRGFLLYL 1006
E + AN+ + ++ F L ++ G+ ++
Sbjct: 198 -------PETREGPTPPSKRPANSCRAACDRAIQRHLAFDVLR--------QNAGYRVFT 242
Query: 1007 SGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVARPSMGLVANTKWIRP 1186
G V M G P VFL Y +AA L+SI+ F ++ RP GLVA +
Sbjct: 243 LGVVWMIMGFPLPHVFLVPYAIRHGLDEHRAALLISIIGFSNIFLRPLAGLVAGRQVFAG 302
Query: 1187 RVQYFFAASIIANGVCHLIAPLSSSY---IGFCIYAGFFGFAFGWLSSVLFETLMDLVGP 1357
+Y F+ + + NG+ +L+ S+ + +G+C+ + + + ++LF+ LMD+V
Sbjct: 303 HRKYLFSLAALLNGLTNLVCAASADFRVLVGYCL---VYSVSMSGIGALLFQVLMDIVPM 359
Query: 1358 QRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTYW 1477
RFSSA+GL TI+E + D ++ Y ++
Sbjct: 360 DRFSSALGLFTILESISILISPPLAGLLLDTTTNFSYVFY 399
>ref|XP_003131284.1| PREDICTED: monocarboxylate transporter 6-like [Sus scrofa].
Length = 466
Score = 207 bits (526), Expect = 2e-53
Identities = 123/400 (30%), Positives = 197/400 (49%), Gaps = 3/400 (0%)
Frame = +2
Query: 287 ISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRP 466
+S G + FP I +FF E++ F A+ SE SW SI A+++ GGP+ SILV +G R
Sbjct: 22 VSQGLTLGFPTCIGIFFTELQREFQASNSETSWFPSIQTAMLHAGGPLCSILVGCFGCRA 81
Query: 467 VMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLAN 646
M A SFC T+ +LYL G I GLG+ F+ ++T++G YF + + LAN
Sbjct: 82 TMMLGGVLASLGMVAGSFCRTLGQLYLTAGFITGLGMCFSFQSSITVLGLYFTRWQVLAN 141
Query: 647 GLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPIGPKPTTADK 826
LA G + ++ L++ GWRG+FLI GG+ L+CCV GA++RP+ T
Sbjct: 142 SLASTGVSLGITLWPLLSRYLLEDLGWRGTFLIFGGVFLHCCVCGAILRPVATSVT---- 197
Query: 827 YRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNKFLDLSLFKHRGFLLYL 1006
E + AN+ + ++ F L ++ G+ ++
Sbjct: 198 -------PETREGPTPPSKRPANSCRAACDRAIQRHLAFDVLR--------QNAGYRVFT 242
Query: 1007 SGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVARPSMGLVANTKWIRP 1186
G V M G P VFL Y +AA L+SI+ F ++ RP GLVA +
Sbjct: 243 LGVVWMIMGFPLPHVFLVPYAIRHGLDEHRAALLISIIGFSNIFLRPLAGLVAGRQVFAG 302
Query: 1187 RVQYFFAASIIANGVCHLIAPLSSSY---IGFCIYAGFFGFAFGWLSSVLFETLMDLVGP 1357
+Y F+ + + NG+ +L+ S+ + +G+C+ + + + ++LF+ LMD+V
Sbjct: 303 HRKYLFSLAALLNGLTNLVCAASADFRVLVGYCL---VYSVSMSGIGALLFQVLMDIVPM 359
Query: 1358 QRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTYW 1477
RFSSA+GL TI+E + D ++ Y ++
Sbjct: 360 DRFSSALGLFTILESISILISPPLAGLLLDTTTNFSYVFY 399
>ref|XP_001928846.2| PREDICTED: LOW QUALITY PROTEIN: monocarboxylate transporter 12 [Sus
scrofa].
Length = 518
Score = 166 bits (419), Expect = 5e-41
Identities = 119/421 (28%), Positives = 193/421 (45%), Gaps = 6/421 (1%)
Frame = +2
Query: 239 TPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYG 418
+PPD F+ + A + I++FF E + F+ ++ +WI SI+ V
Sbjct: 43 SPPDGGWGWMIVAGCFLVTICTRAVTRCISIFFVEFQTYFSQDYAQTAWIHSIVDCVTML 102
Query: 419 GGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPA 598
P+ S++ N + + SF +++ LYL +GV+ GLG A +PA
Sbjct: 103 CAPLGSVVSNHLSCQVGIMLGGLLASTGLILGSFATSLKHLYLTLGVLTGLGFALCYSPA 162
Query: 599 LTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVA 778
+ M+GKYF +R+ LA G++M+GS + + LAP+ Q + WRG+ LILGG +LN CV
Sbjct: 163 IAMVGKYFNRRKALAYGISMSGSGIGIFILAPVVQLLIEQFSWRGALLILGGFVLNLCVC 222
Query: 779 GALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK--EKQSVFQTL 952
GALMRPI K ++ E DL G+P K+ V L
Sbjct: 223 GALMRPITLK-------------EDRSTPEQNHVCRTQTQDLKQGSPCSTWTKKWVHTCL 269
Query: 953 NKFL--DLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAF 1126
L + S F++ + M +G V+L Y S S ++AAFL+SIL
Sbjct: 270 CGSLQQEYSFLLMSDFVVLAISVLFMAYGCSPLFVYLVPYALSVGVSHQQAAFLMSILGV 329
Query: 1127 VDMVARPSMGLVANTKWIR--PRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGF 1300
+D++ + G + + + ++ V Y FA + +G+C+L P+ S +A FG+
Sbjct: 330 IDIIGNITFGWLTDRRCLKNYQYVCYLFAVGL--DGLCYLCLPMLQSLPLLVPFACTFGY 387
Query: 1301 AFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTYWA 1480
G +++ ++VG SSA+G+V + P D G Y +
Sbjct: 388 FDGAYVTLIPVVTAEIVGTTSLSSALGVVYFLHAVPYLVSPPIAGWLVDTTGSYTAAFLL 447
Query: 1481 C 1483
C
Sbjct: 448 C 448
>ref|XP_003131974.1| PREDICTED: monocarboxylate transporter 13-like [Sus scrofa].
Length = 420
Score = 153 bits (386), Expect = 3e-37
Identities = 117/411 (28%), Positives = 166/411 (40%)
Frame = +2
Query: 242 PPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGG 421
PPD F + +S VFF E F + VSWI+SI +AV G
Sbjct: 7 PPDGGWGWMVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVSWIASIGIAVQQFG 66
Query: 422 GPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPAL 601
P+ S L K+G RPV+ ASF ++ LYL IG++ G G A P L
Sbjct: 67 SPVGSALSTKFGPRPVVMAGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFTPTL 126
Query: 602 TMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAG 781
+ +YF +RR LA GLA+ G + APL Q Y WRG+ L++ L L+ G
Sbjct: 127 ACLSRYFSRRRSLATGLALTGVGLSSFAFAPLFQWLLSHYAWRGALLLVSALSLHLVACG 186
Query: 782 ALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNKF 961
AL+RP+ SL E D G P +
Sbjct: 187 ALLRPL--------------SLAE---------------DPAVGGPGAQL---------- 207
Query: 962 LDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVA 1141
L H FL Y L+ G F P V L + + + + AAFLLS+ A D+V
Sbjct: 208 --TCLLHHGPFLRYTVALTLINTGYFIPYVHLVAHLRDLDWDALPAAFLLSVAAISDLVG 265
Query: 1142 RPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFAFGWLSS 1321
R + G + + + V GV + P++ + + +GF G L+
Sbjct: 266 RVASGCLGDA--VPGPVARLLMLWTTLTGVILALFPVAQAPTALVALSVAYGFTSGALTP 323
Query: 1322 VLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
V F L +LVG R +GLV +VE D+ G+Y ++
Sbjct: 324 VAFSVLPELVGTGRIYCGLGLVQMVESIGGLLGAPLSGYLRDVTGNYTASF 374
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 38,579,924
Number of extensions: 954548
Number of successful extensions: 3550
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 3532
Number of HSP's successfully gapped: 25
Length of query: 548
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 444
Effective length of database: 8,754,644
Effective search space: 3887061936
Effective search space used: 3887061936
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009134
(1646 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033222.1| monocarboxylate transporter 1 [Mus musculus]. 714 0.0
Alignment gi|NP_035521.1| monocarboxylate transporter 2 [Mus musculus]. 478 e-135
Alignment gi|NP_001033743.1| monocarboxylate transporter 4 [Mus musculus]. 322 5e-88
Alignment gi|NP_001033742.1| monocarboxylate transporter 4 [Mus musculus]. 322 5e-88
Alignment gi|NP_109621.1| monocarboxylate transporter 4 [Mus musculus]. 322 5e-88
Alignment gi|NP_065262.1| monocarboxylate transporter 3 [Mus musculus]. 302 6e-82
Alignment gi|NP_001074403.1| monocarboxylate transporter 6 [Mus musculus]. 197 2e-50
Alignment gi|NP_766426.1| monocarboxylate transporter 12 [Mus musculus]. 166 4e-41
Alignment gi|NP_001025013.1| monocarboxylate transporter 7 isoform a [Mus... 162 7e-40
Alignment gi|NP_598799.1| monocarboxylate transporter 7 isoform b [Mus mu... 162 7e-40
>ref|NP_033222.1| monocarboxylate transporter 1 [Mus musculus].
Length = 493
Score = 714 bits (1842), Expect = 0.0
Identities = 360/479 (75%), Positives = 387/479 (80%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPPA+GGPVGYTPPD FISIGFSYAFPKSITVFFKEIE IF+ATTSEVSW
Sbjct: 1 MPPAIGGPVGYTPPDGGWGWAVLVGAFISIGFSYAFPKSITVFFKEIEVIFSATTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMY GGPISSILVNKYGSRPVM AASFCNTVQELYLCIGVIG
Sbjct: 61 ISSIMLAVMYAGGPISSILVNKYGSRPVMIAGGCLSGCGLIAASFCNTVQELYLCIGVIG 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNLNPALTMIGKYFYK+RPLANGLAMAGSPVFLSTLAPLNQAFF I+ WRGSFLI
Sbjct: 121 GLGLAFNLNPALTMIGKYFYKKRPLANGLAMAGSPVFLSTLAPLNQAFFDIFDWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAG+LMRPIGP+ +K +SKESLQEA G SDANTDLIGG+PK
Sbjct: 181 LGGLLLNCCVAGSLMRPIGPEQVKLEKLKSKESLQEA-------GKSDANTDLIGGSPKG 233
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EK SVFQT+NKFLDLSLF HRGFLLYLSGNV+MFFGLFTPLVFLS+YGKS+ +SSEK+AF
Sbjct: 234 EKLSVFQTINKFLDLSLFTHRGFLLYLSGNVVMFFGLFTPLVFLSSYGKSKDFSSEKSAF 293
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARPSMGL ANTKWIRPR+QYFFAAS++ANGVCHL+APLS++Y+GFC+YA
Sbjct: 294 LLSILAFVDMVARPSMGLAANTKWIRPRIQYFFAASVVANGVCHLLAPLSTTYVGFCVYA 353
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
G FGFAFGWLSSVLFETLMDL+GPQRFSSAVGLVTIVECCPV ND+YGDYK
Sbjct: 354 GVFGFAFGWLSSVLFETLMDLIGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDMYGDYK 413
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLAXXXXXXXXXXXXXXXXXTSIDAAEKPKKLL 1642
YTYWAC MGINYRLLA S D EKPK+ +
Sbjct: 414 YTYWACGVILIIAGIYLFIGMGINYRLLAKEQKAEEKQKREGKEDEASTDVDEKPKETM 472
>ref|NP_035521.1| monocarboxylate transporter 2 [Mus musculus].
Length = 484
Score = 478 bits (1230), Expect = e-135
Identities = 244/436 (55%), Positives = 297/436 (68%)
Frame = +2
Query: 242 PPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGG 421
PPD FISIGFSYAFPK++TVFFK+I+ IFN T+S+++WISSIMLAVMY G
Sbjct: 14 PPDGGWGWVVVCASFISIGFSYAFPKAVTVFFKDIQEIFNTTSSQIAWISSIMLAVMYAG 73
Query: 422 GPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPAL 601
GPISS+LVN YGSRPV+ AS+ N+V ELYL +G IGGLGLAFNL PAL
Sbjct: 74 GPISSVLVNNYGSRPVVIVGGLLCCIGMILASYSNSVIELYLTVGFIGGLGLAFNLQPAL 133
Query: 602 TMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAG 781
T+IGKYFY+RRPLANG AMAGSPVFLSTLAP NQ F YGW+GSFLILGG+ L+ CVAG
Sbjct: 134 TIIGKYFYRRRPLANGCAMAGSPVFLSTLAPFNQYLFNNYGWKGSFLILGGIFLHSCVAG 193
Query: 782 ALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNKF 961
LMRP+GP P T +KS++K G+ +T K K S Q +N+F
Sbjct: 194 CLMRPVGPSPNT-------------KKSKSKVGSRHDST-----LKKASKVSTAQKVNRF 235
Query: 962 LDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVA 1141
LD SLF HRGFL+YLSGNV++F G+F P++FL+ Y K +AFLLS++AF+DM A
Sbjct: 236 LDFSLFMHRGFLIYLSGNVILFLGIFAPIIFLAQYAKHIGVDDYNSAFLLSVMAFIDMFA 295
Query: 1142 RPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFAFGWLSS 1321
RPS+GL+ANT IRPR+QY F+++II G+CHL+ PL+++Y +Y FFG FG +SS
Sbjct: 296 RPSVGLIANTSLIRPRIQYLFSSAIIFTGICHLLCPLATTYSALVVYVVFFGLGFGSISS 355
Query: 1322 VLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTYWACXXXXXX 1501
+LFE LMD+VG RFSSAVGL TIVECCPV DI G+YKY Y A
Sbjct: 356 LLFECLMDIVGATRFSSAVGLTTIVECCPVLFGPPLAGKLLDITGEYKYLYIASGTVVLV 415
Query: 1502 XXXXXXXXMGINYRLL 1549
INYRLL
Sbjct: 416 SGTYLLIGNAINYRLL 431
>ref|NP_001033743.1| monocarboxylate transporter 4 [Mus musculus].
Length = 470
Score = 322 bits (825), Expect = 5e-88
Identities = 176/418 (42%), Positives = 234/418 (55%), Gaps = 1/418 (0%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD FI GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGIKAPDGGWGWAVLFGCFIITGFSYAFPKAVSVFFKELMHEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFNKRRPIANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRP-IGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSV 940
NCCV ALMRP + P+ +GG E +
Sbjct: 189 NCCVCAALMRPLVAPQ--------------------------------VGGG--TEPRGP 214
Query: 941 FQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSIL 1120
+ + LDLS+F+ RGFL+Y +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 215 QRPPQRLLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVSYAKDMGVPDTKAAFLLTIL 274
Query: 1121 AFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGF 1300
F+D+ ARP+ G + K +RP Y F+ ++ NG L ++ Y G ++ FFG
Sbjct: 275 GFIDIFARPTAGFITGLKKVRPYSVYLFSFAMFFNGFTDLTGSTATDYGGLVVFCIFFGI 334
Query: 1301 AFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
++G + ++ FE LM +VG Q+FSSA+GLV ++E V D YKY +
Sbjct: 335 SYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAVLIGPPSGGKLLDATKVYKYVF 392
>ref|NP_001033742.1| monocarboxylate transporter 4 [Mus musculus].
Length = 470
Score = 322 bits (825), Expect = 5e-88
Identities = 176/418 (42%), Positives = 234/418 (55%), Gaps = 1/418 (0%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD FI GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGIKAPDGGWGWAVLFGCFIITGFSYAFPKAVSVFFKELMHEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFNKRRPIANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRP-IGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSV 940
NCCV ALMRP + P+ +GG E +
Sbjct: 189 NCCVCAALMRPLVAPQ--------------------------------VGGG--TEPRGP 214
Query: 941 FQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSIL 1120
+ + LDLS+F+ RGFL+Y +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 215 QRPPQRLLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVSYAKDMGVPDTKAAFLLTIL 274
Query: 1121 AFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGF 1300
F+D+ ARP+ G + K +RP Y F+ ++ NG L ++ Y G ++ FFG
Sbjct: 275 GFIDIFARPTAGFITGLKKVRPYSVYLFSFAMFFNGFTDLTGSTATDYGGLVVFCIFFGI 334
Query: 1301 AFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
++G + ++ FE LM +VG Q+FSSA+GLV ++E V D YKY +
Sbjct: 335 SYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAVLIGPPSGGKLLDATKVYKYVF 392
>ref|NP_109621.1| monocarboxylate transporter 4 [Mus musculus].
Length = 470
Score = 322 bits (825), Expect = 5e-88
Identities = 176/418 (42%), Positives = 234/418 (55%), Gaps = 1/418 (0%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD FI GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGIKAPDGGWGWAVLFGCFIITGFSYAFPKAVSVFFKELMHEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFNKRRPIANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRP-IGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSV 940
NCCV ALMRP + P+ +GG E +
Sbjct: 189 NCCVCAALMRPLVAPQ--------------------------------VGGG--TEPRGP 214
Query: 941 FQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSIL 1120
+ + LDLS+F+ RGFL+Y +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 215 QRPPQRLLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVSYAKDMGVPDTKAAFLLTIL 274
Query: 1121 AFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGF 1300
F+D+ ARP+ G + K +RP Y F+ ++ NG L ++ Y G ++ FFG
Sbjct: 275 GFIDIFARPTAGFITGLKKVRPYSVYLFSFAMFFNGFTDLTGSTATDYGGLVVFCIFFGI 334
Query: 1301 AFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
++G + ++ FE LM +VG Q+FSSA+GLV ++E V D YKY +
Sbjct: 335 SYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAVLIGPPSGGKLLDATKVYKYVF 392
>ref|NP_065262.1| monocarboxylate transporter 3 [Mus musculus].
Length = 492
Score = 302 bits (773), Expect = 6e-82
Identities = 173/423 (40%), Positives = 235/423 (55%), Gaps = 4/423 (0%)
Frame = +2
Query: 221 GGPV-GYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSI 397
GGP G PPD F+ GF+Y FPK+++VFF+E++ F A S+ +W+SSI
Sbjct: 4 GGPRRGAGPPDGGWGWVVLGACFVVTGFAYGFPKAVSVFFRELKRDFGAGYSDTAWVSSI 63
Query: 398 MLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGL 577
MLA++YG GP+SSILV ++G RPVM ASF + + ELYL GV+ GLGL
Sbjct: 64 MLAMLYGTGPLSSILVTRFGCRPVMLAGGLLASAGMILASFASRLVELYLTAGVLTGLGL 123
Query: 578 AFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGL 757
A N P+L M+G YF +RRPLANGLA AGSPVFLS L+PL Q +GWRG FL+ GGL
Sbjct: 124 ALNFQPSLIMLGLYFERRRPLANGLAAAGSPVFLSMLSPLGQLLGERFGWRGGFLLFGGL 183
Query: 758 LLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQS 937
LL+CC GA+MRP P D G P + +
Sbjct: 184 LLHCCACGAVMRPPPGPPPRRDPSPH-------------------------GGPARRR-- 216
Query: 938 VFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSI 1117
+ LD+++ R F++Y+ LM GLF P + L NY K +AAFLLSI
Sbjct: 217 ------RLLDVAVCTDRAFVVYVVTKFLMALGLFVPAILLVNYAKDAGVPDAEAAFLLSI 270
Query: 1118 LAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSY---IGFCIYAG 1288
+ FVD+VARP+ G +A +RP V Y F+ +++ANG+ LI+ + SY + FCI
Sbjct: 271 VGFVDIVARPACGALAGLGRLRPHVPYLFSLALLANGLTDLISARARSYGTLVAFCI--- 327
Query: 1289 FFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKY 1468
FG ++G + ++ FE LM VG RF SA+GLV +VE V D +Y+
Sbjct: 328 AFGLSYGMVGALQFEVLMATVGAPRFPSALGLVLLVEAVAVLIGPPSAGRLVDALKNYEI 387
Query: 1469 TYW 1477
++
Sbjct: 388 IFY 390
>ref|NP_001074403.1| monocarboxylate transporter 6 [Mus musculus].
Length = 468
Score = 197 bits (502), Expect = 2e-50
Identities = 122/375 (32%), Positives = 193/375 (51%), Gaps = 5/375 (1%)
Frame = +2
Query: 287 ISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRP 466
++ + FP I VFF +++ F A+ SE SW SI+ A+++GGGP+ SILV +G R
Sbjct: 22 VTQALTLGFPTCIGVFFTDLQRDFQASNSETSWFPSILGAMVHGGGPLCSILVKHFGCRV 81
Query: 467 VMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLAN 646
M ++F ++ L+L GVI GLG+ F+ ++T++G YF +RRPLAN
Sbjct: 82 TMMLGGVLASLGMVVSTFSGSLTHLFLTAGVITGLGMCFSFQSSITVVGLYFVRRRPLAN 141
Query: 647 GLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPIGPKPTTADK 826
LA G + ++ L + GWRG+FLI GG+LL+CCV GAL+RP+ T +
Sbjct: 142 ALASMGLSMGVTLWPLLARYLLETLGWRGAFLIFGGILLHCCVCGALLRPV----ATNEV 197
Query: 827 YRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTLNKFLDLSLFKHR-GFLLY 1003
KE K + + + T+ L + +H GF +Y
Sbjct: 198 PEPKEDPLLPPKIPTRSCLA----------------TCVSTIRYHLAFDILRHNMGFCIY 241
Query: 1004 LSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILAFVDMVARPSMG-LVANTKWI 1180
++G M G P +FL Y AA L+SI+ F ++ RP G L+A K +
Sbjct: 242 VTGVTWMNLGFALPHIFLVPYAMHHGVDDYWAAMLMSIVGFCNIFLRPMAGLLLAGRKSL 301
Query: 1181 RPRVQYFFAASIIANGVCHLIAPLSSSY---IGFCIYAGFFGFAFGWLSSVLFETLMDLV 1351
+Y FA +I+ NG+ +LI +S+ + +G+C+ + + + ++F+ LMD+V
Sbjct: 302 AAYRKYLFAVAILINGLTNLICTVSADFRVLLGYCL---VYSLSMCGVGILVFQVLMDIV 358
Query: 1352 GPQRFSSAVGLVTIV 1396
RF SA+GL TI+
Sbjct: 359 PMDRFPSALGLFTIL 373
>ref|NP_766426.1| monocarboxylate transporter 12 [Mus musculus].
Length = 486
Score = 166 bits (421), Expect = 4e-41
Identities = 121/428 (28%), Positives = 196/428 (45%), Gaps = 13/428 (3%)
Frame = +2
Query: 239 TPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYG 418
+PPD F+ + A + I++FF E + F S+ +WI SI+ +
Sbjct: 11 SPPDGGWGWMIVAGCFLVTICTRAVTRCISIFFVEFQTYFAQDYSQTAWIHSIVDCMTML 70
Query: 419 GGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPA 598
P+ S++ N+ + + SF +++ LYL +GV+ GLG A +PA
Sbjct: 71 CAPLGSVVSNQLSCQAGIMLGGLLASTGFILGSFATSLKHLYLSLGVLTGLGFALCYSPA 130
Query: 599 LTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVA 778
+ M+GKYF +R+ LA G+AM+GS + LAP+ Q + WRG+ LILGG +LN CV
Sbjct: 131 IAMVGKYFSRRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVLNLCVC 190
Query: 779 GALMRPIGPKP--TTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVFQTL 952
GALMRPI K + +K ++ES +E K + S + L
Sbjct: 191 GALMRPITLKEDRSVPEKNHNRESQREDCK----------------------QASPYSPL 228
Query: 953 NK-----FLDLSLFKHRGFLLYLSGNVL------MFFGLFTPLVFLSNYGKSQHYSSEKA 1099
K L SL + GFLL VL M +G V+L Y S S +A
Sbjct: 229 TKECTETRLCCSLQQEYGFLLMSDFVVLAVSVLFMAYGCSPLFVYLVPYALSVGVSHHQA 288
Query: 1100 AFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCI 1279
AFL+SIL +D+V + G + + + ++ + ++ +G+C+L P+ ++
Sbjct: 289 AFLMSILGVIDIVGNITFGWLTDRRCLKNYRYVCYLFAVALDGLCYLCLPMLQTFPLLVP 348
Query: 1280 YAGFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGD 1459
++ FG+ G +++ ++VG SSA+G+V + P D G
Sbjct: 349 FSCTFGYFDGAYVTLIPVVTAEIVGTTSLSSALGVVYFLHAVPYLVSPPIAGWLVDTTGS 408
Query: 1460 YKYTYWAC 1483
Y + C
Sbjct: 409 YTAAFLLC 416
>ref|NP_001025013.1| monocarboxylate transporter 7 isoform a [Mus musculus].
Length = 607
Score = 162 bits (410), Expect = 7e-40
Identities = 115/395 (29%), Positives = 178/395 (45%), Gaps = 28/395 (7%)
Frame = +2
Query: 299 FSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRPVMXX 478
F+Y KS VFF ++ F+ + S++SWI SI + V+ P+S++L N++G R V+
Sbjct: 121 FTYGIIKSFGVFFNDLMDSFDESNSKISWIISICVFVLTFTAPLSTVLSNRFGHRLVVMA 180
Query: 479 XXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLANGLAM 658
ASF V +Y+ IGVI GLG F+ P +T++ +YF KRR + +A
Sbjct: 181 GGLLISLGMITASFSQRVYHMYISIGVISGLGYCFSFLPTVTILSQYFDKRRSVVTAVAS 240
Query: 659 AGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPI-------GPKPTT 817
G + AP A GWR S L +G L LN V GAL+RPI PK T
Sbjct: 241 TGECFAVFAFAPAITALKEHIGWRYSLLFVGLLQLNIMVCGALLRPIIIQGPGQSPKAVT 300
Query: 818 ADKYRSKESLQEAEKSEAKKGASDANTDL------------IGGNPKKEKQSVFQTLNK- 958
+ R + + E EK+ + D+ +L + + E+Q T K
Sbjct: 301 LEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKMEQETRAEQQQTLVTAPKH 360
Query: 959 ------FLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSIL 1120
LD S+ K + F+ Y + G F P +++ G S ++AAFLLS +
Sbjct: 361 SQMKAPLLDFSVLKEKSFICYALFGLFATLGFFAPSLYIIPLGISLGIDPDRAAFLLSTM 420
Query: 1121 AFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGF 1300
A ++ R G V N + IR Y +I ++ + G + + FFG
Sbjct: 421 AIAEVFGRIGAGFVLNREPIRK--IYIELICVILLTASLFAFTFATEFWGLMLCSVFFGS 478
Query: 1301 AFGWLSSVLFETLM--DLVGPQRFSSAVGLVTIVE 1399
G + L D+VG ++ SSA G+ ++
Sbjct: 479 MVGTIGGTHIPMLAEDDVVGIEKMSSAAGVYVFIQ 513
>ref|NP_598799.1| monocarboxylate transporter 7 isoform b [Mus musculus].
Length = 523
Score = 162 bits (410), Expect = 7e-40
Identities = 115/395 (29%), Positives = 178/395 (45%), Gaps = 28/395 (7%)
Frame = +2
Query: 299 FSYAFPKSITVFFKEIEGIFNATTSEVSWISSIMLAVMYGGGPISSILVNKYGSRPVMXX 478
F+Y KS VFF ++ F+ + S++SWI SI + V+ P+S++L N++G R V+
Sbjct: 37 FTYGIIKSFGVFFNDLMDSFDESNSKISWIISICVFVLTFTAPLSTVLSNRFGHRLVVMA 96
Query: 479 XXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYFYKRRPLANGLAM 658
ASF V +Y+ IGVI GLG F+ P +T++ +YF KRR + +A
Sbjct: 97 GGLLISLGMITASFSQRVYHMYISIGVISGLGYCFSFLPTVTILSQYFDKRRSVVTAVAS 156
Query: 659 AGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLLNCCVAGALMRPI-------GPKPTT 817
G + AP A GWR S L +G L LN V GAL+RPI PK T
Sbjct: 157 TGECFAVFAFAPAITALKEHIGWRYSLLFVGLLQLNIMVCGALLRPIIIQGPGQSPKAVT 216
Query: 818 ADKYRSKESLQEAEKSEAKKGASDANTDL------------IGGNPKKEKQSVFQTLNK- 958
+ R + + E EK+ + D+ +L + + E+Q T K
Sbjct: 217 LEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKMEQETRAEQQQTLVTAPKH 276
Query: 959 ------FLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSIL 1120
LD S+ K + F+ Y + G F P +++ G S ++AAFLLS +
Sbjct: 277 SQMKAPLLDFSVLKEKSFICYALFGLFATLGFFAPSLYIIPLGISLGIDPDRAAFLLSTM 336
Query: 1121 AFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGF 1300
A ++ R G V N + IR Y +I ++ + G + + FFG
Sbjct: 337 AIAEVFGRIGAGFVLNREPIRK--IYIELICVILLTASLFAFTFATEFWGLMLCSVFFGS 394
Query: 1301 AFGWLSSVLFETLM--DLVGPQRFSSAVGLVTIVE 1399
G + L D+VG ++ SSA G+ ++
Sbjct: 395 MVGTIGGTHIPMLAEDDVVGIEKMSSAAGVYVFIQ 429
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 52,323,999
Number of extensions: 1290401
Number of successful extensions: 4705
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 4674
Number of HSP's successfully gapped: 26
Length of query: 548
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 442
Effective length of database: 12,433,743
Effective search space: 5495714406
Effective search space used: 5495714406
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009134
(1646 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_003042.3| monocarboxylate transporter 1 [Homo sapiens]. 724 0.0
Alignment gi|NP_001159968.1| monocarboxylate transporter 1 [Homo sapiens]. 724 0.0
Alignment gi|NP_004722.2| monocarboxylate transporter 2 [Homo sapiens]. 498 e-141
Alignment gi|NP_001193881.1| monocarboxylate transporter 4 [Homo sapiens]. 315 6e-86
Alignment gi|NP_001193880.1| monocarboxylate transporter 4 [Homo sapiens]. 315 6e-86
Alignment gi|NP_001193879.1| monocarboxylate transporter 4 [Homo sapiens]. 315 6e-86
Alignment gi|NP_001035888.1| monocarboxylate transporter 4 [Homo sapiens]. 315 6e-86
Alignment gi|NP_004198.1| monocarboxylate transporter 4 [Homo sapiens]. 315 6e-86
Alignment gi|NP_001035887.1| monocarboxylate transporter 4 [Homo sapiens]. 315 6e-86
Alignment gi|NP_037488.2| monocarboxylate transporter 3 [Homo sapiens]. 311 1e-84
>ref|NP_003042.3| monocarboxylate transporter 1 [Homo sapiens].
Length = 500
Score = 724 bits (1870), Expect = 0.0
Identities = 366/478 (76%), Positives = 394/478 (82%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPPAVGGPVGYTPPD FISIGFSYAFPKSITVFFKEIEGIF+ATTSEVSW
Sbjct: 1 MPPAVGGPVGYTPPDGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEGIFHATTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMYGGGPISSILVNKYGSR VM AASFCNTVQ+LY+CIGVIG
Sbjct: 61 ISSIMLAVMYGGGPISSILVNKYGSRIVMIVGGCLSGCGLIAASFCNTVQQLYVCIGVIG 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFL TLAPLNQ FFGI+GWRGSFLI
Sbjct: 121 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLCTLAPLNQVFFGIFGWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAGALMRPIGPKPT A K +SK SL++A KS KK DANTDLIG +PK+
Sbjct: 181 LGGLLLNCCVAGALMRPIGPKPTKAGKDKSKASLEKAGKSGVKKDLHDANTDLIGRHPKQ 240
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EK+SVFQT+N+FLDL+LF HRGFLLYLSGNV+MFFGLF PLVFLS+YGKSQHYSSEK+AF
Sbjct: 241 EKRSVFQTINQFLDLTLFTHRGFLLYLSGNVIMFFGLFAPLVFLSSYGKSQHYSSEKSAF 300
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARPSMGLVANTK IRPR+QYFFAAS++ANGVCH++APLS++Y+GFC+YA
Sbjct: 301 LLSILAFVDMVARPSMGLVANTKPIRPRIQYFFAASVVANGVCHMLAPLSTTYVGFCVYA 360
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPV ND+YGDYK
Sbjct: 361 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDMYGDYK 420
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLAXXXXXXXXXXXXXXXXXTSIDAAEKPKKL 1639
YTYWAC MGINYRLLA TSID A KP ++
Sbjct: 421 YTYWACGVVLIISGIYLFIGMGINYRLLA-KEQKANEQKKESKEEETSIDVAGKPNEV 477
>ref|NP_001159968.1| monocarboxylate transporter 1 [Homo sapiens].
Length = 500
Score = 724 bits (1870), Expect = 0.0
Identities = 366/478 (76%), Positives = 394/478 (82%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPPAVGGPVGYTPPD FISIGFSYAFPKSITVFFKEIEGIF+ATTSEVSW
Sbjct: 1 MPPAVGGPVGYTPPDGGWGWAVVIGAFISIGFSYAFPKSITVFFKEIEGIFHATTSEVSW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMYGGGPISSILVNKYGSR VM AASFCNTVQ+LY+CIGVIG
Sbjct: 61 ISSIMLAVMYGGGPISSILVNKYGSRIVMIVGGCLSGCGLIAASFCNTVQQLYVCIGVIG 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFL TLAPLNQ FFGI+GWRGSFLI
Sbjct: 121 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLCTLAPLNQVFFGIFGWRGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKK 925
LGGLLLNCCVAGALMRPIGPKPT A K +SK SL++A KS KK DANTDLIG +PK+
Sbjct: 181 LGGLLLNCCVAGALMRPIGPKPTKAGKDKSKASLEKAGKSGVKKDLHDANTDLIGRHPKQ 240
Query: 926 EKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAF 1105
EK+SVFQT+N+FLDL+LF HRGFLLYLSGNV+MFFGLF PLVFLS+YGKSQHYSSEK+AF
Sbjct: 241 EKRSVFQTINQFLDLTLFTHRGFLLYLSGNVIMFFGLFAPLVFLSSYGKSQHYSSEKSAF 300
Query: 1106 LLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYA 1285
LLSILAFVDMVARPSMGLVANTK IRPR+QYFFAAS++ANGVCH++APLS++Y+GFC+YA
Sbjct: 301 LLSILAFVDMVARPSMGLVANTKPIRPRIQYFFAASVVANGVCHMLAPLSTTYVGFCVYA 360
Query: 1286 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYK 1465
GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPV ND+YGDYK
Sbjct: 361 GFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDMYGDYK 420
Query: 1466 YTYWACXXXXXXXXXXXXXXMGINYRLLAXXXXXXXXXXXXXXXXXTSIDAAEKPKKL 1639
YTYWAC MGINYRLLA TSID A KP ++
Sbjct: 421 YTYWACGVVLIISGIYLFIGMGINYRLLA-KEQKANEQKKESKEEETSIDVAGKPNEV 477
>ref|NP_004722.2| monocarboxylate transporter 2 [Homo sapiens].
Length = 478
Score = 498 bits (1283), Expect = e-141
Identities = 257/451 (56%), Positives = 314/451 (69%), Gaps = 2/451 (0%)
Frame = +2
Query: 206 MPPAVGGPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSW 385
MPP P + PPD FISIGFSYAFPK++TVFFKEI+ IF+ T SE++W
Sbjct: 1 MPPMPSAPPVHPPPDGGWGWIVVGAAFISIGFSYAFPKAVTVFFKEIQQIFHTTYSEIAW 60
Query: 386 ISSIMLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIG 565
ISSIMLAVMY GGP+SS+LVNKYGSRPV+ ASF ++V +LYL +G I
Sbjct: 61 ISSIMLAVMYAGGPVSSVLVNKYGSRPVVIAGGLLCCLGMVLASFSSSVVQLYLTMGFIT 120
Query: 566 GLGLAFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLI 745
GLGLAFNL PALT+IGKYFY++RP+ANGLAMAGSPVFLS+LAP NQ F +GW+GSFLI
Sbjct: 121 GLGLAFNLQPALTIIGKYFYRKRPMANGLAMAGSPVFLSSLAPFNQYLFNTFGWKGSFLI 180
Query: 746 LGGLLLNCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPK- 922
LG LLLN CVAG+LMRP+GP TT+ KS+ K G ++ ++ +PK
Sbjct: 181 LGSLLLNACVAGSLMRPLGPNQTTS-------------KSKNKTGKTEDDS-----SPKK 222
Query: 923 -KEKQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKA 1099
K K+S ++ +NK+LD SLFKHRGFL+YLSGNV+MF G F P++FL+ Y K Q A
Sbjct: 223 IKTKKSTWEKVNKYLDFSLFKHRGFLIYLSGNVIMFLGFFAPIIFLAPYAKDQGIDEYSA 282
Query: 1100 AFLLSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCI 1279
AFLLS++AFVDM ARPS+GL+AN+K+IRPR+QYFF+ +I+ NGVCHL+ PL+ Y +
Sbjct: 283 AFLLSVMAFVDMFARPSVGLIANSKYIRPRIQYFFSFAIMFNGVCHLLCPLAQDYTSLVL 342
Query: 1280 YAGFFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGD 1459
YA FFG FG +SSVLFETLMDLVG RFSSAVGLVTIVEC PV D+ G+
Sbjct: 343 YAVFFGLGFGSVSSVLFETLMDLVGAPRFSSAVGLVTIVECGPVLLGPPLAGKLVDLTGE 402
Query: 1460 YKYTYWACXXXXXXXXXXXXXXMGINYRLLA 1552
YKY Y +C INYRLLA
Sbjct: 403 YKYMYMSCGAIVVAASVWLLIGNAINYRLLA 433
>ref|NP_001193881.1| monocarboxylate transporter 4 [Homo sapiens].
Length = 465
Score = 315 bits (808), Expect = 6e-86
Identities = 175/417 (41%), Positives = 232/417 (55%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVF 943
NCCV ALMRP+ A+ G+ G P+ +
Sbjct: 189 NCCVCAALMRPL--------------------VVTAQPGS---------GPPRPSR---- 215
Query: 944 QTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILA 1123
+ LDLS+F+ RGF+LY +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 216 ----RLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILG 271
Query: 1124 FVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFA 1303
F+D+ ARP+ G VA +RP Y F+ S+ NG+ L + Y G ++ FFG +
Sbjct: 272 FIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGIS 331
Query: 1304 FGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
+G + ++ FE LM +VG +FSSA+GLV ++E V D Y Y +
Sbjct: 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVF 388
>ref|NP_001193880.1| monocarboxylate transporter 4 [Homo sapiens].
Length = 465
Score = 315 bits (808), Expect = 6e-86
Identities = 175/417 (41%), Positives = 232/417 (55%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVF 943
NCCV ALMRP+ A+ G+ G P+ +
Sbjct: 189 NCCVCAALMRPL--------------------VVTAQPGS---------GPPRPSR---- 215
Query: 944 QTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILA 1123
+ LDLS+F+ RGF+LY +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 216 ----RLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILG 271
Query: 1124 FVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFA 1303
F+D+ ARP+ G VA +RP Y F+ S+ NG+ L + Y G ++ FFG +
Sbjct: 272 FIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGIS 331
Query: 1304 FGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
+G + ++ FE LM +VG +FSSA+GLV ++E V D Y Y +
Sbjct: 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVF 388
>ref|NP_001193879.1| monocarboxylate transporter 4 [Homo sapiens].
Length = 465
Score = 315 bits (808), Expect = 6e-86
Identities = 175/417 (41%), Positives = 232/417 (55%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVF 943
NCCV ALMRP+ A+ G+ G P+ +
Sbjct: 189 NCCVCAALMRPL--------------------VVTAQPGS---------GPPRPSR---- 215
Query: 944 QTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILA 1123
+ LDLS+F+ RGF+LY +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 216 ----RLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILG 271
Query: 1124 FVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFA 1303
F+D+ ARP+ G VA +RP Y F+ S+ NG+ L + Y G ++ FFG +
Sbjct: 272 FIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGIS 331
Query: 1304 FGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
+G + ++ FE LM +VG +FSSA+GLV ++E V D Y Y +
Sbjct: 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVF 388
>ref|NP_001035888.1| monocarboxylate transporter 4 [Homo sapiens].
Length = 465
Score = 315 bits (808), Expect = 6e-86
Identities = 175/417 (41%), Positives = 232/417 (55%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVF 943
NCCV ALMRP+ A+ G+ G P+ +
Sbjct: 189 NCCVCAALMRPL--------------------VVTAQPGS---------GPPRPSR---- 215
Query: 944 QTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILA 1123
+ LDLS+F+ RGF+LY +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 216 ----RLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILG 271
Query: 1124 FVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFA 1303
F+D+ ARP+ G VA +RP Y F+ S+ NG+ L + Y G ++ FFG +
Sbjct: 272 FIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGIS 331
Query: 1304 FGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
+G + ++ FE LM +VG +FSSA+GLV ++E V D Y Y +
Sbjct: 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVF 388
>ref|NP_004198.1| monocarboxylate transporter 4 [Homo sapiens].
Length = 465
Score = 315 bits (808), Expect = 6e-86
Identities = 175/417 (41%), Positives = 232/417 (55%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVF 943
NCCV ALMRP+ A+ G+ G P+ +
Sbjct: 189 NCCVCAALMRPL--------------------VVTAQPGS---------GPPRPSR---- 215
Query: 944 QTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILA 1123
+ LDLS+F+ RGF+LY +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 216 ----RLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILG 271
Query: 1124 FVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFA 1303
F+D+ ARP+ G VA +RP Y F+ S+ NG+ L + Y G ++ FFG +
Sbjct: 272 FIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGIS 331
Query: 1304 FGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
+G + ++ FE LM +VG +FSSA+GLV ++E V D Y Y +
Sbjct: 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVF 388
>ref|NP_001035887.1| monocarboxylate transporter 4 [Homo sapiens].
Length = 465
Score = 315 bits (808), Expect = 6e-86
Identities = 175/417 (41%), Positives = 232/417 (55%)
Frame = +2
Query: 224 GPVGYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSIML 403
GP G PD F+ GFSYAFPK+++VFFKE+ F S+ +WISSI+L
Sbjct: 9 GPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILL 68
Query: 404 AVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGLAF 583
A++YG GP+ S+ VN++G RPVM AASFC ++ ++YL GVI GLGLA
Sbjct: 69 AMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTGVITGLGLAL 128
Query: 584 NLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGLLL 763
N P+L M+ +YF KRRP+ANGLA AGSPVFL L+PL Q YGWRG FLILGGLLL
Sbjct: 129 NFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLL 188
Query: 764 NCCVAGALMRPIGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKEKQSVF 943
NCCV ALMRP+ A+ G+ G P+ +
Sbjct: 189 NCCVCAALMRPL--------------------VVTAQPGS---------GPPRPSR---- 215
Query: 944 QTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFLLSILA 1123
+ LDLS+F+ RGF+LY +M GLF P VF+ +Y K KAAFLL+IL
Sbjct: 216 ----RLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILG 271
Query: 1124 FVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAGFFGFA 1303
F+D+ ARP+ G VA +RP Y F+ S+ NG+ L + Y G ++ FFG +
Sbjct: 272 FIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGIS 331
Query: 1304 FGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKYTY 1474
+G + ++ FE LM +VG +FSSA+GLV ++E V D Y Y +
Sbjct: 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVF 388
>ref|NP_037488.2| monocarboxylate transporter 3 [Homo sapiens].
Length = 504
Score = 311 bits (796), Expect = 1e-84
Identities = 175/423 (41%), Positives = 238/423 (56%), Gaps = 4/423 (0%)
Frame = +2
Query: 221 GGPV-GYTPPDXXXXXXXXXXXFISIGFSYAFPKSITVFFKEIEGIFNATTSEVSWISSI 397
GGP G PPD F+ GF+Y FPK+++VFF+ + F+A S+ +W+SSI
Sbjct: 4 GGPRRGEGPPDGGWGWVVLGACFVVTGFAYGFPKAVSVFFRALMRDFDAGYSDTAWVSSI 63
Query: 398 MLAVMYGGGPISSILVNKYGSRPVMXXXXXXXXXXXXAASFCNTVQELYLCIGVIGGLGL 577
MLA++YG GP+SSILV ++G RPVM ASF + ELYL GV+ GLGL
Sbjct: 64 MLAMLYGTGPVSSILVTRFGCRPVMLAGGLLASAGMILASFATRLLELYLTAGVLTGLGL 123
Query: 578 AFNLNPALTMIGKYFYKRRPLANGLAMAGSPVFLSTLAPLNQAFFGIYGWRGSFLILGGL 757
A N P+L M+G YF +RRPLANGLA AGSPVFLS L+PL Q +GWRG FL+LGGL
Sbjct: 124 ALNFQPSLIMLGLYFERRRPLANGLAAAGSPVFLSALSPLGQQLLERFGWRGGFLLLGGL 183
Query: 758 LLNCCVAGALMRP---IGPKPTTADKYRSKESLQEAEKSEAKKGASDANTDLIGGNPKKE 928
LL+CC GA+MRP GP+P R + A + + A A L +P+
Sbjct: 184 LLHCCACGAVMRPPPGPGPRP------RRDSAGDRAGDAPGEAEADGAGLQLREASPRVR 237
Query: 929 KQSVFQTLNKFLDLSLFKHRGFLLYLSGNVLMFFGLFTPLVFLSNYGKSQHYSSEKAAFL 1108
+ + LDL++ R F +Y LM GLF P + L NY K AAFL
Sbjct: 238 PR------RRLLDLAVCTDRAFAVYAVTKFLMALGLFVPAILLVNYAKDAGVPDTDAAFL 291
Query: 1109 LSILAFVDMVARPSMGLVANTKWIRPRVQYFFAASIIANGVCHLIAPLSSSYIGFCIYAG 1288
LSI+ FVD+VARP+ G +A +RP V Y F+ +++ANG+ L + + SY +
Sbjct: 292 LSIVGFVDIVARPACGALAGLARLRPHVPYLFSLALLANGLTDLSSARARSYGALVAFCV 351
Query: 1289 FFGFAFGWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVXXXXXXXXXXNDIYGDYKY 1468
FG ++G + ++ FE LM VG RF SA+GLV +VE V D+ +Y+
Sbjct: 352 AFGLSYGMVGALQFEVLMAAVGAPRFPSALGLVLLVEAAAVLIGPPSAGRLVDVLKNYEI 411
Query: 1469 TYW 1477
++
Sbjct: 412 IFY 414
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 61,422,451
Number of extensions: 1517166
Number of successful extensions: 5230
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 5205
Number of HSP's successfully gapped: 39
Length of query: 548
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 440
Effective length of database: 14,737,052
Effective search space: 6484302880
Effective search space used: 6484302880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009134
(1646 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr04 1671 0.0
>Sscrofa_Chr04
|| Length = 143465943
Score = 1671 bits (843), Expect = 0.0
Identities = 864/872 (99%), Gaps = 1/872 (0%)
Strand = Plus / Plus
Query: 565 aggtcttgggcttgccttcaacttgaatccagctctgaccatgattggcaagtatttcta 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117612592 aggtcttgggcttgccttcaacttgaatccagctctgaccatgattggcaagtatttcta 117612651
Query: 625 caagagacgaccattggcaaatggattggccatggcaggcagccctgtgttcctctctac 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117612652 caagagacgaccattggcaaatggattggccatggcaggcagccctgtgttcctctctac 117612711
Query: 685 cctggcccccctcaatcaggctttcttcggtatctacggctggagaggaagcttcctaat 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117612712 cctggcccccctcaatcaggctttcttcggtatctacggctggagaggaagcttcctaat 117612771
Query: 745 tcttgggggcttgctgttaaactgctgtgtagctggagccctgatgagaccaatagggcc 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117612772 tcttgggggcttgctgttaaactgctgtgtagctggagccctgatgagaccaatagggcc 117612831
Query: 805 caagccaaccactgcagacaaatatagatccaaagaatcccttcaggaagctgaaaaatc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117612832 caagccaaccactgcagacaaatatagatccaaagaatcccttcaggaagctgaaaaatc 117612891
Query: 865 tgaagcaaaaaagggggcaagtgacgcaaatacagatctcattggaggaaaccccaaaaa 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117612892 tgaagcaaaaaagggggcaagtgacgcaaatacagatctcattggaggaaaccccaaaaa 117612951
Query: 925 agagaaacagtcagtcttccaaacgcttaataaattcctggatttatccctattcaagca 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117612952 agagaaacagtcagtcttccaaacgcttaataaattcctggatttatccctattcaagca 117613011
Query: 985 cagaggctttttgctctacttgtctggaaatgtgctcatgttttttggactatttacacc 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117613012 cagaggctttttgctctacttgtctggaaatgtgctcatgttttttggactatttacacc 117613071
Query: 1045 tttggtgtttcttagtaattatggcaagagtcaacattactctagtgagaaggctgcctt 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117613072 tttggtgtttcttagtaattatggcaagagtcaacattactctagtgagaaggctgcctt 117613131
Query: 1105 cc-ttctttccatcctggcttttgttgacatggtagccagaccctctatgggacttgtag 1163
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117613132 cctttctttccatcctggcttttgttgacatggtagccagaccctctatgggacttgtag 117613191
Query: 1164 ccaacaccaagtggataagacctcgagtacagtannnnnnngctgcttctattattgcaa 1223
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 117613192 ccaacaccaagtggataagacctcgagtacagtatttttttgctgcttctattattgcaa 117613251
Query: 1224 atggagtgtgtcatctgatagcacctttatcctccagctatatagggttctgtatttatg 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117613252 atggagtgtgtcatctgatagcacctttatcctccagctatatagggttctgtatttatg 117613311
Query: 1284 cgggattctttggatttgcatttgggtggctcagctcagtattatttgaaacactgatgg 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117613312 cgggattctttggatttgcatttgggtggctcagctcagtattatttgaaacactgatgg 117613371
Query: 1344 accttgttggacctcagagattctccagtgctgtgggattggtgaccattgtagagtgct 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117613372 accttgttggacctcagagattctccagtgctgtgggattggtgaccattgtagagtgct 117613431
Query: 1404 gtcctgtcctcctggggccaccacttttaggt 1435
||||||||||||||||||||||||||||||||
Sbjct: 117613432 gtcctgtcctcctggggccaccacttttaggt 117613463
Score = 726 bits (366), Expect = 0.0
Identities = 743/871 (85%)
Strand = Plus / Plus
Query: 565 aggtcttgggcttgccttcaacttgaatccagctctgaccatgattggcaagtatttcta 624
|||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 117702141 aggtcttgggcttgccttcaacttcaatccggctctgaccataattggcaagtatttcta 117702200
Query: 625 caagagacgaccattggcaaatggattggccatggcaggcagccctgtgttcctctctac 684
|||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct: 117702201 caagagacgaccgttggcaaatggactggccatggcaggcagccctgtgttcctctgtgc 117702260
Query: 685 cctggcccccctcaatcaggctttcttcggtatctacggctggagaggaagcttcctaat 744
||||||||||||||| ||||| | || | || || |||||||||||||||||||||||
Sbjct: 117702261 cctggcccccctcaaccaggccctttttgctacctttggctggagaggaagcttcctaat 117702320
Query: 745 tcttgggggcttgctgttaaactgctgtgtagctggagccctgatgagaccaatagggcc 804
||| |||||| | || | ||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 117702321 tctcgggggcatcctactgaactgctgtgtggctggagccctgatgaggcccatagggcc 117702380
Query: 805 caagccaaccactgcagacaaatatagatccaaagaatcccttcaggaagctgaaaaatc 864
||||||| | ||| | ||| | | || |||||||||||||||||||||| || | |
Sbjct: 117702381 caagccagctggtgccgggaaagagaagtctaaagaatcccttcaggaagctggaacacc 117702440
Query: 865 tgaagcaaaaaagggggcaagtgacgcaaatacagatctcattggaggaaaccccaaaaa 924
| | ||||||| ||||||| |||| ||||||| || | | ||| ||||||| |||
Sbjct: 117702441 taatgcaaaaacgggggcaggtgatgcaaatatcgaagttaatggcttaaacccctcaaa 117702500
Query: 925 agagaaacagtcagtcttccaaacgcttaataaattcctggatttatccctattcaagca 984
|||||||| ||||| || ||||| |||| | | ||||| |||||||| ||||||||
Sbjct: 117702501 ggagaaacaatcagtttttcaaacagttaaccagcttctggacttatccctgttcaagca 117702560
Query: 985 cagaggctttttgctctacttgtctggaaatgtgctcatgttttttggactatttacacc 1044
|||||||||| |||||||| | ||||| ||||||||||||| ||||| || ||||||
Sbjct: 117702561 cagaggctttatgctctacctctctgggaatgtgctcatgtcttttgtgctggctacacc 117702620
Query: 1045 tttggtgtttcttagtaattatggcaagagtcaacattactctagtgagaaggctgcctt 1104
|||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 117702621 tttggtctttcttagtaattatgccaagagtcagcatcactctagtgagaaggctgcctt 117702680
Query: 1105 ccttctttccatcctggcttttgttgacatggtagccagaccctctatgggacttgtagc 1164
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 117702681 ccttctttccattctggcttttgttgacatggtagccagacccactatgggacttgtagc 117702740
Query: 1165 caacaccaagtggataagacctcgagtacagtannnnnnngctgcttctattattgcaaa 1224
|||||| |||||| |||||||| || | ||||| ||||||||||||||||||||
Sbjct: 117702741 caacacaaagtgggtaagacctggaattcagtatttttatgctgcttctattattgcaaa 117702800
Query: 1225 tggagtgtgtcatctgatagcacctttatcctccagctatatagggttctgtatttatgc 1284
||||||||||||| || ||| ||||||| || |||||||| |||||||||| | |||||
Sbjct: 117702801 tggagtgtgtcatatgctagtacctttagccaccagctatctagggttctgcctctatgc 117702860
Query: 1285 gggattctttggatttgcatttgggtggctcagctcagtattatttgaaacactgatgga 1344
|||||| |||||||||| ||||||||| | || | || || ||||| | ||||||||
Sbjct: 117702861 aggattccttggatttgcttttgggtggtttggcgccgtgttgtttgagtccctgatgga 117702920
Query: 1345 ccttgttggacctcagagattctccagtgctgtgggattggtgaccattgtagagtgctg 1404
||| ||||| | |||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 117702921 cctacttggatcccagagattctccagtgctgtgggattggtgaccattgtggagtgcgg 117702980
Query: 1405 tcctgtcctcctggggccaccacttttaggt 1435
|||| |||||||||||||||| ||||||||
Sbjct: 117702981 tcctatcctcctggggccaccgattttaggt 117703011
Score = 482 bits (243), Expect = e-133
Identities = 257/264 (97%)
Strand = Plus / Plus
Query: 161 gatacttggatttgaactgcattctggaacttacctacacttacaatgccaccggcagtt 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117603616 gatacttggatttgaactgcattctggaacttacctacacttacaatgccaccggcagtt 117603675
Query: 221 ggaggtccagtcggatacannnnnnnagatggaggctggggatgggcggtagtagttgga 280
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 117603676 ggaggtccagtcggatacacccccccagatggaggctggggatgggcggtagtagttgga 117603735
Query: 281 gctttcatttccatcggcttttcttatgcatttcccaaatctattactgtgttcttcaaa 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117603736 gctttcatttccatcggcttttcttatgcatttcccaaatctattactgtgttcttcaaa 117603795
Query: 341 gaaattgaaggtatatttaatgccacgactagtgaagtgtcatggatatcttccatcatg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117603796 gaaattgaaggtatatttaatgccacgactagtgaagtgtcatggatatcttccatcatg 117603855
Query: 401 ttggctgtcatgtatggtggaggt 424
||||||||||||||||||||||||
Sbjct: 117603856 ttggctgtcatgtatggtggaggt 117603879
Score = 410 bits (207), Expect = e-111
Identities = 217/219 (99%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 1429 tttaggtcgtctcaatgacatatacggagactataaatacacatactgggcatgtggcat 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117614633 tttaggtcgtctcaatgacatatacggagactataaatacacatactgggcatgtggcat 117614692
Query: 1489 aatcctgatcatctcaggcatctatcttttcatcggcatgggcatcaactaccgacttct 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117614693 aatcctgatcatctcaggcatctatcttttcatcggcatgggcatcaactaccgacttct 117614752
Query: 1549 ggcaaaagaacagaaagcagagaagcagcagataaaggaaaacaaagaggaagagaccag 1608
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 117614753 ggcaaaagaacagaaagcagagaagcagcagataaaggaaaacaaagaggaggagaccag 117614812
Query: 1609 tatagacgctgctgagaagcc-aaagaagttactgatgt 1646
||||||||||||||||||||| |||||||||||||||||
Sbjct: 117614813 tatagacgctgctgagaagccaaaagaagttactgatgt 117614851
Score = 319 bits (161), Expect = 3e-84
Identities = 161/161 (100%)
Strand = Plus / Plus
Query: 1 aaagtgctggagagctgcgacgtgactggcgcggcgcgtgggtgccggggcaagcgaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117580359 aaagtgctggagagctgcgacgtgactggcgcggcgcgtgggtgccggggcaagcgaaca 117580418
Query: 61 aggcagccggcgaaggacgcgacctgaatcctgggccccgcggaactgcagccgcgccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117580419 aggcagccggcgaaggacgcgacctgaatcctgggccccgcggaactgcagccgcgccgc 117580478
Query: 121 cgcgtcacgctcacgcctggcgccgcgagccgcgcataacg 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 117580479 cgcgtcacgctcacgcctggcgccgcgagccgcgcataacg 117580519
Score = 285 bits (144), Expect = 4e-74
Identities = 147/148 (99%)
Strand = Plus / Plus
Query: 421 aggtcctatcagcagtatcctggtgaataaatatggcagtcgtccagtcatgattattgg 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117608856 aggtcctatcagcagtgtcctggtgaataaatatggcagtcgtccagtcatgattattgg 117608915
Query: 481 cggctgcttgtcaggctgtggcttgattgcagcttccttctgtaacaccgtgcaggaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117608916 cggctgcttgtcaggctgtggcttgattgcagcttccttctgtaacaccgtgcaggaact 117608975
Query: 541 ttacttgtgcattggagtcattggaggt 568
||||||||||||||||||||||||||||
Sbjct: 117608976 ttacttgtgcattggagtcattggaggt 117609003
Score = 230 bits (116), Expect = 2e-57
Identities = 140/148 (94%)
Strand = Plus / Plus
Query: 421 aggtcctatcagcagtatcctggtgaataaatatggcagtcgtccagtcatgattattgg 480
||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||
Sbjct: 117697992 aggtcctatcagcagtatcctggtgaataaatatggcagtcgtccagtcgtcatttttgg 117698051
Query: 481 cggctgcttgtcaggctgtggcttgattgcagcttccttctgtaacaccgtgcaggaact 540
||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 117698052 cggttgcttgtcaggctgtggcttgatcgcagcttccttctgtaacaccatgcagcaact 117698111
Query: 541 ttacttgtgcattggagtcattggaggt 568
|||| |||||||||||||||||||||||
Sbjct: 117698112 ttacctgtgcattggagtcattggaggt 117698139
Score = 200 bits (101), Expect = 2e-48
Identities = 146/161 (90%)
Strand = Plus / Plus
Query: 1429 tttaggtcgtctcaatgacatatacggagactataaatacacatactgggcatgtggcat 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117706930 tttaggtcgtctcaatgacatatacggagactataaatacacatactgggcatgtggcat 117706989
Query: 1489 aatcctgatcatctcaggcatctatcttttcatcggcatgggcatcaactaccgacttct 1548
||||||||||||||||||||||||||| | ||| ||||||||||| | | |||||| |
Sbjct: 117706990 aatcctgatcatctcaggcatctatctctgcattggcatgggcattcattttcgacttgt 117707049
Query: 1549 ggcaaaagaacagaaagcagagaagcagcagataaaggaaa 1589
|||||||||||||| |||||| || ||||| ||||||||
Sbjct: 117707050 ggcaaaagaacagagggcagaggagaagcaggaaaaggaaa 117707090
Score = 139 bits (70), Expect = 5e-30
Identities = 151/178 (84%)
Strand = Plus / Plus
Query: 247 agatggaggctggggatgggcggtagtagttggagctttcatttccatcggcttttctta 306
||||||||||||||| ||||| || || |||||||||||||||||||| ||||| || |
Sbjct: 117696276 agatggaggctgggggtgggcagtggttgttggagctttcatttccattggcttctcctg 117696335
Query: 307 tgcatttcccaaatctattactgtgttcttcaaagaaattgaaggtatatttaatgccac 366
||||||| |||||| |||||||| || | |||||||||||||| |||||||| ||||
Sbjct: 117696336 tgcatttggcaaatccattactgtattttacaaagaaattgaagaaatatttaaagccag 117696395
Query: 367 gactagtgaagtgtcatggatatcttccatcatgttggctgtcatgtatggtggaggt 424
| ||||||||| |||||| ||||||||||| || ||||||||||||| |||||||
Sbjct: 117696396 cagtagtgaagtttcatggttatcttccatcgcatttgctgtcatgtatgctggaggt 117696453
Score = 81.8 bits (41), Expect = 1e-12
Identities = 110/133 (82%)
Strand = Plus / Plus
Query: 292 catcggcttttcttatgcatttcccaaatctattactgtgttcttcaaagaaattgaagg 351
||||||||| |||||||| || || ||||| || || ||||||||||| || ||||| |
Sbjct: 77108118 catcggcttctcttatgccttcccaaaatccatcacggtgttcttcaaggagattgaggt 77108177
Query: 352 tatatttaatgccacgactagtgaagtgtcatggatatcttccatcatgttggctgtcat 411
|||||||||||||| | || | ||||||||||| || || |||||| ||||||||||
Sbjct: 77108178 catatttaatgccaccagcagccaggtgtcatggatctcctcaatcatgctggctgtcat 77108237
Query: 412 gtatggtggaggt 424
||||| |||||||
Sbjct: 77108238 gtatgctggaggt 77108250
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 50,553,399
Number of extensions: 423
Number of successful extensions: 423
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 416
Number of HSP's successfully gapped: 13
Length of query: 1646
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1624
Effective length of database: 2,808,408,574
Effective search space: 4560855524176
Effective search space used: 4560855524176
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)