Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009193
(1004 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002688602.1| PREDICTED: cytochrome P450, family 4, subfam... 473 e-134
Alignment gi|XP_002704774.1| PREDICTED: cytochrome P450, family 4, subfam... 473 e-134
Alignment gi|NP_001030214.1| cytochrome P450, family 4, subfamily F, poly... 468 e-132
Alignment gi|XP_002688601.1| PREDICTED: cytochrome P450, family 4, subfam... 455 e-128
Alignment gi|XP_586481.3| PREDICTED: cytochrome P450, family 4, subfamily... 455 e-128
Alignment gi|NP_001068790.1| cytochrome P450, family 4, subfamily F, poly... 440 e-123
Alignment gi|NP_001039856.1| leukotriene-B(4) omega-hydroxylase 2 [Bos ta... 390 e-108
Alignment gi|XP_002688603.1| PREDICTED: cytochrome P450, family 4, subfam... 310 2e-84
Alignment gi|NP_001071376.1| cytochrome P450, family 4, subfamily A, poly... 177 1e-44
Alignment gi|NP_001092460.1| cytochrome P450, family 4, subfamily A, poly... 172 4e-43
>ref|XP_002688602.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Bos taurus].
Length = 524
Score = 473 bits (1218), Expect = e-134
Identities = 220/288 (76%), Positives = 247/288 (85%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
ML+LSLSWLGLGPV ASPW A VL WT TS +N RLR FPQPPK NW
Sbjct: 1 MLELSLSWLGLGPVAASPWLLLLLVGASWILAHVLAWTYTSYNNSLRLRCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGH+G VPPTE+G++K+TQ++ YP G+++WMGPI P+++ CHPDLIRT A+ASAA+APK
Sbjct: 61 LGHLGLVPPTEQGLSKVTQLVTNYPQGYLMWMGPIIPLVIFCHPDLIRTFASASAAIAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
+VVFY+FLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIF S ++MHAKWQR
Sbjct: 121 NVVFYNFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFTKSADIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+ EGH LDMFEHISLMTLDSLQKCVFS+DSNCQEKPS+YIAAILELSALVAKR+QQIF
Sbjct: 181 LIIEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQEKPSDYIAAILELSALVAKRYQQIF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLR 951
LH+DFLYYLTPDGWRF ACRLVHDFT AVIQERR TLP E IDDFL+
Sbjct: 241 LHMDFLYYLTPDGWRFRRACRLVHDFTGAVIQERRRTLPKEDIDDFLK 288
>ref|XP_002704774.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Bos taurus].
Length = 524
Score = 473 bits (1218), Expect = e-134
Identities = 220/288 (76%), Positives = 247/288 (85%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
ML+LSLSWLGLGPV ASPW A VL WT TS +N RLR FPQPPK NW
Sbjct: 1 MLELSLSWLGLGPVAASPWLLLLLVGASWILAHVLAWTYTSYNNSLRLRCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGH+G VPPTE+G++K+TQ++ YP G+++WMGPI P+++ CHPDLIRT A+ASAA+APK
Sbjct: 61 LGHLGLVPPTEQGLSKVTQLVTNYPQGYLMWMGPIIPLVIFCHPDLIRTFASASAAIAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
+VVFY+FLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIF S ++MHAKWQR
Sbjct: 121 NVVFYNFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFTKSADIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+ EGH LDMFEHISLMTLDSLQKCVFS+DSNCQEKPS+YIAAILELSALVAKR+QQIF
Sbjct: 181 LIIEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQEKPSDYIAAILELSALVAKRYQQIF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLR 951
LH+DFLYYLTPDGWRF ACRLVHDFT AVIQERR TLP E IDDFL+
Sbjct: 241 LHMDFLYYLTPDGWRFRRACRLVHDFTGAVIQERRRTLPKEDIDDFLK 288
>ref|NP_001030214.1| cytochrome P450, family 4, subfamily F, polypeptide 2 [Bos taurus].
Length = 524
Score = 468 bits (1203), Expect = e-132
Identities = 222/292 (76%), Positives = 244/292 (83%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
ML+LSLSWLGLGPV ASPW AR+L WT T +N RRL+ FPQPPK NW
Sbjct: 1 MLELSLSWLGLGPVAASPWLLLLFTGASWLLARILAWTYTFYNNSRRLQCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGH+G VPPTE+GM+KLT+++ Y GF IWMGPITPIIV CHPDLIR +ANASAAVAPK
Sbjct: 61 LGHLGLVPPTEQGMSKLTELVAKYSQGFRIWMGPITPIIVFCHPDLIRIVANASAAVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DV+FY+ LKPWLGDGLLLSAGDKWS HRRMLTPAFHFNILKPYMKIF S ++MHAKWQ
Sbjct: 121 DVIFYEVLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIFTKSTDIMHAKWQH 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+ EGH LDMFEHISLMTLDSLQKC+FS+DSNCQEKPSEYIAAILELSALVAKRHQ+IF
Sbjct: 181 LIKEGHTHLDMFEHISLMTLDSLQKCIFSYDSNCQEKPSEYIAAILELSALVAKRHQEIF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH+DFLYYLTPDG RF ACRLVHDFTDAVIQE TLP+E IDDFL+ K
Sbjct: 241 LHMDFLYYLTPDGRRFRRACRLVHDFTDAVIQEWHRTLPSESIDDFLKAKAK 292
>ref|XP_002688601.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Bos taurus].
Length = 523
Score = 455 bits (1171), Expect = e-128
Identities = 216/292 (73%), Positives = 241/292 (82%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
ML+LSLSWLGL PV ASPW A VL WT T +N R L+ FPQPPK NW
Sbjct: 1 MLELSLSWLGLRPVAASPWLLLVLVGASWILAHVLAWTYTFYNNSRHLQCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGHMGQ PPTE+G+ TQ++ YP GF I +GP PII+ CHPD+IR +ANASAA APK
Sbjct: 61 LGHMGQYPPTEKGLRDFTQLVANYPQGFRICLGPAIPIIIFCHPDMIRIVANASAAAAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DV+FYDFLKPWLGDGLLLSAGDKWS HRRMLTPAFHFNILKPYMKIF S ++MHAKWQR
Sbjct: 121 DVIFYDFLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIFTKSADIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+TEGH LDMFEHISLMTLDSLQKCVFS+DSNCQEKP+EYIA+ILELSALVAKR+QQIF
Sbjct: 181 LITEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQEKPNEYIASILELSALVAKRNQQIF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH+DFLY+LTPD RF ACRLVHDFTDAVIQERR+TLP+EG DDFL+ +K
Sbjct: 241 LHMDFLYFLTPDWRRFRRACRLVHDFTDAVIQERRHTLPSEGTDDFLKAKVK 292
>ref|XP_586481.3| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Bos taurus].
Length = 523
Score = 455 bits (1171), Expect = e-128
Identities = 216/292 (73%), Positives = 241/292 (82%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
ML+LSLSWLGL PV ASPW A VL WT T +N R L+ FPQPPK NW
Sbjct: 1 MLELSLSWLGLRPVAASPWLLLVLVGASWILAHVLAWTYTFYNNSRHLQCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGHMGQ PPTE+G+ TQ++ YP GF I +GP PII+ CHPD+IR +ANASAA APK
Sbjct: 61 LGHMGQYPPTEKGLRDFTQLVANYPQGFRICLGPAIPIIIFCHPDMIRIVANASAAAAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DV+FYDFLKPWLGDGLLLSAGDKWS HRRMLTPAFHFNILKPYMKIF S ++MHAKWQR
Sbjct: 121 DVIFYDFLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIFTKSADIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+TEGH LDMFEHISLMTLDSLQKCVFS+DSNCQEKP+EYIA+ILELSALVAKR+QQIF
Sbjct: 181 LITEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQEKPNEYIASILELSALVAKRNQQIF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH+DFLY+LTPD RF ACRLVHDFTDAVIQERR+TLP+EG DDFL+ +K
Sbjct: 241 LHMDFLYFLTPDWRRFRRACRLVHDFTDAVIQERRHTLPSEGTDDFLKAKVK 292
>ref|NP_001068790.1| cytochrome P450, family 4, subfamily F, polypeptide 2 [Bos taurus].
Length = 523
Score = 440 bits (1131), Expect = e-123
Identities = 208/292 (71%), Positives = 236/292 (80%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
ML+LSLS LGLGP+ ASPW ARVL WT T +N RRLR F QPPKPNW
Sbjct: 1 MLELSLSRLGLGPLAASPWLLPLLAGVSWILARVLAWTYTFYNNSRRLRCFLQPPKPNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGHM VP TE+G+ TQM YP G++IW GPI P+++ CHPD++R++ NASAA+APK
Sbjct: 61 LGHMNLVPSTEQGLIYFTQMAANYPRGYLIWFGPIIPMVIFCHPDMLRSITNASAAIAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D+ FY LKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPY+KIF S +MHAKW+
Sbjct: 121 DMQFYGTLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYIKIFTKSAEIMHAKWEH 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+TEGH LDMFEHISL+TLD+LQKCVFSFDSNCQEKPSEYIAAILELSALV+KR+QQ+F
Sbjct: 181 LITEGHTHLDMFEHISLLTLDNLQKCVFSFDSNCQEKPSEYIAAILELSALVSKRNQQLF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
L++DFLYYLT DG RF ACRLVHDFTDAVIQERR TLP E IDDFL+ K
Sbjct: 241 LYMDFLYYLTSDGQRFRNACRLVHDFTDAVIQERRRTLPKENIDDFLKAKAK 292
>ref|NP_001039856.1| leukotriene-B(4) omega-hydroxylase 2 [Bos taurus].
Length = 522
Score = 390 bits (1001), Expect = e-108
Identities = 189/292 (64%), Positives = 218/292 (74%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
ML+LSLSWLGLGPV ASPW AR+L W DN RLR FPQPPK +W
Sbjct: 1 MLELSLSWLGLGPVAASPWLLLLLVGASWILARILAWIYAFYDNCCRLRCFPQPPKRSWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH+G EE M + ++ + + + + WMGP PI+ L HP+ + + ASA + PK
Sbjct: 61 WGHLGLAQSNEESMRLVEELGHYFRDVHLWWMGPFFPILRLVHPNFVAPLLQASATIIPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D+ FY FLKPWLGDGLLLSAGDKWSSHRR+LTPAFHF ILKPYMKIFN S ++MHAKWQR
Sbjct: 121 DMFFYSFLKPWLGDGLLLSAGDKWSSHRRLLTPAFHFEILKPYMKIFNKSADIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L EG RLDMFEHISLMTLDSLQKCVFS+DSNCQEKPSEYIAAILELSALV KR + IF
Sbjct: 181 LALEGSTRLDMFEHISLMTLDSLQKCVFSYDSNCQEKPSEYIAAILELSALVMKRIKHIF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH+DFLYYLT DG RF ACRLVHDFTDA+IQ+RR TL ++G +FL+ K
Sbjct: 241 LHVDFLYYLTRDGQRFYRACRLVHDFTDAIIQKRRRTLISQGSQEFLKTKTK 292
>ref|XP_002688603.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
22-like [Bos taurus].
Length = 531
Score = 310 bits (793), Expect = 2e-84
Identities = 145/243 (59%), Positives = 181/243 (74%)
Frame = +1
Query: 223 RRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPD 402
RRLR FPQPP+ NWLLGH+G P E G+ ++++ + ++W+GP+ P++VL HPD
Sbjct: 54 RRLRCFPQPPRRNWLLGHLGMYLPNERGLQDEKKVLDDMHHVILVWLGPVLPLVVLVHPD 113
Query: 403 LIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMK 582
I+ + ASAAVAPKD +FY FLKPWLGDGLLLS GDKWS HRR+LTPAFHF+ILKPYMK
Sbjct: 114 YIKPLVGASAAVAPKDDLFYGFLKPWLGDGLLLSRGDKWSRHRRLLTPAFHFDILKPYMK 173
Query: 583 IFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAI 762
IFN + MHAKW+ L LDMFEH+SLMTLD LQKCVFS++SNCQEK S+YI+AI
Sbjct: 174 IFNQCADTMHAKWRGLAEGSEVSLDMFEHVSLMTLDCLQKCVFSYNSNCQEKMSDYISAI 233
Query: 763 LELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDD 942
+ELSALV +R ++ +LDF+YY T DG RF AC VH FT VIQERR L +G +
Sbjct: 234 IELSALVVRRQYRLHHYLDFIYYRTADGRRFRQACDTVHGFTTEVIQERRRALRQQGAEA 293
Query: 943 FLR 951
+ +
Sbjct: 294 WFK 296
>ref|NP_001071376.1| cytochrome P450, family 4, subfamily A, polypeptide 11 [Bos
taurus].
Length = 514
Score = 177 bits (450), Expect = 1e-44
Identities = 102/254 (40%), Positives = 146/254 (57%), Gaps = 3/254 (1%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEG-MTKLTQMMNTYPNGFMIWMGPITPIIVLCH 396
++ L FP PP +W GH + EEG + L + + YP + WM ++++
Sbjct: 45 LKALHHFPSPPS-HWFYGHKREFQ--EEGELPHLLKRVEKYPRACVRWMWGTRALLLVYD 101
Query: 397 PDLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPY 576
PD ++ + S PK + + F+KPW+G GLLL G W HRRMLTPAFH++ILKPY
Sbjct: 102 PDYMKMVLGRSD---PKAQIIHRFVKPWIGTGLLLLEGQTWFQHRRMLTPAFHYDILKPY 158
Query: 577 MKIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEY 750
+ I DSV VM KW+ LV++ + L++F H+SLMTLD++ KC FS + Q Y
Sbjct: 159 VGIMADSVRVMLDKWEELVSQ-DSHLEIFGHVSLMTLDTIMKCAFSQQGSVQTDRNSQSY 217
Query: 751 IAAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTE 930
I AI ++S L+ R + F D +Y LTP+G AC+L H TDAVI+ER+ L E
Sbjct: 218 IQAIKDVSHLIISRLRNAFHQNDLIYRLTPEGHWNHRACQLAHQHTDAVIKERKVRLQKE 277
Query: 931 GIDDFLRPXLKLNF 972
G + +R L+F
Sbjct: 278 GELEKVRSRRHLDF 291
>ref|NP_001092460.1| cytochrome P450, family 4, subfamily A, polypeptide 22 [Bos
taurus].
Length = 515
Score = 172 bits (436), Expect = 4e-43
Identities = 99/253 (39%), Positives = 140/253 (55%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ L FP PP +W GH + E + L + + YP + W+ ++++ P
Sbjct: 45 LKALHQFPSPPS-HWFYGHKKEFQKESE-LPPLLERVEKYPKACVRWLWGTKALVLVYDP 102
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D ++ S PK Y +L PW+G GLLL G KW HRRMLTPAF ++ILK Y+
Sbjct: 103 DYMKVFLGRSD---PKPHRTYKYLAPWIGTGLLLLEGQKWFQHRRMLTPAFRYDILKAYV 159
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYI 753
I DSV VM KW+ LV++ + L++F H+SLMTLD++ KC FS + Q YI
Sbjct: 160 GIMADSVRVMLDKWEELVSQ-DSHLEIFGHVSLMTLDTIMKCAFSHQGSVQMDRSSQSYI 218
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
AI +LS L+ R + F D +Y LTP+G AC+L H TDAVI+ER+ L EG
Sbjct: 219 QAIRDLSHLIVSRLRNAFHQNDLIYRLTPEGRWNHRACQLTHQHTDAVIKERKAHLQKEG 278
Query: 934 IDDFLRPXLKLNF 972
+ +R L+F
Sbjct: 279 ELEKVRSRRHLDF 291
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,639,856
Number of extensions: 1353824
Number of successful extensions: 5953
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 5925
Number of HSP's successfully gapped: 12
Length of query: 334
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 231
Effective length of database: 14,273,310
Effective search space: 3297134610
Effective search space used: 3297134610
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009193
(1004 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_541982.2| PREDICTED: similar to Cytochrome P450 4F3 (CYPI... 404 e-113
Alignment gi|XP_541983.2| PREDICTED: similar to Cytochrome P450 4F6 (CYPI... 377 e-104
Alignment gi|XP_541984.2| PREDICTED: similar to cytochrome P450, family 2... 315 6e-86
Alignment gi|NP_001041499.1| cytochrome P450, family 4, subfamily A, poly... 173 2e-43
Alignment gi|NP_001041482.1| cytochrome P450 4A38 [Canis lupus familiaris]. 172 5e-43
Alignment gi|NP_001041490.1| cytochrome P450 4A37 [Canis lupus familiaris]. 164 1e-40
Alignment gi|XP_850244.1| PREDICTED: similar to cytochrome P450, family 4... 163 3e-40
Alignment gi|NP_001193862.1| cytochrome P450 4X1 [Canis lupus familiaris]. 154 1e-37
Alignment gi|XP_860991.1| PREDICTED: similar to cytochrome P450, family 4... 144 1e-34
Alignment gi|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4... 115 7e-26
>ref|XP_541982.2| PREDICTED: similar to Cytochrome P450 4F3 (CYPIVF3)
(Leukotriene-B(4) omega-hydroxylase) (Leukotriene-B(4)
20-monooxygenase) (Cytochrome P450-LTB-omega) [Canis
familiaris].
Length = 465
Score = 404 bits (1037), Expect = e-113
Identities = 200/292 (68%), Positives = 227/292 (77%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
MLQLSLSWLGLG + ASPW RVL W+ + D RRL+ FPQPPK NW
Sbjct: 1 MLQLSLSWLGLGQLAASPWVLLLLVGATWLLTRVLAWSYSFYDIRRRLQCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH+G + +EEG+ ++ +TY + W+GP +I + HP I+ + +SAA+APK
Sbjct: 61 WGHVGLIQSSEEGLLYTQELASTYGDVCCWWVGPWHAVIRIFHPTYIKPVLFSSAAIAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D+VFY LKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPY+KIFN S NVMHAKW+R
Sbjct: 121 DMVFYSLLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYVKIFNYSTNVMHAKWKR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
LV+EG LDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQI
Sbjct: 181 LVSEGSTHLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQI- 239
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH+DFLYYLTPDG RF ACRLVH+FTDAVIQERR TLP +G+DDFL K
Sbjct: 240 LHMDFLYYLTPDGQRFRRACRLVHNFTDAVIQERRRTLPVQGVDDFLMTKAK 291
>ref|XP_541983.2| PREDICTED: similar to Cytochrome P450 4F6 (CYPIVF6) [Canis
familiaris].
Length = 540
Score = 377 bits (967), Expect = e-104
Identities = 182/293 (62%), Positives = 218/293 (74%)
Frame = +1
Query: 73 APDRRMLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPP 252
AP MLQ+SLSWLGLG + ASPW ARVL W+ + DN RLR FPQPP
Sbjct: 16 APFHVMLQVSLSWLGLGQLAASPWVLLLLAGATWLLARVLTWSYSFYDNCCRLRCFPQPP 75
Query: 253 KPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASA 432
K NW GH+G V EEG+ + + + + + + W+GP P++ L HP + + A A
Sbjct: 76 KRNWFWGHLGLVKSNEEGLRMIEDLGHYFRDVHLWWIGPFYPVLRLVHPKFVAPLLQAPA 135
Query: 433 AVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMH 612
+ PKD+ FY+FLKPWLGDGLLLSAGDKWS HRR+LTPAFHF ILK Y+KIFN S ++MH
Sbjct: 136 TIVPKDMFFYNFLKPWLGDGLLLSAGDKWSHHRRLLTPAFHFEILKSYVKIFNRSADIMH 195
Query: 613 AKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKR 792
AKW+RLV+EG LDMFEHISLMTLDSLQKCVFSFDSNCQE PSEYIAAILELSALV KR
Sbjct: 196 AKWKRLVSEGSTHLDMFEHISLMTLDSLQKCVFSFDSNCQESPSEYIAAILELSALVVKR 255
Query: 793 HQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLR 951
++Q+ L+LDFLY L+PDG RF AC LVH+FTDA+IQERR+TL + G DFL+
Sbjct: 256 NEQVLLYLDFLYNLSPDGRRFRRACELVHNFTDAIIQERRHTLISRGSCDFLK 308
>ref|XP_541984.2| PREDICTED: similar to cytochrome P450, family 2, subfamily E,
polypeptide 2 homolog [Canis familiaris].
Length = 531
Score = 315 bits (806), Expect = 6e-86
Identities = 146/243 (60%), Positives = 184/243 (75%)
Frame = +1
Query: 223 RRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPD 402
RRL FPQPP+ NWLLGH+G P E G+ ++++ + ++W+GP+ P++VL HPD
Sbjct: 54 RRLSCFPQPPRRNWLLGHLGMYLPNETGLQDEKKVLDNMHHVILVWIGPVLPLLVLVHPD 113
Query: 403 LIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMK 582
I+ + ASAA+APKD +FY FLKPWLGDGLLLS GDKWS HRR+LTPAFHF+ILKPYMK
Sbjct: 114 YIKPLVGASAAIAPKDDLFYGFLKPWLGDGLLLSKGDKWSRHRRLLTPAFHFDILKPYMK 173
Query: 583 IFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAI 762
IFN ++MH KW+RL LDMFEH+SLMTLDSLQKCVFS++SNCQEK S+YI+AI
Sbjct: 174 IFNQCTDIMHGKWRRLAQGSVISLDMFEHVSLMTLDSLQKCVFSYNSNCQEKMSDYISAI 233
Query: 763 LELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDD 942
+ELSALV +R ++ H+DF+YYLT DG RF AC VH FT VIQERR L +G +
Sbjct: 234 IELSALVVRRQYRLHHHIDFIYYLTADGRRFRQACDTVHRFTTEVIQERRQALRQQGAET 293
Query: 943 FLR 951
+L+
Sbjct: 294 WLK 296
>ref|NP_001041499.1| cytochrome P450, family 4, subfamily A, polypeptide 11 [Canis lupus
familiaris].
Length = 510
Score = 173 bits (439), Expect = 2e-43
Identities = 97/253 (38%), Positives = 148/253 (58%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ ++ FP PP +WL GH ++ +E + L + + +P F W+ I++ P
Sbjct: 45 LKAVQQFPSPPS-HWLFGHKRELQKGDE-LQLLLKWIEDFPCAFSRWIWGTEAEIMIYDP 102
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D ++ + S PK Y + PW+G GLLL G+ WS HRRMLTPAFH++ILKPY+
Sbjct: 103 DYMKLILGRSD---PKPDGSYKLMAPWIGYGLLLLNGETWSQHRRMLTPAFHYDILKPYV 159
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYI 753
++ DSV VM KW+ L+++ ++ L++F+H+SLMTLD++ KC FS+ N Q YI
Sbjct: 160 RLMADSVQVMLDKWEELLSQ-NSHLEIFDHVSLMTLDTIMKCAFSYQGNHQADRNSQAYI 218
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
AI +L+ LV R + +F D Y LT +G R AC+L H TD VI+ R+ L +G
Sbjct: 219 QAIRDLNNLVFARMRNVFYQKDIFYGLTSEGRRNHKACQLAHQHTDRVIKLRKAQLQDKG 278
Query: 934 IDDFLRPXLKLNF 972
+ +R L+F
Sbjct: 279 ELEKVRNKRHLDF 291
>ref|NP_001041482.1| cytochrome P450 4A38 [Canis lupus familiaris].
Length = 510
Score = 172 bits (436), Expect = 5e-43
Identities = 99/253 (39%), Positives = 144/253 (56%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ ++ FP PP +W GH + E + +L + YP W+ +V+ P
Sbjct: 45 LKAIQQFPSPPS-HWFFGHRQEFQKGRE-LQELKKRTEKYPCASPRWLWGSRVSLVVYDP 102
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D +R + S PK Y + PW+G GLLL G+ W HRRMLTPAFH++ILKPY+
Sbjct: 103 DYMRMILGRSD---PKSDGSYRLMAPWIGYGLLLLNGEIWFQHRRMLTPAFHYDILKPYV 159
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYI 753
++ DSV VM KW+ L+T+ ++ L++FEH+SLMTLD++ KC FS+ N Q YI
Sbjct: 160 RLMADSVQVMLDKWEELLTQ-NSHLEIFEHVSLMTLDTIMKCAFSYQGNHQADRNSQAYI 218
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
AI +L+ LV R + +F D Y LT +G R AC+L H+ TD VI+ R+ L EG
Sbjct: 219 QAIRDLNNLVFARVRNVFYQKDIFYGLTSEGRRNHKACQLAHEHTDRVIKLRKAQLQDEG 278
Query: 934 IDDFLRPXLKLNF 972
+ +R L+F
Sbjct: 279 ELEKIRNKRHLDF 291
>ref|NP_001041490.1| cytochrome P450 4A37 [Canis lupus familiaris].
Length = 510
Score = 164 bits (415), Expect = 1e-40
Identities = 95/253 (37%), Positives = 142/253 (56%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ ++ FP PP +W GH + +E + + YP W+ +V+ P
Sbjct: 45 LKAVQQFPSPPS-HWFFGHKQEFQTGQE-LQVFQKWTEKYPCASPRWLWGSRVSLVVYDP 102
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D ++ + S PK Y F+ PW+G GLLL G+ W HRRMLTPAFH++ILKPY+
Sbjct: 103 DYMKMILGRSD---PKAGGSYTFITPWIGYGLLLLHGEAWFQHRRMLTPAFHYDILKPYV 159
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYI 753
++ DSV VM KW+ L+T+ ++ L++FEH+SLMTLD++ KC FS+ N Q YI
Sbjct: 160 RLMADSVQVMLDKWEELLTQ-NSHLEIFEHVSLMTLDTIMKCAFSYQGNHQADRNSQAYI 218
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
AI +++ LV R + +F D Y LT +G R A ++ H TD VI+ R+ L EG
Sbjct: 219 QAIRDMNNLVFARVRNVFYQKDIFYGLTSEGRRNHKARQIAHQHTDRVIKLRKAQLQDEG 278
Query: 934 IDDFLRPXLKLNF 972
+ +R L+F
Sbjct: 279 ELEKVRNKRHLDF 291
>ref|XP_850244.1| PREDICTED: similar to cytochrome P450, family 4, subfamily B,
polypeptide 1 isoform 2 [Canis familiaris].
Length = 511
Score = 163 bits (412), Expect = 3e-40
Identities = 88/251 (35%), Positives = 135/251 (53%), Gaps = 1/251 (0%)
Frame = +1
Query: 223 RRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPD 402
R + FP PP +WL GH ++ T + K+ + Y +W+GP + + PD
Sbjct: 41 RAMDSFPGPPT-HWLFGHAQEIQQTGS-LDKVVTWAHQYDYAHPLWLGPFLGFLNIYEPD 98
Query: 403 LIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMK 582
+ + + PK YDF W+G GLL+ G KW HR++LTP FH+++LK Y+
Sbjct: 99 YAKAVYSRGD---PKAADVYDFFLQWIGKGLLVLQGPKWYQHRKLLTPGFHYDVLKSYVA 155
Query: 583 IFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVF-SFDSNCQEKPSEYIAA 759
+F +S + M KW+ E + D+F + M LDSL KC F DS+ + S Y +A
Sbjct: 156 VFTNSTHAMLDKWEEKAREDKS-FDIFCDVGYMALDSLMKCTFGKGDSSLGHRDSSYYSA 214
Query: 760 ILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGID 939
+ +L+ L+ +R + H DF+Y+LTP G RF AC+ HD TD VI+ER+ L E
Sbjct: 215 VRDLTLLMQQRIESFQYHNDFIYWLTPHGRRFLRACQAAHDHTDQVIRERKAALQDEKEQ 274
Query: 940 DFLRPXLKLNF 972
+ ++ L+F
Sbjct: 275 EKIQNRRHLDF 285
>ref|NP_001193862.1| cytochrome P450 4X1 [Canis lupus familiaris].
Length = 507
Score = 154 bits (390), Expect = 1e-37
Identities = 85/239 (35%), Positives = 125/239 (52%), Gaps = 2/239 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
+R L FP PP +W GH + + + KL +++ YP F W+GP + P
Sbjct: 40 LRDLCPFPAPPT-HWFYGHQKLLQDGK--IEKLEELVEKYPCAFPYWVGPFQAFFYIYDP 96
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D +T + PK Y FL P LG+GL+ G KW HR +LTP F+ NILK Y+
Sbjct: 97 DYAKTFLGRTD---PKSKYLYKFLIPCLGNGLVNLEGSKWFQHRCLLTPGFNVNILKSYI 153
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSE--YI 753
K+ SVN M KW+++ +++FEHI+LMTLD L KC FS ++NCQ + Y+
Sbjct: 154 KVMAHSVNTMLGKWEKICGTQDTVVEVFEHINLMTLDVLMKCAFSQETNCQISSNHDLYV 213
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTE 930
E S + R H D ++ +P G R +++H +T+ VIQ+R+ L E
Sbjct: 214 KTTFEASKINFYRLYSFLHHHDIIFKFSPQGHRLQELVKILHQYTEKVIQDRKKLLKDE 272
>ref|XP_860991.1| PREDICTED: similar to cytochrome P450, family 4, subfamily B,
polypeptide 1 isoform 3 [Canis familiaris].
Length = 496
Score = 144 bits (364), Expect = 1e-34
Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 1/251 (0%)
Frame = +1
Query: 223 RRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPD 402
R + FP PP +WL GH ++ T + K+ + Y +W+GP + + PD
Sbjct: 41 RAMDSFPGPPT-HWLFGHAQEIQQTGS-LDKVVTWAHQYDYAHPLWLGPFLGFLNIYEPD 98
Query: 403 LIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMK 582
+ + + G GLL+ G KW HR++LTP FH+++LK Y+
Sbjct: 99 YAKAVYSRG------------------GKGLLVLQGPKWYQHRKLLTPGFHYDVLKSYVA 140
Query: 583 IFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSF-DSNCQEKPSEYIAA 759
+F +S + M KW+ E + D+F + M LDSL KC F DS+ + S Y +A
Sbjct: 141 VFTNSTHAMLDKWEEKAREDKS-FDIFCDVGYMALDSLMKCTFGKGDSSLGHRDSSYYSA 199
Query: 760 ILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGID 939
+ +L+ L+ +R + H DF+Y+LTP G RF AC+ HD TD VI+ER+ L E
Sbjct: 200 VRDLTLLMQQRIESFQYHNDFIYWLTPHGRRFLRACQAAHDHTDQVIRERKAALQDEKEQ 259
Query: 940 DFLRPXLKLNF 972
+ ++ L+F
Sbjct: 260 EKIQNRRHLDF 270
>ref|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4, subfamily v,
polypeptide 2 [Canis familiaris].
Length = 575
Score = 115 bits (288), Expect = 7e-26
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 8/254 (3%)
Frame = +1
Query: 184 RVLVWTCTSLDNVRRLRGFPQPPKPNWLLGHMGQV-PPTEEGMTKLTQMMNTYPNG---- 348
R L + ++R FP P L+ H + PP + + Q + Y
Sbjct: 78 RFLQMLASYAQKCHQMRAFPSLPGAYPLVEHSLLINPPGKVRGREFFQQVILYSEESRHL 137
Query: 349 --FMIWMGPITPIIVLCHPDLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWS 522
+W+GPI PI+ + + + + +S + V Y FL+PWLG GLL S G+KW
Sbjct: 138 PLLKLWLGPI-PIVAIYSAENVEVILTSSRQIDKSYV--YKFLEPWLGLGLLTSTGNKWR 194
Query: 523 SHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQK 702
S R+MLTP FHF IL+ ++ + N+ N++ K ++ V + + F +I+L LD + +
Sbjct: 195 SRRKMLTPTFHFTILEDFLDVMNEHANILVNKLEKHVNQ--EAFNCFFYITLCALDIICE 252
Query: 703 CVFSFDSNCQ-EKPSEYIAAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVH 879
+ Q + SEY+ AI +S + +R + +L LDFL+ + +G ++H
Sbjct: 253 TAMGKNIGAQNNEDSEYVRAIYRMSDTIHRRMKMPWLWLDFLFLMFKEGREHKRNLEILH 312
Query: 880 DFTDAVIQERRNTL 921
+FT+ VI ER + L
Sbjct: 313 NFTNNVITERASEL 326
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,438,115
Number of extensions: 1389467
Number of successful extensions: 5879
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 5844
Number of HSP's successfully gapped: 11
Length of query: 334
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 231
Effective length of database: 15,440,896
Effective search space: 3566846976
Effective search space used: 3566846976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009193
(1004 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003123481.1| PREDICTED: leukotriene-B(4) omega-hydroxylas... 569 e-162
Alignment gi|XP_003123482.1| PREDICTED: leukotriene-B(4) omega-hydroxylas... 491 e-139
Alignment gi|XP_003354173.1| PREDICTED: cytochrome P450 4F22-like [Sus sc... 318 3e-87
Alignment gi|XP_003354174.1| PREDICTED: cytochrome P450 4F6-like [Sus scr... 262 3e-70
Alignment gi|XP_003128064.2| PREDICTED: cytochrome P450 4A24-like isoform... 170 1e-42
Alignment gi|XP_003356525.1| PREDICTED: cytochrome P450 4A24-like isoform... 169 2e-42
Alignment gi|XP_003127953.1| PREDICTED: cytochrome P450 4A11-like [Sus sc... 166 1e-41
Alignment gi|NP_999590.1| taurochenodeoxycholic 6 alpha-hydroxylase [Sus ... 161 6e-40
Alignment gi|NP_999589.1| cytochrome P450 4A24 [Sus scrofa]. 157 9e-39
Alignment gi|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus sc... 157 1e-38
>ref|XP_003123481.1| PREDICTED: leukotriene-B(4) omega-hydroxylase 2 isoform 1 [Sus
scrofa].
Length = 524
Score = 569 bits (1466), Expect = e-162
Identities = 274/292 (93%), Positives = 275/292 (94%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
MLQLSLSWLGLGPVEASPW ARVLVWTCTSLDNVRRLRGFPQPPKPNWL
Sbjct: 1 MLQLSLSWLGLGPVEASPWLLLLLVGASWLLARVLVWTCTSLDNVRRLRGFPQPPKPNWL 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK
Sbjct: 61 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR
Sbjct: 121 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF
Sbjct: 181 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LHLDFLYYLTPDGWRF ACRLVHDFTDAVIQERRNTLPTEGIDDFL+ K
Sbjct: 241 LHLDFLYYLTPDGWRFHKACRLVHDFTDAVIQERRNTLPTEGIDDFLKAKAK 292
>ref|XP_003123482.1| PREDICTED: leukotriene-B(4) omega-hydroxylase 2 isoform 2 [Sus
scrofa].
Length = 524
Score = 491 bits (1264), Expect = e-139
Identities = 239/292 (81%), Positives = 251/292 (85%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
MLQLSLSWLGLGPVEASPW ARVLVWTCTSLDNVRRLRGFPQPPKPNWL
Sbjct: 1 MLQLSLSWLGLGPVEASPWLLLLLVGASWLLARVLVWTCTSLDNVRRLRGFPQPPKPNWL 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGHMGQ+ +EEG+ + +TY + W+GP +I + HP I+ + A AAVAPK
Sbjct: 61 LGHMGQIESSEEGLLYTQDLASTYGDVCCWWVGPWHAVIRIFHPTCIKPVLFAPAAVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR
Sbjct: 121 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF
Sbjct: 181 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LHLDFLYYLTPDGWRF ACRLVHDFTDAVIQERRNTLPTEGIDDFL+ K
Sbjct: 241 LHLDFLYYLTPDGWRFHKACRLVHDFTDAVIQERRNTLPTEGIDDFLKAKAK 292
>ref|XP_003354173.1| PREDICTED: cytochrome P450 4F22-like [Sus scrofa].
Length = 531
Score = 318 bits (815), Expect = 3e-87
Identities = 148/243 (60%), Positives = 186/243 (76%)
Frame = +1
Query: 223 RRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPD 402
RRLR FPQPP+ NWLLGH+G P E G+ ++++ + ++W+GP+ P++VL HPD
Sbjct: 54 RRLRCFPQPPRRNWLLGHLGMYLPNEMGLRAEKKVLDNMHHVILVWIGPVLPLLVLVHPD 113
Query: 403 LIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMK 582
I+ + ASAA+APKD +FY FLKPWLGDGLLLS GDKWS HRRMLTPAFHF+ILKPYMK
Sbjct: 114 YIKPVVGASAAIAPKDDLFYGFLKPWLGDGLLLSKGDKWSRHRRMLTPAFHFDILKPYMK 173
Query: 583 IFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAI 762
IFN N+MHAKW+RL LDMFEH+SLMTLDSLQKCVFS++SNCQEK S+YI+AI
Sbjct: 174 IFNQCTNIMHAKWRRLAEGSVVSLDMFEHVSLMTLDSLQKCVFSYNSNCQEKMSDYISAI 233
Query: 763 LELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDD 942
++LSALV +R ++ LH+DF+YY T +G RF AC VH FT VIQERR L +G +
Sbjct: 234 IQLSALVVQRQYRLHLHIDFIYYCTAEGRRFRKACDTVHRFTTEVIQERRRALRQQGAEA 293
Query: 943 FLR 951
+L+
Sbjct: 294 WLK 296
>ref|XP_003354174.1| PREDICTED: cytochrome P450 4F6-like [Sus scrofa].
Length = 216
Score = 262 bits (669), Expect = 3e-70
Identities = 125/216 (57%), Positives = 149/216 (68%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
MLQLSLSWLGLGPV ASPW +R+L W DN RLR FPQPPK NW
Sbjct: 1 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYDFYDNCCRLRCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH EE + + + + + + ++ W+GP PI+ L HP+ + + A A + K
Sbjct: 61 WGHQDLAKSNEECLQLMEDVGHYFHDVYLWWLGPFYPILRLVHPNFVAPLLQAPATIIHK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D+ Y FLKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIFN S ++MHAKWQ
Sbjct: 121 DMFLYIFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQE 735
L +EGH RLDMFEHISLMTLDSLQKCVFSFDSNCQE
Sbjct: 181 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQE 216
>ref|XP_003128064.2| PREDICTED: cytochrome P450 4A24-like isoform 1 [Sus scrofa].
Length = 504
Score = 170 bits (430), Expect = 1e-42
Identities = 97/253 (38%), Positives = 144/253 (56%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ L+ FP PP +WL GH + E + L + + YP+ +W ++++ P
Sbjct: 39 LKALQQFPSPPS-HWLYGHSREFQEESE-LPPLLKRVEKYPSACALWRWGTRAMVLVYDP 96
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D ++ + S PK + Y +L PWLG+GLLL G W HRRMLTPAFH +ILKPY+
Sbjct: 97 DYMKVVLARSE---PKPHITYKYLIPWLGNGLLLLDGQAWFQHRRMLTPAFHHDILKPYV 153
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQE--KPSEYI 753
++ DSV VM KW++LV + RL++ +SLMTLD++ KC FS + Q YI
Sbjct: 154 RLMADSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGNSHSYI 212
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
AI +L+ L+ R + +F D +Y L+P+G R AC+L H TD VIQ R+ L +G
Sbjct: 213 QAIRDLNDLLFSRVRNVFQQNDVIYRLSPEGRRSHRACQLAHQHTDRVIQLRKAQLQKQG 272
Query: 934 IDDFLRPXLKLNF 972
+ +R L+F
Sbjct: 273 EMENVRKKRHLDF 285
>ref|XP_003356525.1| PREDICTED: cytochrome P450 4A24-like isoform 2 [Sus scrofa].
Length = 504
Score = 169 bits (428), Expect = 2e-42
Identities = 97/253 (38%), Positives = 144/253 (56%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ L+ FP PP +WL GH + E + L + + YP+ +W ++++ P
Sbjct: 39 LKALQQFPSPPS-HWLYGHSREFQEESE-LPPLLKRVEKYPSACALWRWGTRAMVLVYDP 96
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D ++ + S PK+ V Y L PW+G+GLLL G W HRRMLTPAFH +ILKPY+
Sbjct: 97 DYMKVVLARSD---PKNSVVYRLLIPWIGNGLLLLDGQAWFQHRRMLTPAFHHDILKPYV 153
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQE--KPSEYI 753
++ DSV VM KW++LV + RL++ +SLMTLD++ KC FS + Q YI
Sbjct: 154 RLMADSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGNSHSYI 212
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
AI +L+ L+ R + +F D +Y L+P+G R AC+L H TD VIQ R+ L +G
Sbjct: 213 QAIRDLNDLLFSRVRNVFQQNDVIYRLSPEGRRSHRACQLAHQHTDRVIQLRKAQLQKQG 272
Query: 934 IDDFLRPXLKLNF 972
+ +R L+F
Sbjct: 273 EMENVRKKRHLDF 285
>ref|XP_003127953.1| PREDICTED: cytochrome P450 4A11-like [Sus scrofa].
Length = 510
Score = 166 bits (421), Expect = 1e-41
Identities = 97/253 (38%), Positives = 141/253 (55%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ L+ FP PP +WL GH + + L ++ N +P W+ +V+ P
Sbjct: 45 LKALQQFPSPPS-HWLYGHSREHLKDNDLQEALRRVKN-FPRACPYWLWGNKAHLVIYDP 102
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D ++ + S PK + FL PW+G GLLLS G W HRRMLTPAFH++ILKPY+
Sbjct: 103 DYMKVVLGRSD---PKLTDVHKFLSPWIGYGLLLSDGQTWFQHRRMLTPAFHYDILKPYV 159
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYI 753
+ DSV VM KW++LVT+ + L++F H+SLMTLD++ KC FS+ + Q YI
Sbjct: 160 NLMADSVKVMLDKWEQLVTQ-DSHLEIFGHVSLMTLDTVMKCAFSYQGSVQTDRNSHSYI 218
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
A+ L++L R + D +Y L+P+G AC+L H TD VI+ R+ L EG
Sbjct: 219 QAVGNLNSLFVARLRSALYQNDIIYRLSPEGRLSRQACQLAHQHTDQVIRLRKAHLQKEG 278
Query: 934 IDDFLRPXLKLNF 972
+ LR L+F
Sbjct: 279 EMENLRKKRHLDF 291
>ref|NP_999590.1| taurochenodeoxycholic 6 alpha-hydroxylase [Sus scrofa].
Length = 504
Score = 161 bits (407), Expect = 6e-40
Identities = 95/253 (37%), Positives = 139/253 (54%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ L+ FP PP +WL GH + E + L + + YP+ W+ ++++ P
Sbjct: 39 LKALQQFPSPPS-HWLYGHSREFQEESE-LQPLLKRVEKYPSACARWLWGTRAMVLVYDP 96
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D ++ + S AP V Y L PW+G GLLL G W RRMLTPAFH++ILKPY+
Sbjct: 97 DYMKVVLARSEPKAP---VLYRLLIPWIGCGLLLLNGQMWFQRRRMLTPAFHYDILKPYV 153
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQE--KPSEYI 753
+ SV VM KW++LV + RL++ +SLMTLD++ KC FS + Q YI
Sbjct: 154 GLMAKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSAQTDGDSQSYI 212
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
AI +L L+ R + FL D +Y L+P+G + AC+ VH TD VIQ R+ L EG
Sbjct: 213 QAIWDLKNLIFSRLRSAFLQNDIIYRLSPEGRQCQRACQKVHQHTDRVIQLRKTHLQKEG 272
Query: 934 IDDFLRPXLKLNF 972
+ ++ L+F
Sbjct: 273 EMENVKKKRHLDF 285
>ref|NP_999589.1| cytochrome P450 4A24 [Sus scrofa].
Length = 504
Score = 157 bits (397), Expect = 9e-39
Identities = 94/253 (37%), Positives = 138/253 (54%), Gaps = 2/253 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
++ L+ FP PP +WL GH + E + L + + YP+ W+ ++++ P
Sbjct: 39 LKALQQFPSPPS-HWLYGHSREFQEESE-LPPLLKRVEKYPSACARWLWGTRAMVLVYDP 96
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D ++ + S PK V Y L PW+G GLLL G W RRMLTPAFH++ILKPY+
Sbjct: 97 DYMKVVLARSD---PKTSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYV 153
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQE--KPSEYI 753
+ SV VM KW++LV + RL++ +SLMTLD++ KC FS + Q YI
Sbjct: 154 GLMAKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYI 212
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEG 933
AI +L L + R + FL D +Y L+P+G + A R+ H TD VIQ R+ L +G
Sbjct: 213 QAIWDLKNLFSTRTKSAFLQNDIIYRLSPEGHKNHRAARIAHQHTDRVIQLRKAQLQKQG 272
Query: 934 IDDFLRPXLKLNF 972
+ +R L+F
Sbjct: 273 EMENVRKKRHLDF 285
>ref|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus scrofa].
Length = 504
Score = 157 bits (396), Expect = 1e-38
Identities = 96/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEG-MTKLTQMMNTYPNGFMIWMGPITPIIVLCH 396
++ L+ FP PP +WL GH + EEG L + + YP+ W ++++
Sbjct: 39 LKALQQFPSPPS-HWLYGHSREFQ--EEGEQQSLLKRIGKYPSACARWRWGTRALVLVYD 95
Query: 397 PDLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPY 576
PD ++ + S PK+ V Y L PW+G GLLL G W RRMLTPAFH++ILKPY
Sbjct: 96 PDYMKVVLARSD---PKNSVVYRLLIPWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPY 152
Query: 577 MKIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQE--KPSEY 750
+ + SV VM KW++LV + RL++ +SLMTLD++ KC FS + Q Y
Sbjct: 153 VGLMAKSVQVMLDKWEQLVAQ-DPRLEIVGPVSLMTLDTIMKCAFSHQGSTQTDGDSHSY 211
Query: 751 IAAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTE 930
I AI +L L + R + FL D +Y L+P+G + A R+ H TD VIQ R+ L +
Sbjct: 212 IQAIWDLKNLFSTRTKSAFLQNDIIYRLSPEGRKSHRAARIAHQHTDRVIQLRKAQLQKQ 271
Query: 931 GIDDFLRPXLKLNF 972
G + +R L+F
Sbjct: 272 GEMENVRKKRHLDF 285
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,156,681
Number of extensions: 872087
Number of successful extensions: 4060
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4029
Number of HSP's successfully gapped: 16
Length of query: 334
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 235
Effective length of database: 8,879,129
Effective search space: 2086595315
Effective search space used: 2086595315
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009193
(1004 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001191265.1| leukotriene-B4 omega-hydroxylase 3 [Mus musc... 426 e-119
Alignment gi|NP_001191264.1| leukotriene-B4 omega-hydroxylase 3 [Mus musc... 426 e-119
Alignment gi|NP_001191263.1| leukotriene-B4 omega-hydroxylase 3 [Mus musc... 426 e-119
Alignment gi|NP_001191262.1| leukotriene-B4 omega-hydroxylase 3 [Mus musc... 426 e-119
Alignment gi|NP_071879.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculu... 426 e-119
Alignment gi|NP_001095058.1| cytochrome P450, family 4, subfamily f, poly... 410 e-115
Alignment gi|NP_598888.1| cytochrome P450, family 4, subfamily f, polypep... 394 e-110
Alignment gi|NP_001094915.1| cytochrome P450, family 4, subfamily f, poly... 374 e-104
Alignment gi|NP_077764.2| leukotriene-B(4) omega-hydroxylase 2 [Mus muscu... 372 e-103
Alignment gi|NP_570952.1| cytochrome P450, family 4, subfamily f, polypep... 367 e-102
>ref|NP_001191265.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculus].
Length = 524
Score = 426 bits (1094), Expect = e-119
Identities = 198/292 (67%), Positives = 234/292 (80%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLSWLGLGP A PW AR+L+ + N R L GFPQPPK NWL
Sbjct: 1 MSQLSLSWLGLGPEVAFPWKTLLLLGASWILARILIQIYAAYRNYRHLHGFPQPPKRNWL 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
+GH+G V PTE+G+ +LT+++ TYP GF++W+GP+ P+I LCH D++R++ NASAAVA K
Sbjct: 61 MGHVGMVTPTEQGLKELTRLVGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DV+FY LKPWLGDGLL+SAGDKWS HRRMLTPAFHFNILKPY+KIFNDS N+MHAKWQR
Sbjct: 121 DVIFYSILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+++G RLDMFEH+SLMTLDSLQKCVFSFDSNCQEK SEYIAAILELSALVAKRHQQ
Sbjct: 181 LISDGSARLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
+ +D LY LTPDG RF AC +VH+FTDAVI+ER TLP +G+DDFL+ K
Sbjct: 241 MFMDLLYNLTPDGMRFRKACNVVHEFTDAVIRERHRTLPDQGLDDFLKSKAK 292
>ref|NP_001191264.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculus].
Length = 524
Score = 426 bits (1094), Expect = e-119
Identities = 198/292 (67%), Positives = 234/292 (80%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLSWLGLGP A PW AR+L+ + N R L GFPQPPK NWL
Sbjct: 1 MSQLSLSWLGLGPEVAFPWKTLLLLGASWILARILIQIYAAYRNYRHLHGFPQPPKRNWL 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
+GH+G V PTE+G+ +LT+++ TYP GF++W+GP+ P+I LCH D++R++ NASAAVA K
Sbjct: 61 MGHVGMVTPTEQGLKELTRLVGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DV+FY LKPWLGDGLL+SAGDKWS HRRMLTPAFHFNILKPY+KIFNDS N+MHAKWQR
Sbjct: 121 DVIFYSILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+++G RLDMFEH+SLMTLDSLQKCVFSFDSNCQEK SEYIAAILELSALVAKRHQQ
Sbjct: 181 LISDGSARLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
+ +D LY LTPDG RF AC +VH+FTDAVI+ER TLP +G+DDFL+ K
Sbjct: 241 MFMDLLYNLTPDGMRFRKACNVVHEFTDAVIRERHRTLPDQGLDDFLKSKAK 292
>ref|NP_001191263.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculus].
Length = 524
Score = 426 bits (1094), Expect = e-119
Identities = 198/292 (67%), Positives = 234/292 (80%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLSWLGLGP A PW AR+L+ + N R L GFPQPPK NWL
Sbjct: 1 MSQLSLSWLGLGPEVAFPWKTLLLLGASWILARILIQIYAAYRNYRHLHGFPQPPKRNWL 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
+GH+G V PTE+G+ +LT+++ TYP GF++W+GP+ P+I LCH D++R++ NASAAVA K
Sbjct: 61 MGHVGMVTPTEQGLKELTRLVGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DV+FY LKPWLGDGLL+SAGDKWS HRRMLTPAFHFNILKPY+KIFNDS N+MHAKWQR
Sbjct: 121 DVIFYSILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+++G RLDMFEH+SLMTLDSLQKCVFSFDSNCQEK SEYIAAILELSALVAKRHQQ
Sbjct: 181 LISDGSARLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
+ +D LY LTPDG RF AC +VH+FTDAVI+ER TLP +G+DDFL+ K
Sbjct: 241 MFMDLLYNLTPDGMRFRKACNVVHEFTDAVIRERHRTLPDQGLDDFLKSKAK 292
>ref|NP_001191262.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculus].
Length = 524
Score = 426 bits (1094), Expect = e-119
Identities = 198/292 (67%), Positives = 234/292 (80%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLSWLGLGP A PW AR+L+ + N R L GFPQPPK NWL
Sbjct: 1 MSQLSLSWLGLGPEVAFPWKTLLLLGASWILARILIQIYAAYRNYRHLHGFPQPPKRNWL 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
+GH+G V PTE+G+ +LT+++ TYP GF++W+GP+ P+I LCH D++R++ NASAAVA K
Sbjct: 61 MGHVGMVTPTEQGLKELTRLVGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DV+FY LKPWLGDGLL+SAGDKWS HRRMLTPAFHFNILKPY+KIFNDS N+MHAKWQR
Sbjct: 121 DVIFYSILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+++G RLDMFEH+SLMTLDSLQKCVFSFDSNCQEK SEYIAAILELSALVAKRHQQ
Sbjct: 181 LISDGSARLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
+ +D LY LTPDG RF AC +VH+FTDAVI+ER TLP +G+DDFL+ K
Sbjct: 241 MFMDLLYNLTPDGMRFRKACNVVHEFTDAVIRERHRTLPDQGLDDFLKSKAK 292
>ref|NP_071879.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculus].
Length = 524
Score = 426 bits (1094), Expect = e-119
Identities = 198/292 (67%), Positives = 234/292 (80%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLSWLGLGP A PW AR+L+ + N R L GFPQPPK NWL
Sbjct: 1 MSQLSLSWLGLGPEVAFPWKTLLLLGASWILARILIQIYAAYRNYRHLHGFPQPPKRNWL 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
+GH+G V PTE+G+ +LT+++ TYP GF++W+GP+ P+I LCH D++R++ NASAAVA K
Sbjct: 61 MGHVGMVTPTEQGLKELTRLVGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
DV+FY LKPWLGDGLL+SAGDKWS HRRMLTPAFHFNILKPY+KIFNDS N+MHAKWQR
Sbjct: 121 DVIFYSILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L+++G RLDMFEH+SLMTLDSLQKCVFSFDSNCQEK SEYIAAILELSALVAKRHQQ
Sbjct: 181 LISDGSARLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
+ +D LY LTPDG RF AC +VH+FTDAVI+ER TLP +G+DDFL+ K
Sbjct: 241 MFMDLLYNLTPDGMRFRKACNVVHEFTDAVIRERHRTLPDQGLDDFLKSKAK 292
>ref|NP_001095058.1| cytochrome P450, family 4, subfamily f, polypeptide 40 [Mus
musculus].
Length = 524
Score = 410 bits (1055), Expect = e-115
Identities = 194/292 (66%), Positives = 226/292 (77%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M L LSWLGLGP+ ASPW AR L T +RL GFPQPPK NW
Sbjct: 1 MRYLDLSWLGLGPMSASPWLLFFLVGISWFLARFLTQLYTLYAKCQRLCGFPQPPKKNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH+G PPTEEGM ++T+++ TYP GFM W+GPI P+I LCHPD+IR++ +ASAAVAPK
Sbjct: 61 WGHLGMSPPTEEGMKQVTELVTTYPQGFMTWLGPIVPLITLCHPDIIRSVLSASAAVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D +FY FLKPWLGDGLL+SAGDKW+ HRRMLTPAFHFNILKPY+KIFNDS N+MHAKW R
Sbjct: 121 DDIFYSFLKPWLGDGLLVSAGDKWNRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWLR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L + G RL+MFE+ISLMTLD+LQKCVFSF+SNCQEKPS+YIAAILELS L KR++Q+
Sbjct: 181 LASGGSTRLNMFENISLMTLDTLQKCVFSFNSNCQEKPSQYIAAILELSTLAVKRNEQLL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
+H+D LY LTPDG RF ACRLVHDFTDAVIQERR TL G DD ++ K
Sbjct: 241 MHVDLLYRLTPDGMRFYKACRLVHDFTDAVIQERRRTLLKHGGDDIIKAKAK 292
>ref|NP_598888.1| cytochrome P450, family 4, subfamily f, polypeptide 15 [Mus
musculus].
Length = 534
Score = 394 bits (1011), Expect = e-110
Identities = 193/293 (65%), Positives = 220/293 (75%)
Frame = +1
Query: 85 RMLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNW 264
RM QL LSWLGL +SPW ARVL T L FPQPPK NW
Sbjct: 5 RMPQLDLSWLGLRLEASSPWLLLLLIGASWLLARVLTQTYIFYRTYHHLCDFPQPPKWNW 64
Query: 265 LLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAP 444
LGH+G + PTE G+ ++T ++ TYP GFM W+GPI PII LCHPD+IR++ NASA+VA
Sbjct: 65 FLGHLGMITPTEHGLKEVTNLVATYPQGFMTWLGPIIPIITLCHPDIIRSVLNASASVAL 124
Query: 445 KDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQ 624
K+VVFY FLKPWLGDGLLLS GDKWSSHRRMLTPAFHFNILKPY+KIFNDS N+MHAKWQ
Sbjct: 125 KEVVFYSFLKPWLGDGLLLSDGDKWSSHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQ 184
Query: 625 RLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQI 804
L + G RLD+FE+ISLMTLDSLQKCVFSFDSNCQE PSEYI+AILELSALV KR+ Q+
Sbjct: 185 HLASGGSARLDVFENISLMTLDSLQKCVFSFDSNCQENPSEYISAILELSALVTKRYHQL 244
Query: 805 FLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH+D LY LT G RF AC LVH FTDAVIQ+RR TLP++ DD L+ K
Sbjct: 245 LLHIDSLYQLTCSGRRFHKACHLVHSFTDAVIQDRRRTLPSKHEDDVLKAKAK 297
>ref|NP_001094915.1| cytochrome P450, family 4, subfamily f, polypeptide 17 [Mus
musculus].
Length = 524
Score = 374 bits (959), Expect = e-104
Identities = 181/292 (61%), Positives = 212/292 (72%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
MLQL LSWLGLGP A PW AR+L W C DN RLR FP+PP +W
Sbjct: 1 MLQLGLSWLGLGPGAAFPWQLLQLVGASLFLARILTWICAFYDNYCRLRCFPEPPSRHWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GHM V EEG+ LT+ + + + + W+GP PI+ L HP I + ASAAVAPK
Sbjct: 61 WGHMSMVKNNEEGLQLLTERSHQFHDVHLCWIGPFYPILRLIHPKFIGPILQASAAVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
+++FY FLKPWLGDGLL+SAG+KWS HR +LTPAFHF+ILKPYMK FN SVN+MHAKWQR
Sbjct: 121 EMIFYGFLKPWLGDGLLVSAGEKWSRHRHLLTPAFHFDILKPYMKNFNKSVNIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L T+G LDM EHISLMTLDSLQ CVFSFDSNCQE PSEYIAAI ELS+L+ KRH Q F
Sbjct: 181 LTTKGTACLDMLEHISLMTLDSLQNCVFSFDSNCQESPSEYIAAIQELSSLIVKRHHQPF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
L+LDFLYY T DG RF AC LVH+FTDAVI+ERR TL ++ +D+FL+ K
Sbjct: 241 LYLDFLYYCTADGRRFRKACDLVHNFTDAVIRERRRTLSSQNLDEFLKSKTK 292
>ref|NP_077764.2| leukotriene-B(4) omega-hydroxylase 2 [Mus musculus].
Length = 524
Score = 372 bits (955), Expect = e-103
Identities = 180/292 (61%), Positives = 214/292 (73%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLS+SW+GLG ASPW A +L +N RLR FPQPPK NW+
Sbjct: 1 MSQLSMSWMGLGHTAASPWLLLLLAGASCLLAYILTPIYGVFENSLRLRCFPQPPKRNWI 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGH+G + +EEG+ + ++ T+ + W+GP+ P+I + HP I+ + A A VAPK
Sbjct: 61 LGHLGLIQSSEEGLLYIQSLVRTFRDACCWWVGPLHPVIRIFHPAFIKPVVLAPALVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D VFY FLKPWLGDGLL+S GDKWS HRRMLTPAFHFNILKPY+K+FNDS N+MHAKWQR
Sbjct: 121 DTVFYRFLKPWLGDGLLMSTGDKWSRHRRMLTPAFHFNILKPYVKVFNDSTNIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L ++G L+MFEHISLMTLDSLQKCVFSFDSNCQEKPSEYI AILELS LVA+RHQ++
Sbjct: 181 LASKGSAYLNMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYITAILELSTLVARRHQRLL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH+D YYLT DG RF ACRLVHDFTDAVI+ERR TL +G D L+ K
Sbjct: 241 LHVDLFYYLTHDGMRFRKACRLVHDFTDAVIRERRRTLLDQGGVDVLKAKAK 292
>ref|NP_570952.1| cytochrome P450, family 4, subfamily f, polypeptide 13 [Mus
musculus].
Length = 523
Score = 367 bits (943), Expect = e-102
Identities = 179/292 (61%), Positives = 218/292 (74%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
MLQL LSWLG+G + ASPW AR+L W DN RLR FPQPPKP+W
Sbjct: 1 MLQLCLSWLGMGSLTASPWHLLLLGGASWILARILAWIYAFYDNCSRLRCFPQPPKPSWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH+ + EE M +T + + + + + W+GP+ PI+ L HP+ I + ASAAVAPK
Sbjct: 61 WGHLALMKNNEESMQFITHLGHDFHDVHLSWVGPVYPILRLVHPNFIAPLLQASAAVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
++ Y FLKPWLGDGLL+SAGDKWS HRR+LTPAFHF+ILK Y+KIFN SVN+MHAKWQ
Sbjct: 121 EMTLYGFLKPWLGDGLLMSAGDKWSHHRRLLTPAFHFDILKSYVKIFNKSVNIMHAKWQC 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L ++G +RLDMFEHISLMTLDSLQKC+FS DSNCQE S+YIAAILELS+LV KRH+Q F
Sbjct: 181 LASKGTSRLDMFEHISLMTLDSLQKCIFSVDSNCQESDSKYIAAILELSSLVVKRHRQPF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
L+LD LYYLT DG RF AC LVH+FTDAVI+ERR+TL T+G+ +FL+ K
Sbjct: 241 LYLDLLYYLTADGRRFRKACDLVHNFTDAVIKERRSTLNTQGV-EFLKAKAK 291
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,669,312
Number of extensions: 1133901
Number of successful extensions: 4607
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 4565
Number of HSP's successfully gapped: 25
Length of query: 334
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 232
Effective length of database: 12,553,887
Effective search space: 2912501784
Effective search space used: 2912501784
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009193
(1004 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001122404.1| cytochrome P450 4F11 [Homo sapiens]. 455 e-128
Alignment gi|NP_067010.3| cytochrome P450 4F11 [Homo sapiens]. 455 e-128
Alignment gi|NP_001073.3| leukotriene-B(4) omega-hydroxylase 1 [Homo sapi... 451 e-127
Alignment gi|NP_001186138.1| leukotriene-B(4) omega-hydroxylase 2 isoform... 447 e-126
Alignment gi|NP_001186137.1| leukotriene-B(4) omega-hydroxylase 2 isoform... 447 e-126
Alignment gi|NP_009184.1| cytochrome P450 4F8 [Homo sapiens]. 413 e-115
Alignment gi|NP_076433.3| cytochrome P450 4F12 [Homo sapiens]. 407 e-114
Alignment gi|NP_000887.2| leukotriene-B(4) omega-hydroxylase 2 isoform a ... 401 e-112
Alignment gi|NP_775754.2| cytochrome P450 4F22 [Homo sapiens]. 314 9e-86
Alignment gi|NP_828847.1| cytochrome P450 4X1 [Homo sapiens]. 175 5e-44
>ref|NP_001122404.1| cytochrome P450 4F11 [Homo sapiens].
Length = 524
Score = 455 bits (1170), Expect = e-128
Identities = 218/292 (74%), Positives = 237/292 (81%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLSWLGLGPV ASPW ARVL WT T DN RRL+ FPQPPK NW
Sbjct: 1 MPQLSLSWLGLGPVAASPWLLLLLVGGSWLLARVLAWTYTFYDNCRRLQCFPQPPKQNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH G V PTEEGM LTQ++ TYP GF +W+GP P+++LCHPD+IR + +ASAAVAPK
Sbjct: 61 WGHQGLVTPTEEGMKTLTQLVTTYPQGFKLWLGPTFPLLILCHPDIIRPITSASAAVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D++FY FLKPWLGDGLLLS GDKWS HRRMLTPAFHFNILKPYMKIFN SVN+MH KWQR
Sbjct: 121 DMIFYGFLKPWLGDGLLLSGGDKWSRHRRMLTPAFHFNILKPYMKIFNKSVNIMHDKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L +EG RLDMFEHISLMTLDSLQKCVFSF+SNCQEKPSEYIAAILELSA V KR+QQI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFESNCQEKPSEYIAAILELSAFVEKRNQQIL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH DFLYYLTPDG RF AC LVHDFTDAVIQERR TLPT+GIDDFL+ K
Sbjct: 241 LHTDFLYYLTPDGQRFRRACHLVHDFTDAVIQERRCTLPTQGIDDFLKNKAK 292
>ref|NP_067010.3| cytochrome P450 4F11 [Homo sapiens].
Length = 524
Score = 455 bits (1170), Expect = e-128
Identities = 218/292 (74%), Positives = 237/292 (81%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLSWLGLGPV ASPW ARVL WT T DN RRL+ FPQPPK NW
Sbjct: 1 MPQLSLSWLGLGPVAASPWLLLLLVGGSWLLARVLAWTYTFYDNCRRLQCFPQPPKQNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH G V PTEEGM LTQ++ TYP GF +W+GP P+++LCHPD+IR + +ASAAVAPK
Sbjct: 61 WGHQGLVTPTEEGMKTLTQLVTTYPQGFKLWLGPTFPLLILCHPDIIRPITSASAAVAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D++FY FLKPWLGDGLLLS GDKWS HRRMLTPAFHFNILKPYMKIFN SVN+MH KWQR
Sbjct: 121 DMIFYGFLKPWLGDGLLLSGGDKWSRHRRMLTPAFHFNILKPYMKIFNKSVNIMHDKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L +EG RLDMFEHISLMTLDSLQKCVFSF+SNCQEKPSEYIAAILELSA V KR+QQI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFESNCQEKPSEYIAAILELSAFVEKRNQQIL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH DFLYYLTPDG RF AC LVHDFTDAVIQERR TLPT+GIDDFL+ K
Sbjct: 241 LHTDFLYYLTPDGQRFRRACHLVHDFTDAVIQERRCTLPTQGIDDFLKNKAK 292
>ref|NP_001073.3| leukotriene-B(4) omega-hydroxylase 1 [Homo sapiens].
Length = 520
Score = 451 bits (1161), Expect = e-127
Identities = 215/292 (73%), Positives = 238/292 (81%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLSWLGL PV ASPW A VL WT DN RRLR FPQPP+ NW
Sbjct: 1 MSQLSLSWLGLWPVAASPWLLLLLVGASWLLAHVLAWTYAFYDNCRRLRCFPQPPRRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH G V PTEEGM LTQ++ TYP GF +WMGPI+P++ LCHPD+IR++ NASAA+APK
Sbjct: 61 WGHQGMVNPTEEGMRVLTQLVATYPQGFKVWMGPISPLLSLCHPDIIRSVINASAAIAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D FY FL+PWLGDGLLLSAGDKWS HRRMLTPAFHFNILKPYMKIFN+SVN+MHAKWQ
Sbjct: 121 DKFFYSFLEPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIFNESVNIMHAKWQL 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L +EG LDMFEHISLMTLDSLQKCVFSFDS+CQEKPSEYIAAILELSALV+KRH +I
Sbjct: 181 LASEGSACLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYIAAILELSALVSKRHHEIL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
LH+DFLYYLTPDG RF ACRLVHDFTDAVIQERR TLP++G+DDFL+ K
Sbjct: 241 LHIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDDFLQAKAK 292
>ref|NP_001186138.1| leukotriene-B(4) omega-hydroxylase 2 isoform b [Homo sapiens].
Length = 520
Score = 447 bits (1151), Expect = e-126
Identities = 215/292 (73%), Positives = 239/292 (81%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLS LGL P+ ASPW AR+L WT T DN RLR FPQPPK NW
Sbjct: 1 MPQLSLSSLGLWPMAASPWLLLLLVGASWLLARILAWTYTFYDNCCRLRCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGH+G V PTE+GM LTQ++ TYP GF +WMGPI P+I CHP++IR++ NASAA+ PK
Sbjct: 61 LGHLGLVTPTEQGMRVLTQLVATYPQGFKVWMGPIFPVIRFCHPNIIRSVINASAAIVPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D VFY FLKPWLGDGLLLSAG+KWS HRRMLTPAFHFNILKPYMKIFN+SVN+MHAKWQ
Sbjct: 121 DKVFYSFLKPWLGDGLLLSAGEKWSRHRRMLTPAFHFNILKPYMKIFNESVNIMHAKWQL 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L +EG RLDMFEHISLMTLDSLQKCVFSFDS+CQEKPSEYIAAILELSALV KRHQQI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYIAAILELSALVTKRHQQIL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
L++DFLYYLTPDG RF ACRLVHDFTDAVIQERR TLP++G+DDFL+ K
Sbjct: 241 LYIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDDFLQAKAK 292
>ref|NP_001186137.1| leukotriene-B(4) omega-hydroxylase 2 isoform b [Homo sapiens].
Length = 520
Score = 447 bits (1151), Expect = e-126
Identities = 215/292 (73%), Positives = 239/292 (81%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLS LGL P+ ASPW AR+L WT T DN RLR FPQPPK NW
Sbjct: 1 MPQLSLSSLGLWPMAASPWLLLLLVGASWLLARILAWTYTFYDNCCRLRCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGH+G V PTE+GM LTQ++ TYP GF +WMGPI P+I CHP++IR++ NASAA+ PK
Sbjct: 61 LGHLGLVTPTEQGMRVLTQLVATYPQGFKVWMGPIFPVIRFCHPNIIRSVINASAAIVPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D VFY FLKPWLGDGLLLSAG+KWS HRRMLTPAFHFNILKPYMKIFN+SVN+MHAKWQ
Sbjct: 121 DKVFYSFLKPWLGDGLLLSAGEKWSRHRRMLTPAFHFNILKPYMKIFNESVNIMHAKWQL 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L +EG RLDMFEHISLMTLDSLQKCVFSFDS+CQEKPSEYIAAILELSALV KRHQQI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYIAAILELSALVTKRHQQIL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
L++DFLYYLTPDG RF ACRLVHDFTDAVIQERR TLP++G+DDFL+ K
Sbjct: 241 LYIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDDFLQAKAK 292
>ref|NP_009184.1| cytochrome P450 4F8 [Homo sapiens].
Length = 520
Score = 413 bits (1062), Expect = e-115
Identities = 198/292 (67%), Positives = 225/292 (77%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M LSLSWLGL PV ASPW AR+L WT N RRLR FPQP K NW
Sbjct: 1 MSLLSLSWLGLRPVAASPWLLLLVVGASWLLARILAWTYAFYHNGRRLRCFPQPRKQNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGH+G V PTEEG+ LTQ++ TYP GF+ W+GPITPII LCHPD++R++ N S A+ K
Sbjct: 61 LGHLGLVTPTEEGLRVLTQLVATYPQGFVRWLGPITPIINLCHPDIVRSVINTSDAITDK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D+VFY LKPWLGDGLLLS GDKW HRR+LTPAFHFNILKPY+KIF+ S N+MHAKWQR
Sbjct: 121 DIVFYKTLKPWLGDGLLLSVGDKWRHHRRLLTPAFHFNILKPYIKIFSKSANIMHAKWQR 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L EG LD+FEHISLMTLDSLQKC+FSFDSNCQEKPSEYI AI+ELSALV KR+ Q F
Sbjct: 181 LAMEGSTCLDVFEHISLMTLDSLQKCIFSFDSNCQEKPSEYITAIMELSALVVKRNNQFF 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
+ DFLY+LTP G RF ACRLVHDFTDAVIQERR TL ++G+DDFL+ K
Sbjct: 241 RYKDFLYFLTPCGRRFHRACRLVHDFTDAVIQERRRTLTSQGVDDFLQAKAK 292
>ref|NP_076433.3| cytochrome P450 4F12 [Homo sapiens].
Length = 524
Score = 407 bits (1046), Expect = e-114
Identities = 195/292 (66%), Positives = 221/292 (75%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M LSL WLGL PV SPW AR+L WT +N RRL+ FPQPPK NW
Sbjct: 1 MSLLSLPWLGLRPVATSPWLLLLLVVGSWLLARILAWTYAFYNNCRRLQCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
GH+G + PTEEG+ TQM TY GF +W+GPI P IVLCHPD IR++ NASAA+APK
Sbjct: 61 WGHLGLITPTEEGLKNSTQMSATYSQGFTVWLGPIIPFIVLCHPDTIRSITNASAAIAPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D +F FLKPWLG+G+LLS GDKWS HRRMLTPAFHFNILK Y+ IFN S N+M KWQ
Sbjct: 121 DNLFIRFLKPWLGEGILLSGGDKWSRHRRMLTPAFHFNILKSYITIFNKSANIMLDKWQH 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L +EG +RLDMFEHISLMTLDSLQKC+FSFDS+CQE+PSEYIA ILELSALV KR Q I
Sbjct: 181 LASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQERPSEYIATILELSALVEKRSQHIL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
H+DFLYYL+ DG RF ACRLVHDFTDAVI+ERR TLPT+GIDDF + K
Sbjct: 241 QHMDFLYYLSHDGRRFHRACRLVHDFTDAVIRERRRTLPTQGIDDFFKDKAK 292
>ref|NP_000887.2| leukotriene-B(4) omega-hydroxylase 2 isoform a [Homo sapiens].
Length = 520
Score = 401 bits (1031), Expect = e-112
Identities = 198/292 (67%), Positives = 224/292 (76%)
Frame = +1
Query: 88 MLQLSLSWLGLGPVEASPWXXXXXXXXXXXXARVLVWTCTSLDNVRRLRGFPQPPKPNWL 267
M QLSLS LGL P+ ASPW AR+L WT T DN RLR FPQPPK NW
Sbjct: 1 MPQLSLSSLGLWPMAASPWLLLLLVGASWLLARILAWTYTFYDNCCRLRCFPQPPKRNWF 60
Query: 268 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 447
LGH+G + +EEG+ + T+ + W+GP I+ + HP I+ + A AA+ PK
Sbjct: 61 LGHLGLIHSSEEGLLYTQSLACTFGDMCCWWVGPWHAIVRIFHPTYIKPVLFAPAAIVPK 120
Query: 448 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 627
D VFY FLKPWLGDGLLLSAG+KWS HRRMLTPAFHFNILKPYMKIFN+SVN+MHAKWQ
Sbjct: 121 DKVFYSFLKPWLGDGLLLSAGEKWSRHRRMLTPAFHFNILKPYMKIFNESVNIMHAKWQL 180
Query: 628 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 807
L +EG RLDMFEHISLMTLDSLQKCVFSFDS+CQEKPSEYIAAILELSALV KRHQQI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYIAAILELSALVTKRHQQIL 240
Query: 808 LHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDDFLRPXLK 963
L++DFLYYLTPDG RF ACRLVHDFTDAVIQERR TLP++G+DDFL+ K
Sbjct: 241 LYIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDDFLQAKAK 292
>ref|NP_775754.2| cytochrome P450 4F22 [Homo sapiens].
Length = 531
Score = 314 bits (804), Expect = 9e-86
Identities = 147/243 (60%), Positives = 185/243 (76%)
Frame = +1
Query: 223 RRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPD 402
RRLR FPQPP+ NWLLGH+G P E G+ ++++ + ++WMGP+ P++VL HPD
Sbjct: 54 RRLRCFPQPPRRNWLLGHLGMYLPNEAGLQDEKKVLDNMHHVLLVWMGPVLPLLVLVHPD 113
Query: 403 LIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMK 582
I+ + ASAA+APKD +FY FLKPWLGDGLLLS GDKWS HRR+LTPAFHF+ILKPYMK
Sbjct: 114 YIKPLLGASAAIAPKDDLFYGFLKPWLGDGLLLSKGDKWSRHRRLLTPAFHFDILKPYMK 173
Query: 583 IFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAI 762
IFN S ++MHAKW+ L LDMFEHISLMTLDSLQKCVFS++SNCQEK S+YI+AI
Sbjct: 174 IFNQSADIMHAKWRHLAEGSAVSLDMFEHISLMTLDSLQKCVFSYNSNCQEKMSDYISAI 233
Query: 763 LELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTLPTEGIDD 942
+ELSAL +R ++ +LDF+YY + DG RF AC +VH FT VIQERR L +G +
Sbjct: 234 IELSALSVRRQYRLHHYLDFIYYRSADGRRFRQACDMVHHFTTEVIQERRRALRQQGAEA 293
Query: 943 FLR 951
+L+
Sbjct: 294 WLK 296
>ref|NP_828847.1| cytochrome P450 4X1 [Homo sapiens].
Length = 509
Score = 175 bits (444), Expect = 5e-44
Identities = 88/236 (37%), Positives = 135/236 (57%), Gaps = 2/236 (0%)
Frame = +1
Query: 220 VRRLRGFPQPPKPNWLLGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHP 399
+R LR FP PP +W LGH + ++ M KL +++ YP F W+GP + P
Sbjct: 40 LRDLRPFPAPPT-HWFLGHQKFIQ--DDNMEKLEEIIEKYPRAFPFWIGPFQAFFCIYDP 96
Query: 400 DLIRTMANASAAVAPKDVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYM 579
D +T+ + + PK F P LG GL G KW HRR+LTP FHFNILK Y+
Sbjct: 97 DYAKTLLSRTD---PKSQYLQKFSPPLLGKGLAALDGPKWFQHRRLLTPGFHFNILKAYI 153
Query: 580 KIFNDSVNVMHAKWQRLVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSE--YI 753
++ SV +M KW+++ + ++++EHI+ M+LD + KC FS ++NCQ + Y
Sbjct: 154 EVMAHSVKMMLDKWEKICSTQDTSVEVYEHINSMSLDIIMKCAFSKETNCQTNSTHDPYA 213
Query: 754 AAILELSALVAKRHQQIFLHLDFLYYLTPDGWRFP*ACRLVHDFTDAVIQERRNTL 921
AI ELS ++ R + H D ++ L+P G+RF R+++ +TD +IQER+ +L
Sbjct: 214 KAIFELSKIIFHRLYSLLYHSDIIFKLSPQGYRFQKLSRVLNQYTDTIIQERKKSL 269
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,654,922
Number of extensions: 1363533
Number of successful extensions: 5560
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 5517
Number of HSP's successfully gapped: 16
Length of query: 334
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 231
Effective length of database: 14,901,872
Effective search space: 3442332432
Effective search space used: 3442332432
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009193
(1004 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 464 e-128
>Sscrofa_Chr02
|| Length = 162569375
Score = 464 bits (234), Expect = e-128
Identities = 267/273 (97%), Gaps = 4/273 (1%)
Strand = Plus / Minus
Query: 735 gaagcctagtgaatatattgctgccatcttggagctcagtgctcttgtggcaaaacggca 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61350288 gaagcctagtgaatatattgctgccatcttggagctcagtgctcttgtggcaaaacggca 61350229
Query: 795 ccagcagatcttcctgcacctggacttcctgtactacctcacccctgatgggtggcgctt 854
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61350228 ccagcagatcttcctgcacctggacttcctgtactacctcacccctgatgggtggcgc-t 61350170
Query: 855 tccataa-gcctgccgcctagttcacgacttcacagatgccgtcatccaggagcggcgca 913
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61350169 tccataaggcctgccgcctagttcacgacttcacagatgccgtcatccaggagcggcgca 61350110
Query: 914 acacccttcccacagagggcattgatgacttcctc-aggccaangctaaagct-aaactt 971
||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||
Sbjct: 61350109 acacccttcccacagagggcattgatgacttcctcaaggccaaggctaaggctaaaactt 61350050
Query: 972 tggacatcattgatgtgctcctgctgaccaagg 1004
|||||||||||||||||||||||||||||||||
Sbjct: 61350049 tggacatcattgatgtgctcctgctgaccaagg 61350017
Score = 402 bits (203), Expect = e-109
Identities = 203/203 (100%)
Strand = Plus / Minus
Query: 85 aggatgctgcagctgagcctatcctggctgggactggggccagtggaagcctcaccatgg 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61358718 aggatgctgcagctgagcctatcctggctgggactggggccagtggaagcctcaccatgg 61358659
Query: 145 ctactcctgctcctggttggggcttcctggctcctggcccgagtcctggtctggacctgc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61358658 ctactcctgctcctggttggggcttcctggctcctggcccgagtcctggtctggacctgc 61358599
Query: 205 acctcccttgacaatgttcgccgcctccgaggtttcccgcagcctccaaaaccgaactgg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61358598 acctcccttgacaatgttcgccgcctccgaggtttcccgcagcctccaaaaccgaactgg 61358539
Query: 265 ctcttgggtcacatgggccaggt 287
|||||||||||||||||||||||
Sbjct: 61358538 ctcttgggtcacatgggccaggt 61358516
Score = 258 bits (130), Expect = 5e-66
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 484 ggggatgggctcctgctgagtgctggtgacaagtggagcagccaccgtcgcatgctgaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61353387 ggggatgggctcctgctgagtgctggtgacaagtggagcagccaccgtcgcatgctgaca 61353328
Query: 544 cctgccttccacttcaacatcctgaagccctacatgaagattttcaatgacagcgtgaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61353327 cctgccttccacttcaacatcctgaagccctacatgaagattttcaatgacagcgtgaat 61353268
Query: 604 gtcatgcatg 613
||||||||||
Sbjct: 61353267 gtcatgcatg 61353258
Score = 254 bits (128), Expect = 8e-65
Identities = 134/136 (98%)
Strand = Plus / Minus
Query: 295 acggaggagggcatgacaaaactcactcagatgatgaacacctaccccaatggatttatg 354
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61356673 acggaggagggcatgacaaaactcactcagatgatgaacacataccccaatggatttatg 61356614
Query: 355 atttggatgggccccatcactcccatcattgttttgtgccatcctgacttgatccggact 414
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61356613 atctggatgggccccatcactcccatcattgttttgtgccatcctgacttgatccggact 61356554
Query: 415 atggccaatgcctcag 430
||||||||||||||||
Sbjct: 61356553 atggccaatgcctcag 61356538
Score = 244 bits (123), Expect = 8e-62
Identities = 123/123 (100%)
Strand = Plus / Minus
Query: 613 gccaagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatc 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61351175 gccaagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatc 61351116
Query: 673 agcctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacagcaattgccaa 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61351115 agcctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacagcaattgccaa 61351056
Query: 733 gag 735
|||
Sbjct: 61351055 gag 61351053
Score = 163 bits (82), Expect = 2e-37
Identities = 148/170 (87%)
Strand = Plus / Plus
Query: 742 agtgaatatattgctgccatcttggagctcagtgctcttgtggcaaaacggcaccagcag 801
|||||||| |||||||| |||| ||||||||||| || ||| |||||||| | |||||
Sbjct: 61532143 agtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaatgagcag 61532202
Query: 802 atcttcctgcacctggacttcctgtactacctcacccctgatgggtggcgctttccataa 861
|||||||||||| |||||||||||||||||||||||| || ||| ||||||| | |
Sbjct: 61532203 atcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgcttccgcaag 61532262
Query: 862 gcctgccgcctagttcacgacttcacagatgccgtcatccaggagcggcg 911
||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 61532263 gcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcg 61532312
Score = 163 bits (82), Expect = 2e-37
Identities = 148/170 (87%)
Strand = Plus / Plus
Query: 742 agtgaatatattgctgccatcttggagctcagtgctcttgtggcaaaacggcaccagcag 801
|||||||| |||||||| |||| ||||||||||| || ||| |||||||| | |||||
Sbjct: 61533620 agtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaatgagcag 61533679
Query: 802 atcttcctgcacctggacttcctgtactacctcacccctgatgggtggcgctttccataa 861
|||||||||||| |||||||||||||||||||||||| || ||| ||||||| | |
Sbjct: 61533680 atcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgcttccgcaag 61533739
Query: 862 gcctgccgcctagttcacgacttcacagatgccgtcatccaggagcggcg 911
||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 61533740 gcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcg 61533789
Score = 161 bits (81), Expect = 9e-37
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 7 agttcagagataaggacaggaaagaagactccctaggaagaggacagaagtttcggggga 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61359133 agttcagagataaggacaggaaagaagactccctaggaagaggacagaagtttcggggga 61359074
Query: 67 ttaagtgctccagacagaagg 87
|||||||||||||||||||||
Sbjct: 61359073 ttaagtgctccagacagaagg 61359053
Score = 157 bits (79), Expect = 1e-35
Identities = 109/119 (91%)
Strand = Plus / Minus
Query: 613 gccaagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatc 672
|||||||||||||| ||| | |||| ||||||| |||| ||||||||||||||||||||
Sbjct: 61478976 gccaagtggcagcgcttggcctcagaaggccacacccgtctggacatgtttgaacacatc 61478917
Query: 673 agcctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacagcaattgcca 731
||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 61478916 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgcca 61478858
Score = 157 bits (79), Expect = 1e-35
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 613 gccaagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatc 672
||||||||||||| ||| | |||||||||||| |||| ||||||||||||||||||||
Sbjct: 61531272 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 61531331
Query: 673 agcctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacagcaattgcca 731
||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 61531332 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgcca 61531390
Score = 157 bits (79), Expect = 1e-35
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 613 gccaagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatc 672
||||||||||||| ||| | |||||||||||| |||| ||||||||||||||||||||
Sbjct: 61647676 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 61647735
Query: 673 agcctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacagcaattgcca 731
||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 61647736 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgcca 61647794
Score = 155 bits (78), Expect = 6e-35
Identities = 147/170 (86%)
Strand = Plus / Minus
Query: 742 agtgaatatattgctgccatcttggagctcagtgctcttgtggcaaaacggcaccagcag 801
|||||||||||| |||||||||| | |||||||| || ||| ||||||| | |||||
Sbjct: 61503942 agtgaatatattactgccatcttagcactcagtgccctggtgataaaacggtgcgagcag 61503883
Query: 802 atcttcctgcacctggacttcctgtactacctcacccctgatgggtggcgctttccataa 861
|||||||||||| |||||||||||||||||||||||| || ||| ||||||| | |
Sbjct: 61503882 atcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgcttccgcaag 61503823
Query: 862 gcctgccgcctagttcacgacttcacagatgccgtcatccaggagcggcg 911
||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 61503822 gcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcg 61503773
Score = 149 bits (75), Expect = 3e-33
Identities = 108/119 (90%)
Strand = Plus / Minus
Query: 613 gccaagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatc 672
|||||||||||||| ||| | |||| ||||||| |||| |||| |||||||||||||||
Sbjct: 61538974 gccaagtggcagcgcttggcctcagaaggccacacccgtctggagatgtttgaacacatc 61538915
Query: 673 agcctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacagcaattgcca 731
||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 61538914 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgcca 61538856
Score = 129 bits (65), Expect = 3e-27
Identities = 97/108 (89%)
Strand = Plus / Minus
Query: 615 caagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatcag 674
|||||||||||| ||| | |||| || |||| |||| |||| |||||||||||||||||
Sbjct: 61540305 caagtggcagcgcttggcctcagaaggncacacccgtctggagatgtttgaacacatcag 61540246
Query: 675 cctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacag 722
||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 61540245 cctcatgactctggacagtctgcagaaatgtgtcttcagttttgacag 61540198
Score = 121 bits (61), Expect = 8e-25
Identities = 142/168 (84%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 742 agtgaatatattgctgccatcttggagctcagtgctcttgtggcaaaacggcaccagcag 801
|||||||||||| |||||||||| | |||||||| || ||| ||| ||| | |||||
Sbjct: 61538103 agtgaatatattactgccatcttagcactcagtgccctggtgataaa-cggtgcgagcag 61538045
Query: 802 atcttcctgcacctggacttcctgtactacctcacccctgatgggtggcgctttccataa 861
|||||||||||| |||||||||||||||||||||||| || ||| |||||| || |
Sbjct: 61538044 atcttcctgcacanggacttcctgtactacctcacccccgaaggggagcgcttcccgcag 61537985
Query: 862 gcctgccgcctagttcacgacttcacagatgccgtcatccaggagcgg 909
|||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 61537984 gcctgcggcctggtgcacaacttcacagatgccgtcatccaggagcgg 61537937
Score = 117 bits (59), Expect = 1e-23
Identities = 59/59 (100%)
Strand = Plus / Minus
Query: 427 tcagctgccgtcgcacccaaggatgtggtcttctacgactttctgaagccctggctggg 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61353536 tcagctgccgtcgcacccaaggatgtggtcttctacgactttctgaagccctggctggg 61353478
Score = 103 bits (52), Expect = 2e-19
Identities = 94/108 (87%)
Strand = Plus / Plus
Query: 85 aggatgctgcagctgagcctatcctggctgggactggggccagtggaagcctcaccatgg 144
|||||||||||||||||||| |||||||||||||||||||| ||| |||||| || |||
Sbjct: 61637437 aggatgctgcagctgagcctgtcctggctgggactggggcctgtgtcagcctccccgtgg 61637496
Query: 145 ctactcctgctcctggttggggcttcctggctcctggcccgagtcctg 192
|| ||||||| ||||| || ||| ||||||||||| ||||| |||||
Sbjct: 61637497 ctgctcctgcagctggtcggtgctacctggctcctgtcccgaatcctg 61637544
Score = 95.6 bits (48), Expect = 4e-17
Identities = 93/108 (86%)
Strand = Plus / Plus
Query: 85 aggatgctgcagctgagcctatcctggctgggactggggccagtggaagcctcaccatgg 144
|||||||||||||||||||| |||||||||||||||||||| ||| |||||| || |||
Sbjct: 61441936 aggatgctgcagctgagcctgtcctggctgggactggggcctgtgtcagcctccccgtgg 61441995
Query: 145 ctactcctgctcctggttggggcttcctggctcctggcccgagtcctg 192
|| || |||| ||||| || ||| ||||||||||| ||||| |||||
Sbjct: 61441996 ctgcttctgcagctggtcggtgctacctggctcctgtcccgaatcctg 61442043
Score = 93.7 bits (47), Expect = 2e-16
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 484 ggggatgggctcctgctgagtgctggtgacaagtggagcagccaccgtcgcatgctgaca 543
|||| |||||||||||||||||||||||| ||||||||| ||| || ||| ||||||||
Sbjct: 61470792 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 61470851
Query: 544 cctgccttccacttcaacatcctgaagccctacatgaagattttcaa 590
|||||||||||||| | ||| ||||| | || |||||||||||||
Sbjct: 61470852 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaa 61470898
Score = 93.7 bits (47), Expect = 2e-16
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 484 ggggatgggctcctgctgagtgctggtgacaagtggagcagccaccgtcgcatgctgaca 543
|||| |||||||||||||||||||||||| ||||||||| ||| || ||| ||||||||
Sbjct: 61548131 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 61548072
Query: 544 cctgccttccacttcaacatcctgaagccctacatgaagattttcaa 590
|||||||||||||| | ||| ||||| | || |||||||||||||
Sbjct: 61548071 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaa 61548025
Score = 93.7 bits (47), Expect = 2e-16
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 508 ggtgacaagtggagcagccaccgtcgcatgctgacacctgccttccacttcaacatcctg 567
||||||||||||||| | ||||| || ||||||||||||||||||||||| |||| ||
Sbjct: 61615981 ggtgacaagtggagccggcaccgccgtatgctgacacctgccttccactttgacattcta 61616040
Query: 568 aagccctacatgaagattttcaa 590
||||||||||||||||| |||||
Sbjct: 61616041 aagccctacatgaagatattcaa 61616063
Score = 93.7 bits (47), Expect = 2e-16
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 484 ggggatgggctcctgctgagtgctggtgacaagtggagcagccaccgtcgcatgctgaca 543
|||| |||||||||||||||||||||||| ||||||||| ||| || ||| ||||||||
Sbjct: 61645719 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 61645778
Query: 544 cctgccttccacttcaacatcctgaagccctacatgaagattttcaa 590
|||||||||||||| | ||| ||||| | || |||||||||||||
Sbjct: 61645779 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaa 61645825
Score = 89.7 bits (45), Expect = 3e-15
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 655 gacatgtttgaacacatcagcctcatgaccctggacagtctgcagaaatgtgtcttcagc 714
||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61616344 gacatgtttgagcatgtcagcctcatgaccctggacagtcttcagaaatgtgtcttcagc 61616403
Query: 715 t 715
|
Sbjct: 61616404 t 61616404
Score = 87.7 bits (44), Expect = 1e-14
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 85 aggatgctgcagctgagcctatcctggctgggactggggccagtggaagcctcaccatgg 144
|||||| ||||||||||||| |||||||| ||||||||||| ||| |||||| || |||
Sbjct: 61555626 aggatgttgcagctgagcctgtcctggctaggactggggcctgtgtcagcctccccgtgg 61555567
Query: 145 ctactcctgctcctggttggggcttcctggctcctggcccgagtcctg 192
|| ||||||| ||||| || ||| ||||||||||| ||||| |||||
Sbjct: 61555566 ctgctcctgcagctggtcggtgctacctggctcctgtcccgaatcctg 61555519
Score = 73.8 bits (37), Expect = 2e-10
Identities = 98/112 (87%), Gaps = 5/112 (4%)
Strand = Plus / Plus
Query: 613 gccaagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatc 672
||||||||||||| ||| | |||||||||||| |||| |||||||||| | |||||||
Sbjct: 61478053 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgttng-acacatc 61478111
Query: 673 agcctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacagca 724
|| |||||||| |||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 61478112 ag-ctcatgactctggac-gtctgcag-aatgtgtcttcag-tttgacagca 61478159
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,588,595
Number of extensions: 183
Number of successful extensions: 183
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 178
Number of HSP's successfully gapped: 28
Length of query: 1004
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 983
Effective length of database: 2,808,413,156
Effective search space: 2760670132348
Effective search space used: 2760670132348
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)