Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009405
(1878 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001095372.1| phosphodiesterase 4D interacting protein [Bo... 850 0.0
Alignment gi|NP_001179054.1| Golgin subfamily A member 4 [Bos taurus]. 67 4e-11
Alignment gi|XP_002696957.1| PREDICTED: golgi autoantigen, golgin subfami... 67 4e-11
Alignment gi|XP_002692496.1| PREDICTED: centrosomal protein 250kDa [Bos t... 66 1e-10
Alignment gi|XP_002684342.1| PREDICTED: centrosomal protein 250kDa [Bos t... 66 1e-10
Alignment gi|NP_001107627.1| RB1-inducible coiled-coil protein 1 [Bos tau... 62 2e-09
Alignment gi|NP_777259.1| myosin-10 [Bos taurus]. 61 3e-09
Alignment gi|XP_002688141.1| PREDICTED: centromere protein E, 312kDa [Bos... 59 1e-08
Alignment gi|XP_002704562.1| PREDICTED: centromere protein E [Bos taurus]. 59 1e-08
Alignment gi|XP_002690549.1| PREDICTED: myosin, heavy polypeptide 6, card... 59 2e-08
>ref|NP_001095372.1| phosphodiesterase 4D interacting protein [Bos taurus].
Length = 1116
Score = 850 bits (2196), Expect = 0.0
Identities = 451/568 (79%), Positives = 479/568 (84%)
Frame = +3
Query: 174 MEVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS 353
+ VQP MTE+LLKQQKLNS+ET TQQSVSDSHLAELQEKIQQTE TNK+LQEKLNEMS
Sbjct: 371 LRVQP--MTEDLLKQQKLNSNETGTTQQSVSDSHLAELQEKIQQTETTNKMLQEKLNEMS 428
Query: 354 CELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQL 533
EL TIQ+ KETLKSRESETEELYQVIEGQN+TMAKLREMLHQSQL QL
Sbjct: 429 YELKSAQESSQKQDDTIQNLKETLKSRESETEELYQVIEGQNDTMAKLREMLHQSQLKQL 488
Query: 534 HTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXX 713
H SEGTSPAQQQVALLDLQSALFCSQLEIQKLQR VRQKERQL DA+RCVRFV
Sbjct: 489 HNSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRAVRQKERQLADARRCVRFVEAAAQER 548
Query: 714 XXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHK 893
SWKHNQEL+KALQQLQGELQ+KSQQLHTLEAEK N IR QEQHIQHL++SLSHK
Sbjct: 549 EQQKEASWKHNQELQKALQQLQGELQSKSQQLHTLEAEKYNEIRTQEQHIQHLHYSLSHK 608
Query: 894 XXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXX 1073
YR+NSDKTL+ANEMLLEKLRQRIQDRDVALERAID
Sbjct: 609 EQLLQEFRELLQYRNNSDKTLEANEMLLEKLRQRIQDRDVALERAIDEKFSSLEEKEKEL 668
Query: 1074 RQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEME 1253
RQLHLA+RERDHDLERLRG+LS+NEAT+QSMESLLR+KGLEVEQLSATCQNLQWL+EEME
Sbjct: 669 RQLHLAMRERDHDLERLRGILSANEATMQSMESLLRSKGLEVEQLSATCQNLQWLKEEME 728
Query: 1254 TKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERM 1433
TKFS WQKEQESIIQQLQTSLHDRNKEVEDL+ATLLCKLGPGQ+EI EELCQRLQ+KERM
Sbjct: 729 TKFSRWQKEQESIIQQLQTSLHDRNKEVEDLTATLLCKLGPGQTEIVEELCQRLQQKERM 788
Query: 1434 LQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGG 1613
LQDLLSDRNKQAVEYEMEIQGLLQSMSTREQES AAAEKMVQALMERNSELQALRQYLGG
Sbjct: 789 LQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESHAAAEKMVQALMERNSELQALRQYLGG 848
Query: 1614 KDFTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDL 1793
KDF MSQA +SNRPAEVTSISPHLGEQTDQG +HIPSRDDSTSLTAKGDAS+PRSS G++
Sbjct: 849 KDFMMSQAPLSNRPAEVTSISPHLGEQTDQGSVHIPSRDDSTSLTAKGDASVPRSSLGEV 908
Query: 1794 DTVTGXXXXXXXXXXXXXXMAKKREKSR 1877
DTV G MAKK +SR
Sbjct: 909 DTVAGLEKELSNAKEELELMAKKERESR 936
>ref|NP_001179054.1| Golgin subfamily A member 4 [Bos taurus].
Length = 2229
Score = 67.4 bits (163), Expect = 4e-11
Identities = 103/548 (18%), Positives = 213/548 (38%), Gaps = 71/548 (12%)
Frame = +3
Query: 171 DMEVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEM 350
+M+ + + +KQ +E ++ + EL++ + + T + ++ EM
Sbjct: 377 EMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEM 436
Query: 351 SCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLG- 527
++ +Q +K +E+ V + +E +AKL++ LH+ +L
Sbjct: 437 DEQIKAIEKASEEERVRLQQELSCVK------QEVVDVTKKSSEQIAKLQK-LHEKELAS 489
Query: 528 -------QLHTSEGTSPAQQQVAL-------------LDLQSALFCSQLEIQKLQRVVRQ 647
+L T E Q ++AL D Q +L +LE+QK + ++ +
Sbjct: 490 KEQELTKKLQTQETEFQEQMRIALEKSQSEYLKITQEKDQQESLALEELELQK-KAILTE 548
Query: 648 KERQLTDAKRCVRFVXXXXXXXXXXXXXSW-------------------KHNQELRKALQ 770
E +L D K+ S KHN+E+ ++
Sbjct: 549 SENKLRDLKQEAETYRTRILELESSLEKSLQENKNQSEDLTSHLEAEKNKHNKEITIMVE 608
Query: 771 QLQGELQNKSQQLHTLEAEKCNAIRIQEQ-HIQHLNHSLSH------KXXXXXXXXXXXX 929
+ + EL++ Q + EK ++ Q Q ++ L K
Sbjct: 609 KHKTELESLQHQQDNIWTEKLQVLKQQHQTEMEELREKYEQEKETLVKDRETLFQAHIEE 668
Query: 930 YRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRE-RD 1106
+ + + LD + LE L + + ++ + ++L + E ++
Sbjct: 669 MNEKTLEKLDVKQTELESLSSELSEVLKTRDKLEEELSVLKDQADRVKQELEAKLDEQKN 728
Query: 1107 HDLERLRGVLSSNEATIQSMESLLRAK----GLEVEQLSATCQNLQWLREEMET--KFSH 1268
H +++ ++ E +IQ E L+ + GL +++ + Q E +E K S
Sbjct: 729 HHQQQVDNIIKEQEISIQRTEKALKDEINQLGLLLKEKDRHLKEHQARVESLEADIKRSE 788
Query: 1269 WQKEQES----IIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSE-------IAE------ 1397
+ +Q S + Q LQ + H++ K E+ A L +L ++E +AE
Sbjct: 789 GELQQASTKLELFQSLQNTTHEQAKVHEEQLAQLQQQLLDLETERILLTKQVAEVEAQKK 848
Query: 1398 ELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERN 1577
++C L + +QDLL KQ E E +++ L Q ++ +++ E+ Q LME+
Sbjct: 849 DVCAELDAHKIQVQDLLQKLEKQNREMEEKVKSLTQLSESQLKDNNTEQEQRKQLLMEKE 908
Query: 1578 SELQALRQ 1601
+ + +R+
Sbjct: 909 NVILQMRE 916
Score = 50.1 bits (118), Expect = 7e-06
Identities = 94/498 (18%), Positives = 203/498 (40%), Gaps = 29/498 (5%)
Frame = +3
Query: 189 VTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXX 368
+T +E L++Q DE + + + H+AE + I Q ++++ + +
Sbjct: 311 LTSEKEALQEQL---DERLQELEKMKELHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAE 367
Query: 369 XXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLG------- 527
T + ETL+ +E E +L I+ +LRE +S+
Sbjct: 368 ----------TKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEK 417
Query: 528 QLHTSEGTSPAQQQV-ALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVR--FVXX 698
L T++ T A++++ A +D Q I+ +++ ++ +L CV+ V
Sbjct: 418 ALSTAQKTEEARRKMKAEMDEQ---------IKAIEKASEEERVRLQQELSCVKQEVVDV 468
Query: 699 XXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLH-----TLEAEKCNAIRIQEQHI 863
H +EL Q+L +LQ + + LE + ++I ++
Sbjct: 469 TKKSSEQIAKLQKLHEKELASKEQELTKKLQTQETEFQEQMRIALEKSQSEYLKITQEKD 528
Query: 864 QHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXX 1043
Q + +L ++ +K D + E R RI + + +LE+++
Sbjct: 529 QQESLALEE-----LELQKKAILTESENKLRDLKQE-AETYRTRILELESSLEKSLQENK 582
Query: 1044 XXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQ 1223
HL + H + E TI + + L+ +Q + +
Sbjct: 583 NQSEDLTS-----HLEAEKNKH----------NKEITIMVEKHKTELESLQHQQDNIWTE 627
Query: 1224 NLQWLRE----EMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSE- 1388
LQ L++ EME +++E+E++++ +T +E+++ L KL Q+E
Sbjct: 628 KLQVLKQQHQTEMEELREKYEQEKETLVKDRETLF---QAHIEEMNEKTLEKLDVKQTEL 684
Query: 1389 --IAEELCQRLQRKERMLQDL-----LSDRNKQAVEYEMEIQ--GLLQSMSTREQESQAA 1541
++ EL + L+ ++++ ++L +DR KQ +E +++ Q Q + +E + +
Sbjct: 685 ESLSSELSEVLKTRDKLEEELSVLKDQADRVKQELEAKLDEQKNHHQQQVDNIIKEQEIS 744
Query: 1542 AEKMVQALMERNSELQAL 1595
++ +AL + ++L L
Sbjct: 745 IQRTEKALKDEINQLGLL 762
>ref|XP_002696957.1| PREDICTED: golgi autoantigen, golgin subfamily a, 4 [Bos taurus].
Length = 2266
Score = 67.4 bits (163), Expect = 4e-11
Identities = 103/548 (18%), Positives = 213/548 (38%), Gaps = 71/548 (12%)
Frame = +3
Query: 171 DMEVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEM 350
+M+ + + +KQ +E ++ + EL++ + + T + ++ EM
Sbjct: 414 EMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEM 473
Query: 351 SCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLG- 527
++ +Q +K +E+ V + +E +AKL++ LH+ +L
Sbjct: 474 DEQIKAIEKASEEERVRLQQELSCVK------QEVVDVTKKSSEQIAKLQK-LHEKELAS 526
Query: 528 -------QLHTSEGTSPAQQQVAL-------------LDLQSALFCSQLEIQKLQRVVRQ 647
+L T E Q ++AL D Q +L +LE+QK + ++ +
Sbjct: 527 KEQELTKKLQTQETEFQEQMRIALEKSQSEYLKITQEKDQQESLALEELELQK-KAILTE 585
Query: 648 KERQLTDAKRCVRFVXXXXXXXXXXXXXSW-------------------KHNQELRKALQ 770
E +L D K+ S KHN+E+ ++
Sbjct: 586 SENKLRDLKQEAETYRTRILELESSLEKSLQENKNQSEDLTSHLEAEKNKHNKEITIMVE 645
Query: 771 QLQGELQNKSQQLHTLEAEKCNAIRIQEQ-HIQHLNHSLSH------KXXXXXXXXXXXX 929
+ + EL++ Q + EK ++ Q Q ++ L K
Sbjct: 646 KHKTELESLQHQQDNIWTEKLQVLKQQHQTEMEELREKYEQEKETLVKDRETLFQAHIEE 705
Query: 930 YRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRE-RD 1106
+ + + LD + LE L + + ++ + ++L + E ++
Sbjct: 706 MNEKTLEKLDVKQTELESLSSELSEVLKTRDKLEEELSVLKDQADRVKQELEAKLDEQKN 765
Query: 1107 HDLERLRGVLSSNEATIQSMESLLRAK----GLEVEQLSATCQNLQWLREEMET--KFSH 1268
H +++ ++ E +IQ E L+ + GL +++ + Q E +E K S
Sbjct: 766 HHQQQVDNIIKEQEISIQRTEKALKDEINQLGLLLKEKDRHLKEHQARVESLEADIKRSE 825
Query: 1269 WQKEQES----IIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSE-------IAE------ 1397
+ +Q S + Q LQ + H++ K E+ A L +L ++E +AE
Sbjct: 826 GELQQASTKLELFQSLQNTTHEQAKVHEEQLAQLQQQLLDLETERILLTKQVAEVEAQKK 885
Query: 1398 ELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERN 1577
++C L + +QDLL KQ E E +++ L Q ++ +++ E+ Q LME+
Sbjct: 886 DVCAELDAHKIQVQDLLQKLEKQNREMEEKVKSLTQLSESQLKDNNTEQEQRKQLLMEKE 945
Query: 1578 SELQALRQ 1601
+ + +R+
Sbjct: 946 NVILQMRE 953
Score = 50.1 bits (118), Expect = 7e-06
Identities = 94/498 (18%), Positives = 203/498 (40%), Gaps = 29/498 (5%)
Frame = +3
Query: 189 VTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXX 368
+T +E L++Q DE + + + H+AE + I Q ++++ + +
Sbjct: 348 LTSEKEALQEQL---DERLQELEKMKELHMAEKTKLITQLRDAKNLIEQLEQDKGMVIAE 404
Query: 369 XXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLG------- 527
T + ETL+ +E E +L I+ +LRE +S+
Sbjct: 405 ----------TKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEK 454
Query: 528 QLHTSEGTSPAQQQV-ALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVR--FVXX 698
L T++ T A++++ A +D Q I+ +++ ++ +L CV+ V
Sbjct: 455 ALSTAQKTEEARRKMKAEMDEQ---------IKAIEKASEEERVRLQQELSCVKQEVVDV 505
Query: 699 XXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLH-----TLEAEKCNAIRIQEQHI 863
H +EL Q+L +LQ + + LE + ++I ++
Sbjct: 506 TKKSSEQIAKLQKLHEKELASKEQELTKKLQTQETEFQEQMRIALEKSQSEYLKITQEKD 565
Query: 864 QHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXX 1043
Q + +L ++ +K D + E R RI + + +LE+++
Sbjct: 566 QQESLALEE-----LELQKKAILTESENKLRDLKQE-AETYRTRILELESSLEKSLQENK 619
Query: 1044 XXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQ 1223
HL + H + E TI + + L+ +Q + +
Sbjct: 620 NQSEDLTS-----HLEAEKNKH----------NKEITIMVEKHKTELESLQHQQDNIWTE 664
Query: 1224 NLQWLRE----EMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSE- 1388
LQ L++ EME +++E+E++++ +T +E+++ L KL Q+E
Sbjct: 665 KLQVLKQQHQTEMEELREKYEQEKETLVKDRETLF---QAHIEEMNEKTLEKLDVKQTEL 721
Query: 1389 --IAEELCQRLQRKERMLQDL-----LSDRNKQAVEYEMEIQ--GLLQSMSTREQESQAA 1541
++ EL + L+ ++++ ++L +DR KQ +E +++ Q Q + +E + +
Sbjct: 722 ESLSSELSEVLKTRDKLEEELSVLKDQADRVKQELEAKLDEQKNHHQQQVDNIIKEQEIS 781
Query: 1542 AEKMVQALMERNSELQAL 1595
++ +AL + ++L L
Sbjct: 782 IQRTEKALKDEINQLGLL 799
>ref|XP_002692496.1| PREDICTED: centrosomal protein 250kDa [Bos taurus].
Length = 2434
Score = 65.9 bits (159), Expect = 1e-10
Identities = 107/480 (22%), Positives = 190/480 (39%), Gaps = 20/480 (4%)
Frame = +3
Query: 222 KLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXT 401
KL ++E A +Q LQE+ + A K LQE L ++
Sbjct: 1389 KLKNEEVASERQRAQ-----ALQEQGELKVAQGKALQENLARLA---------------- 1427
Query: 402 IQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALL 581
+ L RE E E L +G+ E + K REM ++ L L + +
Sbjct: 1428 -----QALSEREGEVETL----QGKIEELEKQREM-QKAVLEVLSLDLKKRNREVDLQQG 1477
Query: 582 DLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRK 761
+Q C + ++ L V+++E+QL + +R + H EL K
Sbjct: 1478 QIQELEECRSV-LEHLPVAVQEREQQLALQRERIRELEKDRETQTSILEH---HLLELEK 1533
Query: 762 ALQQLQ---GELQNKSQQLHTLEA------EKCNAIRIQEQHIQHLNH-------SLSHK 893
+Q ++ G++Q+ +QL T E EK + Q++ I+ L +L+H
Sbjct: 1534 KVQVIESQKGQIQDLKKQLVTTECLALELEEKRHKTESQQKAIEELEGQREAQRVALTHL 1593
Query: 894 XXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALE---RAIDXXXXXXXXXX 1064
+ N + L+ + LL Q + +A + R +
Sbjct: 1594 TLDLEERSQELLAQGNRIQELEGHSTLLASELQEKEQEAMAQQDQIRDLQRQKERLSQDL 1653
Query: 1065 XXXRQLHLAVRERDHDLERLRGVLSSN-EATIQSMESLLRAKGLEVEQLSATCQNLQWLR 1241
Q + ++ER LE R + E ++ ++ LR +G E+ + + LR
Sbjct: 1654 ERREQELVLLKERTQSLEDQRSRQTKILEEDLEQIKLALRERGRELV-------SQRQLR 1706
Query: 1242 EEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQR 1421
+E + K Q ++ ++ L D+ KEVE + +L + ++ +EL Q L R
Sbjct: 1707 QEWAEEGKGQSKAQRGSLEHMKLILRDKEKEVE-CQQEHIQELREHRDQLEQEL-QGLHR 1764
Query: 1422 KERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQ 1601
K LL+ R ++ + +Q +EQE Q E+ + L++R ELQAL+Q
Sbjct: 1765 KVSETSLLLTQREQEIAVLQQHLQEAQDQGELKEQELQGQLEETQRVLVQRTQELQALQQ 1824
>ref|XP_002684342.1| PREDICTED: centrosomal protein 250kDa [Bos taurus].
Length = 2434
Score = 65.9 bits (159), Expect = 1e-10
Identities = 107/480 (22%), Positives = 190/480 (39%), Gaps = 20/480 (4%)
Frame = +3
Query: 222 KLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXT 401
KL ++E A +Q LQE+ + A K LQE L ++
Sbjct: 1389 KLKNEEVASERQRAQ-----ALQEQGELKVAQGKALQENLARLA---------------- 1427
Query: 402 IQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALL 581
+ L RE E E L +G+ E + K REM ++ L L + +
Sbjct: 1428 -----QALSEREGEVETL----QGKIEELEKQREM-QKAVLEVLSLDLKKRNREVDLQQG 1477
Query: 582 DLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRK 761
+Q C + ++ L V+++E+QL + +R + H EL K
Sbjct: 1478 QIQELEECRSV-LEHLPVAVQEREQQLALQRERIRELEKDRETQTSILEH---HLLELEK 1533
Query: 762 ALQQLQ---GELQNKSQQLHTLEA------EKCNAIRIQEQHIQHLNH-------SLSHK 893
+Q ++ G++Q+ +QL T E EK + Q++ I+ L +L+H
Sbjct: 1534 KVQVIESQKGQIQDLKKQLVTTECLALELEEKRHKTESQQKAIEELEGQREAQRVALTHL 1593
Query: 894 XXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALE---RAIDXXXXXXXXXX 1064
+ N + L+ + LL Q + +A + R +
Sbjct: 1594 TLDLEERSQELLAQGNRIQELEGHSTLLASELQEKEQEAMAQQDQIRDLQRQKERLSQDL 1653
Query: 1065 XXXRQLHLAVRERDHDLERLRGVLSSN-EATIQSMESLLRAKGLEVEQLSATCQNLQWLR 1241
Q + ++ER LE R + E ++ ++ LR +G E+ + + LR
Sbjct: 1654 ERREQELVLLKERTQSLEDQRSRQTKILEEDLEQIKLALRERGRELV-------SQRQLR 1706
Query: 1242 EEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQR 1421
+E + K Q ++ ++ L D+ KEVE + +L + ++ +EL Q L R
Sbjct: 1707 QEWAEEGKGQSKAQRGSLEHMKLILRDKEKEVE-CQQEHIQELREHRDQLEQEL-QGLHR 1764
Query: 1422 KERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQ 1601
K LL+ R ++ + +Q +EQE Q E+ + L++R ELQAL+Q
Sbjct: 1765 KVSETSLLLTQREQEIAVLQQHLQEAQDQGELKEQELQGQLEETQRVLVQRTQELQALQQ 1824
>ref|NP_001107627.1| RB1-inducible coiled-coil protein 1 [Bos taurus].
Length = 1589
Score = 61.6 bits (148), Expect = 2e-09
Identities = 98/456 (21%), Positives = 185/456 (40%), Gaps = 4/456 (0%)
Frame = +3
Query: 195 MTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXX 374
M E L +KL + +Q + DSH A +QEK QQ + K+ L++M C+L
Sbjct: 1006 MNEHRLCLEKLEMENQQRIEQ-IQDSHAAVIQEKEQQLQEL-KLKVSDLSDMRCKLEVEL 1063
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTS 554
I+ E +SR E + L + E + E + ++++ +L+ +
Sbjct: 1064 ALKEAETDEIKMLLE--ESRTQEKKTLQSLFEKETEQL--------RAEISKLNQKIHDN 1113
Query: 555 PAQQQVALLDLQSALFC--SQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXX 728
QV L +L++ + Q + + R + +R TD +
Sbjct: 1114 NENYQVGLTELRTLMTVEKDQCISELISRHEEESDRLTTDLNKMTSL------------- 1160
Query: 729 XSWKHNQELRKALQQLQGELQNK-SQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXXX 905
++ E+ K L++ ELQ+K +L LE +K I QE + + L
Sbjct: 1161 --YQQAFEIEKGLKEELAELQSKLDSELSALEKQKDEKISQQEDMYKAIIQKL------- 1211
Query: 906 XXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQ-DRDVALERAIDXXXXXXXXXXXXXRQL 1082
+ ++ + E E+L QR+ +++ A+E A +++
Sbjct: 1212 ---------EKDKEEFVMRQEQDREQLVQRLNCEKEAAIETA--------------RKEM 1248
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
HL + +L L S A +MES E S+ LQ +E + KF
Sbjct: 1249 HLEREAVEKELLEKVKHLESQLAKSHAMESAR-------EDSSSLVAELQEKLQEEKAKF 1301
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
++QL+ +N+E++++ +L+ + Q+ L + RKE ++ D
Sbjct: 1302 ----------LEQLEEQEKRKNEEMQNVRTSLIAE---QQTNFNTVLTREKMRKENIIND 1348
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEK 1550
LSD+ K ++ + + L++S+S E ++ EK
Sbjct: 1349 -LSDKLKSTMQQQERDKDLIESLS--EDRARLLEEK 1381
>ref|NP_777259.1| myosin-10 [Bos taurus].
Length = 1976
Score = 61.2 bits (147), Expect = 3e-09
Identities = 95/465 (20%), Positives = 184/465 (39%), Gaps = 35/465 (7%)
Frame = +3
Query: 276 LAELQEKIQQTEATNKILQEKLNEMSC---ELXXXXXXXXXXXXTIQSFKETLKSRESET 446
L +L+ ++++ E N+ILQ + +M +L +Q K T +++ +
Sbjct: 924 LHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLDEEEGARQKLQLEKVTAEAKIKKM 983
Query: 447 EELYQVIEGQNETMAKLREMLHQ------SQLGQLHTSEGTSPA---QQQVALLDLQSAL 599
EE ++E QN K ++++ SQL + +Q+V + DL+ L
Sbjct: 984 EEEILLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERL 1043
Query: 600 FCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQ 779
+ Q+L++ R+ + + TD + + + K +EL+ AL +
Sbjct: 1044 KKEEKTRQELEKAKRKLDGETTDLQDQIAELQAQIDELKIQVA---KKEEELQGALARGD 1100
Query: 780 GELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLD 959
E +K+ L + + +QE + + + TLD
Sbjct: 1101 DETLHKNNALKVVRELQAQIAELQEDFESEKASRNKAEKQKRDLSEELEALKTELEDTLD 1160
Query: 960 ANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHL-AVRERDHDLERLRGVL 1136
E LR + + L++A++ RQ H A+ E LE+ +
Sbjct: 1161 TTAAQQE-LRTKREQEVAELKKALEEETKSHEAQIQDMRQRHATALEELSEQLEQAKRFK 1219
Query: 1137 SSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSL 1316
++ E Q +E+ + ++L+ + LQ ++ E E H +K+ ++ +Q+L
Sbjct: 1220 ANLEKNKQGLET-------DNKELACEVKVLQQVKAESE----HKRKKLDAQVQEL---- 1264
Query: 1317 HDRNKEVEDLSATLLCKLGPGQSEI--AEELCQRLQRK-----------ERMLQD---LL 1448
H + E + L L K Q+E+ L + ++K E LQD LL
Sbjct: 1265 HAKVSEGDRLRVELAEKANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQELL 1324
Query: 1449 SDRNKQAVEYEMEIQGL------LQSMSTREQESQAAAEKMVQAL 1565
+ +Q + I+ L LQ E+E++ + EK +QAL
Sbjct: 1325 QEETRQKLNLSSRIRQLEEERSSLQEQQEEEEEARRSLEKQLQAL 1369
>ref|XP_002688141.1| PREDICTED: centromere protein E, 312kDa [Bos taurus].
Length = 2695
Score = 58.9 bits (141), Expect = 1e-08
Identities = 112/521 (21%), Positives = 211/521 (40%), Gaps = 36/521 (6%)
Frame = +3
Query: 174 MEVQPVTMTEELLKQQ---KLNSDETAITQ--QSVSDSHLAELQEKIQQTEATNKILQEK 338
+E++ + ++E L + K + E A Q Q S ++LQE +++ A +EK
Sbjct: 1415 LEMEKLELSERLQESHDEVKAVAKERADLQRLQEFLQSEKSQLQENLREMTAKQLETEEK 1474
Query: 339 LNEMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQS 518
L C L I + L RE+E + Q +E N+ + K + L++
Sbjct: 1475 LKVAHCHL-------KEQEEIIDKLRVDLSKRETEISHIQQELETANDKLQKKTQELYEK 1527
Query: 519 QLGQLHTSEGTSPAQQQVALLD-LQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVX 695
Q T + S Q++++ L+ L+ L +Q+ + + +L ++ ++ +
Sbjct: 1528 ---QFITIKEISETQEKMSELEQLKEHLKAKDSSLQRKESERLKLTEKLQGSQEELKTII 1584
Query: 696 XXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLN 875
K E L+++Q LQ ++ QL E I Q +Q
Sbjct: 1585 --------------KEGDE----LERVQEALQKETDQL----KENTKEIVADIQELQEEE 1622
Query: 876 HSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLE-------KLRQRIQD-----RDVAL 1019
H L + +N K L+A + LE KL QR+ + R V
Sbjct: 1623 HQLL-EMKDVSETWEKICEMENLKKQLEAQKSTLENTEWENIKLTQRLNENIAEIRSVTK 1681
Query: 1020 ERAIDXXXXXXXXXXXXXRQLHLAVRE-RDHDLERLRGV------LSSNEATIQSMESLL 1178
ER D QL +RE DLER + L ++ TI + ++
Sbjct: 1682 ER--DDLRNMEETLKVEIDQLKENLRETMSRDLERQEELRIAQMNLKEHKETIDKLRGIV 1739
Query: 1179 RAKGLEVEQLSATCQN------LQWLREEMETKFSHWQ-KEQESIIQQLQTSLHDRNKEV 1337
K E+ + +N Q L ++ E + +H KE + II +L+ + ++ +E+
Sbjct: 1740 SGKTDEISNIQMNLENTNTALKAQDLEKQEELRIAHLHLKEHQEIIDKLRGIVSEKAEEI 1799
Query: 1338 EDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNK----QAVEYEMEIQGLLQ 1505
++ L Q ++ +EL QR ++ +++ + K + ++ E + Q L
Sbjct: 1800 SNMQMDLENSDAKLQEKV-QELKANEQRLFKLKEEISETKKKMCDIEQLKNEFKCQSL-- 1856
Query: 1506 SMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDFTM 1628
+M+ E E+ A+K+ + L E S ++ R L G + T+
Sbjct: 1857 TMNKIEMENLNLAQKLHENLEEMKSVMKE-RDNLRGLEETL 1896
>ref|XP_002704562.1| PREDICTED: centromere protein E [Bos taurus].
Length = 2695
Score = 58.9 bits (141), Expect = 1e-08
Identities = 112/521 (21%), Positives = 211/521 (40%), Gaps = 36/521 (6%)
Frame = +3
Query: 174 MEVQPVTMTEELLKQQ---KLNSDETAITQ--QSVSDSHLAELQEKIQQTEATNKILQEK 338
+E++ + ++E L + K + E A Q Q S ++LQE +++ A +EK
Sbjct: 1415 LEMEKLELSERLQESHDEVKAVAKERADLQRLQEFLQSEKSQLQENLREMTAKQLETEEK 1474
Query: 339 LNEMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQS 518
L C L I + L RE+E + Q +E N+ + K + L++
Sbjct: 1475 LKVAHCHL-------KEQEEIIDKLRVDLSKRETEISHIQQELETANDKLQKKTQELYEK 1527
Query: 519 QLGQLHTSEGTSPAQQQVALLD-LQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVX 695
Q T + S Q++++ L+ L+ L +Q+ + + +L ++ ++ +
Sbjct: 1528 ---QFITIKEISETQEKMSELEQLKEHLKAKDSSLQRKESERLKLTEKLQGSQEELKTII 1584
Query: 696 XXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLN 875
K E L+++Q LQ ++ QL E I Q +Q
Sbjct: 1585 --------------KEGDE----LERVQEALQKETDQL----KENTKEIVADIQELQEEE 1622
Query: 876 HSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLE-------KLRQRIQD-----RDVAL 1019
H L + +N K L+A + LE KL QR+ + R V
Sbjct: 1623 HQLL-EMKDVSETWEKICEMENLKKQLEAQKSTLENTEWENIKLTQRLNENIAEIRSVTK 1681
Query: 1020 ERAIDXXXXXXXXXXXXXRQLHLAVRE-RDHDLERLRGV------LSSNEATIQSMESLL 1178
ER D QL +RE DLER + L ++ TI + ++
Sbjct: 1682 ER--DDLRNMEETLKVEIDQLKENLRETMSRDLERQEELRIAQMNLKEHKETIDKLRGIV 1739
Query: 1179 RAKGLEVEQLSATCQN------LQWLREEMETKFSHWQ-KEQESIIQQLQTSLHDRNKEV 1337
K E+ + +N Q L ++ E + +H KE + II +L+ + ++ +E+
Sbjct: 1740 SGKTDEISNIQMNLENTNTALKAQDLEKQEELRIAHLHLKEHQEIIDKLRGIVSEKAEEI 1799
Query: 1338 EDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNK----QAVEYEMEIQGLLQ 1505
++ L Q ++ +EL QR ++ +++ + K + ++ E + Q L
Sbjct: 1800 SNMQMDLENSDAKLQEKV-QELKANEQRLFKLKEEISETKKKMCDIEQLKNEFKCQSL-- 1856
Query: 1506 SMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDFTM 1628
+M+ E E+ A+K+ + L E S ++ R L G + T+
Sbjct: 1857 TMNKIEMENLNLAQKLHENLEEMKSVMKE-RDNLRGLEETL 1896
>ref|XP_002690549.1| PREDICTED: myosin, heavy polypeptide 6, cardiac muscle, alpha-like
[Bos taurus].
Length = 1927
Score = 58.5 bits (140), Expect = 2e-08
Identities = 109/515 (21%), Positives = 195/515 (37%), Gaps = 19/515 (3%)
Frame = +3
Query: 210 LKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXX 389
L++ L + TA + +AEL E+I + + L+++ +E EL
Sbjct: 1168 LEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDD------- 1220
Query: 390 XXXTIQSFKETLKSRESETEELYQVIEGQ-NETMAKLREMLHQSQLGQLHTSEGTSPAQQ 566
+ S E + ++ E++ + +E Q NE AKL E
Sbjct: 1221 ----VTSNMEQIIKAKANLEKMSRTLEDQANEYRAKLEEA-------------------- 1256
Query: 567 QVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHN 746
Q +L D + Q E +L R + +KE ++ R +
Sbjct: 1257 QRSLNDFSTQRAKLQTENGELSRQLEEKEALISQLTR-----------------GKLSYT 1299
Query: 747 QELRKALQQLQGELQNKSQQLHTLEAEK--CNAIRIQEQHIQHLNHSLSH--KXXXXXXX 914
Q+L +QL+ E + K+ H L++ + C+ +R Q + L
Sbjct: 1300 QQLEDLKRQLEEEGKAKNALAHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVA 1359
Query: 915 XXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAV 1094
Y ++ + + E +KL QR+QD + A+E AV
Sbjct: 1360 QWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEAVE----------------------AV 1397
Query: 1095 RERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQ 1274
+ LE+ + L + +E L+ ++VE+ +A L + + + W+
Sbjct: 1398 NAKCSSLEKTKHRLQN------EIEDLM----VDVERSNAAAAALDKKQRNFDKILAEWK 1447
Query: 1275 KEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSD 1454
++ E + Q+ L KE LS T L KL E E L + +R+ + LQ+ +SD
Sbjct: 1448 QKYE----ESQSELESSQKEARSLS-TELFKLKNAYEESLEHL-ETFKRENKNLQEEISD 1501
Query: 1455 RNKQ------------AVEYEMEIQGLLQSMSTREQESQAAAE--KMVQALMERNSELQA 1592
+Q V ++E++ L + E E+ E K+++A +E N
Sbjct: 1502 LTEQLGEGGKNMHELEKVRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAE 1561
Query: 1593 LRQYLGGKDFTMSQALISNRPAEVTSISPHLGEQT 1697
+ + L KD M QA N V S+ L +T
Sbjct: 1562 IERKLVEKDEEMEQAK-RNHLRVVDSLQTSLDAET 1595
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 63,249,246
Number of extensions: 1583715
Number of successful extensions: 6273
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 6092
Number of HSP's successfully gapped: 29
Length of query: 626
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 518
Effective length of database: 14,107,870
Effective search space: 7307876660
Effective search space used: 7307876660
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009405
(1878 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_849336.1| PREDICTED: similar to phosphodiesterase 4D inte... 885 0.0
Alignment gi|XP_858465.1| PREDICTED: similar to phosphodiesterase 4D inte... 885 0.0
Alignment gi|XP_858387.1| PREDICTED: similar to phosphodiesterase 4D inte... 885 0.0
Alignment gi|XP_858353.1| PREDICTED: similar to phosphodiesterase 4D inte... 885 0.0
Alignment gi|XP_858310.1| PREDICTED: similar to phosphodiesterase 4D inte... 885 0.0
Alignment gi|XP_533026.2| PREDICTED: similar to phosphodiesterase 4D inte... 885 0.0
Alignment gi|XP_858426.1| PREDICTED: similar to phosphodiesterase 4D inte... 840 0.0
Alignment gi|NP_001107189.1| myosin-1 [Canis lupus familiaris]. 62 1e-09
Alignment gi|XP_532649.2| PREDICTED: similar to Early endosome antigen 1 ... 61 4e-09
Alignment gi|NP_001070263.1| myosin-2 [Canis lupus familiaris]. 60 6e-09
>ref|XP_849336.1| PREDICTED: similar to phosphodiesterase 4D interacting protein
isoform 1 isoform 2 [Canis familiaris].
Length = 2351
Score = 885 bits (2288), Expect = 0.0
Identities = 475/625 (76%), Positives = 503/625 (80%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
E+VP D V P+QYTEALAQRDKRIEEL QSLA+ P ME+
Sbjct: 152 EEVPMDQVNPDQYTEALAQRDKRIEELHQSLASQEKLVEQLSQEKQQLLHLLEEPMSMEI 211
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPVT EELLKQQKL+SDET ITQQSVSDSHLAELQEKIQQ EATNKILQEKLNEMSCEL
Sbjct: 212 QPVT--EELLKQQKLDSDETIITQQSVSDSHLAELQEKIQQMEATNKILQEKLNEMSCEL 269
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KETLKSRE+ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 270 KSAQESSQKQDGTIQSLKETLKSRENETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 329
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
+GTSPAQQQ+ALLDLQS LF SQLEIQKLQR+VRQKERQL DAKRCV+FV
Sbjct: 330 QGTSPAQQQMALLDLQSGLFYSQLEIQKLQRLVRQKERQLADAKRCVQFVEAAAHEREQQ 389
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQGEL++KSQQL TLE EKCN IR EQHIQHLNHSLSHK
Sbjct: 390 KEASWKHNQELRKALQQLQGELESKSQQLRTLETEKCNEIRAHEQHIQHLNHSLSHKEQL 449
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRD SDKTL+ANEMLLEKLRQRIQDRDVALERAID RQ
Sbjct: 450 LQEFRELLQYRDKSDKTLEANEMLLEKLRQRIQDRDVALERAIDEKFSALEEKEKELRQF 509
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
HLAVRERDHDLERLR +LSSNEAT+QSMESLLRAKGLEVEQLSATCQNLQWL+EE ETKF
Sbjct: 510 HLAVRERDHDLERLRAILSSNEATMQSMESLLRAKGLEVEQLSATCQNLQWLKEEKETKF 569
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
SHWQKEQESIIQQLQTSLHDRNKEVEDLSATL CKLGPGQSE+AEELCQRLQRKERMLQ+
Sbjct: 570 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLFCKLGPGQSEVAEELCQRLQRKERMLQE 629
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LL+DRNKQAVE+E+EIQGLLQSMSTREQESQAAA KMVQALMERNSELQALRQYLGGKDF
Sbjct: 630 LLTDRNKQAVEHEIEIQGLLQSMSTREQESQAAAGKMVQALMERNSELQALRQYLGGKDF 689
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
+SQALISN+P EVTS SP LGEQTDQG +HIPS+DDS SLTAKGD SIPRSS GD DTV
Sbjct: 690 MVSQALISNQPTEVTSNSPRLGEQTDQGSVHIPSKDDSISLTAKGDTSIPRSSLGDQDTV 749
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +SR
Sbjct: 750 AGLEKELSNAKEELELMAKKERESR 774
>ref|XP_858465.1| PREDICTED: similar to phosphodiesterase 4D interacting protein
isoform 1 isoform 7 [Canis familiaris].
Length = 2359
Score = 885 bits (2288), Expect = 0.0
Identities = 475/625 (76%), Positives = 503/625 (80%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
E+VP D V P+QYTEALAQRDKRIEEL QSLA+ P ME+
Sbjct: 152 EEVPMDQVNPDQYTEALAQRDKRIEELHQSLASQEKLVEQLSQEKQQLLHLLEEPMSMEI 211
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPVT EELLKQQKL+SDET ITQQSVSDSHLAELQEKIQQ EATNKILQEKLNEMSCEL
Sbjct: 212 QPVT--EELLKQQKLDSDETIITQQSVSDSHLAELQEKIQQMEATNKILQEKLNEMSCEL 269
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KETLKSRE+ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 270 KSAQESSQKQDGTIQSLKETLKSRENETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 329
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
+GTSPAQQQ+ALLDLQS LF SQLEIQKLQR+VRQKERQL DAKRCV+FV
Sbjct: 330 QGTSPAQQQMALLDLQSGLFYSQLEIQKLQRLVRQKERQLADAKRCVQFVEAAAHEREQQ 389
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQGEL++KSQQL TLE EKCN IR EQHIQHLNHSLSHK
Sbjct: 390 KEASWKHNQELRKALQQLQGELESKSQQLRTLETEKCNEIRAHEQHIQHLNHSLSHKEQL 449
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRD SDKTL+ANEMLLEKLRQRIQDRDVALERAID RQ
Sbjct: 450 LQEFRELLQYRDKSDKTLEANEMLLEKLRQRIQDRDVALERAIDEKFSALEEKEKELRQF 509
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
HLAVRERDHDLERLR +LSSNEAT+QSMESLLRAKGLEVEQLSATCQNLQWL+EE ETKF
Sbjct: 510 HLAVRERDHDLERLRAILSSNEATMQSMESLLRAKGLEVEQLSATCQNLQWLKEEKETKF 569
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
SHWQKEQESIIQQLQTSLHDRNKEVEDLSATL CKLGPGQSE+AEELCQRLQRKERMLQ+
Sbjct: 570 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLFCKLGPGQSEVAEELCQRLQRKERMLQE 629
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LL+DRNKQAVE+E+EIQGLLQSMSTREQESQAAA KMVQALMERNSELQALRQYLGGKDF
Sbjct: 630 LLTDRNKQAVEHEIEIQGLLQSMSTREQESQAAAGKMVQALMERNSELQALRQYLGGKDF 689
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
+SQALISN+P EVTS SP LGEQTDQG +HIPS+DDS SLTAKGD SIPRSS GD DTV
Sbjct: 690 MVSQALISNQPTEVTSNSPRLGEQTDQGSVHIPSKDDSISLTAKGDTSIPRSSLGDQDTV 749
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +SR
Sbjct: 750 AGLEKELSNAKEELELMAKKERESR 774
>ref|XP_858387.1| PREDICTED: similar to phosphodiesterase 4D interacting protein
isoform 1 isoform 5 [Canis familiaris].
Length = 2409
Score = 885 bits (2288), Expect = 0.0
Identities = 475/625 (76%), Positives = 503/625 (80%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
E+VP D V P+QYTEALAQRDKRIEEL QSLA+ P ME+
Sbjct: 202 EEVPMDQVNPDQYTEALAQRDKRIEELHQSLASQEKLVEQLSQEKQQLLHLLEEPMSMEI 261
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPVT EELLKQQKL+SDET ITQQSVSDSHLAELQEKIQQ EATNKILQEKLNEMSCEL
Sbjct: 262 QPVT--EELLKQQKLDSDETIITQQSVSDSHLAELQEKIQQMEATNKILQEKLNEMSCEL 319
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KETLKSRE+ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 320 KSAQESSQKQDGTIQSLKETLKSRENETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 379
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
+GTSPAQQQ+ALLDLQS LF SQLEIQKLQR+VRQKERQL DAKRCV+FV
Sbjct: 380 QGTSPAQQQMALLDLQSGLFYSQLEIQKLQRLVRQKERQLADAKRCVQFVEAAAHEREQQ 439
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQGEL++KSQQL TLE EKCN IR EQHIQHLNHSLSHK
Sbjct: 440 KEASWKHNQELRKALQQLQGELESKSQQLRTLETEKCNEIRAHEQHIQHLNHSLSHKEQL 499
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRD SDKTL+ANEMLLEKLRQRIQDRDVALERAID RQ
Sbjct: 500 LQEFRELLQYRDKSDKTLEANEMLLEKLRQRIQDRDVALERAIDEKFSALEEKEKELRQF 559
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
HLAVRERDHDLERLR +LSSNEAT+QSMESLLRAKGLEVEQLSATCQNLQWL+EE ETKF
Sbjct: 560 HLAVRERDHDLERLRAILSSNEATMQSMESLLRAKGLEVEQLSATCQNLQWLKEEKETKF 619
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
SHWQKEQESIIQQLQTSLHDRNKEVEDLSATL CKLGPGQSE+AEELCQRLQRKERMLQ+
Sbjct: 620 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLFCKLGPGQSEVAEELCQRLQRKERMLQE 679
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LL+DRNKQAVE+E+EIQGLLQSMSTREQESQAAA KMVQALMERNSELQALRQYLGGKDF
Sbjct: 680 LLTDRNKQAVEHEIEIQGLLQSMSTREQESQAAAGKMVQALMERNSELQALRQYLGGKDF 739
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
+SQALISN+P EVTS SP LGEQTDQG +HIPS+DDS SLTAKGD SIPRSS GD DTV
Sbjct: 740 MVSQALISNQPTEVTSNSPRLGEQTDQGSVHIPSKDDSISLTAKGDTSIPRSSLGDQDTV 799
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +SR
Sbjct: 800 AGLEKELSNAKEELELMAKKERESR 824
>ref|XP_858353.1| PREDICTED: similar to phosphodiesterase 4D interacting protein
isoform 1 isoform 4 [Canis familiaris].
Length = 2362
Score = 885 bits (2288), Expect = 0.0
Identities = 475/625 (76%), Positives = 503/625 (80%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
E+VP D V P+QYTEALAQRDKRIEEL QSLA+ P ME+
Sbjct: 155 EEVPMDQVNPDQYTEALAQRDKRIEELHQSLASQEKLVEQLSQEKQQLLHLLEEPMSMEI 214
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPVT EELLKQQKL+SDET ITQQSVSDSHLAELQEKIQQ EATNKILQEKLNEMSCEL
Sbjct: 215 QPVT--EELLKQQKLDSDETIITQQSVSDSHLAELQEKIQQMEATNKILQEKLNEMSCEL 272
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KETLKSRE+ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 273 KSAQESSQKQDGTIQSLKETLKSRENETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 332
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
+GTSPAQQQ+ALLDLQS LF SQLEIQKLQR+VRQKERQL DAKRCV+FV
Sbjct: 333 QGTSPAQQQMALLDLQSGLFYSQLEIQKLQRLVRQKERQLADAKRCVQFVEAAAHEREQQ 392
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQGEL++KSQQL TLE EKCN IR EQHIQHLNHSLSHK
Sbjct: 393 KEASWKHNQELRKALQQLQGELESKSQQLRTLETEKCNEIRAHEQHIQHLNHSLSHKEQL 452
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRD SDKTL+ANEMLLEKLRQRIQDRDVALERAID RQ
Sbjct: 453 LQEFRELLQYRDKSDKTLEANEMLLEKLRQRIQDRDVALERAIDEKFSALEEKEKELRQF 512
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
HLAVRERDHDLERLR +LSSNEAT+QSMESLLRAKGLEVEQLSATCQNLQWL+EE ETKF
Sbjct: 513 HLAVRERDHDLERLRAILSSNEATMQSMESLLRAKGLEVEQLSATCQNLQWLKEEKETKF 572
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
SHWQKEQESIIQQLQTSLHDRNKEVEDLSATL CKLGPGQSE+AEELCQRLQRKERMLQ+
Sbjct: 573 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLFCKLGPGQSEVAEELCQRLQRKERMLQE 632
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LL+DRNKQAVE+E+EIQGLLQSMSTREQESQAAA KMVQALMERNSELQALRQYLGGKDF
Sbjct: 633 LLTDRNKQAVEHEIEIQGLLQSMSTREQESQAAAGKMVQALMERNSELQALRQYLGGKDF 692
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
+SQALISN+P EVTS SP LGEQTDQG +HIPS+DDS SLTAKGD SIPRSS GD DTV
Sbjct: 693 MVSQALISNQPTEVTSNSPRLGEQTDQGSVHIPSKDDSISLTAKGDTSIPRSSLGDQDTV 752
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +SR
Sbjct: 753 AGLEKELSNAKEELELMAKKERESR 777
>ref|XP_858310.1| PREDICTED: similar to phosphodiesterase 4D interacting protein
isoform 2 isoform 3 [Canis familiaris].
Length = 954
Score = 885 bits (2288), Expect = 0.0
Identities = 475/625 (76%), Positives = 503/625 (80%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
E+VP D V P+QYTEALAQRDKRIEEL QSLA+ P ME+
Sbjct: 152 EEVPMDQVNPDQYTEALAQRDKRIEELHQSLASQEKLVEQLSQEKQQLLHLLEEPMSMEI 211
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPVT EELLKQQKL+SDET ITQQSVSDSHLAELQEKIQQ EATNKILQEKLNEMSCEL
Sbjct: 212 QPVT--EELLKQQKLDSDETIITQQSVSDSHLAELQEKIQQMEATNKILQEKLNEMSCEL 269
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KETLKSRE+ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 270 KSAQESSQKQDGTIQSLKETLKSRENETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 329
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
+GTSPAQQQ+ALLDLQS LF SQLEIQKLQR+VRQKERQL DAKRCV+FV
Sbjct: 330 QGTSPAQQQMALLDLQSGLFYSQLEIQKLQRLVRQKERQLADAKRCVQFVEAAAHEREQQ 389
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQGEL++KSQQL TLE EKCN IR EQHIQHLNHSLSHK
Sbjct: 390 KEASWKHNQELRKALQQLQGELESKSQQLRTLETEKCNEIRAHEQHIQHLNHSLSHKEQL 449
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRD SDKTL+ANEMLLEKLRQRIQDRDVALERAID RQ
Sbjct: 450 LQEFRELLQYRDKSDKTLEANEMLLEKLRQRIQDRDVALERAIDEKFSALEEKEKELRQF 509
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
HLAVRERDHDLERLR +LSSNEAT+QSMESLLRAKGLEVEQLSATCQNLQWL+EE ETKF
Sbjct: 510 HLAVRERDHDLERLRAILSSNEATMQSMESLLRAKGLEVEQLSATCQNLQWLKEEKETKF 569
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
SHWQKEQESIIQQLQTSLHDRNKEVEDLSATL CKLGPGQSE+AEELCQRLQRKERMLQ+
Sbjct: 570 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLFCKLGPGQSEVAEELCQRLQRKERMLQE 629
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LL+DRNKQAVE+E+EIQGLLQSMSTREQESQAAA KMVQALMERNSELQALRQYLGGKDF
Sbjct: 630 LLTDRNKQAVEHEIEIQGLLQSMSTREQESQAAAGKMVQALMERNSELQALRQYLGGKDF 689
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
+SQALISN+P EVTS SP LGEQTDQG +HIPS+DDS SLTAKGD SIPRSS GD DTV
Sbjct: 690 MVSQALISNQPTEVTSNSPRLGEQTDQGSVHIPSKDDSISLTAKGDTSIPRSSLGDQDTV 749
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +SR
Sbjct: 750 AGLEKELSNAKEELELMAKKERESR 774
>ref|XP_533026.2| PREDICTED: similar to phosphodiesterase 4D interacting protein
isoform 1 isoform 1 [Canis familiaris].
Length = 2347
Score = 885 bits (2288), Expect = 0.0
Identities = 475/625 (76%), Positives = 503/625 (80%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
E+VP D V P+QYTEALAQRDKRIEEL QSLA+ P ME+
Sbjct: 152 EEVPMDQVNPDQYTEALAQRDKRIEELHQSLASQEKLVEQLSQEKQQLLHLLEEPMSMEI 211
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPVT EELLKQQKL+SDET ITQQSVSDSHLAELQEKIQQ EATNKILQEKLNEMSCEL
Sbjct: 212 QPVT--EELLKQQKLDSDETIITQQSVSDSHLAELQEKIQQMEATNKILQEKLNEMSCEL 269
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KETLKSRE+ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 270 KSAQESSQKQDGTIQSLKETLKSRENETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 329
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
+GTSPAQQQ+ALLDLQS LF SQLEIQKLQR+VRQKERQL DAKRCV+FV
Sbjct: 330 QGTSPAQQQMALLDLQSGLFYSQLEIQKLQRLVRQKERQLADAKRCVQFVEAAAHEREQQ 389
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQGEL++KSQQL TLE EKCN IR EQHIQHLNHSLSHK
Sbjct: 390 KEASWKHNQELRKALQQLQGELESKSQQLRTLETEKCNEIRAHEQHIQHLNHSLSHKEQL 449
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRD SDKTL+ANEMLLEKLRQRIQDRDVALERAID RQ
Sbjct: 450 LQEFRELLQYRDKSDKTLEANEMLLEKLRQRIQDRDVALERAIDEKFSALEEKEKELRQF 509
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
HLAVRERDHDLERLR +LSSNEAT+QSMESLLRAKGLEVEQLSATCQNLQWL+EE ETKF
Sbjct: 510 HLAVRERDHDLERLRAILSSNEATMQSMESLLRAKGLEVEQLSATCQNLQWLKEEKETKF 569
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
SHWQKEQESIIQQLQTSLHDRNKEVEDLSATL CKLGPGQSE+AEELCQRLQRKERMLQ+
Sbjct: 570 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLFCKLGPGQSEVAEELCQRLQRKERMLQE 629
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LL+DRNKQAVE+E+EIQGLLQSMSTREQESQAAA KMVQALMERNSELQALRQYLGGKDF
Sbjct: 630 LLTDRNKQAVEHEIEIQGLLQSMSTREQESQAAAGKMVQALMERNSELQALRQYLGGKDF 689
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
+SQALISN+P EVTS SP LGEQTDQG +HIPS+DDS SLTAKGD SIPRSS GD DTV
Sbjct: 690 MVSQALISNQPTEVTSNSPRLGEQTDQGSVHIPSKDDSISLTAKGDTSIPRSSLGDQDTV 749
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +SR
Sbjct: 750 AGLEKELSNAKEELELMAKKERESR 774
>ref|XP_858426.1| PREDICTED: similar to phosphodiesterase 4D interacting protein
isoform 1 isoform 6 [Canis familiaris].
Length = 2229
Score = 840 bits (2170), Expect = 0.0
Identities = 447/568 (78%), Positives = 472/568 (83%)
Frame = +3
Query: 174 MEVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS 353
+ VQPVT EELLKQQKL+SDET ITQQSVSDSHLAELQEKIQQ EATNKILQEKLNEMS
Sbjct: 79 LRVQPVT--EELLKQQKLDSDETIITQQSVSDSHLAELQEKIQQMEATNKILQEKLNEMS 136
Query: 354 CELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQL 533
CEL TIQS KETLKSRE+ETEELYQVIEGQN+TMAKLREMLHQSQLGQL
Sbjct: 137 CELKSAQESSQKQDGTIQSLKETLKSRENETEELYQVIEGQNDTMAKLREMLHQSQLGQL 196
Query: 534 HTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXX 713
H+S+GTSPAQQQ+ALLDLQS LF SQLEIQKLQR+VRQKERQL DAKRCV+FV
Sbjct: 197 HSSQGTSPAQQQMALLDLQSGLFYSQLEIQKLQRLVRQKERQLADAKRCVQFVEAAAHER 256
Query: 714 XXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHK 893
SWKHNQELRKALQQLQGEL++KSQQL TLE EKCN IR EQHIQHLNHSLSHK
Sbjct: 257 EQQKEASWKHNQELRKALQQLQGELESKSQQLRTLETEKCNEIRAHEQHIQHLNHSLSHK 316
Query: 894 XXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXX 1073
YRD SDKTL+ANEMLLEKLRQRIQDRDVALERAID
Sbjct: 317 EQLLQEFRELLQYRDKSDKTLEANEMLLEKLRQRIQDRDVALERAIDEKFSALEEKEKEL 376
Query: 1074 RQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEME 1253
RQ HLAVRERDHDLERLR +LSSNEAT+QSMESLLRAKGLEVEQLSATCQNLQWL+EE E
Sbjct: 377 RQFHLAVRERDHDLERLRAILSSNEATMQSMESLLRAKGLEVEQLSATCQNLQWLKEEKE 436
Query: 1254 TKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERM 1433
TKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATL CKLGPGQSE+AEELCQRLQRKERM
Sbjct: 437 TKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLFCKLGPGQSEVAEELCQRLQRKERM 496
Query: 1434 LQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGG 1613
LQ+LL+DRNKQAVE+E+EIQGLLQSMSTREQESQAAA KMVQALMERNSELQALRQYLGG
Sbjct: 497 LQELLTDRNKQAVEHEIEIQGLLQSMSTREQESQAAAGKMVQALMERNSELQALRQYLGG 556
Query: 1614 KDFTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDL 1793
KDF +SQALISN+P EVTS SP LGEQTDQG +HIPS+DDS SLTAKGD SIPRSS GD
Sbjct: 557 KDFMVSQALISNQPTEVTSNSPRLGEQTDQGSVHIPSKDDSISLTAKGDTSIPRSSLGDQ 616
Query: 1794 DTVTGXXXXXXXXXXXXXXMAKKREKSR 1877
DTV G MAKK +SR
Sbjct: 617 DTVAGLEKELSNAKEELELMAKKERESR 644
>ref|NP_001107189.1| myosin-1 [Canis lupus familiaris].
Length = 1953
Score = 62.4 bits (150), Expect = 1e-09
Identities = 110/538 (20%), Positives = 204/538 (37%), Gaps = 18/538 (3%)
Frame = +3
Query: 210 LKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXX 389
L++ L + TA T + +AEL E+I + + L+++ +EM E+
Sbjct: 1196 LEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDD------- 1248
Query: 390 XXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQ 569
+ S ET+ + E++ + +E Q+ +L T E +QQ
Sbjct: 1249 ----LASNMETVSKAKGNLEKMCRTLE---------------DQVSELKTKE----EEQQ 1285
Query: 570 VALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQ 749
+ DL + Q E + R + +K+ ++ R Q
Sbjct: 1286 RLINDLTAQRARLQTESGEYSRQLDEKDSLVSQLSR-----------------GKLAFTQ 1328
Query: 750 ELRKALQQLQGELQNKSQQLHTLEAEK--CNAIRIQEQHIQHLNHSLSH--KXXXXXXXX 917
++ + +QL+ E++ KS H L++ + C+ +R Q + Q L
Sbjct: 1329 QIEELKRQLEEEIKAKSALAHALQSARHDCDLLREQYEEEQEGKAELQRAMSKANSEVAQ 1388
Query: 918 XXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVR 1097
Y ++ + + E +KL QR+QD
Sbjct: 1389 WRTKYETDAIQRTEELEEAKKKLAQRLQD------------------------------- 1417
Query: 1098 ERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQK 1277
+ +E + +S E T Q +++ + ++VE+ +A C L + + + W++
Sbjct: 1418 -AEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTNAACAALDKKQRNFDKILAEWKQ 1476
Query: 1278 EQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDR 1457
+ E +L+ S KE LS T L K+ E ++L + L+R+ + LQ +SD
Sbjct: 1477 KYEETHAELEAS----QKESRSLS-TELFKIKNAYEESLDQL-ETLKRENKNLQQEISDL 1530
Query: 1458 NKQAVEYEMEIQGLLQSMSTREQES---QAAAE-----------KMVQALMERNSELQAL 1595
+Q E I L + EQE QAA E K+++ +E N +
Sbjct: 1531 TEQIAEGGKRIHELEKIKKQVEQEKTELQAALEEAEASLEHEEGKILRIQLELNQVKSEI 1590
Query: 1596 RQYLGGKDFTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASI 1769
+ + KD + Q L N V S+ L + I SR+D+ L K + +
Sbjct: 1591 DRKIAEKDEEIDQ-LKRNHIRVVESMQSTLDAE-------IRSRNDAIRLKKKMEGDL 1640
Score = 59.7 bits (143), Expect = 9e-09
Identities = 93/483 (19%), Positives = 187/483 (38%), Gaps = 19/483 (3%)
Frame = +3
Query: 198 TEELLKQQKLNSDETAITQQ-SVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXX 374
T+ + + ++L + + Q+ ++ H+ + K E T + LQ ++ ++ ++
Sbjct: 1395 TDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTN 1454
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREML------HQSQLGQLH 536
++F + L + + EE + +E + L L ++ L QL
Sbjct: 1455 AACAALDKKQRNFDKILAEWKQKYEETHAELEASQKESRSLSTELFKIKNAYEESLDQLE 1514
Query: 537 TSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXX 716
T + + QQ + DL + I +L+++ +Q E++ T+ + +
Sbjct: 1515 TLKRENKNLQQ-EISDLTEQIAEGGKRIHELEKIKKQVEQEKTELQAALE---------- 1563
Query: 717 XXXXXSWKHNQ----ELRKALQQLQGELQNK-SQQLHTLEAEKCNAIRIQEQHIQHLNHS 881
S +H + ++ L Q++ E+ K +++ ++ K N IR+ E L+
Sbjct: 1564 -EAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDEEIDQLKRNHIRVVESMQSTLDAE 1622
Query: 882 LSHKXXXXXXXXXXXXYRDNSDKTLD-ANEMLLEKLRQR------IQDRDVALERAIDXX 1040
+ + + + L+ AN M E LR ++D + L+ A+
Sbjct: 1623 IRSRNDAIRLKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQGILKDTQIHLDDALRGQ 1682
Query: 1041 XXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATC 1220
R+ +L E +E LR L E + + E L V+ L
Sbjct: 1683 EDLKEQLAMVERRANLLQAE----IEELRATLEQTERSRKIAEQELLDASERVQLLHTQN 1738
Query: 1221 QNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEE 1400
+L ++++ET S Q E E IIQ+ + + K + D + +AEE
Sbjct: 1739 TSLINTKKKLETDISQIQGEMEDIIQEARNAEEKAKKAITDAAM------------MAEE 1786
Query: 1401 LCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNS 1580
L +KE QD + + E ++ L + EQ + +K +Q L R
Sbjct: 1787 L-----KKE---QDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVR 1838
Query: 1581 ELQ 1589
EL+
Sbjct: 1839 ELE 1841
>ref|XP_532649.2| PREDICTED: similar to Early endosome antigen 1 (Endosome-associated
protein p162) (Zinc finger FYVE domain containing protein
2) [Canis familiaris].
Length = 1514
Score = 60.8 bits (146), Expect = 4e-09
Identities = 111/582 (19%), Positives = 222/582 (38%), Gaps = 56/582 (9%)
Frame = +3
Query: 168 ADMEVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNE 347
AD++++ ++ EE LK++ NS E + H E Q Q T A + Q L +
Sbjct: 559 ADLQLK-LSRLEEQLKEKVTNSTELQHQLDKMKQQH-QEQQALQQSTTAKLREAQNDLEQ 616
Query: 348 MSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVI---EGQNETMAKLREMLH-- 512
+ ++ +Q KE + E E E+LY I EG+ + +L+E H
Sbjct: 617 VLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNHNL 676
Query: 513 QSQLGQL-----HTSEGTSPAQQQV--ALLDLQSALFCSQLEIQKLQRVVRQKERQLTDA 671
Q Q+ QL + SE AQ+ + + + ++ L +Q + L+ V + QL ++
Sbjct: 677 QEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSVNELNSQLNES 736
Query: 672 KRCVRF----VXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEK--- 830
K V + +L+ L Q LQ+K Q+L + +
Sbjct: 737 KEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDKQQELSKITTQLDQV 796
Query: 831 CNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDAN--------EMLLEKL 986
++ +++H L L + K L+A+ E L++L
Sbjct: 797 TTKLQDKQEHCSQLESHLKEYKEKHLSLEQKTEELEGQIKKLEADTLEVKGSKEQALQEL 856
Query: 987 RQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEAT---- 1154
+ + Q + LE + L ++++ LE ++ +L+ E
Sbjct: 857 QLQRQ-LNTDLELRVTELSKQLEMEKEIVSSTKLDLQKKSEALENIKQMLTEQEEEKKLL 915
Query: 1155 ---------------------IQSMESLLRAKGLEVE----QLSATCQNLQWLREEMETK 1259
IQ+ + L+ +E E +LSAT +N + E ++
Sbjct: 916 KREIENLSQDAKMQHKELNNKIQTAATELQKVKMEKETLMTELSATKENFSKVSESLKNS 975
Query: 1260 FSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQ 1439
S ++KE Q+ + ++ D K ++L L + E EL + L+++++
Sbjct: 976 KSEFEKEN----QKGKAAILDLEKTCKELKHQLQVQTENTLKE-QNELKKSLEKEKQTSH 1030
Query: 1440 DLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKD 1619
L + N + ++ Q L+ EQ+ Q ++ Q ++ +++AL
Sbjct: 1031 QLKLELNSVQGQV-VQAQNTLKQKEKEEQQLQGTINELKQLTEQKKKQIEAL-------- 1081
Query: 1620 FTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSL 1745
Q + ++ T + L +Q+ Q + + + S+
Sbjct: 1082 ----QGEVKTAISQKTELESKLQQQSTQAAQELTAEKEKMSV 1119
>ref|NP_001070263.1| myosin-2 [Canis lupus familiaris].
Length = 1940
Score = 60.5 bits (145), Expect = 6e-09
Identities = 107/536 (19%), Positives = 203/536 (37%), Gaps = 16/536 (2%)
Frame = +3
Query: 210 LKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXX 389
L++ L + TA T + +AEL E+I + + L+++ +EM E+
Sbjct: 1183 LEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDD------- 1235
Query: 390 XXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQ 569
+ S ET+ + E++ + +E Q + K +E Q + L T G
Sbjct: 1236 ----LASNVETVSKAKGNLEKMCRTLEDQVSEL-KSKEEEQQRLINDLTTQRGR------ 1284
Query: 570 VALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQ 749
L +S F QL+ +KE ++ R Q
Sbjct: 1285 ---LQTESGEFSRQLD---------EKEALVSQLSR-----------------GKLAFTQ 1315
Query: 750 ELRKALQQLQGELQNKSQQLHTLEAEK--CNAIRIQEQHIQHLNHSLSHKXXXXXXXXXX 923
++ + +QL+ E++ K+ H L++ + C+ +R Q + Q L
Sbjct: 1316 QIEELKRQLEEEIKAKNALAHALQSSRHDCDLLREQYEEEQESKAELQRALSKANSEVAQ 1375
Query: 924 XXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRER 1103
+ +D E LE+ ++++ R A E +
Sbjct: 1376 WRTKYETDAIQRTEE--LEEAKKKLAQRLQAAEEHV------------------------ 1409
Query: 1104 DHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQ 1283
E + +S E T Q +++ + L+VE+ +A C L + + + W+++
Sbjct: 1410 ----EAVNAKCASLEKTKQRLQNEVEDLMLDVERTNAACAALDKKQRNFDKILAEWKQKY 1465
Query: 1284 ESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNK 1463
E +L+ S KE L T L K+ E ++L + L+R+ + LQ +SD +
Sbjct: 1466 EETHAELEAS----QKEARSL-GTELFKMKNAYEESLDQL-ETLKRENKNLQQEISDLTE 1519
Query: 1464 QAVEYEM---EIQGLLQSMSTREQESQAAAE-----------KMVQALMERNSELQALRQ 1601
Q E E++ + + + + E QAA E K+++ +E N + +
Sbjct: 1520 QIAEGGKRIHELEKIKKQVEQEKSEIQAALEEAEASLEHEEGKILRIQLELNQVKSEIDR 1579
Query: 1602 YLGGKDFTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASI 1769
+ KD + Q L N V S+ L + I SR+D+ L K + +
Sbjct: 1580 KIAEKDEEIDQ-LKRNHIRVVESMQTMLDAE-------IRSRNDAIRLKKKMEGDL 1627
Score = 58.5 bits (140), Expect = 2e-08
Identities = 92/483 (19%), Positives = 187/483 (38%), Gaps = 19/483 (3%)
Frame = +3
Query: 198 TEELLKQQKLNSDETAITQQ-SVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXX 374
T+ + + ++L + + Q+ ++ H+ + K E T + LQ ++ ++ ++
Sbjct: 1382 TDAIQRTEELEEAKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQNEVEDLMLDVERTN 1441
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREML------HQSQLGQLH 536
++F + L + + EE + +E + L L ++ L QL
Sbjct: 1442 AACAALDKKQRNFDKILAEWKQKYEETHAELEASQKEARSLGTELFKMKNAYEESLDQLE 1501
Query: 537 TSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXX 716
T + + QQ + DL + I +L+++ +Q E++ ++ + +
Sbjct: 1502 TLKRENKNLQQ-EISDLTEQIAEGGKRIHELEKIKKQVEQEKSEIQAALE---------- 1550
Query: 717 XXXXXSWKHNQ----ELRKALQQLQGELQNK-SQQLHTLEAEKCNAIRIQEQHIQHLNHS 881
S +H + ++ L Q++ E+ K +++ ++ K N IR+ E L+
Sbjct: 1551 -EAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDEEIDQLKRNHIRVVESMQTMLDAE 1609
Query: 882 LSHKXXXXXXXXXXXXYRDNSDKTLD-ANEMLLEKLRQR------IQDRDVALERAIDXX 1040
+ + + + L+ AN M E LR ++D + L+ A+
Sbjct: 1610 IRSRNDAIRLKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQGILKDTQIHLDDALRGQ 1669
Query: 1041 XXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATC 1220
R+ +L E +E LR L E + + E L V+ L
Sbjct: 1670 EDLKEQLAMVERRANLLQAE----IEELRATLEQTERSRKIAEQELLDASERVQLLHTQN 1725
Query: 1221 QNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEE 1400
+L ++++ET S Q E E IIQ+ + + K + D + +AEE
Sbjct: 1726 TSLINTKKKLETDISQIQGEMEDIIQEARNAEEKAKKAITDAAM------------MAEE 1773
Query: 1401 LCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNS 1580
L +KE QD + + E ++ L + EQ + +K +Q L R
Sbjct: 1774 L-----KKE---QDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVR 1825
Query: 1581 ELQ 1589
EL+
Sbjct: 1826 ELE 1828
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 65,906,049
Number of extensions: 1625265
Number of successful extensions: 6527
Number of sequences better than 1.0e-05: 54
Number of HSP's gapped: 6271
Number of HSP's successfully gapped: 63
Length of query: 626
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 517
Effective length of database: 15,240,880
Effective search space: 7879534960
Effective search space used: 7879534960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009405
(1878 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003361065.1| PREDICTED: myomegalin-like, partial [Sus scr... 1001 0.0
Alignment gi|XP_003125862.2| PREDICTED: myomegalin-like, partial [Sus scr... 759 0.0
Alignment gi|XP_003355270.1| PREDICTED: myomegalin-like isoform 3 [Sus sc... 73 5e-13
Alignment gi|XP_001925616.3| PREDICTED: golgin subfamily A member 4 [Sus ... 71 2e-12
Alignment gi|XP_001929443.1| PREDICTED: centrosome-associated protein CEP... 67 3e-11
Alignment gi|XP_001928966.1| PREDICTED: kinesin-like protein KIF20B [Sus ... 62 8e-10
Alignment gi|NP_999301.1| myosin-2 [Sus scrofa]. 62 1e-09
Alignment gi|XP_001927973.2| PREDICTED: cingulin-like [Sus scrofa]. 60 3e-09
Alignment gi|XP_001926390.1| PREDICTED: early endosome antigen 1 [Sus scr... 60 4e-09
Alignment gi|NP_001098421.1| myosin-1 [Sus scrofa]. 57 3e-08
>ref|XP_003361065.1| PREDICTED: myomegalin-like, partial [Sus scrofa].
Length = 1883
Score = 1001 bits (2588), Expect = 0.0
Identities = 536/625 (85%), Positives = 537/625 (85%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAA PADMEV
Sbjct: 112 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAQEKLVEQLSQEKQQLQHLLEEPADMEV 171
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL
Sbjct: 172 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 231
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS
Sbjct: 232 KSAQQSSQKQDSTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 291
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFV
Sbjct: 292 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVEAAAEEREQQ 351
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHK
Sbjct: 352 KEASWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKEQL 411
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRDNSDKTLDANEMLLEKLRQRIQDRDVALERAID RQL
Sbjct: 412 LQEFRELLQYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDEKFSSLEEKEKELRQL 471
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF
Sbjct: 472 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 531
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD
Sbjct: 532 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 591
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF
Sbjct: 592 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 651
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSS GDLDTV
Sbjct: 652 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSGGDLDTV 711
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
TG MAKK +SR
Sbjct: 712 TGLEKELSSAKEELELMAKKERESR 736
>ref|XP_003125862.2| PREDICTED: myomegalin-like, partial [Sus scrofa].
Length = 825
Score = 759 bits (1960), Expect = 0.0
Identities = 402/454 (88%), Positives = 403/454 (88%)
Frame = +3
Query: 174 MEVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS 353
+ VQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS
Sbjct: 372 LRVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS 431
Query: 354 CELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQL 533
CEL TIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQL
Sbjct: 432 CELKSAQQSSQKQDSTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQL 491
Query: 534 HTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXX 713
HTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFV
Sbjct: 492 HTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVEAAAEER 551
Query: 714 XXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHK 893
SWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHK
Sbjct: 552 EQQKEASWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHK 611
Query: 894 XXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXX 1073
YRDNSDKTLDANEMLLEKLRQRIQDRDVALERAID
Sbjct: 612 EQLLQEFRELLQYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDEKFSSLEEKEKEL 671
Query: 1074 RQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEME 1253
RQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEME
Sbjct: 672 RQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEME 731
Query: 1254 TKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERM 1433
TKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERM
Sbjct: 732 TKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERM 791
Query: 1434 LQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQ 1535
LQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQ
Sbjct: 792 LQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQ 825
>ref|XP_003355270.1| PREDICTED: myomegalin-like isoform 3 [Sus scrofa].
Length = 284
Score = 73.2 bits (178), Expect = 5e-13
Identities = 40/61 (65%), Positives = 40/61 (65%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAA PADMEV
Sbjct: 152 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAQEKLVEQLSQEKQQLQHLLEEPADMEV 211
Query: 183 Q 185
Q
Sbjct: 212 Q 212
>ref|XP_001925616.3| PREDICTED: golgin subfamily A member 4 [Sus scrofa].
Length = 2243
Score = 71.2 bits (173), Expect = 2e-12
Identities = 110/545 (20%), Positives = 220/545 (40%), Gaps = 71/545 (13%)
Frame = +3
Query: 180 VQPVTMTEELLKQQKLNSDETAI--------TQQSVSDSHL---AELQEKIQQTEATNKI 326
++ +T E L++QK S+ A T Q ++ AE+ E+I+ E T++
Sbjct: 412 IKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKMKAEMDEQIKAIEKTSEE 471
Query: 327 ----LQEKLNEMSCELXXXXXXXXXXXXTIQS-FKETLKSRESETEELYQVIEGQNETMA 491
LQ++L+ + E+ +Q +E L S++ E E +Q E E
Sbjct: 472 ERIRLQQELSLVKQEVVDVMKKSSEQITKLQKRHEEDLASKDQELAEKFQAQE--REFQE 529
Query: 492 KLREMLHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDA 671
++R L +SQ SE Q++ + Q +L +LE+QK + ++ + E +L D
Sbjct: 530 QMRVALEKSQ------SEYLKITQEK----EQQESLALEELELQK-KAILTESENKLRDL 578
Query: 672 KRCVRFVXXXXXXXXXXXXXSW-------------------KHNQELRKALQQLQGELQN 794
++ S KHN+E+ +++ + EL+N
Sbjct: 579 QQEAETYRTRILELESSLDKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELEN 638
Query: 795 KSQQLHTLEAEKCNAIRIQ-EQHIQHLNHSLSHKXXXXXXXXXXXXY---RDNSDKTL-- 956
Q +L EK ++ + E ++ L + ++ ++KTL
Sbjct: 639 LQHQQDSLWTEKLQVLKQEHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEK 698
Query: 957 -DANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHD-LERLRG 1130
D + LE L + + + ++ + ++L + E+ +D +++
Sbjct: 699 LDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDS 758
Query: 1131 VLSSNEATIQSMES-----------LLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQK 1277
++ E +IQ E LL+ K +++ A +NL E + K S +
Sbjct: 759 IIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENL-----EADVKRSEGEL 813
Query: 1278 EQES----IIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIA-------------EELC 1406
+Q S + Q Q+S H++ K E+ A L KL ++E +++C
Sbjct: 814 QQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDIC 873
Query: 1407 QRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSEL 1586
L + +QDL+ KQ E E ++ L Q ++ +++ E+ Q L+E+ + +
Sbjct: 874 TELDTHKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENII 933
Query: 1587 QALRQ 1601
+R+
Sbjct: 934 LQMRE 938
Score = 65.1 bits (157), Expect = 1e-10
Identities = 108/577 (18%), Positives = 223/577 (38%), Gaps = 59/577 (10%)
Frame = +3
Query: 201 EELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXX 380
++ L++ K S+E AI ++ + H E+ +++ + + LQ + + + E
Sbjct: 597 DKSLQENKNQSEELAINLEAEKNKHNKEITIMVEKHKTELENLQHQQDSLWTE------- 649
Query: 381 XXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPA 560
+Q K+ E+E E+L + E + ET+ K +E+L Q+ + +++
Sbjct: 650 ------KLQVLKQ---EHETEMEKLREKFEQEKETLLKDKEILFQAHIQEMNEKTLEKLD 700
Query: 561 QQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWK 740
+Q L L S L KLQ + + Q K+ + S
Sbjct: 701 VKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQELEAKLDEQKNDHQQQVDSII 760
Query: 741 HNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXXXXXXXX 920
QE+ ++Q+ + L+++ QL L EK ++ + +++L +
Sbjct: 761 KEQEM--SIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVENLEADVKRSEGELQQASA 818
Query: 921 XXX----YRDNSDKTLDANEMLLEKLRQRIQDRD---VALERAIDXXXXXXXXXXXXXRQ 1079
++ ++ + A E L +L+Q++ D + + L + +D
Sbjct: 819 KLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILLTKQVDEVETRKKDICTELDT 878
Query: 1080 LHLAVRERDHDLERLRGVLSSNEATI-QSMESLLRAKGLEVEQ----------------- 1205
+ V++ LE+ + ++ Q ES L+ +E EQ
Sbjct: 879 HKIQVQDLMQQLEKQNSEMEERVKSLTQRYESQLKDNNVEQEQTKQLLLEKENIILQMRE 938
Query: 1206 ------------LSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLS 1349
LSA ++ L+EE ETKF + +K+ E + Q+ + K++ D
Sbjct: 939 GQSKEIEILQQKLSAKEDSVHVLQEEYETKFRNQEKKMEKVKQKAKEMQETLKKKLLDQE 998
Query: 1350 ATL-------LCKLGPGQSEIAEELCQRLQRKERMLQDLLS---DRNKQAVE-----YEM 1484
A L +L + + ++ + Q + D +S K+ +E +
Sbjct: 999 AKLKKELENTALELSQKEKQFNAKILEMAQANSAGINDAVSRLETNQKEQIESLTEVHRR 1058
Query: 1485 EIQGLLQSMSTR-EQESQAAAEKMVQALMERNSELQALRQYL-----GGKDFTMSQALIS 1646
E+ ++ + Q+++ EK L ER E+ L+Q + ++ + A +
Sbjct: 1059 ELNDVISVWERKLNQQAEELQEKHEIQLQEREQEIAELKQKILVFGCEKEEMSKEMAWLR 1118
Query: 1647 NRPAEVTSISPHLGEQTDQGLMHIPS-RDDSTSLTAK 1754
+ ++ L EQ DQ H+ S + T+L AK
Sbjct: 1119 EEGVKRDTVLKELQEQLDQKATHMDSLSQNETNLKAK 1155
>ref|XP_001929443.1| PREDICTED: centrosome-associated protein CEP250 isoform 1 [Sus
scrofa].
Length = 2440
Score = 67.0 bits (162), Expect = 3e-11
Identities = 128/619 (20%), Positives = 239/619 (38%), Gaps = 91/619 (14%)
Frame = +3
Query: 174 MEVQPVTMTEELLKQQKLNSDETAITQQSVS-DSHLAELQ---EKIQQTEATNKILQEKL 341
+E Q T+ EEL Q+++ A+T ++ + ELQ +I++ E+ N +L +L
Sbjct: 1569 IECQQKTI-EELEGQREMQ--RAALTHLTLDLEERSQELQVQGSQIRELESHNSLLAREL 1625
Query: 342 NEMSCELXXXXXXXXXXXXTIQSFKETLKSRESET---EELYQVIEGQNETMAKL----- 497
E E+ + + LK RE E +E QV+E Q K+
Sbjct: 1626 QEKDQEMTSQQDQTEELQRQKEHLTQDLKRREQEIVLLKERIQVLEDQRTLQTKILEEDL 1685
Query: 498 -----------REMLHQSQLGQLHTSEGTSPAQQQ--------VALLDLQSALFCSQLEI 620
R++ Q QL Q EG ++ Q + L D + + C Q I
Sbjct: 1686 EQIKMSLRERGRDLASQRQLMQERAEEGKGQSKAQRGSLEHMKLILRDKEKEVECQQEHI 1745
Query: 621 QKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELR-------------- 758
Q+LQ Q E+QL R + +H QE R
Sbjct: 1746 QELQEHKAQLEQQLQGLHRKMGETSLLLTQREQEIVALQRHLQEAREQGELKEQSLQGQL 1805
Query: 759 --------------KALQQLQ------------GELQNKSQQLHTLEAEKCNAIRIQEQH 860
KALQQ Q G LQ + +Q H E+ + ++H
Sbjct: 1806 EEAQRALARRDQELKALQQQQAQGQEENVMEKAGLLQRELEQAHVTLKERQAELEDYKEH 1865
Query: 861 IQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXX 1040
++ L L+ + + + A E +L LR ++++ AL
Sbjct: 1866 VRRLQEELAVE-----------------GQRVQALEEVLSDLRAESREQEKAL------- 1901
Query: 1041 XXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSME---SLLRAKGLEVE-QL 1208
+Q +E + + L+ EA ++ + LRA+GL + +
Sbjct: 1902 -------LALQQQCAEQAQEHEAEARALQDSWLQAEAMLKERDQELEALRAEGLSSQHRE 1954
Query: 1209 SATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSE 1388
A C ++ L+E + + Q++++ ++ Q++ S + +E +ATL L Q++
Sbjct: 1955 EAACGQVEALQEALSKAQADLQEKEQHLLGQVELS-----RSLEASTATLQAALDSCQAQ 2009
Query: 1389 IAEELCQRLQRKE--------------RMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQ 1526
+ +L + L+++E + LQ L+ R+++ + + Q L +S++ R Q
Sbjct: 2010 -SRQLEEALRKREGEVQVRDLRYQEAMQQLQQALTQRDEELRQQRKQGQLLEKSLAQRGQ 2068
Query: 1527 ESQAAAEKMVQALMERNSELQALRQYLGGKDFTMSQALISNRPAEVTSISPHLGEQTDQG 1706
E A EK E+++LR+ L T++Q + E+ + ++ +
Sbjct: 2069 E-DATQEKQEAKHEREEEEIRSLRESLQELQLTLAQ-----KEEEILELREAQQRKSLED 2122
Query: 1707 LMH--IPSRDDSTSLTAKG 1757
L H P ++ +T+ + G
Sbjct: 2123 LSHKGCPGKEPATTFDSLG 2141
Score = 64.7 bits (156), Expect = 2e-10
Identities = 99/488 (20%), Positives = 201/488 (41%), Gaps = 24/488 (4%)
Frame = +3
Query: 285 LQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQV 464
LQE+ + A K LQE L ++ +TL RE E E L
Sbjct: 1405 LQEQGELKVAQGKALQENLARLT---------------------QTLSEREGEVETL--- 1440
Query: 465 IEGQNETMAKLREM----LHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQ 632
+G+ + + K REM L L ++ Q+Q+ L+ ++ ++ L
Sbjct: 1441 -QGKIQELEKQREMQKAALEVLSLDLKKRNQEVDLQQEQIQELEECRSV------LEHLP 1493
Query: 633 RVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLH 812
V+++E++LT + ++ + ++ + ++ +G++Q+ +QL
Sbjct: 1494 MAVQEREQKLTLQREQIKELEKDRETQRNILEHQLLELEKKAQVIESQKGQIQDLKKQLV 1553
Query: 813 TLEAEKCNAIRIQEQH---------IQHL-------NHSLSHKXXXXXXXXXXXXYRDNS 944
TLE C A+ ++E H I+ L +L+H + +
Sbjct: 1554 TLE---CLALELEENHHKIECQQKTIEELEGQREMQRAALTHLTLDLEERSQELQVQGSQ 1610
Query: 945 DKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLERL 1124
+ L+++ LL + +Q++D + D + L RE++ L +
Sbjct: 1611 IRELESHNSLLAR---ELQEKDQEMTSQQDQTEELQRQKEHLTQDLKR--REQEIVLLKE 1665
Query: 1125 RGVLSSNEATIQS--MESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESIIQ 1298
R + ++ T+Q+ +E L + + + + + L +E + K Q ++
Sbjct: 1666 RIQVLEDQRTLQTKILEEDLEQIKMSLRERGRDLASQRQLMQERAEEGKGQSKAQRGSLE 1725
Query: 1299 QLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEY 1478
++ L D+ KEVE + +L ++++ ++L Q L RK LL+ R ++ V
Sbjct: 1726 HMKLILRDKEKEVE-CQQEHIQELQEHKAQLEQQL-QGLHRKMGETSLLLTQREQEIVAL 1783
Query: 1479 EMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQY--LGGKDFTMSQALISNR 1652
+ +Q + +EQ Q E+ +AL R+ EL+AL+Q G ++ M +A + R
Sbjct: 1784 QRHLQEAREQGELKEQSLQGQLEEAQRALARRDQELKALQQQQAQGQEENVMEKAGLLQR 1843
Query: 1653 PAEVTSIS 1676
E ++
Sbjct: 1844 ELEQAHVT 1851
Score = 58.5 bits (140), Expect = 1e-08
Identities = 111/469 (23%), Positives = 188/469 (40%), Gaps = 18/469 (3%)
Frame = +3
Query: 249 TQQSVSDSHLAELQEKIQ---QTEATNKILQEKLNEMSCELXXXXXXXXXXXXTIQSFKE 419
TQ+ ++H QE IQ Q + LQ+++ E+S L +++ +E
Sbjct: 254 TQELEKEAHKRS-QELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMVKALRE 312
Query: 420 TLKSRESETEELYQVIEGQNETMAKLREMLHQ--SQLGQLHTSEGTSPAQQQ--VALLDL 587
T+K E+ EL + + + R L Q + Q EG AQ LDL
Sbjct: 313 TMKILEANHAELMEHEASLSRNAQEERLSLQQVIKDITQAMVEEGDHMAQGSGHEHSLDL 372
Query: 588 QSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKAL 767
+ F SQ + Q+ + + LT ++ V Q+L++ L
Sbjct: 373 DPSGFFSQFDSQQPDKALTLVRSVLTQRRQAV---------------------QDLKQQL 411
Query: 768 QQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXY-RDNS 944
Q + + QQ H E E+ A+R + Q + +L+ + R+
Sbjct: 412 SGCQEAVSSLQQQHHQWE-EEGEALRQRLQKLTGERDTLAGQTVGLQGEVDSLSRERELL 470
Query: 945 DKTLDANEMLLEKLRQ---RIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDL 1115
KT + + LE L Q R++ ++ L+ D +LHLAVRER
Sbjct: 471 QKTREELQQQLEVLEQEAWRLRRTNMELQLQGDSAQGEKEEQQ---EELHLAVRER---- 523
Query: 1116 ERLRGVLSSNEA-TIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESI 1292
ERL+ +L+S EA +S+ L+ + E L ++ + LR+E + K ++SI
Sbjct: 524 ERLQEMLASLEAKQSESLSELITLR----EALESSRLEGELLRQEQTEVTAVLAKAEQSI 579
Query: 1293 IQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAV 1472
+ +L +S + EV DL A + KL +A + N+Q +
Sbjct: 580 V-ELSSSENSLKAEVADLRAAAV-KLSALNEALALDKV---------------GLNQQLL 622
Query: 1473 EYEMEIQGLLQSMSTREQESQ------AAAEKMVQALMERNSELQALRQ 1601
+ E + Q + M EQ A E+ +AL E+N+ L+A Q
Sbjct: 623 QLEQQNQSVCSRMEAAEQARSALQVGLAEVERSREALWEKNTYLEAQLQ 671
>ref|XP_001928966.1| PREDICTED: kinesin-like protein KIF20B [Sus scrofa].
Length = 1787
Score = 62.4 bits (150), Expect = 8e-10
Identities = 98/461 (21%), Positives = 191/461 (41%), Gaps = 15/461 (3%)
Frame = +3
Query: 297 IQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQ 476
+++ E+ + L+E+L E + L + + + S + + +EL ++E Q
Sbjct: 1080 LKEKESLIQQLKEELQEKTVNLDVQVQHVVEGKRVLSELTQDVTSYKVKIQELEALLETQ 1139
Query: 477 NETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKL-QRVVRQKE 653
E ++ +QL Q + + +Q+ L + Q+ L S + L +R VR KE
Sbjct: 1140 KEKCSR------SAQLEQEILEKESIILKQERNLKEFQANLQDSIKNAKDLSEREVRLKE 1193
Query: 654 R------QLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKAL-------QQLQGELQN 794
L DAK ++ +W+ ++L++AL Q L+ +LQ
Sbjct: 1194 EVTRLTNNLQDAKHSLQV-------KEEERETNWQEIEKLKEALSVSSALTQNLKVDLQR 1246
Query: 795 KSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEML 974
K + ++ + +A R EQ + ++ + ++ + +D +
Sbjct: 1247 KEEDYAEVKEKLADAKRQIEQVQKEVSVMRDDEKLLRVKINDLEKKKNQCSEEIDMKQRT 1306
Query: 975 LEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEAT 1154
+++L++++ ++ V E AI L+V+E+ +E +R L E T
Sbjct: 1307 IQQLKEQLNNQKV--EEAIQQYERVCKD---------LSVKEKI--IEDMRMTLEEQEQT 1353
Query: 1155 IQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDR-NK 1331
+ +L AK E E+L+ T+ W+++ + L+T ++R NK
Sbjct: 1354 QVEQDQVLEAKLEEAERLA--------------TELEKWKEK----CKDLETKSNERSNK 1395
Query: 1332 EVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSM 1511
E+ED + L KL Q E+ E Q +DR K E M I ++
Sbjct: 1396 ELEDNTDILNIKLSKLQDELQES-----------EQKYKADRKKWLEEKMMLITQAKEAE 1444
Query: 1512 STREQESQAAAEKMVQALMERNSELQALRQYLGGKDFTMSQ 1634
R +E + AE L ++N E++ L++ L KD ++ Q
Sbjct: 1445 DLRNKEMKKYAEDREHCLKQQN-EMEILKEQLAKKDGSLQQ 1484
>ref|NP_999301.1| myosin-2 [Sus scrofa].
Length = 1939
Score = 61.6 bits (148), Expect = 1e-09
Identities = 106/518 (20%), Positives = 200/518 (38%), Gaps = 22/518 (4%)
Frame = +3
Query: 282 ELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQ 461
+L+E Q EAT L++K + EL +Q K+ L+ +SE +
Sbjct: 1181 DLEEATLQHEATAAALRKKHADSVAELGEQID-------NLQRVKQKLEKEKSEMKMEID 1233
Query: 462 VIEGQNETMAKLREMLH------QSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQ 623
+ ET++K + L + QL +L + E +QQ + DL + Q E
Sbjct: 1234 DLASNMETVSKAKGNLEKMCRTLEDQLSELKSKE----EEQQRLINDLTAQRGRLQTESG 1289
Query: 624 KLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQ 803
+ R + +KE ++ R + Q++ + +QL+ E++ K+
Sbjct: 1290 EFSRQLDEKEALVSQLSR-----------------GKQAYTQQIEELKRQLEEEIKAKNA 1332
Query: 804 QLHTLEAEK--CNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLL 977
H L++ + C+ +R Q + Q L + +D E L
Sbjct: 1333 LAHALQSSRHDCDLLREQYEEEQESKAELQRALSKANTEVAQWRTKYETDAIQRTEE--L 1390
Query: 978 EKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATI 1157
E+ ++++ R A E + E + +S E T
Sbjct: 1391 EEAKKKLAQRLQAAEEHV----------------------------EAVNAKCASLEKTK 1422
Query: 1158 QSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEV 1337
Q +++ + L+VE+ +A C L + + + W+++ E +L+ S KE
Sbjct: 1423 QRLQNEVEDLMLDVERTNAACAALDKKQRNFDKILAEWKQKYEETHAELEAS----QKEA 1478
Query: 1338 EDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEYEM---EIQGLLQS 1508
L T L K+ E ++L + L+R+ + LQ +SD +Q E E++ + +
Sbjct: 1479 RSL-GTELFKMKNAYEESLDQL-ETLKRENKNLQQEISDLTEQIAEGGKRIHELEKIKKQ 1536
Query: 1509 MSTREQESQAAAE-----------KMVQALMERNSELQALRQYLGGKDFTMSQALISNRP 1655
+ + E QAA E K+++ +E N + + + KD + Q L N
Sbjct: 1537 VEQEKSEIQAALEEAEASLEHEEGKILRIQLELNQVKSEVDRKIAEKDEEIDQ-LKRNHV 1595
Query: 1656 AEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASI 1769
V S+ L + I SR+D+ L K + +
Sbjct: 1596 RVVESMQSMLDAE-------IRSRNDAIRLKKKMEGDL 1626
>ref|XP_001927973.2| PREDICTED: cingulin-like [Sus scrofa].
Length = 1196
Score = 60.5 bits (145), Expect = 3e-09
Identities = 108/486 (22%), Positives = 197/486 (40%), Gaps = 22/486 (4%)
Frame = +3
Query: 201 EELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXX 380
E++ +Q + ++++ + Q + H A L+ + Q+ A + LQ +L E S E
Sbjct: 512 EQVRQQYQRDAEQLRRSMQDATQDHAA-LEAERQKMSALVRGLQRELEETSEETGHWQNM 570
Query: 381 XXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPA 560
Q KE L++ + E +L E E + + E+L Q +LGQ G +
Sbjct: 571 -------FQKNKEELRATKQELLQLRMEKEEMEEELGEKIEVL-QRELGQARAGAGDT-- 620
Query: 561 QQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWK 740
+QV +L+ L +Q E++ LQ +++ Q K R + +
Sbjct: 621 -RQVE--ELKKELRQTQEELKDLQA---EQQSQEVAGKHRERELEKQLKVEAERGRGLEQ 674
Query: 741 HNQELRKALQQLQGELQNKSQQLHTLEAE------KCNAIRIQEQHIQHLNHSLSHKXXX 902
N +L+K LQQL+ + + S+ EAE + A+ + Q N +
Sbjct: 675 QNLQLQKTLQQLRQDCEEASKAQMAAEAEAAVLGQRRTAVETTLRETQEENDEFRRRILG 734
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
+ +A L +K+ QR++ LE A++ R L
Sbjct: 735 LEQQLKEARGLAEGGEVAEAR--LRDKV-QRLEAEKQRLEEALNTAQEEEGSLAAAKRAL 791
Query: 1083 HLAVRERDHDLERL----RGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEM 1250
+ E L RL + + + E + E+L R+K EQ + + L +E+
Sbjct: 792 EARLEEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLDRTVDRLNKEL 851
Query: 1251 ETKFSHWQKEQESIIQQLQTSLHD----RNKEVEDLS------ATLLCKLGPGQSEIAEE 1400
E + + +Q+LQ+ L D +EV D A+ K G S + +E
Sbjct: 852 E----QIGDDSKQALQELQSQLEDYKEKARREVADAQRQAKEWASEAEKTSGGLSRLQDE 907
Query: 1401 LCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGL--LQSMSTREQESQAAAEKMVQALMER 1574
QR + LQ +DR+ ++ E+ Q L L+ + ++ SQ + +++L E+
Sbjct: 908 ----TQRLRQALQASQADRDTARLDKELLAQRLQGLEQEAENKKRSQDDKSRQLKSLEEK 963
Query: 1575 NSELQA 1592
S L+A
Sbjct: 964 VSRLEA 969
>ref|XP_001926390.1| PREDICTED: early endosome antigen 1 [Sus scrofa].
Length = 1410
Score = 60.1 bits (144), Expect = 4e-09
Identities = 110/582 (18%), Positives = 218/582 (37%), Gaps = 56/582 (9%)
Frame = +3
Query: 168 ADMEVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNE 347
AD++++ ++ EE LK++ NS E H E Q Q T A + Q L +
Sbjct: 455 ADLQLK-LSRLEEELKEKVANSTELQHQLDKTKQQH-QEQQALQQSTTAKLREAQNDLEQ 512
Query: 348 MSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVI---EGQNETMAKLREMLH-- 512
+ ++ +Q KE + E E E+LY I EG+ + +L+E H
Sbjct: 513 VLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNHIL 572
Query: 513 QSQLGQL-----HTSEGTSPAQQQV--ALLDLQSALFCSQLEIQKLQRVVRQKERQLTDA 671
Q Q+ QL + SE AQ+ + + + ++ L +Q + L+ + + QL ++
Sbjct: 573 QEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLEASISELSSQLNES 632
Query: 672 KRCVRF----VXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEK--- 830
K V + +L+ L Q LQ+K Q+L+ + +
Sbjct: 633 KEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDKQQELNKITTQLDQV 692
Query: 831 CNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDAN--------EMLLEKL 986
++ +++H L L + K L+A+ E L+ L
Sbjct: 693 TTKLQDKQEHCGQLESHLKEYKEKHLSLEQKTEELEGQIKKLEADSLEVKASKEQALQDL 752
Query: 987 RQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNE------ 1148
+Q+ Q + LE L ++++ LE ++ +L+ E
Sbjct: 753 QQQRQ-LNTDLELRATELSKQLEMEKETVSSTKLDLQKKSEALENIKQMLTKQEEEKKIL 811
Query: 1149 -----------------------ATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETK 1259
A + ++ + K V +LSA + L + + ++
Sbjct: 812 KQEVENLSQNAKMQQKELNNKIQAAVTELQKVKMEKETLVTELSAAKEKLSKVSDSLKNS 871
Query: 1260 FSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQ 1439
S ++KE Q+ + ++ D K +DL L ++ + +++ L+
Sbjct: 872 KSEFEKES----QKGKAAILDLEKTCKDLKHQLQVQI------------ESAHKEQNELK 915
Query: 1440 DLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKD 1619
+ L + + + ++EI +Q T+ Q S EK Q L +EL+ L + K
Sbjct: 916 NSLEKEKETSHQLKLEINS-MQGQLTQAQNSLKQKEKEEQQLQGNINELKQLTEQ-KKKQ 973
Query: 1620 FTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSL 1745
Q + ++ T + L +Q+ Q + + + S+
Sbjct: 974 IEALQGEVKIAVSQKTELENKLQQQSTQAAQELAAEKEKISV 1015
>ref|NP_001098421.1| myosin-1 [Sus scrofa].
Length = 1939
Score = 57.4 bits (137), Expect = 3e-08
Identities = 91/483 (18%), Positives = 187/483 (38%), Gaps = 19/483 (3%)
Frame = +3
Query: 198 TEELLKQQKLNSDETAITQQ-SVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXX 374
T+ + + ++L + + Q+ ++ H+ + K E T + LQ ++ ++ ++
Sbjct: 1381 TDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERSN 1440
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREML------HQSQLGQLH 536
++F + L + + EE + +E + L L ++ L QL
Sbjct: 1441 AACAALDKKQRNFDKILAEWKQKYEETHAELEASQKESRSLSTELFKVKNAYEESLDQLE 1500
Query: 537 TSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXX 716
T + + QQ + DL + I +L+++ +Q E++ ++ + +
Sbjct: 1501 TLKRENKNLQQ-EISDLTEQIAEGGKRIHELEKIKKQVEQEKSEIQAALE---------- 1549
Query: 717 XXXXXSWKHNQ----ELRKALQQLQGELQNK-SQQLHTLEAEKCNAIRIQEQHIQHLNHS 881
S +H + ++ L Q++ E+ K +++ ++ K N +R+ E L+
Sbjct: 1550 -EAEASLEHEEGKILRIQLELNQVKSEVDRKIAEKDEEIDQLKRNHVRVVESMQSMLDAE 1608
Query: 882 LSHKXXXXXXXXXXXXYRDNSDKTLD-ANEMLLEKLRQR------IQDRDVALERAIDXX 1040
+ + + + L+ AN M E LR ++D + L+ A+
Sbjct: 1609 IRSRNDAIRLKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQGILKDTQIHLDDALRSQ 1668
Query: 1041 XXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATC 1220
R+ +L E +E LR L E + + E L V+ L
Sbjct: 1669 EDLKEQLAMVERRANLLQAE----IEELRATLEQTERSRKVAEQELLDASERVQLLHTQN 1724
Query: 1221 QNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEE 1400
+L ++++ET S Q E E IIQ+ + + K + D + +AEE
Sbjct: 1725 TSLINTKKKLETDISQIQGEMEDIIQEARNAEEKAKKAITDAAM------------MAEE 1772
Query: 1401 LCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNS 1580
L +KE QD + + E ++ L + EQ + +K +Q L R
Sbjct: 1773 L-----KKE---QDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVR 1824
Query: 1581 ELQ 1589
EL+
Sbjct: 1825 ELE 1827
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 40,659,365
Number of extensions: 1012215
Number of successful extensions: 3937
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 3838
Number of HSP's successfully gapped: 32
Length of query: 626
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 521
Effective length of database: 8,729,747
Effective search space: 4548198187
Effective search space used: 4548198187
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009405
(1878 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001103633.1| myomegalin isoform 4 [Mus musculus]. 818 0.0
Alignment gi|NP_001034465.2| myomegalin isoform 1 [Mus musculus]. 818 0.0
Alignment gi|NP_835181.2| myomegalin isoform 2 [Mus musculus]. 771 0.0
Alignment gi|NP_109604.1| myosin-1 [Mus musculus]. 60 4e-09
Alignment gi|NP_001123472.1| centrosome-associated protein CEP250 isoform... 60 8e-09
Alignment gi|NP_001123471.1| centrosome-associated protein CEP250 isoform... 60 8e-09
Alignment gi|NP_796191.2| centrosome-associated protein CEP250 isoform 1 ... 60 8e-09
Alignment gi|NP_032409.3| centrosome-associated protein CEP250 isoform 1 ... 60 8e-09
Alignment gi|NP_001034634.2| myosin heavy chain IIa [Mus musculus]. 59 1e-08
Alignment gi|NP_032503.2| kinectin [Mus musculus]. 58 3e-08
>ref|NP_001103633.1| myomegalin isoform 4 [Mus musculus].
Length = 2326
Score = 818 bits (2114), Expect = 0.0
Identities = 444/626 (70%), Positives = 483/626 (77%), Gaps = 1/626 (0%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
ED GD +P+QY+EALAQRD+RIEEL QSLAA PA MEV
Sbjct: 152 EDAAGDQEKPDQYSEALAQRDRRIEELRQSLAAQEGLVEQLSQEKRQLLHLLEEPASMEV 211
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPV + L QQK + ET TQ VS+SHLAELQ+KIQQTEATNKILQEKLN++SCEL
Sbjct: 212 QPVP--KGLPTQQKPDLHETPTTQPPVSESHLAELQDKIQQTEATNKILQEKLNDLSCEL 269
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KE LKSRESETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 270 KSAQESSQKQDTTIQSLKEMLKSRESETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 329
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
EG +PAQQQVALLDLQSALFCSQLEIQ+LQR+VRQKERQL D KRCV+ V
Sbjct: 330 EGIAPAQQQVALLDLQSALFCSQLEIQRLQRLVRQKERQLADGKRCVQLVEAAAQEREHQ 389
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
+WKHNQELRKALQ LQGEL +KSQQLH LEAEK N IR Q Q+IQHL+HSLSHK
Sbjct: 390 KEAAWKHNQELRKALQHLQGELHSKSQQLHVLEAEKYNEIRTQGQNIQHLSHSLSHKEQL 449
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRDN+DKTLD NE+ LEKLRQRIQDR VALER ID RQL
Sbjct: 450 IQELQELLQYRDNADKTLDTNEVFLEKLRQRIQDRAVALERVIDEKFSALEEKDKELRQL 509
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
LAVR+RDHDLERLR VLS+NEAT+QSMESLLRA+GLEVEQL+ATCQNLQWL+EE+ETKF
Sbjct: 510 RLAVRDRDHDLERLRCVLSANEATMQSMESLLRARGLEVEQLTATCQNLQWLKEELETKF 569
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
HWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSE+AEELCQRLQRKERMLQD
Sbjct: 570 GHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEVAEELCQRLQRKERMLQD 629
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKD- 1619
LLSDRNKQAVE+EMEIQGLLQSM TREQE QAAAEKMVQA MERNSELQALRQYLGGK+
Sbjct: 630 LLSDRNKQAVEHEMEIQGLLQSMGTREQERQAAAEKMVQAFMERNSELQALRQYLGGKEL 689
Query: 1620 FTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDT 1799
T SQ ISN+PA VTSI PH GEQTDQG M +PSRDDSTSLTA+ +ASIPRS+ GD DT
Sbjct: 690 MTSSQTFISNQPAGVTSIGPHHGEQTDQGSMQMPSRDDSTSLTAREEASIPRSTLGDSDT 749
Query: 1800 VTGXXXXXXXXXXXXXXMAKKREKSR 1877
V G MAKK +S+
Sbjct: 750 VAGLEKELSNAKEELELMAKKERESQ 775
>ref|NP_001034465.2| myomegalin isoform 1 [Mus musculus].
Length = 2446
Score = 818 bits (2114), Expect = 0.0
Identities = 444/626 (70%), Positives = 483/626 (77%), Gaps = 1/626 (0%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
ED GD +P+QY+EALAQRD+RIEEL QSLAA PA MEV
Sbjct: 272 EDAAGDQEKPDQYSEALAQRDRRIEELRQSLAAQEGLVEQLSQEKRQLLHLLEEPASMEV 331
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPV + L QQK + ET TQ VS+SHLAELQ+KIQQTEATNKILQEKLN++SCEL
Sbjct: 332 QPVP--KGLPTQQKPDLHETPTTQPPVSESHLAELQDKIQQTEATNKILQEKLNDLSCEL 389
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KE LKSRESETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 390 KSAQESSQKQDTTIQSLKEMLKSRESETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 449
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
EG +PAQQQVALLDLQSALFCSQLEIQ+LQR+VRQKERQL D KRCV+ V
Sbjct: 450 EGIAPAQQQVALLDLQSALFCSQLEIQRLQRLVRQKERQLADGKRCVQLVEAAAQEREHQ 509
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
+WKHNQELRKALQ LQGEL +KSQQLH LEAEK N IR Q Q+IQHL+HSLSHK
Sbjct: 510 KEAAWKHNQELRKALQHLQGELHSKSQQLHVLEAEKYNEIRTQGQNIQHLSHSLSHKEQL 569
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRDN+DKTLD NE+ LEKLRQRIQDR VALER ID RQL
Sbjct: 570 IQELQELLQYRDNADKTLDTNEVFLEKLRQRIQDRAVALERVIDEKFSALEEKDKELRQL 629
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
LAVR+RDHDLERLR VLS+NEAT+QSMESLLRA+GLEVEQL+ATCQNLQWL+EE+ETKF
Sbjct: 630 RLAVRDRDHDLERLRCVLSANEATMQSMESLLRARGLEVEQLTATCQNLQWLKEELETKF 689
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
HWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSE+AEELCQRLQRKERMLQD
Sbjct: 690 GHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEVAEELCQRLQRKERMLQD 749
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKD- 1619
LLSDRNKQAVE+EMEIQGLLQSM TREQE QAAAEKMVQA MERNSELQALRQYLGGK+
Sbjct: 750 LLSDRNKQAVEHEMEIQGLLQSMGTREQERQAAAEKMVQAFMERNSELQALRQYLGGKEL 809
Query: 1620 FTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDT 1799
T SQ ISN+PA VTSI PH GEQTDQG M +PSRDDSTSLTA+ +ASIPRS+ GD DT
Sbjct: 810 MTSSQTFISNQPAGVTSIGPHHGEQTDQGSMQMPSRDDSTSLTAREEASIPRSTLGDSDT 869
Query: 1800 VTGXXXXXXXXXXXXXXMAKKREKSR 1877
V G MAKK +S+
Sbjct: 870 VAGLEKELSNAKEELELMAKKERESQ 895
>ref|NP_835181.2| myomegalin isoform 2 [Mus musculus].
Length = 1118
Score = 771 bits (1991), Expect = 0.0
Identities = 415/566 (73%), Positives = 450/566 (79%), Gaps = 1/566 (0%)
Frame = +3
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QPV + L QQK + ET TQ VS+SHLAELQ+KIQQTEATNKILQEKLN++SCEL
Sbjct: 375 QPVP--KGLPTQQKPDLHETPTTQPPVSESHLAELQDKIQQTEATNKILQEKLNDLSCEL 432
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQS KE LKSRESETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 433 KSAQESSQKQDTTIQSLKEMLKSRESETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 492
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
EG +PAQQQVALLDLQSALFCSQLEIQ+LQR+VRQKERQL D KRCV+ V
Sbjct: 493 EGIAPAQQQVALLDLQSALFCSQLEIQRLQRLVRQKERQLADGKRCVQLVEAAAQEREHQ 552
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
+WKHNQELRKALQ LQGEL +KSQQLH LEAEK N IR Q Q+IQHL+HSLSHK
Sbjct: 553 KEAAWKHNQELRKALQHLQGELHSKSQQLHVLEAEKYNEIRTQGQNIQHLSHSLSHKEQL 612
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRDN+DKTLD NE+ LEKLRQRIQDR VALER ID RQL
Sbjct: 613 IQELQELLQYRDNADKTLDTNEVFLEKLRQRIQDRAVALERVIDEKFSALEEKDKELRQL 672
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
LAVR+RDHDLERLR VLS+NEAT+QSMESLLRA+GLEVEQL+ATCQNLQWL+EE+ETKF
Sbjct: 673 RLAVRDRDHDLERLRCVLSANEATMQSMESLLRARGLEVEQLTATCQNLQWLKEELETKF 732
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
HWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSE+AEELCQRLQRKERMLQD
Sbjct: 733 GHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEVAEELCQRLQRKERMLQD 792
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKD- 1619
LLSDRNKQAVE+EMEIQGLLQSM TREQE QAAAEKMVQA MERNSELQALRQYLGGK+
Sbjct: 793 LLSDRNKQAVEHEMEIQGLLQSMGTREQERQAAAEKMVQAFMERNSELQALRQYLGGKEL 852
Query: 1620 FTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDT 1799
T SQ ISN+PA VTSI PH GEQTDQG M +PSRDDSTSLTA+ +ASIPRS+ GD DT
Sbjct: 853 MTSSQTFISNQPAGVTSIGPHHGEQTDQGSMQMPSRDDSTSLTAREEASIPRSTLGDSDT 912
Query: 1800 VTGXXXXXXXXXXXXXXMAKKREKSR 1877
V G MAKK +S+
Sbjct: 913 VAGLEKELSNAKEELELMAKKERESQ 938
>ref|NP_109604.1| myosin-1 [Mus musculus].
Length = 1942
Score = 60.5 bits (145), Expect = 4e-09
Identities = 103/514 (20%), Positives = 195/514 (37%), Gaps = 18/514 (3%)
Frame = +3
Query: 282 ELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQ 461
+L+E Q EAT L++K + EL ++ K +K + +
Sbjct: 1184 DLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNME 1243
Query: 462 VIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVV 641
VI + K+ L + Q+ +L T E +QQ + +L + Q E + R +
Sbjct: 1244 VISKSKGNLEKMCRTL-EDQVSELKTKE----EEQQRLINELTAQRGRLQTESGEYSRQL 1298
Query: 642 RQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLE 821
+K+ ++ R Q++ + +QL+ E++ KS H L+
Sbjct: 1299 DEKDSLVSQLSR-----------------GKQAFTQQIEELKRQLEEEIKAKSALAHALQ 1341
Query: 822 AEK--CNAIRIQEQHIQHLNHSLSH--KXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLR 989
+ + C+ +R Q + Q L Y ++ + + E +KL
Sbjct: 1342 SSRHDCDLLREQYEEEQEAKAELQRAMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLA 1401
Query: 990 QRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSME 1169
QR+QD + +E + +S E T Q ++
Sbjct: 1402 QRLQD--------------------------------AEEHVEAVNAKCASLEKTKQRLQ 1429
Query: 1170 SLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLS 1349
+ + ++VE+ +A C L + + + W+++ E +L+ S KE LS
Sbjct: 1430 NEVEDLMIDVERTNAACAALDKKQRNFDKILAEWKQKYEETHAELEAS----QKESRSLS 1485
Query: 1350 ATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEYEM---EIQGLLQSMSTR 1520
T L K+ E + L + L+R+ + LQ +SD +Q E E++ + + +
Sbjct: 1486 -TELFKIKNAYEESLDHL-ETLKRENKNLQQEISDLTEQIAEGGKRIHELEKIKKQIEQE 1543
Query: 1521 EQESQAAAE-----------KMVQALMERNSELQALRQYLGGKDFTMSQALISNRPAEVT 1667
+ E QAA E K+++ +E N + + + KD + Q L N V
Sbjct: 1544 KSELQAALEEAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDEEIDQ-LKRNHIRVVE 1602
Query: 1668 SISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASI 1769
S+ L + I SR+D+ L K + +
Sbjct: 1603 SMQSTLDAE-------IRSRNDAIRLKKKMEGDL 1629
Score = 53.5 bits (127), Expect = 5e-07
Identities = 89/483 (18%), Positives = 186/483 (38%), Gaps = 19/483 (3%)
Frame = +3
Query: 198 TEELLKQQKLNSDETAITQQ-SVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXX 374
T+ + + ++L + + Q+ ++ H+ + K E T + LQ ++ ++ ++
Sbjct: 1384 TDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTN 1443
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREML------HQSQLGQLH 536
++F + L + + EE + +E + L L ++ L L
Sbjct: 1444 AACAALDKKQRNFDKILAEWKQKYEETHAELEASQKESRSLSTELFKIKNAYEESLDHLE 1503
Query: 537 TSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXX 716
T + + QQ + DL + I +L+++ +Q E++ ++ + +
Sbjct: 1504 TLKRENKNLQQ-EISDLTEQIAEGGKRIHELEKIKKQIEQEKSELQAALE---------- 1552
Query: 717 XXXXXSWKHNQ----ELRKALQQLQGELQNK-SQQLHTLEAEKCNAIRIQEQHIQHLNHS 881
S +H + ++ L Q++ E+ K +++ ++ K N IR+ E L+
Sbjct: 1553 -EAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDEEIDQLKRNHIRVVESMQSTLDAE 1611
Query: 882 LSHKXXXXXXXXXXXXYRDNSDKTLD-ANEMLLEKLRQR------IQDRDVALERAIDXX 1040
+ + + + L+ +N M E LR ++D + L+ A+
Sbjct: 1612 IRSRNDAIRLKKKMEGDLNEMEIQLNHSNRMAAEALRNYRNTQGILKDTQLHLDDALRGQ 1671
Query: 1041 XXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATC 1220
R+ +L E +E LR L E + + E L V+ L
Sbjct: 1672 EDLKEQLAMVERRANLLQAE----IEELRATLEQTERSRKIAEQELLDASERVQLLHTQN 1727
Query: 1221 QNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEE 1400
+L ++++ET S Q E E I+Q+ + + K + D + +AEE
Sbjct: 1728 TSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAKKAITDAAM------------MAEE 1775
Query: 1401 LCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNS 1580
L +KE QD + + E ++ L + EQ + +K +Q L R
Sbjct: 1776 L-----KKE---QDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVR 1827
Query: 1581 ELQ 1589
EL+
Sbjct: 1828 ELE 1830
>ref|NP_001123472.1| centrosome-associated protein CEP250 isoform 3 [Mus musculus].
Length = 2435
Score = 59.7 bits (143), Expect = 8e-09
Identities = 108/529 (20%), Positives = 199/529 (37%), Gaps = 51/529 (9%)
Frame = +3
Query: 168 ADMEVQPVTMTEELLK--QQKLNSD----ETAITQQSVSDSHLAELQEKIQQTEATNKIL 329
A+++ ELL+ ++KL++ + + + A L+E ++ + K+
Sbjct: 1345 AELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLK 1404
Query: 330 QEKLN---EMSCELXXXXXXXXXXXXTIQS----FKETLKSRESETEELY---QVIEGQN 479
E+L E + L +Q +TL +RE E E L Q +E Q
Sbjct: 1405 NEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQR 1464
Query: 480 ETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQ 659
E E+L L S Q+Q+ L+ ++ ++ L V+++E++
Sbjct: 1465 EMQKAALELL---SLDLKKRSREVDLQQEQIQELEQCRSV------LEHLPMAVQEREQK 1515
Query: 660 LTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNA 839
L+ + +R + ++ + ++ +G++Q+ +QL TLE C A
Sbjct: 1516 LSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLE---CLA 1572
Query: 840 IRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVAL 1019
+ ++E H HK ++ K + E E R + + L
Sbjct: 1573 LELEESH---------HKV-------------ESQQKMITELEGQREMQRVALTHLTLDL 1610
Query: 1020 E-RAIDXXXXXXXXXXXXXRQLHLA--VRERDHDLERLRGVLSSNEATIQSMESLLRAKG 1190
E R+ + HLA ++ERD ++ R + + + + L KG
Sbjct: 1611 EERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKG 1670
Query: 1191 LEVEQLSATCQNLQ-------------------WLREEMETKFSHWQ------------- 1274
E+ Q L+ LRE + S WQ
Sbjct: 1671 QELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPS 1730
Query: 1275 KEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSD 1454
K Q ++ L+ L D+ KEVE + +L ++ ++L Q L RK LL+
Sbjct: 1731 KGQRGSLEHLKLILRDKEKEVE-CQQERIQELQGHMGQLEQQL-QGLHRKVGETSLLLTH 1788
Query: 1455 RNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQ 1601
R ++ + +Q + REQ Q E+ + L +R+ EL+ LRQ
Sbjct: 1789 REQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQ 1837
Score = 55.5 bits (132), Expect = 1e-07
Identities = 112/500 (22%), Positives = 193/500 (38%), Gaps = 37/500 (7%)
Frame = +3
Query: 219 QKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQE---KLNEMSCELXXXXXXXXX 389
++L +D A Q+SV + L +L++K Q E+ +Q+ +L + C
Sbjct: 1524 RELENDREA--QRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHK 1581
Query: 390 XXXTIQSFKETLKSRESETEELYQV---IEGQNETMAKLREMLHQSQLGQLHTS------ 542
+ E RE + L + +E +++ + LH+ + H +
Sbjct: 1582 VESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQER 1641
Query: 543 -EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKER-QLTDAKRCVRFVXXXXXXXX 716
+ + +QQ+ L Q LE +K Q +V QKER Q+ + +R ++
Sbjct: 1642 DQEVTSQRQQIDELQKQQEQLAQALE-RKGQELVLQKERIQVLEDQRTLQTKILEEDLEQ 1700
Query: 717 XXXXXSWKHNQELRKALQQL--------------QGELQNKSQQLHTLEAE-KCNAIRIQ 851
+ +QEL Q + +G L++ L E E +C RIQ
Sbjct: 1701 IKHSLR-ERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQ 1759
Query: 852 EQ--HIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALER 1025
E H+ L L +R+ TL + L++ +++ + R+ L+
Sbjct: 1760 ELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQH---LQEAKEQGELREQVLQG 1816
Query: 1026 AIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQ 1205
++ Q LA +RDH+LE LR + +SM+ A +EQ
Sbjct: 1817 QLEEA------------QRDLA--QRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ 1862
Query: 1206 LSATCQNLQWLREEMETKFSHWQKEQE---SIIQQLQTSLHDRNKEVEDLSATLLCKLGP 1376
AT + Q EE + Q+E E ++ L+ L D E + +L
Sbjct: 1863 AHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLAL--- 1919
Query: 1377 GQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGL-LQSMSTREQESQAA--AE 1547
Q AE+ Q + + R LQD E E E+ L ++ +R QE A AE
Sbjct: 1920 -QQRCAEQ-AQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAE 1977
Query: 1548 KMVQALMERNSELQALRQYL 1607
+ +AL + + LQ Q L
Sbjct: 1978 ALQEALSKAQAALQEKEQSL 1997
>ref|NP_001123471.1| centrosome-associated protein CEP250 isoform 2 [Mus musculus].
Length = 2434
Score = 59.7 bits (143), Expect = 8e-09
Identities = 108/529 (20%), Positives = 199/529 (37%), Gaps = 51/529 (9%)
Frame = +3
Query: 168 ADMEVQPVTMTEELLK--QQKLNSD----ETAITQQSVSDSHLAELQEKIQQTEATNKIL 329
A+++ ELL+ ++KL++ + + + A L+E ++ + K+
Sbjct: 1344 AELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLK 1403
Query: 330 QEKLN---EMSCELXXXXXXXXXXXXTIQS----FKETLKSRESETEELY---QVIEGQN 479
E+L E + L +Q +TL +RE E E L Q +E Q
Sbjct: 1404 NEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQR 1463
Query: 480 ETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQ 659
E E+L L S Q+Q+ L+ ++ ++ L V+++E++
Sbjct: 1464 EMQKAALELL---SLDLKKRSREVDLQQEQIQELEQCRSV------LEHLPMAVQEREQK 1514
Query: 660 LTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNA 839
L+ + +R + ++ + ++ +G++Q+ +QL TLE C A
Sbjct: 1515 LSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLE---CLA 1571
Query: 840 IRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVAL 1019
+ ++E H HK ++ K + E E R + + L
Sbjct: 1572 LELEESH---------HKV-------------ESQQKMITELEGQREMQRVALTHLTLDL 1609
Query: 1020 E-RAIDXXXXXXXXXXXXXRQLHLA--VRERDHDLERLRGVLSSNEATIQSMESLLRAKG 1190
E R+ + HLA ++ERD ++ R + + + + L KG
Sbjct: 1610 EERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKG 1669
Query: 1191 LEVEQLSATCQNLQ-------------------WLREEMETKFSHWQ------------- 1274
E+ Q L+ LRE + S WQ
Sbjct: 1670 QELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPS 1729
Query: 1275 KEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSD 1454
K Q ++ L+ L D+ KEVE + +L ++ ++L Q L RK LL+
Sbjct: 1730 KGQRGSLEHLKLILRDKEKEVE-CQQERIQELQGHMGQLEQQL-QGLHRKVGETSLLLTH 1787
Query: 1455 RNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQ 1601
R ++ + +Q + REQ Q E+ + L +R+ EL+ LRQ
Sbjct: 1788 REQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQ 1836
Score = 55.5 bits (132), Expect = 1e-07
Identities = 112/500 (22%), Positives = 193/500 (38%), Gaps = 37/500 (7%)
Frame = +3
Query: 219 QKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQE---KLNEMSCELXXXXXXXXX 389
++L +D A Q+SV + L +L++K Q E+ +Q+ +L + C
Sbjct: 1523 RELENDREA--QRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHK 1580
Query: 390 XXXTIQSFKETLKSRESETEELYQV---IEGQNETMAKLREMLHQSQLGQLHTS------ 542
+ E RE + L + +E +++ + LH+ + H +
Sbjct: 1581 VESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQER 1640
Query: 543 -EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKER-QLTDAKRCVRFVXXXXXXXX 716
+ + +QQ+ L Q LE +K Q +V QKER Q+ + +R ++
Sbjct: 1641 DQEVTSQRQQIDELQKQQEQLAQALE-RKGQELVLQKERIQVLEDQRTLQTKILEEDLEQ 1699
Query: 717 XXXXXSWKHNQELRKALQQL--------------QGELQNKSQQLHTLEAE-KCNAIRIQ 851
+ +QEL Q + +G L++ L E E +C RIQ
Sbjct: 1700 IKHSLR-ERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQ 1758
Query: 852 EQ--HIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALER 1025
E H+ L L +R+ TL + L++ +++ + R+ L+
Sbjct: 1759 ELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQH---LQEAKEQGELREQVLQG 1815
Query: 1026 AIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQ 1205
++ Q LA +RDH+LE LR + +SM+ A +EQ
Sbjct: 1816 QLEEA------------QRDLA--QRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ 1861
Query: 1206 LSATCQNLQWLREEMETKFSHWQKEQE---SIIQQLQTSLHDRNKEVEDLSATLLCKLGP 1376
AT + Q EE + Q+E E ++ L+ L D E + +L
Sbjct: 1862 AHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLAL--- 1918
Query: 1377 GQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGL-LQSMSTREQESQAA--AE 1547
Q AE+ Q + + R LQD E E E+ L ++ +R QE A AE
Sbjct: 1919 -QQRCAEQ-AQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAE 1976
Query: 1548 KMVQALMERNSELQALRQYL 1607
+ +AL + + LQ Q L
Sbjct: 1977 ALQEALSKAQAALQEKEQSL 1996
Score = 52.0 bits (123), Expect = 2e-06
Identities = 113/488 (23%), Positives = 194/488 (39%), Gaps = 20/488 (4%)
Frame = +3
Query: 189 VTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEAT---NKILQEKLNEMSCE 359
V T+ L K+ S E + +S D AELQ+++ + A ++ E +M
Sbjct: 249 VAKTQALEKEAHEKSQEL-MQLKSHGDLEKAELQDRVTELSALLTQSQKQNEDYEKMVKA 307
Query: 360 LXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQL-GQLH 536
L ++ ++ + E L QVI+ + +A + E +Q G
Sbjct: 308 LRETMEILTNHAELMEHEASLSRNAQEEKLSLQQVIKAITQALASVEEEDTVTQSSGHED 367
Query: 537 TSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXX 716
+ + Q D AL Q + + Q+ V+ +QL+ + + F+
Sbjct: 368 SLQSDCNGLSQFDPQDPDRALTLVQSVLTRRQQAVQDLRQQLSGCQEAMSFLQQQHD--- 424
Query: 717 XXXXXSWKHN-QELRKALQQLQGELQNKSQQLHTLEAE------KCNAIRIQEQHIQHLN 875
W+ + LR+ LQ+L GE + Q L+ E + +A+ Q +Q
Sbjct: 425 -----QWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEV 479
Query: 876 HSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQ---RIQDRDVALERAIDXXXX 1046
SLS + R+ K + LE L Q R++ ++ L+ D
Sbjct: 480 DSLSRE-------------RELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQG 526
Query: 1047 XXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQN 1226
+LHLAVRER+ E L G+ + ++ + +L A LE +L
Sbjct: 527 EKLEQQ---EELHLAVRERERLQETLVGLEAKQSESLSELLTLREA--LESSRLEG---- 577
Query: 1227 LQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIA---E 1397
+ L++E + + ++SI+ +L S + EV DL A + KLG +A
Sbjct: 578 -ELLKQERVEVAAALARAEQSIV-ELSGSENSLKAEVADLRAAAV-KLGALNEALALDKV 634
Query: 1398 ELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQ---ESQAAAEKMVQALM 1568
EL Q+L + E+ Q L S R + A + +Q L R + E + E +Q
Sbjct: 635 ELNQQLLQLEQENQSLCS-RVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAE 693
Query: 1569 ERNSELQA 1592
E +ELQA
Sbjct: 694 EAGAELQA 701
>ref|NP_796191.2| centrosome-associated protein CEP250 isoform 1 [Mus musculus].
Length = 2414
Score = 59.7 bits (143), Expect = 8e-09
Identities = 108/529 (20%), Positives = 199/529 (37%), Gaps = 51/529 (9%)
Frame = +3
Query: 168 ADMEVQPVTMTEELLK--QQKLNSD----ETAITQQSVSDSHLAELQEKIQQTEATNKIL 329
A+++ ELL+ ++KL++ + + + A L+E ++ + K+
Sbjct: 1324 AELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLK 1383
Query: 330 QEKLN---EMSCELXXXXXXXXXXXXTIQS----FKETLKSRESETEELY---QVIEGQN 479
E+L E + L +Q +TL +RE E E L Q +E Q
Sbjct: 1384 NEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQR 1443
Query: 480 ETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQ 659
E E+L L S Q+Q+ L+ ++ ++ L V+++E++
Sbjct: 1444 EMQKAALELL---SLDLKKRSREVDLQQEQIQELEQCRSV------LEHLPMAVQEREQK 1494
Query: 660 LTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNA 839
L+ + +R + ++ + ++ +G++Q+ +QL TLE C A
Sbjct: 1495 LSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLE---CLA 1551
Query: 840 IRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVAL 1019
+ ++E H HK ++ K + E E R + + L
Sbjct: 1552 LELEESH---------HKV-------------ESQQKMITELEGQREMQRVALTHLTLDL 1589
Query: 1020 E-RAIDXXXXXXXXXXXXXRQLHLA--VRERDHDLERLRGVLSSNEATIQSMESLLRAKG 1190
E R+ + HLA ++ERD ++ R + + + + L KG
Sbjct: 1590 EERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKG 1649
Query: 1191 LEVEQLSATCQNLQ-------------------WLREEMETKFSHWQ------------- 1274
E+ Q L+ LRE + S WQ
Sbjct: 1650 QELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPS 1709
Query: 1275 KEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSD 1454
K Q ++ L+ L D+ KEVE + +L ++ ++L Q L RK LL+
Sbjct: 1710 KGQRGSLEHLKLILRDKEKEVE-CQQERIQELQGHMGQLEQQL-QGLHRKVGETSLLLTH 1767
Query: 1455 RNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQ 1601
R ++ + +Q + REQ Q E+ + L +R+ EL+ LRQ
Sbjct: 1768 REQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQ 1816
Score = 55.5 bits (132), Expect = 1e-07
Identities = 112/500 (22%), Positives = 193/500 (38%), Gaps = 37/500 (7%)
Frame = +3
Query: 219 QKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQE---KLNEMSCELXXXXXXXXX 389
++L +D A Q+SV + L +L++K Q E+ +Q+ +L + C
Sbjct: 1503 RELENDREA--QRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHK 1560
Query: 390 XXXTIQSFKETLKSRESETEELYQV---IEGQNETMAKLREMLHQSQLGQLHTS------ 542
+ E RE + L + +E +++ + LH+ + H +
Sbjct: 1561 VESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQER 1620
Query: 543 -EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKER-QLTDAKRCVRFVXXXXXXXX 716
+ + +QQ+ L Q LE +K Q +V QKER Q+ + +R ++
Sbjct: 1621 DQEVTSQRQQIDELQKQQEQLAQALE-RKGQELVLQKERIQVLEDQRTLQTKILEEDLEQ 1679
Query: 717 XXXXXSWKHNQELRKALQQL--------------QGELQNKSQQLHTLEAE-KCNAIRIQ 851
+ +QEL Q + +G L++ L E E +C RIQ
Sbjct: 1680 IKHSLR-ERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQ 1738
Query: 852 EQ--HIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALER 1025
E H+ L L +R+ TL + L++ +++ + R+ L+
Sbjct: 1739 ELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQH---LQEAKEQGELREQVLQG 1795
Query: 1026 AIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQ 1205
++ Q LA +RDH+LE LR + +SM+ A +EQ
Sbjct: 1796 QLEEA------------QRDLA--QRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ 1841
Query: 1206 LSATCQNLQWLREEMETKFSHWQKEQE---SIIQQLQTSLHDRNKEVEDLSATLLCKLGP 1376
AT + Q EE + Q+E E ++ L+ L D E + +L
Sbjct: 1842 AHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLAL--- 1898
Query: 1377 GQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGL-LQSMSTREQESQAA--AE 1547
Q AE+ Q + + R LQD E E E+ L ++ +R QE A AE
Sbjct: 1899 -QQRCAEQ-AQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAE 1956
Query: 1548 KMVQALMERNSELQALRQYL 1607
+ +AL + + LQ Q L
Sbjct: 1957 ALQEALSKAQAALQEKEQSL 1976
>ref|NP_032409.3| centrosome-associated protein CEP250 isoform 1 [Mus musculus].
Length = 2414
Score = 59.7 bits (143), Expect = 8e-09
Identities = 108/529 (20%), Positives = 199/529 (37%), Gaps = 51/529 (9%)
Frame = +3
Query: 168 ADMEVQPVTMTEELLK--QQKLNSD----ETAITQQSVSDSHLAELQEKIQQTEATNKIL 329
A+++ ELL+ ++KL++ + + + A L+E ++ + K+
Sbjct: 1324 AELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLK 1383
Query: 330 QEKLN---EMSCELXXXXXXXXXXXXTIQS----FKETLKSRESETEELY---QVIEGQN 479
E+L E + L +Q +TL +RE E E L Q +E Q
Sbjct: 1384 NEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQR 1443
Query: 480 ETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQ 659
E E+L L S Q+Q+ L+ ++ ++ L V+++E++
Sbjct: 1444 EMQKAALELL---SLDLKKRSREVDLQQEQIQELEQCRSV------LEHLPMAVQEREQK 1494
Query: 660 LTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNA 839
L+ + +R + ++ + ++ +G++Q+ +QL TLE C A
Sbjct: 1495 LSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLE---CLA 1551
Query: 840 IRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVAL 1019
+ ++E H HK ++ K + E E R + + L
Sbjct: 1552 LELEESH---------HKV-------------ESQQKMITELEGQREMQRVALTHLTLDL 1589
Query: 1020 E-RAIDXXXXXXXXXXXXXRQLHLA--VRERDHDLERLRGVLSSNEATIQSMESLLRAKG 1190
E R+ + HLA ++ERD ++ R + + + + L KG
Sbjct: 1590 EERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKG 1649
Query: 1191 LEVEQLSATCQNLQ-------------------WLREEMETKFSHWQ------------- 1274
E+ Q L+ LRE + S WQ
Sbjct: 1650 QELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPS 1709
Query: 1275 KEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSD 1454
K Q ++ L+ L D+ KEVE + +L ++ ++L Q L RK LL+
Sbjct: 1710 KGQRGSLEHLKLILRDKEKEVE-CQQERIQELQGHMGQLEQQL-QGLHRKVGETSLLLTH 1767
Query: 1455 RNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQ 1601
R ++ + +Q + REQ Q E+ + L +R+ EL+ LRQ
Sbjct: 1768 REQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQ 1816
Score = 55.5 bits (132), Expect = 1e-07
Identities = 112/500 (22%), Positives = 193/500 (38%), Gaps = 37/500 (7%)
Frame = +3
Query: 219 QKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQE---KLNEMSCELXXXXXXXXX 389
++L +D A Q+SV + L +L++K Q E+ +Q+ +L + C
Sbjct: 1503 RELENDREA--QRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHK 1560
Query: 390 XXXTIQSFKETLKSRESETEELYQV---IEGQNETMAKLREMLHQSQLGQLHTS------ 542
+ E RE + L + +E +++ + LH+ + H +
Sbjct: 1561 VESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQER 1620
Query: 543 -EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKER-QLTDAKRCVRFVXXXXXXXX 716
+ + +QQ+ L Q LE +K Q +V QKER Q+ + +R ++
Sbjct: 1621 DQEVTSQRQQIDELQKQQEQLAQALE-RKGQELVLQKERIQVLEDQRTLQTKILEEDLEQ 1679
Query: 717 XXXXXSWKHNQELRKALQQL--------------QGELQNKSQQLHTLEAE-KCNAIRIQ 851
+ +QEL Q + +G L++ L E E +C RIQ
Sbjct: 1680 IKHSLR-ERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQ 1738
Query: 852 EQ--HIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALER 1025
E H+ L L +R+ TL + L++ +++ + R+ L+
Sbjct: 1739 ELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQH---LQEAKEQGELREQVLQG 1795
Query: 1026 AIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQ 1205
++ Q LA +RDH+LE LR + +SM+ A +EQ
Sbjct: 1796 QLEEA------------QRDLA--QRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ 1841
Query: 1206 LSATCQNLQWLREEMETKFSHWQKEQE---SIIQQLQTSLHDRNKEVEDLSATLLCKLGP 1376
AT + Q EE + Q+E E ++ L+ L D E + +L
Sbjct: 1842 AHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLAL--- 1898
Query: 1377 GQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGL-LQSMSTREQESQAA--AE 1547
Q AE+ Q + + R LQD E E E+ L ++ +R QE A AE
Sbjct: 1899 -QQRCAEQ-AQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAE 1956
Query: 1548 KMVQALMERNSELQALRQYL 1607
+ +AL + + LQ Q L
Sbjct: 1957 ALQEALSKAQAALQEKEQSL 1976
>ref|NP_001034634.2| myosin heavy chain IIa [Mus musculus].
Length = 1942
Score = 59.3 bits (142), Expect = 1e-08
Identities = 94/464 (20%), Positives = 175/464 (37%), Gaps = 5/464 (1%)
Frame = +3
Query: 210 LKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXX 389
L++ L + TA T + +AEL E+I + + L+++ +EM E+
Sbjct: 1185 LEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDD------- 1237
Query: 390 XXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQ 569
+ S ET+ + E++ + +E Q + K +E Q + L T G
Sbjct: 1238 ----LASNVETVSKAKGNLEKMCRTLEDQVSEL-KSKEEEQQRLINDLTTQRGR------ 1286
Query: 570 VALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQ 749
L +S F QL+ +KE ++ R Q
Sbjct: 1287 ---LQTESGEFSRQLD---------EKEALVSQLSR-----------------GKQAFTQ 1317
Query: 750 ELRKALQQLQGELQNKSQQLHTLEAEK--CNAIRIQEQHIQHLNHSLSHKXXXXXXXXXX 923
++ + +QL+ E++ K+ H L++ + C+ +R Q + Q L
Sbjct: 1318 QIEELKRQLEEEVKAKNALAHALQSSRHDCDLLREQYEEEQESKAELQRALSKANSEVAQ 1377
Query: 924 XXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRER 1103
+ +D E LE+ ++++ R A E +
Sbjct: 1378 WRTKYETDAIQRTEE--LEEAKKKLAQRLQAAEEHV------------------------ 1411
Query: 1104 DHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQ 1283
E + +S E T Q +++ + L+VE+ +A C L + + + W+++
Sbjct: 1412 ----EAVNAKCASLEKTKQRLQNEVEDLMLDVERTNAACAALDKKQRNFDKILAEWKQKY 1467
Query: 1284 ESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNK 1463
E +L+ S KE L T L K+ E ++L + L+R+ + LQ +SD +
Sbjct: 1468 EETHAELEAS----QKEARSL-GTELFKMKNAYEESLDQL-ETLKRENKNLQQEISDLTE 1521
Query: 1464 QAVEYEMEIQGLLQSMSTREQES---QAAAEKMVQALMERNSEL 1586
Q E I L + EQE QAA E+ +L ++
Sbjct: 1522 QIAEGGKRIHELEKIKKQVEQEKCELQAALEEAEASLEHEEGKI 1565
Score = 55.1 bits (131), Expect = 2e-07
Identities = 90/483 (18%), Positives = 186/483 (38%), Gaps = 19/483 (3%)
Frame = +3
Query: 198 TEELLKQQKLNSDETAITQQ-SVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXX 374
T+ + + ++L + + Q+ ++ H+ + K E T + LQ ++ ++ ++
Sbjct: 1384 TDAIQRTEELEEAKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQNEVEDLMLDVERTN 1443
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREML------HQSQLGQLH 536
++F + L + + EE + +E + L L ++ L QL
Sbjct: 1444 AACAALDKKQRNFDKILAEWKQKYEETHAELEASQKEARSLGTELFKMKNAYEESLDQLE 1503
Query: 537 TSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXX 716
T + + QQ + DL + I +L+++ +Q E++ + + +
Sbjct: 1504 TLKRENKNLQQ-EISDLTEQIAEGGKRIHELEKIKKQVEQEKCELQAALE---------- 1552
Query: 717 XXXXXSWKHNQ----ELRKALQQLQGELQNK-SQQLHTLEAEKCNAIRIQEQHIQHLNHS 881
S +H + ++ L Q++ E+ K +++ ++ K N IR+ E L+
Sbjct: 1553 -EAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDEEIDQLKRNHIRVVESMQSTLDAE 1611
Query: 882 LSHKXXXXXXXXXXXXYRDNSDKTLD-ANEMLLEKLRQR------IQDRDVALERAIDXX 1040
+ + + + L+ +N M E LR ++D + L+ A+
Sbjct: 1612 IRSRNDAIRIKKKMEGDLNEMEIQLNHSNRMAAEALRNYRNTQGILKDTQLHLDDALRGQ 1671
Query: 1041 XXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATC 1220
R+ +L E +E LR L E + + E L V+ L
Sbjct: 1672 EDLKEQLAMVERRANLLQAE----IEELRATLEQTERSRKIAEQELLDASERVQLLHTQN 1727
Query: 1221 QNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEE 1400
+L ++++ET S Q E E I+Q+ + + K + D + +AEE
Sbjct: 1728 TSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAKKAITDAAM------------MAEE 1775
Query: 1401 LCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNS 1580
L +KE QD + + E ++ L + EQ + +K +Q L R
Sbjct: 1776 L-----KKE---QDTSAHLERMKKNMEQTVKDLQLRLDEAEQLALKGGKKQIQKLEARVR 1827
Query: 1581 ELQ 1589
EL+
Sbjct: 1828 ELE 1830
>ref|NP_032503.2| kinectin [Mus musculus].
Length = 1327
Score = 57.8 bits (138), Expect = 3e-08
Identities = 109/511 (21%), Positives = 208/511 (40%), Gaps = 41/511 (8%)
Frame = +3
Query: 174 MEVQPVTMTEELLKQQ--KLNSDETAITQQSVSDSHL----AELQEKIQQTEATNKILQE 335
++VQ + E LK Q + +S A T SV L AE ++++QTE + Q+
Sbjct: 572 IQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQD 631
Query: 336 KLNEMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQ 515
L EL +Q + + + E+ ++ + + K+R + Q
Sbjct: 632 HLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQ 691
Query: 516 SQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQ--LTDAKRCVRF 689
Q E S ++ L + AL Q E+QKLQ V Q+ + + ++C+
Sbjct: 692 LQ------HEVASKMEELKILSEQNKAL---QSEVQKLQTAVSQQPNKDVVEQMEKCI-- 740
Query: 690 VXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQE----Q 857
QE + L+ ++ L+ Q+ T E E+ +AIR + +
Sbjct: 741 -------------------QEKDEKLRTVEELLETGLIQVATRE-EELSAIRTENSTLTR 780
Query: 858 HIQHLNHSLSHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDV---ALERA 1028
+Q L S + D + + E LLE ++ +++ AL++
Sbjct: 781 EVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQE 840
Query: 1029 IDXXXXXXXXXXXXXRQLHLAVRERDHDL------ERLRGVLSSNEATIQSMESLLRAKG 1190
I+ ++ A E+ H L + L+ +L E + SM++ L +
Sbjct: 841 IEVLK----------EEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRD 890
Query: 1191 LEVE---QLSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRN----------K 1331
++ + C Q+ EE+E+ KE+++ I++++ L D K
Sbjct: 891 RDLRGRGTCAQVCSTPQF--EELESVL----KEKDNEIKRIEVKLKDTESDVSKMSELLK 944
Query: 1332 EVEDLSATLLCKLGPGQSEIA-----EELCQRLQRKERMLQDLLSDRN--KQAVEYEMEI 1490
EV++ + L C+L + + A EEL + KE+ + DL ++ K AVE++ +
Sbjct: 945 EVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKK 1004
Query: 1491 QGLLQSMSTREQESQAAAEKMVQALMERNSE 1583
L+ + E+ A+ EKM+Q + + S+
Sbjct: 1005 NNDLREKNWEAMEALASTEKMLQDRVNKTSK 1035
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 55,210,080
Number of extensions: 1355666
Number of successful extensions: 5636
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 5466
Number of HSP's successfully gapped: 49
Length of query: 626
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 519
Effective length of database: 12,403,707
Effective search space: 6437523933
Effective search space used: 6437523933
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009405
(1878 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001002812.1| myomegalin isoform 2 [Homo sapiens]. 865 0.0
Alignment gi|NP_055459.4| myomegalin isoform 1 [Homo sapiens]. 865 0.0
Alignment gi|NP_001185763.2| myomegalin isoform 9 [Homo sapiens]. 865 0.0
Alignment gi|NP_001185761.1| myomegalin isoform 8 [Homo sapiens]. 865 0.0
Alignment gi|NP_001002811.1| myomegalin isoform 5 [Homo sapiens]. 811 0.0
Alignment gi|NP_001166184.1| Golgin subfamily A member 4 isoform 1 [Homo ... 68 3e-11
Alignment gi|NP_002069.2| Golgin subfamily A member 4 isoform 2 [Homo sap... 68 3e-11
Alignment gi|NP_009117.2| centrosome-associated protein CEP250 [Homo sapi... 65 2e-10
Alignment gi|NP_005954.3| myosin-1 [Homo sapiens]. 64 5e-10
Alignment gi|NP_060003.2| myosin-4 [Homo sapiens]. 58 3e-08
>ref|NP_001002812.1| myomegalin isoform 2 [Homo sapiens].
Length = 969
Score = 865 bits (2234), Expect = 0.0
Identities = 475/625 (76%), Positives = 499/625 (79%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
EDVPGD V+P+QYTEALAQRDKRIEEL+QSLAA P MEV
Sbjct: 152 EDVPGDQVKPDQYTEALAQRDKRIEELNQSLAAQERLVEQLSREKQQLLHLLEEPTSMEV 211
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QP MTEELLKQQKLNS ET ITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS EL
Sbjct: 212 QP--MTEELLKQQKLNSHETTITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSYEL 269
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQ+ KETLKSRE ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 270 KCAQESSQKQDGTIQNLKETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 329
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQL DAK+CV+FV
Sbjct: 330 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHESEQQ 389
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQ ELQNKSQQL EAEK N IR QEQ+IQHLNHSLSHK
Sbjct: 390 KEASWKHNQELRKALQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHKEQL 449
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRDNSDKTL+ANEMLLEKLRQRI D+ VALERAID RQL
Sbjct: 450 LQEFRELLQYRDNSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKELRQL 509
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
LAVRERDHDLERLR VLSSNEAT+QSMESLLRAKGLEVEQLS TCQNLQWL+EEMETKF
Sbjct: 510 RLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEMETKF 569
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
S WQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD
Sbjct: 570 SRWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 629
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LLSDRNKQ +E+EMEIQGLLQS+STREQESQAAAEK+VQALMERNSELQALRQYLGG+D
Sbjct: 630 LLSDRNKQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQYLGGRDS 689
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
MSQA ISN+ AEVT + LG+QTDQG M IPSRDDSTSLTAK D SIPRS+ GDLDTV
Sbjct: 690 LMSQAPISNQQAEVTP-TGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTLGDLDTV 748
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +S+
Sbjct: 749 AGLEKELSNAKEELELMAKKERESQ 773
>ref|NP_055459.4| myomegalin isoform 1 [Homo sapiens].
Length = 2346
Score = 865 bits (2234), Expect = 0.0
Identities = 475/625 (76%), Positives = 499/625 (79%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
EDVPGD V+P+QYTEALAQRDKRIEEL+QSLAA P MEV
Sbjct: 152 EDVPGDQVKPDQYTEALAQRDKRIEELNQSLAAQERLVEQLSREKQQLLHLLEEPTSMEV 211
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QP MTEELLKQQKLNS ET ITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS EL
Sbjct: 212 QP--MTEELLKQQKLNSHETTITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSYEL 269
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQ+ KETLKSRE ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 270 KCAQESSQKQDGTIQNLKETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 329
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQL DAK+CV+FV
Sbjct: 330 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHESEQQ 389
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQ ELQNKSQQL EAEK N IR QEQ+IQHLNHSLSHK
Sbjct: 390 KEASWKHNQELRKALQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHKEQL 449
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRDNSDKTL+ANEMLLEKLRQRI D+ VALERAID RQL
Sbjct: 450 LQEFRELLQYRDNSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKELRQL 509
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
LAVRERDHDLERLR VLSSNEAT+QSMESLLRAKGLEVEQLS TCQNLQWL+EEMETKF
Sbjct: 510 RLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEMETKF 569
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
S WQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD
Sbjct: 570 SRWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 629
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LLSDRNKQ +E+EMEIQGLLQS+STREQESQAAAEK+VQALMERNSELQALRQYLGG+D
Sbjct: 630 LLSDRNKQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQYLGGRDS 689
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
MSQA ISN+ AEVT + LG+QTDQG M IPSRDDSTSLTAK D SIPRS+ GDLDTV
Sbjct: 690 LMSQAPISNQQAEVTP-TGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTLGDLDTV 748
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +S+
Sbjct: 749 AGLEKELSNAKEELELMAKKERESQ 773
>ref|NP_001185763.2| myomegalin isoform 9 [Homo sapiens].
Length = 2362
Score = 865 bits (2234), Expect = 0.0
Identities = 475/625 (76%), Positives = 499/625 (79%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
EDVPGD V+P+QYTEALAQRDKRIEEL+QSLAA P MEV
Sbjct: 152 EDVPGDQVKPDQYTEALAQRDKRIEELNQSLAAQERLVEQLSREKQQLLHLLEEPTSMEV 211
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QP MTEELLKQQKLNS ET ITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS EL
Sbjct: 212 QP--MTEELLKQQKLNSHETTITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSYEL 269
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQ+ KETLKSRE ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 270 KCAQESSQKQDGTIQNLKETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 329
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQL DAK+CV+FV
Sbjct: 330 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHESEQQ 389
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQ ELQNKSQQL EAEK N IR QEQ+IQHLNHSLSHK
Sbjct: 390 KEASWKHNQELRKALQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHKEQL 449
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRDNSDKTL+ANEMLLEKLRQRI D+ VALERAID RQL
Sbjct: 450 LQEFRELLQYRDNSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKELRQL 509
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
LAVRERDHDLERLR VLSSNEAT+QSMESLLRAKGLEVEQLS TCQNLQWL+EEMETKF
Sbjct: 510 RLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEMETKF 569
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
S WQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD
Sbjct: 570 SRWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 629
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LLSDRNKQ +E+EMEIQGLLQS+STREQESQAAAEK+VQALMERNSELQALRQYLGG+D
Sbjct: 630 LLSDRNKQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQYLGGRDS 689
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
MSQA ISN+ AEVT + LG+QTDQG M IPSRDDSTSLTAK D SIPRS+ GDLDTV
Sbjct: 690 LMSQAPISNQQAEVTP-TGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTLGDLDTV 748
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +S+
Sbjct: 749 AGLEKELSNAKEELELMAKKERESQ 773
>ref|NP_001185761.1| myomegalin isoform 8 [Homo sapiens].
Length = 2240
Score = 865 bits (2234), Expect = 0.0
Identities = 475/625 (76%), Positives = 499/625 (79%)
Frame = +3
Query: 3 EDVPGDLVRPNQYTEALAQRDKRIEELSQSLAAXXXXXXXXXXXXXXXXXXXXXPADMEV 182
EDVPGD V+P+QYTEALAQRDKRIEEL+QSLAA P MEV
Sbjct: 218 EDVPGDQVKPDQYTEALAQRDKRIEELNQSLAAQERLVEQLSREKQQLLHLLEEPTSMEV 277
Query: 183 QPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCEL 362
QP MTEELLKQQKLNS ET ITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS EL
Sbjct: 278 QP--MTEELLKQQKLNSHETTITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSYEL 335
Query: 363 XXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTS 542
TIQ+ KETLKSRE ETEELYQVIEGQN+TMAKLREMLHQSQLGQLH+S
Sbjct: 336 KCAQESSQKQDGTIQNLKETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSS 395
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQL DAK+CV+FV
Sbjct: 396 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHESEQQ 455
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXX 902
SWKHNQELRKALQQLQ ELQNKSQQL EAEK N IR QEQ+IQHLNHSLSHK
Sbjct: 456 KEASWKHNQELRKALQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHKEQL 515
Query: 903 XXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQL 1082
YRDNSDKTL+ANEMLLEKLRQRI D+ VALERAID RQL
Sbjct: 516 LQEFRELLQYRDNSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKELRQL 575
Query: 1083 HLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKF 1262
LAVRERDHDLERLR VLSSNEAT+QSMESLLRAKGLEVEQLS TCQNLQWL+EEMETKF
Sbjct: 576 RLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEMETKF 635
Query: 1263 SHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 1442
S WQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD
Sbjct: 636 SRWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQD 695
Query: 1443 LLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDF 1622
LLSDRNKQ +E+EMEIQGLLQS+STREQESQAAAEK+VQALMERNSELQALRQYLGG+D
Sbjct: 696 LLSDRNKQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQYLGGRDS 755
Query: 1623 TMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDLDTV 1802
MSQA ISN+ AEVT + LG+QTDQG M IPSRDDSTSLTAK D SIPRS+ GDLDTV
Sbjct: 756 LMSQAPISNQQAEVTP-TGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTLGDLDTV 814
Query: 1803 TGXXXXXXXXXXXXXXMAKKREKSR 1877
G MAKK +S+
Sbjct: 815 AGLEKELSNAKEELELMAKKERESQ 839
>ref|NP_001002811.1| myomegalin isoform 5 [Homo sapiens].
Length = 1132
Score = 811 bits (2094), Expect = 0.0
Identities = 443/568 (77%), Positives = 465/568 (81%)
Frame = +3
Query: 174 MEVQPVTMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS 353
+ VQP MTEELLKQQKLNS ET ITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS
Sbjct: 372 LRVQP--MTEELLKQQKLNSHETTITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMS 429
Query: 354 CELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQL 533
EL TIQ+ KETLKSRE ETEELYQVIEGQN+TMAKLREMLHQSQLGQL
Sbjct: 430 YELKCAQESSQKQDGTIQNLKETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQL 489
Query: 534 HTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXX 713
H+SEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQL DAK+CV+FV
Sbjct: 490 HSSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHES 549
Query: 714 XXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHK 893
SWKHNQELRKALQQLQ ELQNKSQQL EAEK N IR QEQ+IQHLNHSLSHK
Sbjct: 550 EQQKEASWKHNQELRKALQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHK 609
Query: 894 XXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXX 1073
YRDNSDKTL+ANEMLLEKLRQRI D+ VALERAID
Sbjct: 610 EQLLQEFRELLQYRDNSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKEL 669
Query: 1074 RQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEME 1253
RQL LAVRERDHDLERLR VLSSNEAT+QSMESLLRAKGLEVEQLS TCQNLQWL+EEME
Sbjct: 670 RQLRLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEME 729
Query: 1254 TKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERM 1433
TKFS WQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERM
Sbjct: 730 TKFSRWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERM 789
Query: 1434 LQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGG 1613
LQDLLSDRNKQ +E+EMEIQGLLQS+STREQESQAAAEK+VQALMERNSELQALRQYLGG
Sbjct: 790 LQDLLSDRNKQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQYLGG 849
Query: 1614 KDFTMSQALISNRPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASIPRSSXGDL 1793
+D MSQA ISN+ AEVT + LG+QTDQG M IPSRDDSTSLTAK D SIPRS+ GDL
Sbjct: 850 RDSLMSQAPISNQQAEVTP-TGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTLGDL 908
Query: 1794 DTVTGXXXXXXXXXXXXXXMAKKREKSR 1877
DTV G MAKK +S+
Sbjct: 909 DTVAGLEKELSNAKEELELMAKKERESQ 936
>ref|NP_001166184.1| Golgin subfamily A member 4 isoform 1 [Homo sapiens].
Length = 2243
Score = 68.2 bits (165), Expect = 3e-11
Identities = 99/509 (19%), Positives = 204/509 (40%), Gaps = 41/509 (8%)
Frame = +3
Query: 198 TEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQT-EATNKILQEKLNEMSCELXXXX 374
TEE ++ K DE T + S+ LQ+++ + + ++++ E +L
Sbjct: 448 TEEARRKLKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKLQKLH 507
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVI--EGQNETMAKLREMLHQSQLG--QLHTS 542
Q + L++RE E +E +V + Q+E + +E Q L +L
Sbjct: 508 EKELARKE--QELTKKLQTREREFQEQMKVALEKSQSEYLKISQEKEQQESLALEELELQ 565
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
+ + + L DLQ + I +L+ + E+ L + K + +
Sbjct: 566 KKAILTESENKLRDLQQEAETYRTRILELESSL---EKSLQENKNQSKDLAVHLEAEKN- 621
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQ-HIQHLNHSLSH--- 890
KHN+E+ +++ + EL++ Q L EK ++ Q Q ++ L
Sbjct: 622 -----KHNKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKE 676
Query: 891 ---KXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXX 1061
K + + + LD + LE L + + A + +
Sbjct: 677 TLLKDKEIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQT 736
Query: 1062 XXXXRQLHLAVRE-RDHDLERLRGVLSSNEATIQ-----------SMESLLRAKGLEVEQ 1205
++L + E ++H +++ ++ +E +IQ +E LL+ + +++
Sbjct: 737 DKMKQELEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKE 796
Query: 1206 LSATCQNLQWLREEMETKFSHWQKEQES----IIQQLQTSLHDRNKEVEDLSATLLCKLG 1373
A +NL E + K S + +Q S + Q Q++ H++ K E+ A L KL
Sbjct: 797 HQAHVENL-----EADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLAQLQQKLL 851
Query: 1374 PGQSE-------IAE------ELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMS 1514
++E +AE ++C L + +QDL+ KQ E E +++ L Q
Sbjct: 852 DLETERILLTKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKVKSLTQVYE 911
Query: 1515 TREQESQAAAEKMVQALMERNSELQALRQ 1601
++ ++ E+ Q L+E+ + + +R+
Sbjct: 912 SKLEDGNKEQEQTKQILVEKENMILQMRE 940
Score = 55.1 bits (131), Expect = 2e-07
Identities = 109/564 (19%), Positives = 224/564 (39%), Gaps = 44/564 (7%)
Frame = +3
Query: 192 TMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEAT-----NKILQEKLNEMSC 356
T E L QQ E + + + +L+EK +Q + T I Q + EM+
Sbjct: 636 TELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKETLLKDKEIIFQAHIEEMNE 695
Query: 357 ELXXXXXXXXXXXXTIQS-FKETLKSRESETEELYQVIEGQNETM-----AKLREML--H 512
+ ++ S E LK+R EEL V++ Q + M AK+ E H
Sbjct: 696 KTLEKLDVKQTELESLSSELSEVLKARHKLEEEL-SVLKDQTDKMKQELEAKMDEQKNHH 754
Query: 513 QSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFV 692
Q Q+ + S + + AL D +I +L+ +++++++ L + +
Sbjct: 755 QQQVDSIIKEHEVSIQRTEKALKD----------QINQLELLLKERDKHLKEHQA----- 799
Query: 693 XXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKC---NAIRIQEQHI 863
H + L +++ +GELQ S +L ++ + + E+ +
Sbjct: 800 ----------------HVENLEADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQL 843
Query: 864 QHLNHSL----SHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAI 1031
L L + + + + LDA+++ ++ L Q+++ ++ +E+ +
Sbjct: 844 AQLQQKLLDLETERILLTKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKV 903
Query: 1032 DXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEV--EQ 1205
+ + + + + E+ + +L E I M + K +E+ ++
Sbjct: 904 KSLT----------QVYESKLEDGNKEQEQTKQILVEKENMILQMREGQK-KEIEILTQK 952
Query: 1206 LSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATL-------LC 1364
LSA ++ L EE ETKF + +K+ E + Q+ + K++ D A L
Sbjct: 953 LSAKEDSIHILNEEYETKFKNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKKELENTAL 1012
Query: 1365 KLGPGQSEIAEELCQRLQRKERMLQDLLS---DRNKQAVEYEMEI--QGLLQSMSTREQE 1529
+L + + ++ + Q + D +S K+ +E E+ + L +S E++
Sbjct: 1013 ELSQKEKQFNAKMLEMAQANSAGISDAVSRLETNQKEQIESLTEVHRRELNDVISIWEKK 1072
Query: 1530 SQAAAEKMVQ----ALMERNSELQALRQYL---GGKDFTMSQAL--ISNRPAEVTSISPH 1682
AE++ + L E+ E+ L+Q + G + M++ + + + +
Sbjct: 1073 LNQQAEELQEIHEIQLQEKEQEVAELKQKILLFGCEKEEMNKEITWLKEEGVKQDTTLNE 1132
Query: 1683 LGEQTDQGLMHIPS-RDDSTSLTA 1751
L EQ Q H+ S D T L A
Sbjct: 1133 LQEQLKQKSAHVNSLAQDETKLKA 1156
>ref|NP_002069.2| Golgin subfamily A member 4 isoform 2 [Homo sapiens].
Length = 2230
Score = 68.2 bits (165), Expect = 3e-11
Identities = 99/509 (19%), Positives = 204/509 (40%), Gaps = 41/509 (8%)
Frame = +3
Query: 198 TEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQT-EATNKILQEKLNEMSCELXXXX 374
TEE ++ K DE T + S+ LQ+++ + + ++++ E +L
Sbjct: 426 TEEARRKLKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKLQKLH 485
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVI--EGQNETMAKLREMLHQSQLG--QLHTS 542
Q + L++RE E +E +V + Q+E + +E Q L +L
Sbjct: 486 EKELARKE--QELTKKLQTREREFQEQMKVALEKSQSEYLKISQEKEQQESLALEELELQ 543
Query: 543 EGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXX 722
+ + + L DLQ + I +L+ + E+ L + K + +
Sbjct: 544 KKAILTESENKLRDLQQEAETYRTRILELESSL---EKSLQENKNQSKDLAVHLEAEKN- 599
Query: 723 XXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQ-HIQHLNHSLSH--- 890
KHN+E+ +++ + EL++ Q L EK ++ Q Q ++ L
Sbjct: 600 -----KHNKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKE 654
Query: 891 ---KXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXX 1061
K + + + LD + LE L + + A + +
Sbjct: 655 TLLKDKEIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQT 714
Query: 1062 XXXXRQLHLAVRE-RDHDLERLRGVLSSNEATIQ-----------SMESLLRAKGLEVEQ 1205
++L + E ++H +++ ++ +E +IQ +E LL+ + +++
Sbjct: 715 DKMKQELEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKE 774
Query: 1206 LSATCQNLQWLREEMETKFSHWQKEQES----IIQQLQTSLHDRNKEVEDLSATLLCKLG 1373
A +NL E + K S + +Q S + Q Q++ H++ K E+ A L KL
Sbjct: 775 HQAHVENL-----EADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLAQLQQKLL 829
Query: 1374 PGQSE-------IAE------ELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMS 1514
++E +AE ++C L + +QDL+ KQ E E +++ L Q
Sbjct: 830 DLETERILLTKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKVKSLTQVYE 889
Query: 1515 TREQESQAAAEKMVQALMERNSELQALRQ 1601
++ ++ E+ Q L+E+ + + +R+
Sbjct: 890 SKLEDGNKEQEQTKQILVEKENMILQMRE 918
Score = 55.1 bits (131), Expect = 2e-07
Identities = 109/564 (19%), Positives = 224/564 (39%), Gaps = 44/564 (7%)
Frame = +3
Query: 192 TMTEELLKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEAT-----NKILQEKLNEMSC 356
T E L QQ E + + + +L+EK +Q + T I Q + EM+
Sbjct: 614 TELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKETLLKDKEIIFQAHIEEMNE 673
Query: 357 ELXXXXXXXXXXXXTIQS-FKETLKSRESETEELYQVIEGQNETM-----AKLREML--H 512
+ ++ S E LK+R EEL V++ Q + M AK+ E H
Sbjct: 674 KTLEKLDVKQTELESLSSELSEVLKARHKLEEEL-SVLKDQTDKMKQELEAKMDEQKNHH 732
Query: 513 QSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFV 692
Q Q+ + S + + AL D +I +L+ +++++++ L + +
Sbjct: 733 QQQVDSIIKEHEVSIQRTEKALKD----------QINQLELLLKERDKHLKEHQA----- 777
Query: 693 XXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKC---NAIRIQEQHI 863
H + L +++ +GELQ S +L ++ + + E+ +
Sbjct: 778 ----------------HVENLEADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQL 821
Query: 864 QHLNHSL----SHKXXXXXXXXXXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAI 1031
L L + + + + LDA+++ ++ L Q+++ ++ +E+ +
Sbjct: 822 AQLQQKLLDLETERILLTKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKV 881
Query: 1032 DXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEV--EQ 1205
+ + + + + E+ + +L E I M + K +E+ ++
Sbjct: 882 KSLT----------QVYESKLEDGNKEQEQTKQILVEKENMILQMREGQK-KEIEILTQK 930
Query: 1206 LSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATL-------LC 1364
LSA ++ L EE ETKF + +K+ E + Q+ + K++ D A L
Sbjct: 931 LSAKEDSIHILNEEYETKFKNQEKKMEKVKQKAKEMQETLKKKLLDQEAKLKKELENTAL 990
Query: 1365 KLGPGQSEIAEELCQRLQRKERMLQDLLS---DRNKQAVEYEMEI--QGLLQSMSTREQE 1529
+L + + ++ + Q + D +S K+ +E E+ + L +S E++
Sbjct: 991 ELSQKEKQFNAKMLEMAQANSAGISDAVSRLETNQKEQIESLTEVHRRELNDVISIWEKK 1050
Query: 1530 SQAAAEKMVQ----ALMERNSELQALRQYL---GGKDFTMSQAL--ISNRPAEVTSISPH 1682
AE++ + L E+ E+ L+Q + G + M++ + + + +
Sbjct: 1051 LNQQAEELQEIHEIQLQEKEQEVAELKQKILLFGCEKEEMNKEITWLKEEGVKQDTTLNE 1110
Query: 1683 LGEQTDQGLMHIPS-RDDSTSLTA 1751
L EQ Q H+ S D T L A
Sbjct: 1111 LQEQLKQKSAHVNSLAQDETKLKA 1134
>ref|NP_009117.2| centrosome-associated protein CEP250 [Homo sapiens].
Length = 2442
Score = 65.5 bits (158), Expect = 2e-10
Identities = 107/513 (20%), Positives = 202/513 (39%), Gaps = 35/513 (6%)
Frame = +3
Query: 168 ADMEVQPVTMTEELLKQQKLNSD------ETAITQQSVSDSHLAELQEKIQQTEATNKIL 329
A+++ ELL+ K N + A+ + S L+E ++ + K+
Sbjct: 1332 AELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLK 1391
Query: 330 QEKLN---EMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLR 500
E++ E + L +Q L +E EE + + GQ + + K R
Sbjct: 1392 NEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQR 1451
Query: 501 EM----LHQSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTD 668
EM L L ++ Q+Q+ L+ ++ ++ L V+++E++LT
Sbjct: 1452 EMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSV------LEHLPMAVQEREQKLTV 1505
Query: 669 AKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQQLHTLEAEKCNAIRI 848
+ +R + ++ + ++ +G++Q+ +QL TLE C A+ +
Sbjct: 1506 QREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLE---CLALEL 1562
Query: 849 QEQHIQHLNHSLSHKXXXXXXXXXXXXYRDNSDK------TLDANEMLLEKLRQRIQDRD 1010
+E H HK + + + TLD E E Q Q D
Sbjct: 1563 EENH---------HKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHD 1613
Query: 1011 V-----ALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMES- 1172
+ L R + +L DLER L + IQ +E
Sbjct: 1614 LESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQ 1673
Query: 1173 -LLRAKGLE--VEQLSATCQN----LQWLREEMETKFSHWQ---KEQESIIQQLQTSLHD 1322
+ K LE +EQ+ + + L R+ M+ + + K Q ++ ++ L D
Sbjct: 1674 RTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRD 1733
Query: 1323 RNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLL 1502
+ KEVE + +L + ++ ++L Q L RK LLS R ++ V + ++Q
Sbjct: 1734 KEKEVE-CQQEHIHELQELKDQLEQQL-QGLHRKVGETSLLLSQREQEIVVLQQQLQEAR 1791
Query: 1503 QSMSTREQESQAAAEKMVQALMERNSELQALRQ 1601
+ +EQ Q+ ++ +AL +R+ EL+AL+Q
Sbjct: 1792 EQGELKEQSLQSQLDEAQRALAQRDQELEALQQ 1824
Score = 57.8 bits (138), Expect = 3e-08
Identities = 111/473 (23%), Positives = 188/473 (39%), Gaps = 20/473 (4%)
Frame = +3
Query: 243 AITQQSVSDSHLAELQEKIQ---QTEATNKILQEKLNEMSCELXXXXXXXXXXXXTIQSF 413
A TQ+ ++H QE IQ Q + LQ+++ E+S L I++
Sbjct: 251 AKTQELEKEAH-ERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKAL 309
Query: 414 KETLKSRESETEEL--YQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQ--VALL 581
+ET++ E+ EL ++ +N KL + Q+ EG + AQ L
Sbjct: 310 RETVEILETNHTELMEHEASLSRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSL 369
Query: 582 DLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRK 761
+L S++F SQ + Q + + LT ++ V Q+LR+
Sbjct: 370 ELDSSIF-SQFDYQDADKALTLVRSVLTRRRQAV---------------------QDLRQ 407
Query: 762 ALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRDN 941
L Q E N QQ H E+ A+R + Q + +L+ + D+
Sbjct: 408 QLAGCQ-EAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEV------DS 460
Query: 942 SDKTLDANEMLLEKLRQRIQ--DRDVALERAIDXXXXXXXXXXXXXRQ-----LHLAVRE 1100
K + + E+LRQ+++ +++ R ++ ++ LHLAVRE
Sbjct: 461 LSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRE 520
Query: 1101 RDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKE 1280
R+ E L G+ + ++ + +L A LE L + LR+E +T+ +
Sbjct: 521 RERLQEMLMGLEAKQSESLSELITLREA--LESSHLEG-----ELLRQE-QTEVTAALAR 572
Query: 1281 QESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRN 1460
E I +L +S + EV DL A + KL +A + N
Sbjct: 573 AEQSIAELSSSENTLKTEVADLRAAAV-KLSALNEALALDKV---------------GLN 616
Query: 1461 KQAVEYEMEIQGLLQSMSTREQESQ------AAAEKMVQALMERNSELQALRQ 1601
+Q ++ E E Q + M EQ A AEK +AL E+N+ L+A Q
Sbjct: 617 QQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQ 669
>ref|NP_005954.3| myosin-1 [Homo sapiens].
Length = 1939
Score = 63.9 bits (154), Expect = 5e-10
Identities = 102/513 (19%), Positives = 209/513 (40%), Gaps = 2/513 (0%)
Frame = +3
Query: 225 LNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXTI 404
L S ET ++ + + +E++ +TEA K L+EK+ + E +
Sbjct: 844 LKSAETEKEMANMKEE-FEKTKEELAKTEAKRKELEEKMVTLMQE-------KNDLQLQV 895
Query: 405 QSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALLD 584
Q+ ++L E E Q+I+ + + AK++E+ +++ + +E T+ ++
Sbjct: 896 QAEADSLADAE---ERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRK------ 946
Query: 585 LQSALFCSQL--EIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELR 758
L+ CS+L +I L+ + + E++ + V+ + K + L+
Sbjct: 947 LEDE--CSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLTKEKKALQ 1004
Query: 759 KALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRD 938
+A QQ +LQ + +++TL K EQ + L SL + +
Sbjct: 1005 EAHQQTLDDLQAEEDKVNTLTKAKIKL----EQQVDDLEGSLEQEKKIRMDLERAKRKLE 1060
Query: 939 NSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLE 1118
K + M +E +Q++ ++ E + QL ++E +E
Sbjct: 1061 GDLKLAQESTMDIENDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIE 1120
Query: 1119 RLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESIIQ 1298
L + + A+ E E+E++S + K++E+ Q
Sbjct: 1121 ELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQ----IEMNKKREAEFQ 1176
Query: 1299 QLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEY 1478
+++ L + + E +ATL K +E+ E++ LQR ++ L+ K+ E
Sbjct: 1177 KMRRDLEEATLQHEATAATLRKKHADSVAELGEQI-DNLQRVKQKLE-------KEKSEM 1228
Query: 1479 EMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDFTMSQALISNRPA 1658
+MEI L +M T +++ EKM +AL ++ SE++ + Q LI++ A
Sbjct: 1229 KMEIDDLASNMET-VSKAKGNLEKMCRALEDQLSEIKTKEE--------EQQRLINDLTA 1279
Query: 1659 EVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKG 1757
+ + GE + Q + +D S ++G
Sbjct: 1280 QRARLQTESGEYSRQ----LDEKDTLVSQLSRG 1308
Score = 62.8 bits (151), Expect = 1e-09
Identities = 91/466 (19%), Positives = 180/466 (38%), Gaps = 7/466 (1%)
Frame = +3
Query: 210 LKQQKLNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXX 389
L++ L + TA T + +AEL E+I + + L+++ +EM E+
Sbjct: 1182 LEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDD------- 1234
Query: 390 XXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQ 569
+ S ET+ + E++ + +E QL ++ T E +QQ
Sbjct: 1235 ----LASNMETVSKAKGNLEKMCRALE---------------DQLSEIKTKE----EEQQ 1271
Query: 570 VALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQ 749
+ DL + Q E + R + +K+ ++ R Q
Sbjct: 1272 RLINDLTAQRARLQTESGEYSRQLDEKDTLVSQLSR-----------------GKQAFTQ 1314
Query: 750 ELRKALQQLQGELQNKSQQLHTLEAEK--CNAIRIQEQHIQHLNHSLSH--KXXXXXXXX 917
++ + +QL+ E++ KS H L++ + C+ +R Q + Q L
Sbjct: 1315 QIEELKRQLEEEIKAKSALAHALQSSRHDCDLLREQYEEEQEAKAELQRAMSKANSEVAQ 1374
Query: 918 XXXXYRDNSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVR 1097
Y ++ + + E +KL QR+QD
Sbjct: 1375 WRTKYETDAIQRTEELEEAKKKLAQRLQD------------------------------- 1403
Query: 1098 ERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQK 1277
+ +E + +S E T Q +++ + ++VE+ +A C L + + + W++
Sbjct: 1404 -AEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTNAACAALDKKQRNFDKILAEWKQ 1462
Query: 1278 EQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDR 1457
+ E +L+ S KE LS T L K+ E ++L + L+R+ + LQ +SD
Sbjct: 1463 KCEETHAELEAS----QKESRSLS-TELFKIKNAYEESLDQL-ETLKRENKNLQQEISDL 1516
Query: 1458 NKQAVEYEM---EIQGLLQSMSTREQESQAAAEKMVQALMERNSEL 1586
+Q E E++ + + + + E QAA E+ +L ++
Sbjct: 1517 TEQIAEGGKRIHELEKIKKQVEQEKSELQAALEEAEASLEHEEGKI 1562
Score = 58.2 bits (139), Expect = 3e-08
Identities = 93/483 (19%), Positives = 187/483 (38%), Gaps = 19/483 (3%)
Frame = +3
Query: 198 TEELLKQQKLNSDETAITQQ-SVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXX 374
T+ + + ++L + + Q+ ++ H+ + K E T + LQ ++ ++ ++
Sbjct: 1381 TDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTN 1440
Query: 375 XXXXXXXXTIQSFKETLKSRESETEELYQVIEGQNETMAKLREML------HQSQLGQLH 536
++F + L + + EE + +E + L L ++ L QL
Sbjct: 1441 AACAALDKKQRNFDKILAEWKQKCEETHAELEASQKESRSLSTELFKIKNAYEESLDQLE 1500
Query: 537 TSEGTSPAQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXX 716
T + + QQ + DL + I +L+++ +Q E++ ++ + +
Sbjct: 1501 TLKRENKNLQQ-EISDLTEQIAEGGKRIHELEKIKKQVEQEKSELQAALE---------- 1549
Query: 717 XXXXXSWKHNQ----ELRKALQQLQGELQNK-SQQLHTLEAEKCNAIRIQEQHIQHLNHS 881
S +H + ++ L Q++ E+ K +++ ++ K N IRI E L+
Sbjct: 1550 -EAEASLEHEEGKILRIQLELNQVKSEVDRKIAEKDEEIDQMKRNHIRIVESMQSTLDAE 1608
Query: 882 LSHKXXXXXXXXXXXXYRDNSDKTLD-ANEMLLEKLRQR------IQDRDVALERAIDXX 1040
+ + + + L+ AN M E LR ++D + L+ A+
Sbjct: 1609 IRSRNDAIRLKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQAILKDTQLHLDDALRSQ 1668
Query: 1041 XXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEATIQSMESLLRAKGLEVEQLSATC 1220
R+ +L E +E LR L E + + E L V+ L
Sbjct: 1669 EDLKEQLAMVERRANLLQAE----IEELRATLEQTERSRKIAEQELLDASERVQLLHTQN 1724
Query: 1221 QNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEE 1400
+L ++++ET S Q E E IIQ+ + + K + D + +AEE
Sbjct: 1725 TSLINTKKKLETDISQIQGEMEDIIQEARNAEEKAKKAITDAAM------------MAEE 1772
Query: 1401 LCQRLQRKERMLQDLLSDRNKQAVEYEMEIQGLLQSMSTREQESQAAAEKMVQALMERNS 1580
L +KE QD + + E ++ L + EQ + +K +Q L R
Sbjct: 1773 L-----KKE---QDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVR 1824
Query: 1581 ELQ 1589
EL+
Sbjct: 1825 ELE 1827
>ref|NP_060003.2| myosin-4 [Homo sapiens].
Length = 1939
Score = 57.8 bits (138), Expect = 3e-08
Identities = 101/513 (19%), Positives = 205/513 (39%), Gaps = 2/513 (0%)
Frame = +3
Query: 225 LNSDETAITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXTI 404
L S ET ++ + + +E++ +TEA K L+EK+ + E +
Sbjct: 844 LKSAETEKEMANMKEE-FEKTKEELAKTEAKRKELEEKMVTLMQE-------KNDLQLQV 895
Query: 405 QSFKETLKSRESETEELYQVIEGQNETMAKLREMLHQSQLGQLHTSEGTSPAQQQVALLD 584
Q+ + L E E Q+I+ + + AK++E+ +++ + +E T+ ++
Sbjct: 896 QAEADALADAE---ERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRK------ 946
Query: 585 LQSALFCSQL--EIQKLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELR 758
L+ CS+L +I L+ + + E++ + V+ + K + L+
Sbjct: 947 LEDE--CSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLTKEKKALQ 1004
Query: 759 KALQQLQGELQNKSQQLHTLEAEKCNAIRIQEQHIQHLNHSLSHKXXXXXXXXXXXXYRD 938
+A QQ +LQ + +++TL K EQ + L SL + +
Sbjct: 1005 EAHQQTLDDLQMEEDKVNTLTKAKTKL----EQQVDDLEGSLEQEKKLCMDLERAKRKLE 1060
Query: 939 NSDKTLDANEMLLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLE 1118
K + M E +Q++ ++ E + QL ++E +E
Sbjct: 1061 GDLKLAQESTMDTENDKQQLNEKLKKKEFEMSNLQGKIEDEQALAIQLQKKIKELQARIE 1120
Query: 1119 RLRGVLSSNEATIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESIIQ 1298
L + + A+ E E+E++S + K++E+ Q
Sbjct: 1121 ELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQ----IEMNKKREAEFQ 1176
Query: 1299 QLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAVEY 1478
+++ L + + E +A L K +E+ E++ LQR ++ L+ K+ E
Sbjct: 1177 KMRRDLEESTLQHEATAAALRKKHADSVAELGEQI-DSLQRVKQKLE-------KEKSEL 1228
Query: 1479 EMEIQGLLQSMSTREQESQAAAEKMVQALMERNSELQALRQYLGGKDFTMSQALISNRPA 1658
+MEI L +M T +++A EKM + L ++ SE++ + Q LI+ A
Sbjct: 1229 KMEINDLASNMET-VSKAKANFEKMCRTLEDQLSEIKTKEE--------EQQRLINELSA 1279
Query: 1659 EVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKG 1757
+ + GE + Q + +D S ++G
Sbjct: 1280 QKARLHTESGEFSRQ----LDEKDAMVSQLSRG 1308
Score = 56.6 bits (135), Expect = 8e-08
Identities = 103/520 (19%), Positives = 199/520 (38%), Gaps = 24/520 (4%)
Frame = +3
Query: 282 ELQEKIQQTEATNKILQEKLNEMSCELXXXXXXXXXXXXTIQSFKETLKSRESETEELYQ 461
+L+E Q EAT L++K + EL ++Q K+ L+ +SE +
Sbjct: 1181 DLEESTLQHEATAAALRKKHADSVAELGEQID-------SLQRVKQKLEKEKSELKMEIN 1233
Query: 462 VIEGQNETMAKLREMLH------QSQLGQLHTSEGTSPAQQQVALLDLQSALFCSQLEIQ 623
+ ET++K + + QL ++ T E +QQ + +L + E
Sbjct: 1234 DLASNMETVSKAKANFEKMCRTLEDQLSEIKTKE----EEQQRLINELSAQKARLHTESG 1289
Query: 624 KLQRVVRQKERQLTDAKRCVRFVXXXXXXXXXXXXXSWKHNQELRKALQQLQGELQNKSQ 803
+ R + +K+ ++ R Q++ + +QL+ E + KS
Sbjct: 1290 EFSRQLDEKDAMVSQLSR-----------------GKQAFTQQIEELKRQLEEETKAKST 1332
Query: 804 QLHTLEAEK--CNAIRIQEQHIQHLNHSLSH--KXXXXXXXXXXXXYRDNSDKTLDANEM 971
H L++ + C+ +R Q + Q L Y ++ + + E
Sbjct: 1333 LAHALQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEE 1392
Query: 972 LLEKLRQRIQDRDVALERAIDXXXXXXXXXXXXXRQLHLAVRERDHDLERLRGVLSSNEA 1151
+KL QR+QD + +E + +S E
Sbjct: 1393 AKKKLAQRLQD--------------------------------AEEHVEAVNSKCASLEK 1420
Query: 1152 TIQSMESLLRAKGLEVEQLSATCQNLQWLREEMETKFSHWQKEQESIIQQLQTSLHDRNK 1331
T Q +++ + ++VE+ +A C L + + + W+++ E + Q L K
Sbjct: 1421 TKQRLQNEVEDLMIDVERSNAACIALDKKQRNFDKVLAEWKQKYE----ETQAELEASQK 1476
Query: 1332 EVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQAVE-----YEME--- 1487
E LS T L K+ E + L + L+R+ + LQ +SD +Q E +E+E
Sbjct: 1477 ESRSLS-TELFKVKNAYEESLDHL-ETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVK 1534
Query: 1488 --IQGLLQSMSTREQESQAAAE----KMVQALMERNSELQALRQYLGGKDFTMSQALISN 1649
+ + T +E++A+ E K+++ +E N + + + KD + Q L N
Sbjct: 1535 KQLDHEKSELQTSLEEAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDEELDQ-LKRN 1593
Query: 1650 RPAEVTSISPHLGEQTDQGLMHIPSRDDSTSLTAKGDASI 1769
V S+ L + I SR+D+ + K + +
Sbjct: 1594 HLRVVESMQSTLDAE-------IRSRNDALRIKKKMEGDL 1626
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 64,869,259
Number of extensions: 1603525
Number of successful extensions: 6592
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 6366
Number of HSP's successfully gapped: 49
Length of query: 626
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 517
Effective length of database: 14,704,088
Effective search space: 7602013496
Effective search space used: 7602013496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009405
(1878 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr04 424 e-116
gb|GL893398.2| Sus scrofa unplaced genomic scaffold ChrUScaf1283 392 e-106
>Sscrofa_Chr04
|| Length = 143465943
Score = 424 bits (214), Expect = e-116
Identities = 214/214 (100%)
Strand = Plus / Minus
Query: 537 acctctgagggtacttccccagctcagcaacaggtggctctgcttgatcttcagagtgct 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110487570 acctctgagggtacttccccagctcagcaacaggtggctctgcttgatcttcagagtgct 110487511
Query: 597 ttattctgcagccagcttgagatccagaagcttcagagggtggtacgacaaaaagaacgg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110487510 ttattctgcagccagcttgagatccagaagcttcagagggtggtacgacaaaaagaacgg 110487451
Query: 657 cagctgactgatgccaaacgctgtgtgagatttgtagaggcggcggcagaggagagagag 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110487450 cagctgactgatgccaaacgctgtgtgagatttgtagaggcggcggcagaggagagagag 110487391
Query: 717 cagcagaaagaggcttcttggaaacataaccagg 750
||||||||||||||||||||||||||||||||||
Sbjct: 110487390 cagcagaaagaggcttcttggaaacataaccagg 110487357
Score = 392 bits (198), Expect = e-106
Identities = 198/198 (100%)
Strand = Plus / Minus
Query: 1339 aggatcttagtgcaacgttgctctgcaaactcggaccagggcagagtgagatagctgagg 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110482797 aggatcttagtgcaacgttgctctgcaaactcggaccagggcagagtgagatagctgagg 110482738
Query: 1399 agctgtgccagcgtctacagcgaaaggagaggatgctgcaggaccttctaagcgatcgaa 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110482737 agctgtgccagcgtctacagcgaaaggagaggatgctgcaggaccttctaagcgatcgaa 110482678
Query: 1459 acaaacaagcagtggaatatgaaatggagattcagggcctgcttcagtccatgagcacca 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110482677 acaaacaagcagtggaatatgaaatggagattcagggcctgcttcagtccatgagcacca 110482618
Query: 1519 gggagcaggagagccaag 1536
||||||||||||||||||
Sbjct: 110482617 gggagcaggagagccaag 110482600
Score = 363 bits (183), Expect = 2e-97
Identities = 183/183 (100%)
Strand = Plus / Minus
Query: 1159 agagtatggagagtctcctgagggccaaaggcctggaagtggaacagttatctgctacct 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110484093 agagtatggagagtctcctgagggccaaaggcctggaagtggaacagttatctgctacct 110484034
Query: 1219 gtcagaacctccaatggctgagagaagaaatggaaaccaaatttagccattggcaaaagg 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110484033 gtcagaacctccaatggctgagagaagaaatggaaaccaaatttagccattggcaaaagg 110483974
Query: 1279 agcaagaaagtatcattcagcagttgcagacatctctgcatgacaggaacaaagaagtgg 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110483973 agcaagaaagtatcattcagcagttgcagacatctctgcatgacaggaacaaagaagtgg 110483914
Query: 1339 agg 1341
|||
Sbjct: 110483913 agg 110483911
Score = 335 bits (169), Expect = 5e-89
Identities = 169/169 (100%)
Strand = Plus / Minus
Query: 1536 gctgctgcagaaaagatggtacaagccctaatggaaagaaattcagaattacaggccctg 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110479206 gctgctgcagaaaagatggtacaagccctaatggaaagaaattcagaattacaggccctg 110479147
Query: 1596 cgccagtatctgggagggaaagatttcacaatgtcccaagcactcatctctaaccgacca 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110479146 cgccagtatctgggagggaaagatttcacaatgtcccaagcactcatctctaaccgacca 110479087
Query: 1656 gccgaagttacctccatcagcccccatcttggagagcagactgatcaag 1704
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110479086 gccgaagttacctccatcagcccccatcttggagagcagactgatcaag 110479038
Score = 323 bits (163), Expect = 2e-85
Identities = 163/163 (100%)
Strand = Plus / Minus
Query: 747 caggaattgcgaaaagccttgcagcagctacagggagaattgcagaataagagccaacag 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110486484 caggaattgcgaaaagccttgcagcagctacagggagaattgcagaataagagccaacag 110486425
Query: 807 cttcatactctagaggctgaaaaatgcaatgcgattagaatccaagagcaacacattcag 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110486424 cttcatactctagaggctgaaaaatgcaatgcgattagaatccaagagcaacacattcag 110486365
Query: 867 cacctcaaccacagtctgagtcacaaagagcagctgcttcagg 909
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110486364 cacctcaaccacagtctgagtcacaaagagcagctgcttcagg 110486322
Score = 278 bits (140), Expect = 1e-71
Identities = 140/140 (100%)
Strand = Plus / Minus
Query: 184 agcctgtgaccatgactgaagagttactcaaacaacaaaagctgaattcagatgagactg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110488994 agcctgtgaccatgactgaagagttactcaaacaacaaaagctgaattcagatgagactg 110488935
Query: 244 ctataactcagcagtctgtatctgattcccatttggcagaactccaggaaaaaatccagc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110488934 ctataactcagcagtctgtatctgattcccatttggcagaactccaggaaaaaatccagc 110488875
Query: 304 aaactgaggccaccaacaag 323
||||||||||||||||||||
Sbjct: 110488874 aaactgaggccaccaacaag 110488855
Score = 270 bits (136), Expect = 3e-69
Identities = 139/140 (99%)
Strand = Plus / Minus
Query: 1021 agcgggctatagacgagaagttctccagtctagaagaaaaagaaaaggaactgcgccaac 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 110484905 agcgggctatagacgagaagttctccagtctagaagaaaaagaaaaggaactacgccaac 110484846
Query: 1081 ttcaccttgctgtgagggagcgagatcatgacttagagagactgcgaggtgttctctcct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110484845 ttcaccttgctgtgagggagcgagatcatgacttagagagactgcgaggtgttctctcct 110484786
Query: 1141 ctaatgaagctactatccag 1160
||||||||||||||||||||
Sbjct: 110484785 ctaatgaagctactatccag 110484766
Score = 242 bits (122), Expect = 6e-61
Identities = 122/122 (100%)
Strand = Plus / Minus
Query: 322 agattcttcaagaaaaactgaatgaaatgagctgtgaactaaagtctgctcagcagtcat 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110488137 agattcttcaagaaaaactgaatgaaatgagctgtgaactaaagtctgctcagcagtcat 110488078
Query: 382 ctcagaagcaagatagtacaattcaaagcttcaaggaaactctgaaaagcagggaaagcg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110488077 ctcagaagcaagatagtacaattcaaagcttcaaggaaactctgaaaagcagggaaagcg 110488018
Query: 442 ag 443
||
Sbjct: 110488017 ag 110488016
Score = 234 bits (118), Expect = 1e-58
Identities = 118/118 (100%)
Strand = Plus / Minus
Query: 68 aagaattgaagaactgagtcagagcctggctgcccaggagaagcttgtagaacagctatc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110518374 aagaattgaagaactgagtcagagcctggctgcccaggagaagcttgtagaacagctatc 110518315
Query: 128 tcaagagaaacagcaactacaacatctgttagaggagccagctgacatggaagtgcag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110518314 tcaagagaaacagcaactacaacatctgttagaggagccagctgacatggaagtgcag 110518257
Score = 230 bits (116), Expect = 2e-57
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 907 aggaatttcgggaactcctgcagtaccgagataactcggacaaaacccttgatgcgaatg 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110485208 aggaatttcgggaactcctgcagtaccgagataactcggacaaaacccttgatgcgaatg 110485149
Query: 967 aaatgttgcttgagaaacttcggcaaagaatccaagatagagatgttgctctagag 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110485148 aaatgttgcttgagaaacttcggcaaagaatccaagatagagatgttgctctagag 110485093
Score = 188 bits (95), Expect = 8e-45
Identities = 95/95 (100%)
Strand = Plus / Minus
Query: 442 agactgaggagttgtaccaggtgattgaaggtcaaaacgaaacaatggcaaagcttcgag 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110487790 agactgaggagttgtaccaggtgattgaaggtcaaaacgaaacaatggcaaagcttcgag 110487731
Query: 502 aaatgctgcaccagagccagcttggacaactgcat 536
|||||||||||||||||||||||||||||||||||
Sbjct: 110487730 aaatgctgcaccagagccagcttggacaactgcat 110487696
Score = 159 bits (80), Expect = 7e-36
Identities = 82/83 (98%)
Strand = Plus / Minus
Query: 1704 ggtttgatgcatataccctccagagatgatagcacttcattgactgccaaaggggatgcc 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110478868 ggtttgatgcatataccctccagagatgatagcacttcattgactgccaaaggggatgcc 110478809
Query: 1764 agcatacccaggtcctcangagg 1786
|||||||||||||||||| ||||
Sbjct: 110478808 agcatacccaggtcctcaggagg 110478786
Score = 145 bits (73), Expect = 1e-31
Identities = 86/89 (96%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 1784 aggagacttggatacagtcacagggctagaaaagaaactgagcagtgccaaagaggaact 1843
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 110474269 aggagacttggatacagtcacagggctagaaaaagaactgagcagtgccaaagaggaact 110474210
Query: 1844 tgagctcatggcta-aaaagagagagaaa 1871
|||||||||||||| ||||||||||||||
Sbjct: 110474209 tgagctcatggctaaaaaagagagagaaa 110474181
Score = 133 bits (67), Expect = 4e-28
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 1 gagaagatgtgccaggagacctggtcaggcccaaccagtacactgaggccctggcgcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110522119 gagaagatgtgccaggagacctggtcaggcccaaccagtacactgaggccctggcgcaga 110522060
Query: 61 gggacaa 67
|||||||
Sbjct: 110522059 gggacaa 110522053
>gb|GL893398.2| Sus scrofa unplaced genomic scaffold ChrUScaf1283
Length = 83789
Score = 392 bits (198), Expect = e-106
Identities = 198/198 (100%)
Strand = Plus / Minus
Query: 1339 aggatcttagtgcaacgttgctctgcaaactcggaccagggcagagtgagatagctgagg 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33515 aggatcttagtgcaacgttgctctgcaaactcggaccagggcagagtgagatagctgagg 33456
Query: 1399 agctgtgccagcgtctacagcgaaaggagaggatgctgcaggaccttctaagcgatcgaa 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33455 agctgtgccagcgtctacagcgaaaggagaggatgctgcaggaccttctaagcgatcgaa 33396
Query: 1459 acaaacaagcagtggaatatgaaatggagattcagggcctgcttcagtccatgagcacca 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33395 acaaacaagcagtggaatatgaaatggagattcagggcctgcttcagtccatgagcacca 33336
Query: 1519 gggagcaggagagccaag 1536
||||||||||||||||||
Sbjct: 33335 gggagcaggagagccaag 33318
Score = 363 bits (183), Expect = 2e-97
Identities = 183/183 (100%)
Strand = Plus / Minus
Query: 1159 agagtatggagagtctcctgagggccaaaggcctggaagtggaacagttatctgctacct 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34712 agagtatggagagtctcctgagggccaaaggcctggaagtggaacagttatctgctacct 34653
Query: 1219 gtcagaacctccaatggctgagagaagaaatggaaaccaaatttagccattggcaaaagg 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34652 gtcagaacctccaatggctgagagaagaaatggaaaccaaatttagccattggcaaaagg 34593
Query: 1279 agcaagaaagtatcattcagcagttgcagacatctctgcatgacaggaacaaagaagtgg 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34592 agcaagaaagtatcattcagcagttgcagacatctctgcatgacaggaacaaagaagtgg 34533
Query: 1339 agg 1341
|||
Sbjct: 34532 agg 34530
Score = 335 bits (169), Expect = 5e-89
Identities = 169/169 (100%)
Strand = Plus / Minus
Query: 1536 gctgctgcagaaaagatggtacaagccctaatggaaagaaattcagaattacaggccctg 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30373 gctgctgcagaaaagatggtacaagccctaatggaaagaaattcagaattacaggccctg 30314
Query: 1596 cgccagtatctgggagggaaagatttcacaatgtcccaagcactcatctctaaccgacca 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30313 cgccagtatctgggagggaaagatttcacaatgtcccaagcactcatctctaaccgacca 30254
Query: 1656 gccgaagttacctccatcagcccccatcttggagagcagactgatcaag 1704
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30253 gccgaagttacctccatcagcccccatcttggagagcagactgatcaag 30205
Score = 323 bits (163), Expect = 2e-85
Identities = 163/163 (100%)
Strand = Plus / Minus
Query: 747 caggaattgcgaaaagccttgcagcagctacagggagaattgcagaataagagccaacag 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37068 caggaattgcgaaaagccttgcagcagctacagggagaattgcagaataagagccaacag 37009
Query: 807 cttcatactctagaggctgaaaaatgcaatgcgattagaatccaagagcaacacattcag 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37008 cttcatactctagaggctgaaaaatgcaatgcgattagaatccaagagcaacacattcag 36949
Query: 867 cacctcaaccacagtctgagtcacaaagagcagctgcttcagg 909
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36948 cacctcaaccacagtctgagtcacaaagagcagctgcttcagg 36906
Score = 270 bits (136), Expect = 3e-69
Identities = 139/140 (99%)
Strand = Plus / Minus
Query: 1021 agcgggctatagacgagaagttctccagtctagaagaaaaagaaaaggaactgcgccaac 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 35524 agcgggctatagacgagaagttctccagtctagaagaaaaagaaaaggaactacgccaac 35465
Query: 1081 ttcaccttgctgtgagggagcgagatcatgacttagagagactgcgaggtgttctctcct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35464 ttcaccttgctgtgagggagcgagatcatgacttagagagactgcgaggtgttctctcct 35405
Query: 1141 ctaatgaagctactatccag 1160
||||||||||||||||||||
Sbjct: 35404 ctaatgaagctactatccag 35385
Score = 234 bits (118), Expect = 1e-58
Identities = 118/118 (100%)
Strand = Plus / Minus
Query: 68 aagaattgaagaactgagtcagagcctggctgcccaggagaagcttgtagaacagctatc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64082 aagaattgaagaactgagtcagagcctggctgcccaggagaagcttgtagaacagctatc 64023
Query: 128 tcaagagaaacagcaactacaacatctgttagaggagccagctgacatggaagtgcag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64022 tcaagagaaacagcaactacaacatctgttagaggagccagctgacatggaagtgcag 63965
Score = 230 bits (116), Expect = 2e-57
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 907 aggaatttcgggaactcctgcagtaccgagataactcggacaaaacccttgatgcgaatg 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35827 aggaatttcgggaactcctgcagtaccgagataactcggacaaaacccttgatgcgaatg 35768
Query: 967 aaatgttgcttgagaaacttcggcaaagaatccaagatagagatgttgctctagag 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35767 aaatgttgcttgagaaacttcggcaaagaatccaagatagagatgttgctctagag 35712
Score = 159 bits (80), Expect = 7e-36
Identities = 82/83 (98%)
Strand = Plus / Minus
Query: 1704 ggtttgatgcatataccctccagagatgatagcacttcattgactgccaaaggggatgcc 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30035 ggtttgatgcatataccctccagagatgatagcacttcattgactgccaaaggggatgcc 29976
Query: 1764 agcatacccaggtcctcangagg 1786
|||||||||||||||||| ||||
Sbjct: 29975 agcatacccaggtcctcaggagg 29953
Score = 145 bits (73), Expect = 1e-31
Identities = 86/89 (96%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 1784 aggagacttggatacagtcacagggctagaaaagaaactgagcagtgccaaagaggaact 1843
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 25904 aggagacttggatacagtcacagggctagaaaaagaactgagcagtgccaaagaggaact 25845
Query: 1844 tgagctcatggcta-aaaagagagagaaa 1871
|||||||||||||| ||||||||||||||
Sbjct: 25844 tgagctcatggctaaaaaagagagagaaa 25816
Score = 133 bits (67), Expect = 4e-28
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 1 gagaagatgtgccaggagacctggtcaggcccaaccagtacactgaggccctggcgcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67889 gagaagatgtgccaggagacctggtcaggcccaaccagtacactgaggccctggcgcaga 67830
Query: 61 gggacaa 67
|||||||
Sbjct: 67829 gggacaa 67823
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 64,765,219
Number of extensions: 712
Number of successful extensions: 712
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 712
Number of HSP's successfully gapped: 24
Length of query: 1878
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1856
Effective length of database: 2,808,408,574
Effective search space: 5212406313344
Effective search space used: 5212406313344
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)