Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009445
(1050 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001015603.1| STE20-related kinase adapter protein alpha [... 524 e-155
Alignment gi|NP_001179010.2| STE20-related kinase adapter protein beta [B... 267 1e-71
Alignment gi|XP_002685535.1| PREDICTED: STE20-related kinase adaptor beta... 267 1e-71
Alignment gi|NP_001069360.2| serine/threonine-protein kinase OSR1 [Bos ta... 136 4e-32
Alignment gi|XP_002696990.1| PREDICTED: oxidative-stress responsive 1 [Bo... 136 4e-32
Alignment gi|XP_001787530.1| PREDICTED: oxidative-stress responsive 1 [Bo... 136 4e-32
Alignment gi|NP_001093420.1| serine/threonine-protein kinase 24 [Bos taur... 105 9e-23
Alignment gi|NP_001015602.1| serine/threonine-protein kinase 4 [Bos tauru... 102 7e-22
Alignment gi|NP_899666.1| serine/threonine-protein kinase 25 [Bos taurus]. 101 1e-21
Alignment gi|NP_001157258.1| serine/threonine-protein kinase MST4 [Bos ta... 100 2e-21
>ref|NP_001015603.1| STE20-related kinase adapter protein alpha [Bos taurus].
Length = 373
Score = 524 bits (1349), Expect(2) = e-155
Identities = 260/267 (97%), Positives = 261/267 (97%)
Frame = +3
Query: 186 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 365
MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE
Sbjct: 1 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 60
Query: 366 LHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 545
LHVSKLFSHPNILPY ATFIADNELWVVTSFMAYGSAKDLICTHFMDGM+ELAIAYILQG
Sbjct: 61 LHVSKLFSHPNILPYGATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQG 120
Query: 546 VLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSI 725
LKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSI
Sbjct: 121 ALKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSI 180
Query: 726 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 905
KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC
Sbjct: 181 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 240
Query: 906 LLDTSTIPAEELTMGAPRSAANPGLSE 986
LLDTSTIPAEELTM RSAAN GLSE
Sbjct: 241 LLDTSTIPAEELTMSTSRSAANSGLSE 267
Score = 45.1 bits (105), Expect(2) = e-155
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPSHPYHR 1048
SL STPRTSNGDSPSHPYHR
Sbjct: 268 SLAPSTPRTSNGDSPSHPYHR 288
>ref|NP_001179010.2| STE20-related kinase adapter protein beta [Bos taurus].
Length = 418
Score = 267 bits (683), Expect = 1e-71
Identities = 135/257 (52%), Positives = 175/257 (68%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL IG+GF++L +V+LAR+ PTG VT++ NLE C+ E + LQ + +S F HP
Sbjct: 58 YELQVEIGRGFDNLTSVHLARHTPTGTLVTIKITNLENCTEERLKALQKAVILSHFFRHP 117
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
NI Y F + LWV++ FMAYGSA L+ T+F +GM+E I IL G ++ L+Y+H
Sbjct: 118 NITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPEGMSETLIRNILFGAVRGLNYLHQ 177
Query: 576 MGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEV 755
G +HRS+KASH+LIS DG V LSGL S++ HGQR R V+DFP++S V PWLSPE+
Sbjct: 178 NGCIHRSIKASHILISGDGLVTLSGLFHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSPEL 237
Query: 756 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 935
L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQMLL+KL G LD S P
Sbjct: 238 LRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLKGPPYSPLDASIFPQS 297
Query: 936 ELTMGAPRSAANPGLSE 986
E M RS + G+ E
Sbjct: 298 ESRMKNSRSGVDSGIGE 314
>ref|XP_002685535.1| PREDICTED: STE20-related kinase adaptor beta [Bos taurus].
Length = 432
Score = 267 bits (683), Expect = 1e-71
Identities = 135/257 (52%), Positives = 175/257 (68%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL IG+GF++L +V+LAR+ PTG VT++ NLE C+ E + LQ + +S F HP
Sbjct: 72 YELQVEIGRGFDNLTSVHLARHTPTGTLVTIKITNLENCTEERLKALQKAVILSHFFRHP 131
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
NI Y F + LWV++ FMAYGSA L+ T+F +GM+E I IL G ++ L+Y+H
Sbjct: 132 NITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPEGMSETLIRNILFGAVRGLNYLHQ 191
Query: 576 MGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEV 755
G +HRS+KASH+LIS DG V LSGL S++ HGQR R V+DFP++S V PWLSPE+
Sbjct: 192 NGCIHRSIKASHILISGDGLVTLSGLFHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSPEL 251
Query: 756 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 935
L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQMLL+KL G LD S P
Sbjct: 252 LRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLKGPPYSPLDASIFPQS 311
Query: 936 ELTMGAPRSAANPGLSE 986
E M RS + G+ E
Sbjct: 312 ESRMKNSRSGVDSGIGE 328
>ref|NP_001069360.2| serine/threonine-protein kinase OSR1 [Bos taurus].
Length = 527
Score = 136 bits (342), Expect = 4e-32
Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A P E V ++RINLE C M L+ E+ HP
Sbjct: 17 YELQEVIGSGATAV--VQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG------MNELAIAYILQGVLKA 557
NI+ Y +F+ +ELW+V ++ GS D+I G ++E IA IL+ VL+
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKNGVLDEATIATILKEVLEG 133
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
L+Y+H G +HR VKA ++L+ DG V ++ + + + G R + K +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR--NKVRKTFVGTPC 191
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q ++GYD K+DI+S GITA ELA G P+ P ++L+ L P L
Sbjct: 192 WMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
>ref|XP_002696990.1| PREDICTED: oxidative-stress responsive 1 [Bos taurus].
Length = 527
Score = 136 bits (342), Expect = 4e-32
Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A P E V ++RINLE C M L+ E+ HP
Sbjct: 17 YELQEVIGSGATAV--VQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG------MNELAIAYILQGVLKA 557
NI+ Y +F+ +ELW+V ++ GS D+I G ++E IA IL+ VL+
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKNGVLDEATIATILKEVLEG 133
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
L+Y+H G +HR VKA ++L+ DG V ++ + + + G R + K +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR--NKVRKTFVGTPC 191
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q ++GYD K+DI+S GITA ELA G P+ P ++L+ L P L
Sbjct: 192 WMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
>ref|XP_001787530.1| PREDICTED: oxidative-stress responsive 1 [Bos taurus].
Length = 527
Score = 136 bits (342), Expect = 4e-32
Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A P E V ++RINLE C M L+ E+ HP
Sbjct: 17 YELQEVIGSGATAV--VQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG------MNELAIAYILQGVLKA 557
NI+ Y +F+ +ELW+V ++ GS D+I G ++E IA IL+ VL+
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKNGVLDEATIATILKEVLEG 133
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
L+Y+H G +HR VKA ++L+ DG V ++ + + + G R + K +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR--NKVRKTFVGTPC 191
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q ++GYD K+DI+S GITA ELA G P+ P ++L+ L P L
Sbjct: 192 WMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
>ref|NP_001093420.1| serine/threonine-protein kinase 24 [Bos taurus].
Length = 433
Score = 105 bits (261), Expect = 9e-23
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 2/219 (0%)
Frame = +3
Query: 288 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAY 467
T + V ++ I+LE +E + +Q E+ V P + Y +++ D +LW++ ++
Sbjct: 46 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 104
Query: 468 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS 647
GSA DL+ +D E IA IL+ +LK LDY+H +HR +KA++VL+S G+V L+
Sbjct: 105 GSALDLLEPGPLD---ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 161
Query: 648 --GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 821
G+ L+ + V F W++PEV++Q+ YD+K+DI+S+GITA
Sbjct: 162 DFGVAGQLTDTQIKRNTFVGTPF---------WMAPEVIKQS--AYDSKADIWSLGITAI 210
Query: 822 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 938
ELA G P ++ ++L P L + P +E
Sbjct: 211 ELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 249
>ref|NP_001015602.1| serine/threonine-protein kinase 4 [Bos taurus].
Length = 487
Score = 102 bits (253), Expect = 7e-22
Identities = 61/214 (28%), Positives = 115/214 (53%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
+++L +G+G +V A +K TG+ V ++++ +E+ E++ E+ + + P
Sbjct: 30 FDVLEKLGEG--SYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK----EISIMQQCDSP 83
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
+++ Y ++ + +LW+V + GS D+I + E IA ILQ LK L+Y+H
Sbjct: 84 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHF 142
Query: 576 MGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEV 755
M +HR +KA ++L++ +G L+ + ++ V P W++PEV
Sbjct: 143 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-------WMAPEV 195
Query: 756 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 857
+Q+ GY+ +DI+S+GITA E+A G P+ D+
Sbjct: 196 IQE--IGYNCVADIWSLGITAIEMAEGKPPYADI 227
>ref|NP_899666.1| serine/threonine-protein kinase 25 [Bos taurus].
Length = 427
Score = 101 bits (252), Expect = 1e-21
Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 2/219 (0%)
Frame = +3
Query: 288 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAY 467
T E V ++ I+LE +E + +Q E+ V P I Y +++ +LW++ ++
Sbjct: 42 TKEVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGG 100
Query: 468 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS 647
GSA DL+ + E IA IL+ +LK LDY+H +HR +KA++VL+S G V L+
Sbjct: 101 GSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLA 157
Query: 648 --GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 821
G+ L+ + V F W++PEV++Q+ YD K+DI+S+GITA
Sbjct: 158 DFGVAGQLTDTQIKRNTFVGTPF---------WMAPEVIKQS--AYDFKADIWSLGITAI 206
Query: 822 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 938
ELA G P D+ ++L + P L + P +E
Sbjct: 207 ELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGHHSKPFKE 245
>ref|NP_001157258.1| serine/threonine-protein kinase MST4 [Bos taurus].
Length = 416
Score = 100 bits (249), Expect = 2e-21
Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Frame = +3
Query: 294 EYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGS 473
+ V ++ I+LE +E + +Q E+ V + Y +++ ++LW++ ++ GS
Sbjct: 48 QVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGS 106
Query: 474 AKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS-- 647
A DL+ D E IA +L+ +LK LDY+H +HR +KA++VL+S G V L+
Sbjct: 107 ALDLLRAGPFD---EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADF 163
Query: 648 GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACEL 827
G+ L+ + V F W++PEV+QQ+ YD+K+DI+S+GITA EL
Sbjct: 164 GVAGQLTDTQIKRNTFVGTPF---------WMAPEVIQQS--AYDSKADIWSLGITAIEL 212
Query: 828 ANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 923
A G P DM ++L P L+ T
Sbjct: 213 AKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFT 244
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 40,610,273
Number of extensions: 1133768
Number of successful extensions: 4308
Number of sequences better than 1.0e-05: 285
Number of HSP's gapped: 4033
Number of HSP's successfully gapped: 293
Length of query: 350
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 247
Effective length of database: 14,273,310
Effective search space: 3525507570
Effective search space used: 3525507570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009445
(1050 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_850260.1| PREDICTED: similar to protein kinase LYK5 isofo... 550 e-164
Alignment gi|XP_861036.1| PREDICTED: similar to protein kinase LYK5 isofo... 522 e-155
Alignment gi|XP_861009.1| PREDICTED: similar to protein kinase LYK5 isofo... 276 3e-74
Alignment gi|XP_536030.2| PREDICTED: similar to amyotrophic lateral scler... 270 2e-72
Alignment gi|XP_858798.1| PREDICTED: similar to amyotrophic lateral scler... 246 2e-65
Alignment gi|XP_858835.1| PREDICTED: similar to amyotrophic lateral scler... 246 3e-65
Alignment gi|XP_858866.1| PREDICTED: similar to amyotrophic lateral scler... 197 1e-50
Alignment gi|XP_849715.1| PREDICTED: similar to oxidative-stress responsi... 135 5e-32
Alignment gi|XP_535944.2| PREDICTED: similar to STE20/SPS1-related prolin... 132 4e-31
Alignment gi|XP_859626.1| PREDICTED: similar to oxidative-stress responsi... 108 6e-24
>ref|XP_850260.1| PREDICTED: similar to protein kinase LYK5 isoform 2 isoform 1
[Canis familiaris].
Length = 394
Score = 550 bits (1416), Expect(2) = e-164
Identities = 273/284 (96%), Positives = 278/284 (97%)
Frame = +3
Query: 135 TNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR 314
TNEASSESIAS SKQEIMSSFLPEGG YELLT+IGKGFEDLMTVNLARYKPTGEYVTVRR
Sbjct: 5 TNEASSESIASLSKQEIMSSFLPEGGRYELLTIIGKGFEDLMTVNLARYKPTGEYVTVRR 64
Query: 315 INLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICT 494
INLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICT
Sbjct: 65 INLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICT 124
Query: 495 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMI 674
HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH+LIS+DGKVYLSGLRSNLSMI
Sbjct: 125 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISSDGKVYLSGLRSNLSMI 184
Query: 675 SHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 854
SHGQRQRVVHDFPKYS+KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD
Sbjct: 185 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 244
Query: 855 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMGAPRSAANPGLSE 986
MPATQMLLEKLNGTVPCLLDTSTIPAEELTM RSAAN GLS+
Sbjct: 245 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMSTSRSAANSGLSD 288
Score = 47.4 bits (111), Expect(2) = e-164
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPSHPYHR 1048
SL TSTPRTSNGDSPSHPYHR
Sbjct: 289 SLATSTPRTSNGDSPSHPYHR 309
>ref|XP_861036.1| PREDICTED: similar to protein kinase LYK5 isoform 1 isoform 3
[Canis familiaris].
Length = 325
Score = 522 bits (1344), Expect(2) = e-155
Identities = 257/267 (96%), Positives = 262/267 (98%)
Frame = +3
Query: 186 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 365
MSSFLPEGG YELLT+IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE
Sbjct: 1 MSSFLPEGGRYELLTIIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 60
Query: 366 LHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 545
LHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG
Sbjct: 61 LHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 120
Query: 546 VLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSI 725
VLKALDYIHHMGYVHRSVKASH+LIS+DGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS+
Sbjct: 121 VLKALDYIHHMGYVHRSVKASHILISSDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 180
Query: 726 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 905
KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC
Sbjct: 181 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 240
Query: 906 LLDTSTIPAEELTMGAPRSAANPGLSE 986
LLDTSTIPAEELTM RSAAN GLS+
Sbjct: 241 LLDTSTIPAEELTMSTSRSAANSGLSD 267
Score = 47.4 bits (111), Expect(2) = e-155
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPSHPYHR 1048
SL TSTPRTSNGDSPSHPYHR
Sbjct: 268 SLATSTPRTSNGDSPSHPYHR 288
>ref|XP_861009.1| PREDICTED: similar to protein kinase LYK5 isoform 3 isoform 2
[Canis familiaris].
Length = 176
Score = 276 bits (705), Expect = 3e-74
Identities = 134/136 (98%), Positives = 135/136 (99%)
Frame = +3
Query: 186 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 365
MSSFLPEGG YELLT+IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE
Sbjct: 1 MSSFLPEGGRYELLTIIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 60
Query: 366 LHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 545
LHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG
Sbjct: 61 LHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 120
Query: 546 VLKALDYIHHMGYVHR 593
VLKALDYIHHMGYVHR
Sbjct: 121 VLKALDYIHHMGYVHR 136
Score = 81.6 bits (200), Expect = 1e-15
Identities = 35/41 (85%), Positives = 36/41 (87%)
Frame = +1
Query: 763 RIFRVMMPSPTSTAWESQPVNWPMATSPLRICLPPRCCWRS 885
RIFRV MPS TST WESQPV+WPMA SPLRIC PPRCCWRS
Sbjct: 136 RIFRVTMPSLTSTVWESQPVSWPMAMSPLRICPPPRCCWRS 176
>ref|XP_536030.2| PREDICTED: similar to amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 2 isoform 1 [Canis
familiaris].
Length = 414
Score = 270 bits (690), Expect = 2e-72
Identities = 148/319 (46%), Positives = 196/319 (61%)
Frame = +3
Query: 30 DCLLTPGPGLNF*N*SRSSH*ELMSFLVSKPERIRTNEASSESIASFSKQEIMSSFLPEG 209
DC T + + S + +LV +P A S + +K I S+ +
Sbjct: 5 DCFCTSRTQVESLRPEKQSETNIHQYLVDEP-------AFSRLPTTRAKDVICSTNVSH- 56
Query: 210 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFS 389
YEL IG+GF++L TV+LAR+ PTG VT++ NLE C++E + LQ + +S F
Sbjct: 57 --YELQVEIGRGFDNLTTVHLARHTPTGTLVTIKITNLENCTDERLKALQKAVILSHFFR 114
Query: 390 HPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 569
HPNI Y F + LWV++ FMAYGSA L+ T+F +GM+E I IL G ++ L Y+
Sbjct: 115 HPNITTYWTVFTVGSWLWVISPFMAYGSASQLLKTYFPEGMSETLIRNILFGAVRGLSYL 174
Query: 570 HHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSP 749
H G +HRS+KASH+LIS DG V LSGL S++ HGQR R V+DFP++S V PWLSP
Sbjct: 175 HQNGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSP 234
Query: 750 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 929
E+L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQMLL+KL G LD S P
Sbjct: 235 ELLRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLKGPPYSPLDVSIFP 294
Query: 930 AEELTMGAPRSAANPGLSE 986
E M RS + G+ E
Sbjct: 295 QSESRMKNSRSGVDSGIGE 313
>ref|XP_858798.1| PREDICTED: similar to amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 2 isoform 3 [Canis
familiaris].
Length = 284
Score = 246 bits (629), Expect = 2e-65
Identities = 132/281 (46%), Positives = 178/281 (63%)
Frame = +3
Query: 30 DCLLTPGPGLNF*N*SRSSH*ELMSFLVSKPERIRTNEASSESIASFSKQEIMSSFLPEG 209
DC T + + S + +LV +P A S + +K I S+ +
Sbjct: 5 DCFCTSRTQVESLRPEKQSETNIHQYLVDEP-------AFSRLPTTRAKDVICSTNVSH- 56
Query: 210 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFS 389
YEL IG+GF++L TV+LAR+ PTG VT++ NLE C++E + LQ + +S F
Sbjct: 57 --YELQVEIGRGFDNLTTVHLARHTPTGTLVTIKITNLENCTDERLKALQKAVILSHFFR 114
Query: 390 HPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 569
HPNI Y F + LWV++ FMAYGSA L+ T+F +GM+E I IL G ++ L Y+
Sbjct: 115 HPNITTYWTVFTVGSWLWVISPFMAYGSASQLLKTYFPEGMSETLIRNILFGAVRGLSYL 174
Query: 570 HHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSP 749
H G +HRS+KASH+LIS DG V LSGL S++ HGQR R V+DFP++S V PWLSP
Sbjct: 175 HQNGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSP 234
Query: 750 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 872
E+L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQ+
Sbjct: 235 ELLRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQL 275
>ref|XP_858835.1| PREDICTED: similar to amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 2 isoform 4 [Canis
familiaris].
Length = 356
Score = 246 bits (628), Expect = 3e-65
Identities = 132/281 (46%), Positives = 178/281 (63%)
Frame = +3
Query: 30 DCLLTPGPGLNF*N*SRSSH*ELMSFLVSKPERIRTNEASSESIASFSKQEIMSSFLPEG 209
DC T + + S + +LV +P A S + +K I S+ +
Sbjct: 5 DCFCTSRTQVESLRPEKQSETNIHQYLVDEP-------AFSRLPTTRAKDVICSTNVSH- 56
Query: 210 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFS 389
YEL IG+GF++L TV+LAR+ PTG VT++ NLE C++E + LQ + +S F
Sbjct: 57 --YELQVEIGRGFDNLTTVHLARHTPTGTLVTIKITNLENCTDERLKALQKAVILSHFFR 114
Query: 390 HPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 569
HPNI Y F + LWV++ FMAYGSA L+ T+F +GM+E I IL G ++ L Y+
Sbjct: 115 HPNITTYWTVFTVGSWLWVISPFMAYGSASQLLKTYFPEGMSETLIRNILFGAVRGLSYL 174
Query: 570 HHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSP 749
H G +HRS+KASH+LIS DG V LSGL S++ HGQR R V+DFP++S V PWLSP
Sbjct: 175 HQNGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSP 234
Query: 750 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 872
E+L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQ+
Sbjct: 235 ELLRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQV 275
>ref|XP_858866.1| PREDICTED: similar to amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 2 isoform 5 [Canis
familiaris].
Length = 277
Score = 197 bits (501), Expect = 1e-50
Identities = 99/176 (56%), Positives = 123/176 (69%)
Frame = +3
Query: 459 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKV 638
MAYGSA L+ T+F +GM+E I IL G ++ L Y+H G +HRS+KASH+LIS DG V
Sbjct: 1 MAYGSASQLLKTYFPEGMSETLIRNILFGAVRGLSYLHQNGCIHRSIKASHILISGDGLV 60
Query: 639 YLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 818
LSGL S++ HGQR R V+DFP++S V PWLSPE+L+Q+L GY+ KSDIYSVGITA
Sbjct: 61 TLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSPELLRQDLHGYNVKSDIYSVGITA 120
Query: 819 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMGAPRSAANPGLSE 986
CELA+G VPF+DM TQMLL+KL G LD S P E M RS + G+ E
Sbjct: 121 CELASGQVPFQDMHRTQMLLQKLKGPPYSPLDVSIFPQSESRMKNSRSGVDSGIGE 176
>ref|XP_849715.1| PREDICTED: similar to oxidative-stress responsive 1 isoform 2
[Canis familiaris].
Length = 527
Score = 135 bits (341), Expect = 5e-32
Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A P E V ++RINLE C M L+ E+ HP
Sbjct: 17 YELQEVIGSGATAV--VQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLIC------THFMDGMNELAIAYILQGVLKA 557
NI+ Y +F+ +ELW+V ++ GS D+I H ++E IA IL+ VL+
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEPTIATILKEVLEG 133
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
L+Y+H G +HR VKA ++L+ DG V ++ + + + G R + K +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR--NKVRKTFVGTPC 191
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q ++GYD K+DI+S GITA ELA G P+ P ++L+ L P L
Sbjct: 192 WMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
>ref|XP_535944.2| PREDICTED: similar to STE20/SPS1-related proline-alanine rich
protein kinase (Ste-20 related kinase)
(Serine/threonine-protein kinase 39) (DCHT) [Canis
familiaris].
Length = 666
Score = 132 bits (333), Expect = 4e-31
Identities = 85/243 (34%), Positives = 129/243 (53%), Gaps = 6/243 (2%)
Frame = +3
Query: 198 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVS 377
LP G LL +G G + V A KP E V ++RINLE C M L+ E+
Sbjct: 181 LPAWGFTALL--LGSGATAV--VQAALCKPRQERVAIKRINLEKCQTSMDELLK-EIQAM 235
Query: 378 KLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLIC------THFMDGMNELAIAYIL 539
SHPN++ Y +F+ +ELW+V ++ GS D+I H + E IA IL
Sbjct: 236 SQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATIL 295
Query: 540 QGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKY 719
+ VL+ LDY+H G +HR +KA ++L+ DG V ++ + + + G R + K
Sbjct: 296 KEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTR--NKVRKT 353
Query: 720 SIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV 899
+ W++PEV++Q ++GYD K+D++S GITA ELA G P+ P ++L+ L
Sbjct: 354 FVGTPCWMAPEVMEQ-VRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 412
Query: 900 PCL 908
P L
Sbjct: 413 PTL 415
>ref|XP_859626.1| PREDICTED: similar to oxidative-stress responsive 1 isoform 3
[Canis familiaris].
Length = 513
Score = 108 bits (271), Expect = 6e-24
Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A P E V ++RINLE C M L+ E+ HP
Sbjct: 17 YELQEVIGSGATAV--VQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLIC------THFMDGMNELAIAYILQGVLKA 557
NI+ Y +F+ +ELW+V ++ GS D+I H ++E IA IL+ VL+
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEPTIATILKEVLEG 133
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
L+Y+H G +HR VKA ++L+ DG V ++ + + + G R + K +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR--NKVRKTFVGTPC 191
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q + + ELA G P+ P ++L+ L P L
Sbjct: 192 WMAPEVMEQ---------------VLSIELATGAAPYHKYPPMKVLMLTLQNDPPSL 233
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 42,428,628
Number of extensions: 1171487
Number of successful extensions: 4977
Number of sequences better than 1.0e-05: 453
Number of HSP's gapped: 4594
Number of HSP's successfully gapped: 466
Length of query: 350
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 246
Effective length of database: 15,407,560
Effective search space: 3790259760
Effective search space used: 3790259760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009445
(1050 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003131340.2| PREDICTED: STE20-related kinase adapter prot... 525 e-149
Alignment gi|XP_003358049.1| PREDICTED: STE20-related kinase adapter prot... 503 e-143
Alignment gi|XP_003133635.2| PREDICTED: STE20-related kinase adapter prot... 265 3e-71
Alignment gi|NP_999507.1| serine/threonine-protein kinase OSR1 [Sus scrof... 136 2e-32
Alignment gi|XP_003361094.1| PREDICTED: STE20/SPS1-related proline-alanin... 128 5e-30
Alignment gi|XP_003359658.1| PREDICTED: STE20-related kinase adapter prot... 125 3e-29
Alignment gi|XP_003357929.1| PREDICTED: serine/threonine-protein kinase 2... 107 1e-23
Alignment gi|NP_001137199.1| serine/threonine-protein kinase MST4 [Sus sc... 101 6e-22
Alignment gi|XP_003133853.1| PREDICTED: serine/threonine-protein kinase 2... 100 1e-21
Alignment gi|XP_001928687.3| PREDICTED: serine/threonine-protein kinase P... 100 2e-21
>ref|XP_003131340.2| PREDICTED: STE20-related kinase adapter protein alpha-like isoform
1 [Sus scrofa].
Length = 276
Score = 525 bits (1352), Expect = e-149
Identities = 262/275 (95%), Positives = 267/275 (97%)
Frame = +3
Query: 99 MSFLVSKPERIRTNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLAR 278
MSFLVSKPERIRTNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLAR
Sbjct: 1 MSFLVSKPERIRTNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLAR 60
Query: 279 YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSF 458
YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSF
Sbjct: 61 YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSF 120
Query: 459 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKV 638
MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKV
Sbjct: 121 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKV 180
Query: 639 YLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 818
YLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA
Sbjct: 181 YLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 240
Query: 819 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 923
CELANGHVPFKDMPATQ+ L+ + CLL ++T
Sbjct: 241 CELANGHVPFKDMPATQVSLQPRGFLLACLLSSNT 275
>ref|XP_003358049.1| PREDICTED: STE20-related kinase adapter protein alpha-like isoform
2 [Sus scrofa].
Length = 268
Score = 503 bits (1294), Expect = e-143
Identities = 250/263 (95%), Positives = 255/263 (96%)
Frame = +3
Query: 135 TNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR 314
TNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR
Sbjct: 5 TNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR 64
Query: 315 INLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICT 494
INLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICT
Sbjct: 65 INLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICT 124
Query: 495 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMI 674
HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMI
Sbjct: 125 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMI 184
Query: 675 SHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 854
SHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD
Sbjct: 185 SHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 244
Query: 855 MPATQMLLEKLNGTVPCLLDTST 923
MPATQ+ L+ + CLL ++T
Sbjct: 245 MPATQVSLQPRGFLLACLLSSNT 267
>ref|XP_003133635.2| PREDICTED: STE20-related kinase adapter protein beta [Sus scrofa].
Length = 419
Score = 265 bits (677), Expect = 3e-71
Identities = 137/258 (53%), Positives = 175/258 (67%), Gaps = 1/258 (0%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL IG+GF++L +V+LAR+ PTG VTV+ NLE C+ E + LQ + +S F HP
Sbjct: 58 YELQVEIGRGFDNLTSVHLARHTPTGTLVTVKITNLENCTEERLKALQKAVILSHFFRHP 117
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
NI Y F + LWV++ FMAYGSA L+ T+F DGM+E I IL G ++ L+Y+H
Sbjct: 118 NITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPDGMSETLIRNILFGAVRGLNYLHQ 177
Query: 576 MGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEV 755
G +HRS+KASH+LIS DG V LSGL S++ HGQR R V+DFP++S V PWLSPE+
Sbjct: 178 NGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSPEL 237
Query: 756 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD-TSTIPA 932
L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQMLL+KL G LD S P
Sbjct: 238 LRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLKGPPYSPLDIISIFPQ 297
Query: 933 EELTMGAPRSAANPGLSE 986
E M RS + G+ E
Sbjct: 298 SESRMKNSRSGVDSGIGE 315
>ref|NP_999507.1| serine/threonine-protein kinase OSR1 [Sus scrofa].
Length = 529
Score = 136 bits (343), Expect = 2e-32
Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A P E V ++RINLE C M L+ E+ HP
Sbjct: 17 YELQEVIGSGATAV--VQAAYCTPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLIC------THFMDGMNELAIAYILQGVLKA 557
NI+ Y +F+ +ELW+V ++ GS D+I H ++E IA IL+ VL+
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEATIATILREVLEG 133
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
L+Y+H G +HR VKA ++L+ DG V ++ + + + G R + K +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR--NKVRKTFVGTPC 191
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q ++GYD K+DI+S GITA ELA G P+ P ++L+ L P L
Sbjct: 192 WMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
>ref|XP_003361094.1| PREDICTED: STE20/SPS1-related proline-alanine-rich protein
kinase-like, partial [Sus scrofa].
Length = 292
Score = 128 bits (322), Expect = 5e-30
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 6/215 (2%)
Frame = +3
Query: 264 VNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELW 443
V A KP E V ++RINLE C M L+ E+ SHPN++ Y +F+ +ELW
Sbjct: 78 VQAALCKPRQERVAIKRINLEKCQTSMDELLK-EIQAMSQCSHPNVVTYYTSFVVKDELW 136
Query: 444 VVTSFMAYGSAKDLIC------THFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKA 605
+V ++ GS D+I H + E IA IL+ VL+ LDY+H G +HR +KA
Sbjct: 137 LVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKA 196
Query: 606 SHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDA 785
++L+ DG V ++ + + + G R + K + W++PEV++Q ++GYD
Sbjct: 197 GNILLGEDGSVQIADFGVSAFLATGGDVTR--NKVRKTFVGTPCWMAPEVMEQ-VRGYDF 253
Query: 786 KSDIYSVGITACELANGHVPFKDMPATQMLLEKLN 890
K+D++S GITA ELA G P+ P +++ + N
Sbjct: 254 KADMWSFGITAIELATGAAPYHKYPPMKVITMENN 288
>ref|XP_003359658.1| PREDICTED: STE20-related kinase adapter protein beta-like [Sus
scrofa].
Length = 191
Score = 125 bits (315), Expect = 3e-29
Identities = 63/137 (45%), Positives = 89/137 (64%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL IG+GF++L +V+LAR+ PTG VTV+ NLE C+ E + LQ + +S F HP
Sbjct: 44 YELQVEIGRGFDNLTSVHLARHTPTGTLVTVKITNLENCTEERLKALQKAVILSHFFRHP 103
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
NI Y F + LWV++ FMAYGSA L+ T+F DGM+E I IL G ++ L+Y+H
Sbjct: 104 NITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPDGMSETLIRNILFGAVRGLNYLHQ 163
Query: 576 MGYVHRSVKASHVLISA 626
G +HR+V+ + + SA
Sbjct: 164 NGCIHRNVQTTSFVPSA 180
>ref|XP_003357929.1| PREDICTED: serine/threonine-protein kinase 24-like [Sus scrofa].
Length = 578
Score = 107 bits (266), Expect = 1e-23
Identities = 71/219 (32%), Positives = 118/219 (53%), Gaps = 2/219 (0%)
Frame = +3
Query: 288 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAY 467
T + V ++ I+LE +E + +Q E+ V P + Y +++ D +LW++ ++
Sbjct: 191 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 249
Query: 468 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS 647
GSA DL+ +D E IA IL+ +LK LDY+H +HR +KA++VL+S G+V L+
Sbjct: 250 GSALDLLEPGPLD---ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 306
Query: 648 --GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 821
G+ L+ + V F W++PEV++Q+ YD+K+DI+S+GITA
Sbjct: 307 DFGVAGQLTDTQIKRNTFVGTPF---------WMAPEVIKQS--AYDSKADIWSLGITAI 355
Query: 822 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 938
ELA G P ++ ++L P L T + P +E
Sbjct: 356 ELAKGEPPHSELHPMKVLFLIPKNNPPTLEGTYSKPLKE 394
>ref|NP_001137199.1| serine/threonine-protein kinase MST4 [Sus scrofa].
Length = 416
Score = 101 bits (252), Expect = 6e-22
Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 2/214 (0%)
Frame = +3
Query: 288 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAY 467
T + V ++ I+LE +E + +Q E+ V + Y +++ ++LW++ ++
Sbjct: 46 TQQVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGG 104
Query: 468 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS 647
GSA DL+ D E IA +L+ +LK LDY+H +HR +KA++VL+S G V L+
Sbjct: 105 GSALDLLRAGPFD---EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLA 161
Query: 648 --GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 821
G+ L+ + V F W++PEV+QQ+ YD+K+DI+S+GITA
Sbjct: 162 DFGVAGQLTDTQIKRNTFVGTPF---------WMAPEVIQQS--AYDSKADIWSLGITAI 210
Query: 822 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 923
ELA G P DM ++L P L+ T
Sbjct: 211 ELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFT 244
>ref|XP_003133853.1| PREDICTED: serine/threonine-protein kinase 25-like [Sus scrofa].
Length = 433
Score = 100 bits (250), Expect = 1e-21
Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 2/219 (0%)
Frame = +3
Query: 288 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAY 467
T E V ++ I+LE +E + +Q E+ V P I Y +++ +LW++ ++
Sbjct: 49 TKEVVAIKTIDLEEAEDE-IEDIQQEITVLSQCDSPYITRYFGSYLKGTKLWIIMEYLGG 107
Query: 468 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS 647
GSA DL+ + E IA IL+ +L+ LDY+H +HR +KA++VL+S G V L+
Sbjct: 108 GSALDLLKP---GPLEETYIATILREILRGLDYLHSERKIHRDIKAANVLLSEQGDVKLA 164
Query: 648 --GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 821
G+ L+ + V F W++PEV++Q+ YD K+DI+S+GITA
Sbjct: 165 DFGVAGQLTDTQIKRNTFVGTPF---------WMAPEVIKQS--AYDFKADIWSLGITAI 213
Query: 822 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 938
ELA G P D+ ++L + P L + P +E
Sbjct: 214 ELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGHHSKPFKE 252
>ref|XP_001928687.3| PREDICTED: serine/threonine-protein kinase PAK 7 [Sus scrofa].
Length = 719
Score = 100 bits (248), Expect = 2e-21
Identities = 66/216 (30%), Positives = 117/216 (54%), Gaps = 2/216 (0%)
Frame = +3
Query: 234 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYR 413
IG+G ++ + A K TG+ V V++++L + F E+ + + + H N++
Sbjct: 455 IGEGSTGIVCI--ATEKHTGKQVAVKKMDLRKQQRRELLF--NEVVIMRDYHHDNVVDMY 510
Query: 414 ATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHR 593
+++ +ELWVV F+ G+ D++ TH MNE IA + VLKAL Y+H+ G +HR
Sbjct: 511 NSYLVSDELWVVMEFLEGGALTDIV-THTR--MNEEQIATVCLSVLKALSYLHNQGVIHR 567
Query: 594 SVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPK-YSIKVLP-WLSPEVLQQN 767
+K+ +L+++DG++ LS G +V + PK S+ P W++PEV+ +
Sbjct: 568 DIKSDSILLTSDGRIKLS---------DFGFCAQVSKEVPKRKSLVGTPYWMAPEVISR- 617
Query: 768 LQGYDAKSDIYSVGITACELANGHVPFKDMPATQML 875
Y + DI+S+GI E+ +G P+ + P Q +
Sbjct: 618 -LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM 652
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,169,980
Number of extensions: 729994
Number of successful extensions: 3028
Number of sequences better than 1.0e-05: 167
Number of HSP's gapped: 2863
Number of HSP's successfully gapped: 171
Length of query: 350
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 250
Effective length of database: 8,854,232
Effective search space: 2213558000
Effective search space used: 2213558000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009445
(1050 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_082402.1| STE20-related kinase adapter protein alpha [Mus... 543 e-159
Alignment gi|NP_766244.4| STE20-related kinase adapter protein beta [Mus ... 265 3e-71
Alignment gi|NP_058562.1| STE20/SPS1-related proline-alanine-rich protein... 138 6e-33
Alignment gi|NP_598746.1| serine/threonine-protein kinase OSR1 [Mus muscu... 112 4e-25
Alignment gi|NP_663440.1| serine/threonine-protein kinase 24 [Mus musculu... 106 3e-23
Alignment gi|NP_598490.1| serine/threonine-protein kinase MST4 [Mus muscu... 102 7e-22
Alignment gi|NP_067395.1| serine/threonine-protein kinase 4 [Mus musculus]. 102 7e-22
Alignment gi|NP_067512.3| serine/threonine-protein kinase 25 [Mus musculu... 101 1e-21
Alignment gi|NP_766446.2| serine/threonine-protein kinase PAK 7 [Mus musc... 100 3e-21
Alignment gi|NP_001139326.1| serine/threonine-protein kinase PAK 6 [Mus m... 99 7e-21
>ref|NP_082402.1| STE20-related kinase adapter protein alpha [Mus musculus].
Length = 394
Score = 543 bits (1400), Expect(2) = e-159
Identities = 269/283 (95%), Positives = 275/283 (97%)
Frame = +3
Query: 138 NEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI 317
NEASSESIASFSK E+MSSFLPEGGCYELLT+IGKGFEDLMTVNLARYKPTGEYVTVRRI
Sbjct: 6 NEASSESIASFSKPEMMSSFLPEGGCYELLTIIGKGFEDLMTVNLARYKPTGEYVTVRRI 65
Query: 318 NLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTH 497
NLEACSNEMVTFLQGELHVSKLFSHPNI+PYRATFIADNELWVVTSFMAYGSAKDLI TH
Sbjct: 66 NLEACSNEMVTFLQGELHVSKLFSHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIGTH 125
Query: 498 FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMIS 677
FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH+LIS DGKVYLSGLRSNLSMIS
Sbjct: 126 FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISTDGKVYLSGLRSNLSMIS 185
Query: 678 HGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 857
HGQRQR VHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM
Sbjct: 186 HGQRQRAVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 245
Query: 858 PATQMLLEKLNGTVPCLLDTSTIPAEELTMGAPRSAANPGLSE 986
PATQMLLEKLNGTVPCLLDTSTIPAEELTM RS ANPGL++
Sbjct: 246 PATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSIANPGLND 288
Score = 36.2 bits (82), Expect(2) = e-159
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPSHPYHR 1048
SL + R SNGDSPSHPYHR
Sbjct: 289 SLAAGSLRPSNGDSPSHPYHR 309
>ref|NP_766244.4| STE20-related kinase adapter protein beta [Mus musculus].
Length = 418
Score = 265 bits (678), Expect = 3e-71
Identities = 135/257 (52%), Positives = 174/257 (67%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL IG+GF++L +V+LAR+ PTG VTV+ NLE+C+ E + LQ + +S F HP
Sbjct: 58 YELQVEIGRGFDNLTSVHLARHTPTGTLVTVKITNLESCTEERLKALQRAVILSHFFQHP 117
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
NI Y F + LWV++ FMAYGSA L+ T+F DGM+E I IL G ++ L+Y+H
Sbjct: 118 NITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPDGMSETLIRNILFGAVQGLNYLHQ 177
Query: 576 MGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEV 755
G +HRS KASH+LIS DG V LSGL S++ HGQR R V DFP++S V PWLSPE+
Sbjct: 178 NGCIHRSFKASHILISGDGLVTLSGLSHLHSLLKHGQRHRAVFDFPQFSTSVQPWLSPEL 237
Query: 756 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 935
L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQMLL+KL G LD S P
Sbjct: 238 LRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLKGPPYSPLDVSIFPQS 297
Query: 936 ELTMGAPRSAANPGLSE 986
+ M +S + G+ E
Sbjct: 298 DSRMRNSQSGVDSGIGE 314
>ref|NP_058562.1| STE20/SPS1-related proline-alanine-rich protein kinase [Mus
musculus].
Length = 556
Score = 138 bits (348), Expect = 6e-33
Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A KP E V ++RINLE C M L+ E+ SHP
Sbjct: 75 YELQEVIGSGATAV--VQAALCKPRQERVAIKRINLEKCQTSMDELLK-EIQAMSQCSHP 131
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLIC------THFMDGMNELAIAYILQGVLKA 557
N++ Y +F+ +ELW+V ++ GS D+I H + E IA IL+ VL+
Sbjct: 132 NVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEG 191
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
LDY+H G +HR +KA ++L+ DG V ++ + + + G R + K +
Sbjct: 192 LDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTR--NKVRKTFVGTPC 249
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q ++GYD K+D++S GITA ELA G P+ P ++L+ L P L
Sbjct: 250 WMAPEVMEQ-VRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTL 305
>ref|NP_598746.1| serine/threonine-protein kinase OSR1 [Mus musculus].
Length = 471
Score = 112 bits (281), Expect = 4e-25
Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 6/188 (3%)
Frame = +3
Query: 363 ELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLIC------THFMDGMNELA 524
E+ HPNI+ Y +F+ +ELW+V ++ GS D+I H ++E
Sbjct: 7 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEPT 66
Query: 525 IAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVH 704
IA IL+ VL+ L+Y+H G +HR VKA ++L+ DG V ++ + + + G R +
Sbjct: 67 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR--N 124
Query: 705 DFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK 884
K + W++PEV++Q ++GYD K+DI+S GITA ELA G P+ P ++L+
Sbjct: 125 KVRKTFVGTPCWMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 183
Query: 885 LNGTVPCL 908
L P L
Sbjct: 184 LQNDPPSL 191
>ref|NP_663440.1| serine/threonine-protein kinase 24 [Mus musculus].
Length = 431
Score = 106 bits (264), Expect = 3e-23
Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 2/219 (0%)
Frame = +3
Query: 288 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAY 467
T + V ++ I+LE +E + +Q E+ V P + Y +++ D +LW++ ++
Sbjct: 46 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 104
Query: 468 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS 647
GSA DL+ +D E+ IA IL+ +LK LDY+H +HR +KA++VL+S G+V L+
Sbjct: 105 GSALDLLEPGPLD---EIQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 161
Query: 648 --GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 821
G+ L+ + V F W++PEV++Q+ YD+K+DI+S+GITA
Sbjct: 162 DFGVAGQLTDTQIKRNTFVGTPF---------WMAPEVIKQS--AYDSKADIWSLGITAI 210
Query: 822 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 938
ELA G P ++ ++L P L + P +E
Sbjct: 211 ELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 249
>ref|NP_598490.1| serine/threonine-protein kinase MST4 [Mus musculus].
Length = 416
Score = 102 bits (253), Expect = 7e-22
Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 2/214 (0%)
Frame = +3
Query: 288 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAY 467
T + V ++ I+LE +E + +Q E+ V + Y +++ ++LW++ ++
Sbjct: 46 TQQVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGG 104
Query: 468 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS 647
GSA DL+ D E IA +L+ +LK LDY+H +HR +KA++VL+S G V L+
Sbjct: 105 GSALDLLRAGPFD---EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLA 161
Query: 648 --GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 821
G+ L+ + V F W++PEV+QQ+ YD+K+DI+S+GITA
Sbjct: 162 DFGVAGQLTDTQIKRNTFVGTPF---------WMAPEVIQQS--AYDSKADIWSLGITAI 210
Query: 822 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 923
ELA G P DM ++L P L+ T
Sbjct: 211 ELAKGEPPNSDMHPMRVLFLIPKNNPPTLIGDFT 244
>ref|NP_067395.1| serine/threonine-protein kinase 4 [Mus musculus].
Length = 487
Score = 102 bits (253), Expect = 7e-22
Identities = 61/214 (28%), Positives = 115/214 (53%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
+++L +G+G +V A +K TG+ V ++++ +E+ E++ E+ + + P
Sbjct: 30 FDVLEKLGEG--SYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK----EISIMQQCDSP 83
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
+++ Y ++ + +LW+V + GS D+I + E IA ILQ LK L+Y+H
Sbjct: 84 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHF 142
Query: 576 MGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEV 755
M +HR +KA ++L++ +G L+ + ++ V P W++PEV
Sbjct: 143 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-------WMAPEV 195
Query: 756 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 857
+Q+ GY+ +DI+S+GITA E+A G P+ D+
Sbjct: 196 IQE--IGYNCVADIWSLGITAIEMAEGKPPYADI 227
>ref|NP_067512.3| serine/threonine-protein kinase 25 [Mus musculus].
Length = 426
Score = 101 bits (251), Expect = 1e-21
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 2/219 (0%)
Frame = +3
Query: 288 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAY 467
T E V ++ I+LE +E + +Q E+ V P I Y +++ +LW++ ++
Sbjct: 42 TKEVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGG 100
Query: 468 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLS 647
GSA DL+ + E IA IL+ +LK LDY+H +HR +KA++VL+S G V L+
Sbjct: 101 GSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLA 157
Query: 648 --GLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 821
G+ L+ + V F W++PEV++Q+ YD K+DI+S+GITA
Sbjct: 158 DFGVAGQLTDTQIKRNTFVGTPF---------WMAPEVIKQS--AYDFKADIWSLGITAI 206
Query: 822 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 938
ELA G P D+ ++L P L + P +E
Sbjct: 207 ELAKGEPPNSDLHPMRVLFLIPKNNPPTLEGHHSKPFKE 245
>ref|NP_766446.2| serine/threonine-protein kinase PAK 7 [Mus musculus].
Length = 719
Score = 99.8 bits (247), Expect = 3e-21
Identities = 66/216 (30%), Positives = 117/216 (54%), Gaps = 2/216 (0%)
Frame = +3
Query: 234 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYR 413
IG+G ++ + A K TG+ V V++++L + F E+ + + + H N++
Sbjct: 455 IGEGSTGIVCI--ATEKHTGKQVAVKKMDLRKQQRRELLF--NEVVIMRDYHHDNVVDMY 510
Query: 414 ATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHR 593
+++ +ELWVV F+ G+ D++ TH MNE IA + VLKAL Y+H+ G +HR
Sbjct: 511 NSYLVGDELWVVMEFLEGGALTDIV-THTR--MNEEQIATVCLSVLKALSYLHNQGVIHR 567
Query: 594 SVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPK-YSIKVLP-WLSPEVLQQN 767
+K+ +L+++DG++ LS G +V + PK S+ P W++PEV+ +
Sbjct: 568 DIKSDSILLTSDGRIKLS---------DFGFCAQVSKEVPKRKSLVGTPYWMAPEVISR- 617
Query: 768 LQGYDAKSDIYSVGITACELANGHVPFKDMPATQML 875
Y + DI+S+GI E+ +G P+ + P Q +
Sbjct: 618 -LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM 652
>ref|NP_001139326.1| serine/threonine-protein kinase PAK 6 [Mus musculus].
Length = 682
Score = 98.6 bits (244), Expect = 7e-21
Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 3/232 (1%)
Frame = +3
Query: 234 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYR 413
IG+G + V LAR K +G V V+ ++L + F E+ + + + H N++
Sbjct: 414 IGEGSTGI--VCLAREKHSGRQVAVKMMDLRKQQRRELLF--NEVVIMRDYQHLNVVEMY 469
Query: 414 ATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHR 593
+++ ELWV+ F+ G+ D+I +NE IA + + VL+AL Y+H G +HR
Sbjct: 470 KSYLVGEELWVLMEFLQGGALTDIIS---QVRLNEEQIATVCEAVLQALAYLHAQGVIHR 526
Query: 594 SVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPK-YSIKVLP-WLSPEVLQQN 767
+K+ +L++ DG+V LS G ++ D PK S+ P W++PEV+ ++
Sbjct: 527 DIKSDSILLTLDGRVKLS---------DFGFCAQISKDVPKRKSLVGTPYWMAPEVISRS 577
Query: 768 LQGYDAKSDIYSVGITACELANGHVP-FKDMPATQMLLEKLNGTVPCLLDTS 920
L Y + DI+S+GI E+ +G P F D P M ++L + P L S
Sbjct: 578 L--YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM--KRLRDSAPPKLKNS 625
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,314,274
Number of extensions: 968189
Number of successful extensions: 4007
Number of sequences better than 1.0e-05: 326
Number of HSP's gapped: 3695
Number of HSP's successfully gapped: 331
Length of query: 350
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 248
Effective length of database: 12,553,887
Effective search space: 3113363976
Effective search space used: 3113363976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009445
(1050 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003787.1| STE20-related kinase adapter protein alpha i... 558 e-165
Alignment gi|NP_001159441.1| STE20-related kinase adapter protein alpha i... 573 e-164
Alignment gi|NP_001003786.1| STE20-related kinase adapter protein alpha i... 551 e-163
Alignment gi|NP_699166.2| STE20-related kinase adapter protein alpha isof... 551 e-163
Alignment gi|NP_001003788.1| STE20-related kinase adapter protein alpha i... 522 e-155
Alignment gi|NP_001159442.1| STE20-related kinase adapter protein alpha i... 500 e-142
Alignment gi|NP_001193793.1| STE20-related kinase adapter protein beta is... 266 2e-71
Alignment gi|NP_061041.2| STE20-related kinase adapter protein beta isofo... 266 2e-71
Alignment gi|NP_037365.2| STE20/SPS1-related proline-alanine-rich protein... 138 7e-33
Alignment gi|NP_005100.1| serine/threonine-protein kinase OSR1 [Homo sapi... 136 4e-32
>ref|NP_001003787.1| STE20-related kinase adapter protein alpha isoform 1 [Homo
sapiens].
Length = 431
Score = 558 bits (1437), Expect(2) = e-165
Identities = 283/325 (87%), Positives = 290/325 (89%), Gaps = 29/325 (8%)
Frame = +3
Query: 99 MSFLVSKPERIR-----------------------------TNEASSESIASFSKQEIMS 191
MSFLVSKPERIR TN+ASSESIASFSKQE+MS
Sbjct: 1 MSFLVSKPERIRRWVSEKFIVEGLRDLELFGEQPPGDTRRKTNDASSESIASFSKQEVMS 60
Query: 192 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 371
SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH
Sbjct: 61 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 120
Query: 372 VSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 551
VSKLF+HPNI+PYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL
Sbjct: 121 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 180
Query: 552 KALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKV 731
KALDYIHHMGYVHRSVKASH+LIS DGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS+KV
Sbjct: 181 KALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV 240
Query: 732 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 911
LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL
Sbjct: 241 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 300
Query: 912 DTSTIPAEELTMGAPRSAANPGLSE 986
DTSTIPAEELTM RS AN GLS+
Sbjct: 301 DTSTIPAEELTMSPSRSVANSGLSD 325
Score = 44.3 bits (103), Expect(2) = e-165
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPSHPYHR 1048
SL TSTPR SNGDSPSHPYHR
Sbjct: 326 SLTTSTPRPSNGDSPSHPYHR 346
>ref|NP_001159441.1| STE20-related kinase adapter protein alpha isoform 5 [Homo
sapiens].
Length = 314
Score = 573 bits (1477), Expect(2) = e-164
Identities = 283/296 (95%), Positives = 290/296 (97%)
Frame = +3
Query: 99 MSFLVSKPERIRTNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLAR 278
MSFLVSKPERIRTN+ASSESIASFSKQE+MSSFLPEGGCYELLTVIGKGFEDLMTVNLAR
Sbjct: 1 MSFLVSKPERIRTNDASSESIASFSKQEVMSSFLPEGGCYELLTVIGKGFEDLMTVNLAR 60
Query: 279 YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSF 458
YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF+HPNI+PYRATFIADNELWVVTSF
Sbjct: 61 YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 120
Query: 459 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKV 638
MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH+LIS DGKV
Sbjct: 121 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV 180
Query: 639 YLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 818
YLSGLRSNLSMISHGQRQRVVHDFPKYS+KVLPWLSPEVLQQNLQGYDAKSDIYSVGITA
Sbjct: 181 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 240
Query: 819 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMGAPRSAANPGLSE 986
CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTM RS AN GLS+
Sbjct: 241 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSD 296
Score = 24.6 bits (52), Expect(2) = e-164
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPS 1033
SL TSTPR SNG P+
Sbjct: 297 SLTTSTPRPSNGPVPA 312
>ref|NP_001003786.1| STE20-related kinase adapter protein alpha isoform 2 [Homo
sapiens].
Length = 394
Score = 551 bits (1419), Expect(2) = e-163
Identities = 271/284 (95%), Positives = 278/284 (97%)
Frame = +3
Query: 135 TNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR 314
TN+ASSESIASFSKQE+MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR
Sbjct: 5 TNDASSESIASFSKQEVMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR 64
Query: 315 INLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICT 494
INLEACSNEMVTFLQGELHVSKLF+HPNI+PYRATFIADNELWVVTSFMAYGSAKDLICT
Sbjct: 65 INLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT 124
Query: 495 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMI 674
HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH+LIS DGKVYLSGLRSNLSMI
Sbjct: 125 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 184
Query: 675 SHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 854
SHGQRQRVVHDFPKYS+KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD
Sbjct: 185 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 244
Query: 855 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMGAPRSAANPGLSE 986
MPATQMLLEKLNGTVPCLLDTSTIPAEELTM RS AN GLS+
Sbjct: 245 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSD 288
Score = 44.3 bits (103), Expect(2) = e-163
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPSHPYHR 1048
SL TSTPR SNGDSPSHPYHR
Sbjct: 289 SLTTSTPRPSNGDSPSHPYHR 309
>ref|NP_699166.2| STE20-related kinase adapter protein alpha isoform 3 [Homo
sapiens].
Length = 348
Score = 551 bits (1419), Expect(2) = e-163
Identities = 271/284 (95%), Positives = 278/284 (97%)
Frame = +3
Query: 135 TNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR 314
TN+ASSESIASFSKQE+MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR
Sbjct: 5 TNDASSESIASFSKQEVMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRR 64
Query: 315 INLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICT 494
INLEACSNEMVTFLQGELHVSKLF+HPNI+PYRATFIADNELWVVTSFMAYGSAKDLICT
Sbjct: 65 INLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT 124
Query: 495 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMI 674
HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH+LIS DGKVYLSGLRSNLSMI
Sbjct: 125 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 184
Query: 675 SHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 854
SHGQRQRVVHDFPKYS+KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD
Sbjct: 185 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 244
Query: 855 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMGAPRSAANPGLSE 986
MPATQMLLEKLNGTVPCLLDTSTIPAEELTM RS AN GLS+
Sbjct: 245 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSD 288
Score = 44.3 bits (103), Expect(2) = e-163
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPSHPYHR 1048
SL TSTPR SNGDSPSHPYHR
Sbjct: 289 SLTTSTPRPSNGDSPSHPYHR 309
>ref|NP_001003788.1| STE20-related kinase adapter protein alpha isoform 4 [Homo
sapiens].
Length = 373
Score = 522 bits (1345), Expect(2) = e-155
Identities = 256/267 (95%), Positives = 261/267 (97%)
Frame = +3
Query: 186 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 365
MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE
Sbjct: 1 MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 60
Query: 366 LHVSKLFSHPNILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 545
LHVSKLF+HPNI+PYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG
Sbjct: 61 LHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 120
Query: 546 VLKALDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSI 725
VLKALDYIHHMGYVHRSVKASH+LIS DGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS+
Sbjct: 121 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 180
Query: 726 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 905
KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC
Sbjct: 181 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 240
Query: 906 LLDTSTIPAEELTMGAPRSAANPGLSE 986
LLDTSTIPAEELTM RS AN GLS+
Sbjct: 241 LLDTSTIPAEELTMSPSRSVANSGLSD 267
Score = 44.3 bits (103), Expect(2) = e-155
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPSHPYHR 1048
SL TSTPR SNGDSPSHPYHR
Sbjct: 268 SLTTSTPRPSNGDSPSHPYHR 288
>ref|NP_001159442.1| STE20-related kinase adapter protein alpha isoform 6 [Homo
sapiens].
Length = 299
Score = 500 bits (1288), Expect(2) = e-142
Identities = 255/296 (86%), Positives = 264/296 (89%)
Frame = +3
Query: 99 MSFLVSKPERIRTNEASSESIASFSKQEIMSSFLPEGGCYELLTVIGKGFEDLMTVNLAR 278
MSFLVSKPERIR + + F+ EG +L GKGFEDLMTVNLAR
Sbjct: 1 MSFLVSKPERIR--------------RWVSEKFIVEG-LRDLELFGGKGFEDLMTVNLAR 45
Query: 279 YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHPNILPYRATFIADNELWVVTSF 458
YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF+HPNI+PYRATFIADNELWVVTSF
Sbjct: 46 YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 105
Query: 459 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHVLISADGKV 638
MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH+LIS DGKV
Sbjct: 106 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV 165
Query: 639 YLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 818
YLSGLRSNLSMISHGQRQRVVHDFPKYS+KVLPWLSPEVLQQNLQGYDAKSDIYSVGITA
Sbjct: 166 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 225
Query: 819 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMGAPRSAANPGLSE 986
CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTM RS AN GLS+
Sbjct: 226 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSD 281
Score = 24.6 bits (52), Expect(2) = e-142
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 986 SLGTSTPRTSNGDSPS 1033
SL TSTPR SNG P+
Sbjct: 282 SLTTSTPRPSNGPVPA 297
>ref|NP_001193793.1| STE20-related kinase adapter protein beta isoform 2 [Homo sapiens].
Length = 377
Score = 266 bits (680), Expect = 2e-71
Identities = 134/257 (52%), Positives = 175/257 (68%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL IG+GF++L +V+LAR+ PTG VT++ NLE C+ E + LQ + +S F HP
Sbjct: 58 YELQVEIGRGFDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFRHP 117
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
NI Y F + LWV++ FMAYGSA L+ T+F +GM+E I IL G ++ L+Y+H
Sbjct: 118 NITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPEGMSETLIRNILFGAVRGLNYLHQ 177
Query: 576 MGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEV 755
G +HRS+KASH+LIS DG V LSGL S++ HGQR R V+DFP++S V PWLSPE+
Sbjct: 178 NGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSPEL 237
Query: 756 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 935
L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQMLL+KL G LD S P
Sbjct: 238 LRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLKGPPYSPLDISIFPQS 297
Query: 936 ELTMGAPRSAANPGLSE 986
E M +S + G+ E
Sbjct: 298 ESRMKNSQSGVDSGIGE 314
>ref|NP_061041.2| STE20-related kinase adapter protein beta isoform 1 [Homo sapiens].
Length = 418
Score = 266 bits (680), Expect = 2e-71
Identities = 134/257 (52%), Positives = 175/257 (68%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL IG+GF++L +V+LAR+ PTG VT++ NLE C+ E + LQ + +S F HP
Sbjct: 58 YELQVEIGRGFDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFRHP 117
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 575
NI Y F + LWV++ FMAYGSA L+ T+F +GM+E I IL G ++ L+Y+H
Sbjct: 118 NITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPEGMSETLIRNILFGAVRGLNYLHQ 177
Query: 576 MGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLPWLSPEV 755
G +HRS+KASH+LIS DG V LSGL S++ HGQR R V+DFP++S V PWLSPE+
Sbjct: 178 NGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSPEL 237
Query: 756 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 935
L+Q+L GY+ KSDIYSVGITACELA+G VPF+DM TQMLL+KL G LD S P
Sbjct: 238 LRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQMLLQKLKGPPYSPLDISIFPQS 297
Query: 936 ELTMGAPRSAANPGLSE 986
E M +S + G+ E
Sbjct: 298 ESRMKNSQSGVDSGIGE 314
>ref|NP_037365.2| STE20/SPS1-related proline-alanine-rich protein kinase [Homo
sapiens].
Length = 545
Score = 138 bits (348), Expect = 7e-33
Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A KP E V ++RINLE C M L+ E+ SHP
Sbjct: 63 YELQEVIGSGATAV--VQAALCKPRQERVAIKRINLEKCQTSMDELLK-EIQAMSQCSHP 119
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLIC------THFMDGMNELAIAYILQGVLKA 557
N++ Y +F+ +ELW+V ++ GS D+I H + E IA IL+ VL+
Sbjct: 120 NVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEG 179
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
LDY+H G +HR +KA ++L+ DG V ++ + + + G R + K +
Sbjct: 180 LDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVSAFLATGGDVTR--NKVRKTFVGTPC 237
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q ++GYD K+D++S GITA ELA G P+ P ++L+ L P L
Sbjct: 238 WMAPEVMEQ-VRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTL 293
>ref|NP_005100.1| serine/threonine-protein kinase OSR1 [Homo sapiens].
Length = 527
Score = 136 bits (342), Expect = 4e-32
Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 6/237 (2%)
Frame = +3
Query: 216 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFSHP 395
YEL VIG G + V A P E V ++RINLE C M L+ E+ HP
Sbjct: 17 YELQEVIGSGATAV--VQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 396 NILPYRATFIADNELWVVTSFMAYGSAKDLIC------THFMDGMNELAIAYILQGVLKA 557
NI+ Y +F+ +ELW+V ++ GS D+I H ++E IA IL+ VL+
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 558 LDYIHHMGYVHRSVKASHVLISADGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSIKVLP 737
L+Y+H G +HR VKA ++L+ DG V ++ + + + G R + K +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR--NKVRKTFVGTPC 191
Query: 738 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 908
W++PEV++Q ++GYD K+DI+S GITA ELA G P+ P ++L+ L P L
Sbjct: 192 WMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 41,658,912
Number of extensions: 1157802
Number of successful extensions: 4979
Number of sequences better than 1.0e-05: 363
Number of HSP's gapped: 4657
Number of HSP's successfully gapped: 376
Length of query: 350
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 247
Effective length of database: 14,901,872
Effective search space: 3680762384
Effective search space used: 3680762384
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009445
(1050 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 347 8e-93
>Sscrofa_Chr12
|| Length = 63588571
Score = 347 bits (175), Expect = 8e-93
Identities = 175/175 (100%)
Strand = Plus / Plus
Query: 590 caggagtgtcaaagccagccatgttctgatctctgccgatgggaaggtctacctgtccgg 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15207215 caggagtgtcaaagccagccatgttctgatctctgccgatgggaaggtctacctgtccgg 15207274
Query: 650 tttacgcagcaacctcagcatgatcagccacgggcagcggcagcgcgtagtccacgactt 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15207275 tttacgcagcaacctcagcatgatcagccacgggcagcggcagcgcgtagtccacgactt 15207334
Query: 710 tcccaagtacagtatcaaggttctgccttggctcagcccggaggtcctccagcag 764
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15207335 tcccaagtacagtatcaaggttctgccttggctcagcccggaggtcctccagcag 15207389
Score = 250 bits (126), Expect = 1e-63
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 468 ggctctgcaaaggatctcatctgcacacacttcatggacggcatgaacgagctggccatc 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15204753 ggctctgcaaaggatctcatctgcacacacttcatggacggcatgaacgagctggccatc 15204812
Query: 528 gcgtacatcctgcagggggtgctcaaggccctggactacatccaccacatgggatatgtg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15204813 gcgtacatcctgcagggggtgctcaaggccctggactacatccaccacatgggatatgtg 15204872
Query: 588 cacagg 593
||||||
Sbjct: 15204873 cacagg 15204878
Score = 240 bits (121), Expect = 1e-60
Identities = 124/125 (99%)
Strand = Plus / Plus
Query: 236 aggcaaaggattcgaggacctgatgacagtgaacctagcaaggtacaaaccaacaggaga 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15202654 aggcaaaggattcgaggacctgatgacagtgaacctagcaaggtacaaaccaacaggaga 15202713
Query: 296 gtacgtgacggtacgaaggattaacctcgaagcgtgttccaatgagatggtgacgttctt 355
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15202714 gtatgtgacggtacgaaggattaacctcgaagcgtgttccaatgagatggtgacgttctt 15202773
Query: 356 gcagg 360
|||||
Sbjct: 15202774 gcagg 15202778
Score = 222 bits (112), Expect = 3e-55
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 358 agggggagctccatgtctctaaactcttcagccatcccaatatcctgccctatcgagcca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15204532 agggggagctccatgtctctaaactcttcagccatcccaatatcctgccctatcgagcca 15204591
Query: 418 cctttatcgcagacaacgagctgtgggttgtcacatcattcatggcgtatgg 469
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15204592 cctttatcgcagacaacgagctgtgggttgtcacatcattcatggcgtatgg 15204643
Score = 212 bits (107), Expect = 3e-52
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 763 agaatcttcagggttatgatgccaagtccgacatctacagcgtgggaatcacagcctgtg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15207907 agaatcttcagggttatgatgccaagtccgacatctacagcgtgggaatcacagcctgtg 15207966
Query: 823 aactggccaatggccacgtcccctttaaggatatgcctgccacccag 869
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15207967 aactggccaatggccacgtcccctttaaggatatgcctgccacccag 15208013
Score = 208 bits (105), Expect = 5e-51
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 134 gaccaatgaggcgagctcagagtcgatagcatccttctctaaacaggagatcatgagtag 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15201934 gaccaatgaggcgagctcagagtcgatagcatccttctctaaacaggagatcatgagtag 15201993
Query: 194 cttcctgccagagggagggtgttacgagctactcaccgttatagg 238
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15201994 cttcctgccagagggagggtgttacgagctactcaccgttatagg 15202038
Score = 163 bits (82), Expect = 2e-37
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 53 aggtttaaatttttgaaattgaagtaggtcctcacattaggaactcatgtcttttcttgt 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15191648 aggtttaaatttttgaaattgaagtaggtcctcacattaggaactcatgtcttttcttgt 15191707
Query: 113 aagtaaaccagagcgaattagg 134
||||||||||||||||||||||
Sbjct: 15191708 aagtaaaccagagcgaattagg 15191729
Score = 111 bits (56), Expect = 8e-22
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 1 ctaaggaggcggagctgagactgggtcgggactgcttgcttactccaggaccaggt 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15181817 ctaaggaggcggagctgagactgggtcgggactgcttgcttactccaggaccaggt 15181872
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,492,844
Number of extensions: 140
Number of successful extensions: 140
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 140
Number of HSP's successfully gapped: 8
Length of query: 1050
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1029
Effective length of database: 2,808,413,156
Effective search space: 2889857137524
Effective search space used: 2889857137524
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)