Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009493
(911 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001040065.1| regulator of G-protein signaling 4 [Bos taur... 368 e-102
Alignment gi|NP_001029879.1| regulator of G-protein signaling 5 [Bos taur... 176 2e-44
Alignment gi|NP_776875.1| regulator of G-protein signaling 16 [Bos taurus]. 157 2e-38
Alignment gi|XP_002693976.1| PREDICTED: regulator of G-protein signaling ... 150 1e-36
Alignment gi|XP_002701547.1| PREDICTED: regulator of G-protein signaling ... 150 1e-36
Alignment gi|NP_001069064.1| regulator of G-protein signaling 2 [Bos taur... 149 4e-36
Alignment gi|XP_002686857.1| PREDICTED: regulator of G-protein signaling ... 149 4e-36
Alignment gi|XP_873525.2| PREDICTED: regulator of G-protein signaling 2 [... 149 4e-36
Alignment gi|NP_001179900.1| regulator of G-protein signaling 18 [Bos tau... 146 3e-35
Alignment gi|XP_002693977.1| PREDICTED: regulator of G-protein signalling... 146 3e-35
>ref|NP_001040065.1| regulator of G-protein signaling 4 [Bos taurus].
Length = 205
Score = 368 bits (945), Expect = e-102
Identities = 184/205 (89%), Positives = 186/205 (90%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWA 299
MCKGLAGLPASCLRSAKDMKHRLGFLLQ VVICQRVS EEVKKWA
Sbjct: 1 MCKGLAGLPASCLRSAKDMKHRLGFLLQKSDSCEHNSSHSKKDKVVICQRVSHEEVKKWA 60
Query: 300 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFIS 479
ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP+AKKIYNEFIS
Sbjct: 61 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFIS 120
Query: 480 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANL 659
VQATKEVNLDSCTREETSRNMLEPTITCFDEAQ+KIFNLMEKDSYRRFLKSRFYLDL NL
Sbjct: 121 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQRKIFNLMEKDSYRRFLKSRFYLDLVNL 180
Query: 660 SSCGSEKQKGAKSSTDCPSLVPQCA 734
SSCGSEKQKGAKSSTDC SLVPQCA
Sbjct: 181 SSCGSEKQKGAKSSTDCASLVPQCA 205
>ref|NP_001029879.1| regulator of G-protein signaling 5 [Bos taurus].
Length = 181
Score = 176 bits (447), Expect = 2e-44
Identities = 90/176 (51%), Positives = 121/176 (68%), Gaps = 2/176 (1%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXV--VICQRVSQEEVKK 293
MCKGLA LP SCL AK++K +LG LLQ Q+ S +E +
Sbjct: 1 MCKGLAALPHSCLERAKEIKIKLGILLQKPESAIDLVIPYNEKPEKPAKTQKPSLDEALQ 60
Query: 294 WAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEF 473
W +SL+ L+ + GLA+FK+FLKSE+SEEN++FW++CE+YKKIKSP K++ AKKIY EF
Sbjct: 61 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWMACEDYKKIKSPVKMAETAKKIYEEF 120
Query: 474 ISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY 641
I V+A KEVN+D T+E T +N++EP+ + FD AQK+I LMEKDS RF++S FY
Sbjct: 121 IQVEAPKEVNIDHFTKEITVKNLVEPSPSSFDVAQKRIHALMEKDSLPRFVRSEFY 176
>ref|NP_776875.1| regulator of G-protein signaling 16 [Bos taurus].
Length = 202
Score = 157 bits (396), Expect = 2e-38
Identities = 86/188 (45%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQ---EEVK 290
MC+ LA P SCL AK+ K RLG L + + E+V
Sbjct: 1 MCRTLAAFPTSCLERAKEFKTRLGIFLHKSELGSDTGSVGKFEWGSKHSKEGKNFSEDVL 60
Query: 291 KWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNE 470
W ES + L+S + G+AAF AFLK+E+SEEN++FW++CEE+KK++S +KL RA +I+ E
Sbjct: 61 GWKESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKLRSATKLGSRAHRIFEE 120
Query: 471 FISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
FI +A KEVN+D TRE T N+ T CFD AQ K+ LMEKDSY RFLKS Y DL
Sbjct: 121 FICSEAPKEVNIDHETRELTRTNLQAATAVCFDAAQWKVRALMEKDSYPRFLKSPAYRDL 180
Query: 651 ANLSSCGS 674
A ++ S
Sbjct: 181 ATQATAAS 188
>ref|XP_002693976.1| PREDICTED: regulator of G-protein signaling 2-like [Bos taurus].
Length = 152
Score = 150 bits (380), Expect = 1e-36
Identities = 66/134 (49%), Positives = 98/134 (73%)
Frame = +3
Query: 282 EVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKI 461
E W+E+++ L++++ GL AF+ FLKSE+SEEN++FW++CE++KK +S K++ +A+ I
Sbjct: 14 ETVAWSENMDTLLTNQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKIASKARMI 73
Query: 462 YNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY 641
Y+EFI A KE+N+D TR+ S+N+ EPT+ CFDEAQK I++LM DS+ RFLKS Y
Sbjct: 74 YSEFIEADAPKEINIDFSTRDLISKNIAEPTLKCFDEAQKLIYSLMANDSFPRFLKSEIY 133
Query: 642 LDLANLSSCGSEKQ 683
L N GS K+
Sbjct: 134 KKLVNSKEIGSHKK 147
>ref|XP_002701547.1| PREDICTED: regulator of G-protein signaling 2-like [Bos taurus].
Length = 152
Score = 150 bits (380), Expect = 1e-36
Identities = 66/134 (49%), Positives = 98/134 (73%)
Frame = +3
Query: 282 EVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKI 461
E W+E+++ L++++ GL AF+ FLKSE+SEEN++FW++CE++KK +S K++ +A+ I
Sbjct: 14 ETVAWSENMDTLLTNQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKIASKARMI 73
Query: 462 YNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY 641
Y+EFI A KE+N+D TR+ S+N+ EPT+ CFDEAQK I++LM DS+ RFLKS Y
Sbjct: 74 YSEFIEADAPKEINIDFSTRDLISKNIAEPTLKCFDEAQKLIYSLMANDSFPRFLKSEIY 133
Query: 642 LDLANLSSCGSEKQ 683
L N GS K+
Sbjct: 134 KKLVNSKEIGSHKK 147
>ref|NP_001069064.1| regulator of G-protein signaling 2 [Bos taurus].
Length = 211
Score = 149 bits (375), Expect = 4e-36
Identities = 74/161 (45%), Positives = 105/161 (65%)
Frame = +3
Query: 168 KDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAAF 347
KD K RL + LQ + S EE + W+E+ + L++ + GLAAF
Sbjct: 39 KDWKSRLSYFLQNSSSPGKPKTGKKSKQQTFI-KPSPEEAQLWSEAFDELLASKYGLAAF 97
Query: 348 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTREE 527
+AFLKSE+ EENI+FW++CE++KK KSP KLS +AKKIY +FI +A KE+N+D T+
Sbjct: 98 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKAKKIYTDFIEKEAPKEINIDFQTKSL 157
Query: 528 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
++N+ E T CF AQK++++LME +SY RFL+S FY DL
Sbjct: 158 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 198
>ref|XP_002686857.1| PREDICTED: regulator of G-protein signaling 2-like [Bos taurus].
Length = 211
Score = 149 bits (375), Expect = 4e-36
Identities = 74/161 (45%), Positives = 105/161 (65%)
Frame = +3
Query: 168 KDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAAF 347
KD K RL + LQ + S EE + W+E+ + L++ + GLAAF
Sbjct: 39 KDWKSRLSYFLQNSSSPGKPKTGKKSKQQTFI-KPSPEEAQLWSEAFDELLASKYGLAAF 97
Query: 348 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTREE 527
+AFLKSE+ EENI+FW++CE++KK KSP KLS +AKKIY +FI +A KE+N+D T+
Sbjct: 98 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKAKKIYTDFIEKEAPKEINIDFQTKSL 157
Query: 528 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
++N+ E T CF AQK++++LME +SY RFL+S FY DL
Sbjct: 158 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 198
>ref|XP_873525.2| PREDICTED: regulator of G-protein signaling 2 [Bos taurus].
Length = 211
Score = 149 bits (375), Expect = 4e-36
Identities = 74/161 (45%), Positives = 105/161 (65%)
Frame = +3
Query: 168 KDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAAF 347
KD K RL + LQ + S EE + W+E+ + L++ + GLAAF
Sbjct: 39 KDWKSRLSYFLQNSSSPGKPKTGKKSKQQTFI-KPSPEEAQLWSEAFDELLASKYGLAAF 97
Query: 348 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTREE 527
+AFLKSE+ EENI+FW++CE++KK KSP KLS +AKKIY +FI +A KE+N+D T+
Sbjct: 98 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKAKKIYTDFIEKEAPKEINIDFQTKSL 157
Query: 528 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
++N+ E T CF AQK++++LME +SY RFL+S FY DL
Sbjct: 158 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 198
>ref|NP_001179900.1| regulator of G-protein signaling 18 [Bos taurus].
Length = 235
Score = 146 bits (368), Expect = 3e-35
Identities = 69/128 (53%), Positives = 93/128 (72%)
Frame = +3
Query: 267 RVSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP 446
RVS EE KW ES + L+SH+ GL F FLK+E+SEENI+FWI+CE++KK K P ++
Sbjct: 74 RVSPEEAIKWGESFDKLLSHKDGLETFTRFLKTEFSEENIEFWIACEDFKKSKDPQQIIR 133
Query: 447 RAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFL 626
+AK IY +FI A +EVNLD T+E S+++ +PT+ FD AQ +++ LME+DSY RFL
Sbjct: 134 KAKAIYEKFIQNDAPQEVNLDFHTKEIISKSITQPTLQSFDVAQSRVYQLMEQDSYMRFL 193
Query: 627 KSRFYLDL 650
KS YLDL
Sbjct: 194 KSDIYLDL 201
>ref|XP_002693977.1| PREDICTED: regulator of G-protein signalling 18-like [Bos taurus].
Length = 235
Score = 146 bits (368), Expect = 3e-35
Identities = 69/128 (53%), Positives = 93/128 (72%)
Frame = +3
Query: 267 RVSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP 446
RVS EE KW ES + L+SH+ GL F FLK+E+SEENI+FWI+CE++KK K P ++
Sbjct: 74 RVSPEEAIKWGESFDKLLSHKDGLETFTRFLKTEFSEENIEFWIACEDFKKSKDPQQIIR 133
Query: 447 RAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFL 626
+AK IY +FI A +EVNLD T+E S+++ +PT+ FD AQ +++ LME+DSY RFL
Sbjct: 134 KAKAIYEKFIQNDAPQEVNLDFHTKEIISKSITQPTLQSFDVAQSRVYQLMEQDSYMRFL 193
Query: 627 KSRFYLDL 650
KS YLDL
Sbjct: 194 KSDIYLDL 201
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 34,275,675
Number of extensions: 890114
Number of successful extensions: 2718
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 2691
Number of HSP's successfully gapped: 44
Length of query: 303
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 201
Effective length of database: 14,306,398
Effective search space: 2875585998
Effective search space used: 2875585998
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009493
(911 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_545783.2| PREDICTED: similar to Regulator of G-protein si... 360 1e-99
Alignment gi|XP_545784.2| PREDICTED: similar to Regulator of G-protein si... 180 2e-45
Alignment gi|XP_538806.2| PREDICTED: similar to regulator of G-protein si... 171 1e-42
Alignment gi|XP_849550.1| PREDICTED: similar to regulator of G-protein si... 168 6e-42
Alignment gi|XP_859033.1| PREDICTED: similar to Regulator of G-protein si... 168 7e-42
Alignment gi|XP_547431.2| PREDICTED: similar to Regulator of G-protein si... 168 7e-42
Alignment gi|XP_859759.1| PREDICTED: similar to Regulator of G-protein si... 161 9e-40
Alignment gi|XP_849754.1| PREDICTED: similar to regulator of G-protein si... 156 3e-38
Alignment gi|XP_545701.2| PREDICTED: similar to regulator of G-protein si... 147 1e-35
Alignment gi|XP_849782.1| PREDICTED: similar to Regulator of G-protein si... 147 1e-35
>ref|XP_545783.2| PREDICTED: similar to Regulator of G-protein signaling 4 (RGS4)
(RGP4) [Canis familiaris].
Length = 205
Score = 360 bits (924), Expect = 1e-99
Identities = 181/205 (88%), Positives = 184/205 (89%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWA 299
MCKGLAGLPASCLRSAKDMKHRLGFLLQ VV+CQRVSQEEVKKWA
Sbjct: 1 MCKGLAGLPASCLRSAKDMKHRLGFLLQKSDSCEHNSSHSKKDRVVVCQRVSQEEVKKWA 60
Query: 300 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFIS 479
ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP+AKKIYNEFIS
Sbjct: 61 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFIS 120
Query: 480 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANL 659
VQATKEVNLDSCTREETSRNMLEPTITCFDEAQK+IFNLMEKDSYRRFLKSRFYLDLAN
Sbjct: 121 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKRIFNLMEKDSYRRFLKSRFYLDLANS 180
Query: 660 SSCGSEKQKGAKSSTDCPSLVPQCA 734
S GSEKQKGAKSS DCPSLVPQ A
Sbjct: 181 SIAGSEKQKGAKSSADCPSLVPQYA 205
>ref|XP_545784.2| PREDICTED: similar to Regulator of G-protein signaling 5 (RGS5)
isoform 1 [Canis familiaris].
Length = 181
Score = 180 bits (456), Expect = 2e-45
Identities = 88/179 (49%), Positives = 126/179 (70%), Gaps = 2/179 (1%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXV--VICQRVSQEEVKK 293
MCKGLA LP SCL AK++K +LG LLQ Q+ S +E +
Sbjct: 1 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSAVDLVIPYNEKPEKPAKTQKPSLDEALQ 60
Query: 294 WAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEF 473
W +SL+ L+ + GLA+FK+FLKSE+SEEN++FW++CE+YKKIKSP+K++ +AKKIY EF
Sbjct: 61 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWLACEDYKKIKSPTKMAEKAKKIYEEF 120
Query: 474 ISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
I +A KEVN+D T++ T ++++EP+++ FD AQK+I+ LMEKDS RF++S FY +L
Sbjct: 121 IQTEAPKEVNIDHFTKDITMKSLVEPSLSSFDVAQKRIYALMEKDSLPRFVRSEFYQEL 179
>ref|XP_538806.2| PREDICTED: similar to regulator of G-protein signalling 3 isoform 6
[Canis familiaris].
Length = 501
Score = 171 bits (432), Expect = 1e-42
Identities = 85/167 (50%), Positives = 117/167 (70%)
Frame = +3
Query: 156 LRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECG 335
++ AKDMK++LG + + +V + + EE KW ESLE L+ H+ G
Sbjct: 328 MKEAKDMKNKLG-IFRRRNESPGAQPAGKADKMVKSFKPTSEEALKWGESLEKLLLHKYG 386
Query: 336 LAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSC 515
LA F+AFL++E+SEEN++FW++CE++KK+KS SK++ +AKKI+ E+I++QA KEVNLDS
Sbjct: 387 LAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEYIAIQACKEVNLDSY 446
Query: 516 TREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLAN 656
TRE T N+ T CFD AQK+IF LMEKDSY RFL+S YLDL N
Sbjct: 447 TREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLIN 493
>ref|XP_849550.1| PREDICTED: similar to regulator of G-protein signalling 8 isoform 2
[Canis familiaris].
Length = 198
Score = 168 bits (426), Expect = 6e-42
Identities = 82/168 (48%), Positives = 116/168 (69%)
Frame = +3
Query: 159 RSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGL 338
R K M+ RLG L +R+S EE +WA+S + L+SH+ G+
Sbjct: 26 RQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGV 85
Query: 339 AAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCT 518
AAF+AFLK+E+SEEN++FW++CEE+KK +S +KL +A +I+ EF+ VQA +EVN+D T
Sbjct: 86 AAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQT 145
Query: 519 REETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLS 662
RE T +NM EP++TCFD+AQ K+ +LMEKDSY RFL+S+ YLDL + S
Sbjct: 146 REATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQS 193
>ref|XP_859033.1| PREDICTED: similar to Regulator of G-protein signaling 8 (RGS8)
isoform 3 [Canis familiaris].
Length = 180
Score = 168 bits (425), Expect = 7e-42
Identities = 82/168 (48%), Positives = 116/168 (69%)
Frame = +3
Query: 159 RSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGL 338
R K M+ RLG L +R+S EE +WA+S + L+SH+ G+
Sbjct: 8 RRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGV 67
Query: 339 AAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCT 518
AAF+AFLK+E+SEEN++FW++CEE+KK +S +KL +A +I+ EF+ VQA +EVN+D T
Sbjct: 68 AAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQT 127
Query: 519 REETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLS 662
RE T +NM EP++TCFD+AQ K+ +LMEKDSY RFL+S+ YLDL + S
Sbjct: 128 REATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQS 175
>ref|XP_547431.2| PREDICTED: similar to Regulator of G-protein signaling 8 (RGS8)
isoform 1 [Canis familiaris].
Length = 327
Score = 168 bits (425), Expect = 7e-42
Identities = 82/168 (48%), Positives = 116/168 (69%)
Frame = +3
Query: 159 RSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGL 338
R K M+ RLG L +R+S EE +WA+S + L+SH+ G+
Sbjct: 8 RRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGV 67
Query: 339 AAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCT 518
AAF+AFLK+E+SEEN++FW++CEE+KK +S +KL +A +I+ EF+ VQA +EVN+D T
Sbjct: 68 AAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQT 127
Query: 519 REETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLS 662
RE T +NM EP++TCFD+AQ K+ +LMEKDSY RFL+S+ YLDL + S
Sbjct: 128 REATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQS 175
Score = 157 bits (397), Expect = 1e-38
Identities = 79/142 (55%), Positives = 104/142 (73%)
Frame = +3
Query: 264 QRVSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLS 443
+R+S E+V W ES ++L+S + G+AAF AFLK+E+SEEN++FW++CEE+KK++S +KL+
Sbjct: 177 RRLSFEDVLGWKESFDSLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKLRSAAKLA 236
Query: 444 PRAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRF 623
RA KI+ EFI +A KEVN+D TRE T +N+ T TCFD AQ KI LMEKDSY RF
Sbjct: 237 SRAHKIFEEFIRSEAPKEVNIDHETRELTEKNLQAATATCFDVAQGKIRTLMEKDSYPRF 296
Query: 624 LKSRFYLDLANLSSCGSEKQKG 689
LKS Y DLA +S S Q G
Sbjct: 297 LKSPAYRDLAAQASAASASQSG 318
>ref|XP_859759.1| PREDICTED: similar to Regulator of G-protein signaling 5 (RGS5)
isoform 2 [Canis familiaris].
Length = 144
Score = 161 bits (407), Expect = 9e-40
Identities = 80/177 (45%), Positives = 115/177 (64%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWA 299
MCKGLA LP SCL +R S +E +W
Sbjct: 1 MCKGLAALPHSCL-----------------------------------ERPSLDEALQWR 25
Query: 300 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFIS 479
+SL+ L+ + GLA+FK+FLKSE+SEEN++FW++CE+YKKIKSP+K++ +AKKIY EFI
Sbjct: 26 DSLDKLLQNNYGLASFKSFLKSEFSEENLEFWLACEDYKKIKSPTKMAEKAKKIYEEFIQ 85
Query: 480 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
+A KEVN+D T++ T ++++EP+++ FD AQK+I+ LMEKDS RF++S FY +L
Sbjct: 86 TEAPKEVNIDHFTKDITMKSLVEPSLSSFDVAQKRIYALMEKDSLPRFVRSEFYQEL 142
>ref|XP_849754.1| PREDICTED: similar to regulator of G-protein signalling 2, 24kDa
[Canis familiaris].
Length = 222
Score = 156 bits (394), Expect = 3e-38
Identities = 69/141 (48%), Positives = 105/141 (74%)
Frame = +3
Query: 294 WAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEF 473
W+E+++ L++++ GL AF+ FLKSE+SEEN++FW++CE++KK +S K++ +AK IY+EF
Sbjct: 3 WSENMDTLLTNQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKIASKAKMIYSEF 62
Query: 474 ISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLA 653
I A KE+N+D TR+ S+N+ EPT+ CFDEAQK I++LM KDS+ RFLKS Y L
Sbjct: 63 IEADAPKEINIDFSTRDLISKNIAEPTLKCFDEAQKLIYSLMAKDSFPRFLKSEIYKKLV 122
Query: 654 NLSSCGSEKQKGAKSSTDCPS 716
N G+ ++ +K+S + PS
Sbjct: 123 NSKQDGTRQEYKSKNSEENPS 143
>ref|XP_545701.2| PREDICTED: similar to regulator of G-protein signalling 2, 24kDa
[Canis familiaris].
Length = 285
Score = 147 bits (372), Expect = 1e-35
Identities = 74/170 (43%), Positives = 107/170 (62%)
Frame = +3
Query: 168 KDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAAF 347
KD K RL + LQ + S EE + W+E+ + L++ + GLAAF
Sbjct: 113 KDWKTRLSYFLQNSSSPGKPKNGKKSKQQTFI-KPSPEEAQLWSEAFDELLASKYGLAAF 171
Query: 348 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTREE 527
+AFLKSE+ EENI+FW++CE++KK KSP KLS +A+KIY +FI +A KE+N+D T+
Sbjct: 172 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTL 231
Query: 528 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLSSCGSE 677
++N+ E T CF AQK++++LME +SY RFL+S FY DL +E
Sbjct: 232 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCKKPQIATE 281
>ref|XP_849782.1| PREDICTED: similar to Regulator of G-protein signaling 18 (RGS18)
[Canis familiaris].
Length = 235
Score = 147 bits (371), Expect = 1e-35
Identities = 68/128 (53%), Positives = 93/128 (72%)
Frame = +3
Query: 267 RVSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP 446
RVS EE W ES + L+SH+ GL F FLK+E+SEENI+FWI+CEE+K+ K P ++ P
Sbjct: 74 RVSPEEAVIWGESFDKLLSHKDGLETFTRFLKTEFSEENIEFWIACEEFKRSKDPQQIIP 133
Query: 447 RAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFL 626
+AK IY +FI A +EVNLD T+E ++++ +PT+ FD AQ +++ LME+DSY RFL
Sbjct: 134 KAKAIYEKFIQTDAPQEVNLDFHTKEVITKSITQPTLHSFDAAQSRVYQLMEQDSYTRFL 193
Query: 627 KSRFYLDL 650
KS YLDL
Sbjct: 194 KSDIYLDL 201
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 35,667,638
Number of extensions: 916352
Number of successful extensions: 2746
Number of sequences better than 1.0e-05: 34
Number of HSP's gapped: 2715
Number of HSP's successfully gapped: 36
Length of query: 303
Length of database: 18,874,504
Length adjustment: 102
Effective length of query: 201
Effective length of database: 15,474,232
Effective search space: 3110320632
Effective search space used: 3110320632
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009493
(911 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001172113.1| regulator of G-protein signaling 4 [Sus scro... 375 e-104
Alignment gi|NP_999521.1| regulator of G-protein signaling 5 [Sus scrofa]. 179 2e-45
Alignment gi|XP_003357620.1| PREDICTED: regulator of G-protein signaling ... 168 4e-42
Alignment gi|XP_003357619.1| PREDICTED: regulator of G-protein signaling ... 168 4e-42
Alignment gi|NP_001106488.1| regulator of G-protein signaling 16 [Sus scr... 155 3e-38
Alignment gi|XP_003130531.1| PREDICTED: regulator of G-protein signaling ... 150 9e-37
Alignment gi|NP_001038065.1| regulator of G-protein signaling 2 [Sus scro... 148 5e-36
Alignment gi|XP_003357665.1| PREDICTED: regulator of G-protein signaling ... 140 1e-33
Alignment gi|NP_001230822.1| regulator of G-protein signaling 18 [Sus scr... 138 4e-33
Alignment gi|XP_001927312.2| PREDICTED: regulator of G-protein signaling ... 119 2e-27
>ref|NP_001172113.1| regulator of G-protein signaling 4 [Sus scrofa].
Length = 205
Score = 375 bits (963), Expect = e-104
Identities = 188/205 (91%), Positives = 188/205 (91%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWA 299
MCKGLAGLPASCLRSAKDMKHRLGFLLQ VVICQRVSQEEVKKWA
Sbjct: 1 MCKGLAGLPASCLRSAKDMKHRLGFLLQKSDSCEHSSSHSKKDKVVICQRVSQEEVKKWA 60
Query: 300 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFIS 479
ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFIS
Sbjct: 61 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFIS 120
Query: 480 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANL 659
VQ TKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANL
Sbjct: 121 VQQTKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANL 180
Query: 660 SSCGSEKQKGAKSSTDCPSLVPQCA 734
SSCGSEKQKGAKSSTDCPSLVPQCA
Sbjct: 181 SSCGSEKQKGAKSSTDCPSLVPQCA 205
>ref|NP_999521.1| regulator of G-protein signaling 5 [Sus scrofa].
Length = 181
Score = 179 bits (453), Expect = 2e-45
Identities = 90/176 (51%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXX--VVICQRVSQEEVKK 293
MCKGLA LP SCL AK++K +LG LLQ V Q+ S +E +
Sbjct: 1 MCKGLAALPHSCLERAKEIKIKLGILLQKPESAVDLVIPYNEKPDKPVKIQKPSLDEALQ 60
Query: 294 WAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEF 473
W +SL+ L+ + GLA+FK+FLKSE+SEEN++FW++CE+YKKIKSP K++ +AKKIY EF
Sbjct: 61 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWMACEDYKKIKSPVKMAEKAKKIYEEF 120
Query: 474 ISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY 641
I +A KEVN+D T+E T +N++EP+ + FD AQK+I+ LMEKDS RF++S FY
Sbjct: 121 IQSEAPKEVNIDHFTKEITMKNLVEPSPSSFDVAQKRIYALMEKDSLPRFVRSEFY 176
>ref|XP_003357620.1| PREDICTED: regulator of G-protein signaling 8-like isoform 2 [Sus
scrofa].
Length = 180
Score = 168 bits (425), Expect = 4e-42
Identities = 82/168 (48%), Positives = 116/168 (69%)
Frame = +3
Query: 159 RSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGL 338
R K M+ RLG L +R+S EE +WA+S + L+SH+ G+
Sbjct: 8 RRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGV 67
Query: 339 AAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCT 518
AAF+AFLK+E+SEEN++FW++CEE+KK +S +KL +A +I+ EF+ VQA +EVN+D T
Sbjct: 68 AAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQT 127
Query: 519 REETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLS 662
RE T +NM EP++TCFD+AQ K+ +LMEKDSY RFL+S+ YLDL + S
Sbjct: 128 REATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQS 175
>ref|XP_003357619.1| PREDICTED: regulator of G-protein signaling 8-like isoform 1 [Sus
scrofa].
Length = 180
Score = 168 bits (425), Expect = 4e-42
Identities = 82/168 (48%), Positives = 116/168 (69%)
Frame = +3
Query: 159 RSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGL 338
R K M+ RLG L +R+S EE +WA+S + L+SH+ G+
Sbjct: 8 RRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGV 67
Query: 339 AAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCT 518
AAF+AFLK+E+SEEN++FW++CEE+KK +S +KL +A +I+ EF+ VQA +EVN+D T
Sbjct: 68 AAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQT 127
Query: 519 REETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLS 662
RE T +NM EP++TCFD+AQ K+ +LMEKDSY RFL+S+ YLDL + S
Sbjct: 128 REATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQS 175
>ref|NP_001106488.1| regulator of G-protein signaling 16 [Sus scrofa].
Length = 202
Score = 155 bits (392), Expect = 3e-38
Identities = 89/202 (44%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQ---EEVK 290
MC+ LA P +CL AK+ K RLG L + + E+V
Sbjct: 1 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGSDPASVGKFEWGSKHSKDGRNFSEDVL 60
Query: 291 KWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNE 470
W ES + L+S + G+AAF FLK+E+SEEN++FW++CEE+KK++S +KL+ RA +I+ E
Sbjct: 61 GWRESFDLLLSSKNGVAAFHTFLKTEFSEENLEFWLACEEFKKLRSATKLASRAHRIFEE 120
Query: 471 FISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
FI +A KEVNLD TRE T N+ + TCFD AQ K LMEKDSY RFLKS Y DL
Sbjct: 121 FIRSEAPKEVNLDHETRELTRTNLQAASATCFDVAQGKTRTLMEKDSYPRFLKSPAYRDL 180
Query: 651 ANLSSCGSEKQKGAKSSTDCPS 716
A +S S A +S+ P+
Sbjct: 181 AAQASAAS-----ASASSSSPA 197
>ref|XP_003130531.1| PREDICTED: regulator of G-protein signaling 21-like [Sus scrofa].
Length = 152
Score = 150 bits (379), Expect = 9e-37
Identities = 68/134 (50%), Positives = 98/134 (73%)
Frame = +3
Query: 282 EVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKI 461
E W+E+++ L+S++ GL AF+ FLKSE+SEEN++FW++CE++KK +S KL +AK I
Sbjct: 14 ETMAWSENMDTLLSNQAGLDAFRTFLKSEFSEENVEFWLACEDFKKTESAEKLVSKAKVI 73
Query: 462 YNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY 641
Y+EFI A KE+N+D TR+ S+N+ EPT CFDEAQK I++LM KDS+ RFLKS Y
Sbjct: 74 YSEFIEADAPKEINIDFSTRDLISKNIAEPTRKCFDEAQKLIYSLMAKDSFPRFLKSEIY 133
Query: 642 LDLANLSSCGSEKQ 683
+L + G+ K+
Sbjct: 134 KELVHSRQVGNHKK 147
>ref|NP_001038065.1| regulator of G-protein signaling 2 [Sus scrofa].
Length = 212
Score = 148 bits (373), Expect = 5e-36
Identities = 74/161 (45%), Positives = 105/161 (65%)
Frame = +3
Query: 168 KDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAAF 347
KD K RL + LQ + S EE + WAE+ + L++ + GLAAF
Sbjct: 39 KDWKTRLSYFLQNSSSPGKPKTGKKSKPQTFI-KPSPEEAQLWAEAFDELLASKYGLAAF 97
Query: 348 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTREE 527
+AFLKSE+ EENI+FW++CE++KK KSP KLS +A+KIY +FI +A KE+N+D T+
Sbjct: 98 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKTL 157
Query: 528 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
++N+ E T CF AQK++++LME +SY RFL+S FY DL
Sbjct: 158 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 198
>ref|XP_003357665.1| PREDICTED: regulator of G-protein signaling 1 [Sus scrofa].
Length = 209
Score = 140 bits (352), Expect = 1e-33
Identities = 68/129 (52%), Positives = 94/129 (72%)
Frame = +3
Query: 270 VSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPR 449
+S +EV +W++SLE L++++ G F FLKSE+SEENI+FW++CE+YKK +S L +
Sbjct: 74 LSADEVMQWSQSLEKLLANQTGQDVFGNFLKSEFSEENIEFWLACEDYKKTES-DLLHRK 132
Query: 450 AKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLK 629
A++IY F+ A K++N+D TRE T+R + T TCFDEAQK I+ LMEKDSY RFLK
Sbjct: 133 AEQIYKAFVQSDAAKQINIDFHTREATARKIKAATPTCFDEAQKIIYTLMEKDSYPRFLK 192
Query: 630 SRFYLDLAN 656
S YL+L N
Sbjct: 193 SNIYLNLLN 201
>ref|NP_001230822.1| regulator of G-protein signaling 18 [Sus scrofa].
Length = 235
Score = 138 bits (348), Expect = 4e-33
Identities = 65/128 (50%), Positives = 89/128 (69%)
Frame = +3
Query: 267 RVSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP 446
R+S EE W ES + L+S + GL F FLK+E+S+ENI FWI+CE+YKK K P ++
Sbjct: 74 RISPEEAMIWGESFDKLLSQKDGLETFTRFLKTEFSDENIAFWIACEDYKKSKDPQQIIR 133
Query: 447 RAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFL 626
+AK IY FI A +EVNLD T+E ++++ +PT+ FD AQ +++ LME+DSY RFL
Sbjct: 134 KAKAIYETFIQTDAPQEVNLDFHTKEILAKSITQPTLHSFDAAQSRVYQLMEQDSYTRFL 193
Query: 627 KSRFYLDL 650
KS YLDL
Sbjct: 194 KSDIYLDL 201
>ref|XP_001927312.2| PREDICTED: regulator of G-protein signaling 20-like [Sus scrofa].
Length = 242
Score = 119 bits (299), Expect = 2e-27
Identities = 59/124 (47%), Positives = 82/124 (66%)
Frame = +3
Query: 279 EEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKK 458
EE WA S E L+ G AF+ FL++E+SEEN+ FW++CEE KK + + + +A+
Sbjct: 108 EEASAWARSFEQLMLTAAGRNAFREFLRTEFSEENLLFWMACEELKKEANKTIIEEKARI 167
Query: 459 IYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRF 638
IY ++IS+ + KEV+LDS RE RNM EP+ FD+AQ +I+ LM +DSY RFL S
Sbjct: 168 IYEDYISILSPKEVSLDSRVRELIDRNMAEPSPHIFDDAQLQIYTLMHRDSYPRFLSSTL 227
Query: 639 YLDL 650
Y DL
Sbjct: 228 YKDL 231
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 22,010,617
Number of extensions: 569817
Number of successful extensions: 1693
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 1679
Number of HSP's successfully gapped: 20
Length of query: 303
Length of database: 11,343,932
Length adjustment: 98
Effective length of query: 205
Effective length of database: 8,904,026
Effective search space: 1825325330
Effective search space used: 1825325330
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009493
(911 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033088.2| regulator of G-protein signaling 4 [Mus musculu... 357 5e-99
Alignment gi|NP_033089.2| regulator of G-protein signaling 5 [Mus musculu... 175 4e-44
Alignment gi|NP_080656.2| regulator of G-protein signaling 8 [Mus musculu... 169 3e-42
Alignment gi|NP_599018.3| regulator of G-protein signaling 3 isoform 2 [M... 165 5e-41
Alignment gi|NP_035397.2| regulator of G-protein signaling 16 [Mus muscul... 154 9e-38
Alignment gi|XP_894544.3| PREDICTED: regulator of G-protein signaling 21-... 150 1e-36
Alignment gi|XP_921002.3| PREDICTED: regulator of G-protein signaling 21-... 150 1e-36
Alignment gi|NP_033087.2| regulator of G-protein signaling 2 [Mus musculu... 148 5e-36
Alignment gi|NP_075019.1| regulator of G-protein signaling 18 [Mus muscul... 145 4e-35
Alignment gi|NP_056626.2| regulator of G-protein signaling 1 [Mus musculu... 139 4e-33
>ref|NP_033088.2| regulator of G-protein signaling 4 [Mus musculus].
Length = 205
Score = 357 bits (917), Expect = 5e-99
Identities = 179/205 (87%), Positives = 182/205 (88%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWA 299
MCKGLAGLPASCLRSAKDMKHRLGFLLQ VV CQRVSQEEVKKWA
Sbjct: 1 MCKGLAGLPASCLRSAKDMKHRLGFLLQKSDSCEHSSSHSKKDKVVTCQRVSQEEVKKWA 60
Query: 300 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFIS 479
ESLENLI HECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP+AKKIYNEFIS
Sbjct: 61 ESLENLIHHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFIS 120
Query: 480 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANL 659
VQATKEVNLDSCTREETSRNML+PTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL N
Sbjct: 121 VQATKEVNLDSCTREETSRNMLQPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLTNP 180
Query: 660 SSCGSEKQKGAKSSTDCPSLVPQCA 734
SSCG+EKQKGAKSS DC SLV QCA
Sbjct: 181 SSCGAEKQKGAKSSADCTSLVSQCA 205
>ref|NP_033089.2| regulator of G-protein signaling 5 [Mus musculus].
Length = 181
Score = 175 bits (444), Expect = 4e-44
Identities = 88/179 (49%), Positives = 121/179 (67%), Gaps = 2/179 (1%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXV--VICQRVSQEEVKK 293
MCKGLA LP SCL AK++K +LG LLQ + S EEV +
Sbjct: 1 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSAVDLVIPYNEKPEKPAKAHKPSLEEVLQ 60
Query: 294 WAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEF 473
W +SL+ L+ + G A+FK+FLKSE+SEEN++FW++CE YKKIKSP K++ +AK+IY EF
Sbjct: 61 WRQSLDKLLQNSYGFASFKSFLKSEFSEENLEFWVACENYKKIKSPIKMAEKAKQIYEEF 120
Query: 474 ISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
I +A KEVN+D T++ T +N++EP+ FD AQK+I+ LMEKDS RF++S FY +L
Sbjct: 121 IQTEAPKEVNIDHFTKDITMKNLVEPSPRSFDLAQKRIYALMEKDSLPRFVRSEFYKEL 179
>ref|NP_080656.2| regulator of G-protein signaling 8 [Mus musculus].
Length = 180
Score = 169 bits (428), Expect = 3e-42
Identities = 83/168 (49%), Positives = 116/168 (69%)
Frame = +3
Query: 159 RSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGL 338
R K M+ RLG L +R+S EE +WAES + L+SH+ G+
Sbjct: 8 RRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWAESFDVLLSHKYGV 67
Query: 339 AAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCT 518
AAF+AFLK+E+SEEN++FW++CEE+KK +S +KL +A +I+ EF+ VQA +EVN+D T
Sbjct: 68 AAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVTKAHRIFEEFVDVQAPREVNIDFQT 127
Query: 519 REETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLS 662
RE T +NM EP++TCFD+AQ K+ +LMEKDSY RFL+S+ YLDL + S
Sbjct: 128 REATRKNMQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQS 175
>ref|NP_599018.3| regulator of G-protein signaling 3 isoform 2 [Mus musculus].
Length = 966
Score = 165 bits (417), Expect = 5e-41
Identities = 77/128 (60%), Positives = 101/128 (78%)
Frame = +3
Query: 273 SQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRA 452
+ EE KW+ESLE L+ H+ GL F+AFL++E+SEEN++FW++CE++KK+KS SK++ +A
Sbjct: 831 TSEEALKWSESLEKLLLHKYGLEVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKA 890
Query: 453 KKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKS 632
KKI+ EFI++QA KEVNLDS TRE T N+ T CFD AQK+IF LMEKDSY RFL+S
Sbjct: 891 KKIFAEFIAIQACKEVNLDSYTREHTKENLQSITRGCFDLAQKRIFGLMEKDSYPRFLRS 950
Query: 633 RFYLDLAN 656
YLDL N
Sbjct: 951 DLYLDLIN 958
>ref|NP_035397.2| regulator of G-protein signaling 16 [Mus musculus].
Length = 201
Score = 154 bits (389), Expect = 9e-38
Identities = 86/187 (45%), Positives = 114/187 (60%), Gaps = 2/187 (1%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVIC--QRVSQEEVKK 293
MC+ LA P +CL AK+ K RLG L +R E+V
Sbjct: 1 MCRTLATFPNTCLERAKEFKTRLGIFLHKSELSSDTGGISKFEWASKHNKERSFSEDVLG 60
Query: 294 WAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEF 473
W ES + L++ + G+AAF AFLK+E+SEEN++FW++CEE+KKI+S +KL+ RA I++E+
Sbjct: 61 WRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEY 120
Query: 474 ISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLA 653
I +A KEVN+D TRE T N+ T +CFD AQ K LMEKDSY RFLKS Y DLA
Sbjct: 121 IRSEAPKEVNIDHETRELTKTNLQAATTSCFDVAQGKTRTLMEKDSYPRFLKSPAYRDLA 180
Query: 654 NLSSCGS 674
+S S
Sbjct: 181 AQASATS 187
>ref|XP_894544.3| PREDICTED: regulator of G-protein signaling 21-like [Mus musculus].
Length = 152
Score = 150 bits (380), Expect = 1e-36
Identities = 68/134 (50%), Positives = 98/134 (73%)
Frame = +3
Query: 282 EVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKI 461
E W+E++++L++++ GL AF+ FLKSEYSEEN++FW++CE++KK + K++ +AK I
Sbjct: 14 ETLAWSENMDSLLANQAGLDAFRTFLKSEYSEENVEFWLACEDFKKTECREKIATKAKTI 73
Query: 462 YNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY 641
Y+EFI A KE+N+D TR+ SRN+ EPT CFDEAQK I++LM KDS+ RFLKS Y
Sbjct: 74 YSEFIVADAPKEINIDFSTRDLISRNIAEPTPKCFDEAQKLIYSLMAKDSFPRFLKSEIY 133
Query: 642 LDLANLSSCGSEKQ 683
L N G+ K+
Sbjct: 134 KKLVNSQQVGNHKR 147
>ref|XP_921002.3| PREDICTED: regulator of G-protein signaling 21-like [Mus musculus].
Length = 152
Score = 150 bits (380), Expect = 1e-36
Identities = 68/134 (50%), Positives = 98/134 (73%)
Frame = +3
Query: 282 EVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKI 461
E W+E++++L++++ GL AF+ FLKSEYSEEN++FW++CE++KK + K++ +AK I
Sbjct: 14 ETLAWSENMDSLLANQAGLDAFRTFLKSEYSEENVEFWLACEDFKKTECREKIATKAKTI 73
Query: 462 YNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY 641
Y+EFI A KE+N+D TR+ SRN+ EPT CFDEAQK I++LM KDS+ RFLKS Y
Sbjct: 74 YSEFIVADAPKEINIDFSTRDLISRNIAEPTPKCFDEAQKLIYSLMAKDSFPRFLKSEIY 133
Query: 642 LDLANLSSCGSEKQ 683
L N G+ K+
Sbjct: 134 KKLVNSQQVGNHKR 147
>ref|NP_033087.2| regulator of G-protein signaling 2 [Mus musculus].
Length = 211
Score = 148 bits (374), Expect = 5e-36
Identities = 74/161 (45%), Positives = 105/161 (65%)
Frame = +3
Query: 168 KDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAAF 347
KD K RL + LQ + S EE + WAE+ + L++ + GLAAF
Sbjct: 39 KDWKTRLSYFLQNSSAPGKPKTGKKSKQQTFI-KPSPEEAQLWAEAFDELLASKYGLAAF 97
Query: 348 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTREE 527
+AFLKSE+ EENI+FW++CE++KK KSP KLS +A+KIY +FI +A KE+N+D T+
Sbjct: 98 RAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQTKSL 157
Query: 528 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
++N+ E T CF AQK++++LME +SY RFL+S FY DL
Sbjct: 158 IAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDL 198
>ref|NP_075019.1| regulator of G-protein signaling 18 [Mus musculus].
Length = 235
Score = 145 bits (366), Expect = 4e-35
Identities = 74/162 (45%), Positives = 103/162 (63%)
Frame = +3
Query: 165 AKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAA 344
AK+ ++RL LLQ RVS EE KWAES + L+SH G+ A
Sbjct: 41 AKEKRNRLSLLLQRPDFHGETQASRSALLAKET-RVSPEEAVKWAESFDKLLSHRDGVDA 99
Query: 345 FKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTRE 524
F FLK+E+SEENI+FW++CE++KK K P ++ +AK IY +FI A KEVN+D T+E
Sbjct: 100 FTRFLKTEFSEENIEFWVACEDFKKCKEPQQIILKAKAIYEKFIQNDAPKEVNIDFHTKE 159
Query: 525 ETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
++++ +PT+ FD AQ +++ LME DSY+RFLKS YL L
Sbjct: 160 VIAKSIAQPTLHSFDTAQSRVYQLMEHDSYKRFLKSETYLHL 201
>ref|NP_056626.2| regulator of G-protein signaling 1 [Mus musculus].
Length = 209
Score = 139 bits (349), Expect = 4e-33
Identities = 67/129 (51%), Positives = 94/129 (72%)
Frame = +3
Query: 270 VSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPR 449
+S EEV +W++SLE L++++ G F FLKSE+SEENI+FW++CE+YKK ++ L +
Sbjct: 74 LSAEEVMQWSQSLEKLLANQTGQNVFGRFLKSEFSEENIEFWLACEDYKKTET-DLLHNK 132
Query: 450 AKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLK 629
A+ IY F+ A K++N+D TRE T++ + PT T FDEAQK I++LMEKDSY RFLK
Sbjct: 133 AENIYKAFVHSDAVKQINIDFHTRESTAKKIKTPTPTSFDEAQKVIYSLMEKDSYPRFLK 192
Query: 630 SRFYLDLAN 656
S YL+L N
Sbjct: 193 SNIYLNLLN 201
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 29,965,852
Number of extensions: 769360
Number of successful extensions: 2335
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 2308
Number of HSP's successfully gapped: 29
Length of query: 303
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 202
Effective length of database: 12,583,923
Effective search space: 2541952446
Effective search space used: 2541952446
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009493
(911 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001095915.1| regulator of G-protein signaling 4 isoform 1... 369 e-110
Alignment gi|NP_005604.1| regulator of G-protein signaling 4 isoform 2 [H... 365 e-101
Alignment gi|NP_001106851.1| regulator of G-protein signaling 4 isoform 3... 329 2e-90
Alignment gi|NP_003608.1| regulator of G-protein signaling 5 isoform 1 [H... 180 1e-45
Alignment gi|NP_652760.2| regulator of G-protein signaling 3 isoform 5 [H... 169 2e-42
Alignment gi|NP_652759.3| regulator of G-protein signaling 3 isoform 6 [H... 168 7e-42
Alignment gi|NP_066929.1| regulator of G-protein signaling 3 isoform 2 [H... 168 7e-42
Alignment gi|NP_570613.2| regulator of G-protein signaling 3 isoform 1 [H... 168 7e-42
Alignment gi|NP_203131.1| regulator of G-protein signaling 8 isoform 1 [H... 167 1e-41
Alignment gi|NP_001095920.1| regulator of G-protein signaling 8 isoform 2... 167 2e-41
>ref|NP_001095915.1| regulator of G-protein signaling 4 isoform 1 [Homo sapiens].
Length = 302
Score = 369 bits (948), Expect(2) = e-110
Identities = 185/208 (88%), Positives = 188/208 (90%)
Frame = +3
Query: 111 LHKMCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVK 290
L+KMCKGLAGLPASCLRSAKDMKHRLGFLLQ VVICQRVSQEEVK
Sbjct: 95 LNKMCKGLAGLPASCLRSAKDMKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVK 154
Query: 291 KWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNE 470
KWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP+AKKIYNE
Sbjct: 155 KWAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNE 214
Query: 471 FISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
FISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL
Sbjct: 215 FISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 274
Query: 651 ANLSSCGSEKQKGAKSSTDCPSLVPQCA 734
N SSCG+EKQKGAKSS DC SLVPQCA
Sbjct: 275 VNPSSCGAEKQKGAKSSADCASLVPQCA 302
Score = 48.9 bits (115), Expect(2) = e-110
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 1 RSSEDSDSSFPGEKAKCAQNRSHSSSCCISFL 96
R SEDSD+ F GE+AK AQ+RSHSSSC ISFL
Sbjct: 57 RRSEDSDNIFTGEEAKYAQSRSHSSSCRISFL 88
>ref|NP_005604.1| regulator of G-protein signaling 4 isoform 2 [Homo sapiens].
Length = 205
Score = 365 bits (938), Expect = e-101
Identities = 183/205 (89%), Positives = 185/205 (90%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWA 299
MCKGLAGLPASCLRSAKDMKHRLGFLLQ VVICQRVSQEEVKKWA
Sbjct: 1 MCKGLAGLPASCLRSAKDMKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWA 60
Query: 300 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFIS 479
ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP+AKKIYNEFIS
Sbjct: 61 ESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFIS 120
Query: 480 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANL 659
VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL N
Sbjct: 121 VQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLVNP 180
Query: 660 SSCGSEKQKGAKSSTDCPSLVPQCA 734
SSCG+EKQKGAKSS DC SLVPQCA
Sbjct: 181 SSCGAEKQKGAKSSADCASLVPQCA 205
>ref|NP_001106851.1| regulator of G-protein signaling 4 isoform 3 [Homo sapiens].
Length = 187
Score = 329 bits (843), Expect = 2e-90
Identities = 165/187 (88%), Positives = 167/187 (89%)
Frame = +3
Query: 174 MKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAAFKA 353
MKHRLGFLLQ VVICQRVSQEEVKKWAESLENLISHECGLAAFKA
Sbjct: 1 MKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAFKA 60
Query: 354 FLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTREETS 533
FLKSEYSEENIDFWISCEEYKKIKSPSKLSP+AKKIYNEFISVQATKEVNLDSCTREETS
Sbjct: 61 FLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETS 120
Query: 534 RNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLSSCGSEKQKGAKSSTDCP 713
RNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL N SSCG+EKQKGAKSS DC
Sbjct: 121 RNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLVNPSSCGAEKQKGAKSSADCA 180
Query: 714 SLVPQCA 734
SLVPQCA
Sbjct: 181 SLVPQCA 187
>ref|NP_003608.1| regulator of G-protein signaling 5 isoform 1 [Homo sapiens].
Length = 181
Score = 180 bits (457), Expect = 1e-45
Identities = 89/179 (49%), Positives = 125/179 (69%), Gaps = 2/179 (1%)
Frame = +3
Query: 120 MCKGLAGLPASCLRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXV--VICQRVSQEEVKK 293
MCKGLA LP SCL AK++K +LG LLQ Q+ S +E +
Sbjct: 1 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQ 60
Query: 294 WAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEF 473
W +SL+ L+ + GLA+FK+FLKSE+SEEN++FWI+CE+YKKIKSP+K++ +AK+IY EF
Sbjct: 61 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEF 120
Query: 474 ISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDL 650
I +A KEVN+D T++ T +N++EP+++ FD AQK+I LMEKDS RF++S FY +L
Sbjct: 121 IQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQEL 179
>ref|NP_652760.2| regulator of G-protein signaling 3 isoform 5 [Homo sapiens].
Length = 311
Score = 169 bits (429), Expect = 2e-42
Identities = 84/167 (50%), Positives = 117/167 (70%)
Frame = +3
Query: 156 LRSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECG 335
++ AKDMK++LG + + ++ + + EE KW ESLE L+ H+ G
Sbjct: 138 MKEAKDMKNKLG-IFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYG 196
Query: 336 LAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSC 515
LA F+AFL++E+SEEN++FW++CE++KK+KS SK++ +AKKI+ E+I++QA KEVNLDS
Sbjct: 197 LAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSY 256
Query: 516 TREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLAN 656
TRE T N+ T CFD AQK+IF LMEKDSY RFL+S YLDL N
Sbjct: 257 TREHTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLIN 303
>ref|NP_652759.3| regulator of G-protein signaling 3 isoform 6 [Homo sapiens].
Length = 1198
Score = 168 bits (425), Expect = 7e-42
Identities = 84/164 (51%), Positives = 115/164 (70%)
Frame = +3
Query: 165 AKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAA 344
AKDMK++LG + + ++ + + EE KW ESLE L+ H+ GLA
Sbjct: 1028 AKDMKNKLG-IFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAV 1086
Query: 345 FKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTRE 524
F+AFL++E+SEEN++FW++CE++KK+KS SK++ +AKKI+ E+I++QA KEVNLDS TRE
Sbjct: 1087 FQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTRE 1146
Query: 525 ETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLAN 656
T N+ T CFD AQK+IF LMEKDSY RFL+S YLDL N
Sbjct: 1147 HTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLIN 1190
>ref|NP_066929.1| regulator of G-protein signaling 3 isoform 2 [Homo sapiens].
Length = 519
Score = 168 bits (425), Expect = 7e-42
Identities = 84/164 (51%), Positives = 115/164 (70%)
Frame = +3
Query: 165 AKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAA 344
AKDMK++LG + + ++ + + EE KW ESLE L+ H+ GLA
Sbjct: 349 AKDMKNKLG-IFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAV 407
Query: 345 FKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTRE 524
F+AFL++E+SEEN++FW++CE++KK+KS SK++ +AKKI+ E+I++QA KEVNLDS TRE
Sbjct: 408 FQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTRE 467
Query: 525 ETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLAN 656
T N+ T CFD AQK+IF LMEKDSY RFL+S YLDL N
Sbjct: 468 HTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLIN 511
>ref|NP_570613.2| regulator of G-protein signaling 3 isoform 1 [Homo sapiens].
Length = 917
Score = 168 bits (425), Expect = 7e-42
Identities = 84/164 (51%), Positives = 115/164 (70%)
Frame = +3
Query: 165 AKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGLAA 344
AKDMK++LG + + ++ + + EE KW ESLE L+ H+ GLA
Sbjct: 747 AKDMKNKLG-IFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAV 805
Query: 345 FKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCTRE 524
F+AFL++E+SEEN++FW++CE++KK+KS SK++ +AKKI+ E+I++QA KEVNLDS TRE
Sbjct: 806 FQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTRE 865
Query: 525 ETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLAN 656
T N+ T CFD AQK+IF LMEKDSY RFL+S YLDL N
Sbjct: 866 HTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLIN 909
>ref|NP_203131.1| regulator of G-protein signaling 8 isoform 1 [Homo sapiens].
Length = 198
Score = 167 bits (423), Expect = 1e-41
Identities = 81/168 (48%), Positives = 116/168 (69%)
Frame = +3
Query: 159 RSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGL 338
R K M+ RLG L +R+S EE +WA+S + L+SH+ G+
Sbjct: 26 RQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGV 85
Query: 339 AAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCT 518
AAF+AFLK+E+SEEN++FW++CEE+KK +S +KL +A +I+ EF+ VQA +EVN+D T
Sbjct: 86 AAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQT 145
Query: 519 REETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLS 662
RE T +N+ EP++TCFD+AQ K+ +LMEKDSY RFL+S+ YLDL + S
Sbjct: 146 REATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQS 193
>ref|NP_001095920.1| regulator of G-protein signaling 8 isoform 2 [Homo sapiens].
Length = 180
Score = 167 bits (422), Expect = 2e-41
Identities = 81/168 (48%), Positives = 116/168 (69%)
Frame = +3
Query: 159 RSAKDMKHRLGFLLQXXXXXXXXXXXXXXXXVVICQRVSQEEVKKWAESLENLISHECGL 338
R K M+ RLG L +R+S EE +WA+S + L+SH+ G+
Sbjct: 8 RRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGV 67
Query: 339 AAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPRAKKIYNEFISVQATKEVNLDSCT 518
AAF+AFLK+E+SEEN++FW++CEE+KK +S +KL +A +I+ EF+ VQA +EVN+D T
Sbjct: 68 AAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQT 127
Query: 519 REETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLANLS 662
RE T +N+ EP++TCFD+AQ K+ +LMEKDSY RFL+S+ YLDL + S
Sbjct: 128 REATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQS 175
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 35,171,182
Number of extensions: 908139
Number of successful extensions: 2549
Number of sequences better than 1.0e-05: 50
Number of HSP's gapped: 2514
Number of HSP's successfully gapped: 52
Length of query: 303
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 201
Effective length of database: 14,934,836
Effective search space: 3001902036
Effective search space used: 3001902036
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009493
(911 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr04 803 0.0
>Sscrofa_Chr04
|| Length = 143465943
Score = 803 bits (405), Expect = 0.0
Identities = 415/417 (99%), Gaps = 1/417 (0%)
Strand = Plus / Minus
Query: 496 aggtaaacctggattcttgcaccagggaggagacaagccggaacatgctggagcccacga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95098612 aggtaaacctggattcttgcaccagggaggagacaagccggaacatgctggagcccacga 95098553
Query: 556 taacctgttttgacgaggctcagaagaagattttcaacctgatggaaaaggattcctatc 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95098552 taacctgttttgacgaggctcagaagaagattttcaacctgatggaaaaggattcctatc 95098493
Query: 616 gccgcttcctcaaatcccgattctaccttgatttggccaacctttccagctgtgggtcag 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95098492 gccgcttcctcaaatcccgattctaccttgatttggccaacctttccagctgtgggtcag 95098433
Query: 676 agaagcagaaaggagccaagagttctacagactgtccttccctggtcccccagtgtgcct 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95098432 agaagcagaaaggagccaagagttctacagactgtccttccctggtcccccagtgtgcct 95098373
Query: 736 agttacggctcagcagtggagggcggaaatgccaagactctacacctggaaaacctgagg 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95098372 agttacggctcagcagtggagggcggaaatgccaagactctacacctggaaaacctgagg 95098313
Query: 796 ccacgtattgatctgtattaagcaccagtcctttctccacattgtagcctagtgttcatg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95098312 ccacgtattgatctgtattaagcaccagtcctttctccacattgtagcctagtgttcatg 95098253
Query: 856 ctgctggctatgtgtgagtcactcccat-aagaaactagatttagttttgggtattt 911
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 95098252 ctgctggctatgtgtgagtcactcccataaagaaactagatttagttttggttattt 95098196
Score = 323 bits (163), Expect = 1e-85
Identities = 163/163 (100%)
Strand = Plus / Minus
Query: 1 agaagctcagaggattctgacagtagctttccgggagaaaaggcaaagtgcgctcaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95103332 agaagctcagaggattctgacagtagctttccgggagaaaaggcaaagtgcgctcaaaac 95103273
Query: 61 agaagccacagctcctcctgctgcatttctttcctaacgtgaatcccacacttcacaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95103272 agaagccacagctcctcctgctgcatttctttcctaacgtgaatcccacacttcacaaga 95103213
Query: 121 tgtgcaaaggactcgcaggtctgccggcttcttgcttgaggag 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95103212 tgtgcaaaggactcgcaggtctgccggcttcttgcttgaggag 95103170
Score = 321 bits (162), Expect = 4e-85
Identities = 168/170 (98%)
Strand = Plus / Minus
Query: 331 gtgggctggcagctttcaaagctttcctgaagtctgaatacagtgaggaaaacattgact 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95099194 gtgggctggcagctttcaaagctttcctgaagtctgaatacagtgaggaaaacattgact 95099135
Query: 391 tctggatcagctgtgaagagtacaagaaaatcaaatcaccctcaaaactaagtcccaggg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95099134 tctggatcagctgtgaagagtacaagaaaatcaaatcaccctcaaaactaagtcccaggg 95099075
Query: 451 ccaaaaagatctacaatgaattcatctccgtccaggcaaccaaagaggta 500
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 95099074 ccaaaaagatctacaatgaattcatctccgtccagcaaaccaaagaggta 95099025
Score = 214 bits (108), Expect = 6e-53
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 162 agtgcaaaagatatgaaacatcggctaggttttctgctgcagaagtctgattcctgtgaa 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95100287 agtgcaaaagatatgaaacatcggctaggttttctgctgcagaagtctgattcctgtgaa 95100228
Query: 222 catagttcttctcacagcaagaaggacaaagtggtgatttgtcagagg 269
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95100227 catagttcttctcacagcaagaaggacaaagtggtgatttgtcagagg 95100180
Score = 131 bits (66), Expect = 7e-28
Identities = 66/66 (100%)
Strand = Plus / Minus
Query: 267 agggtgagccaagaggaagtcaaaaaatgggctgaatccctggaaaacctgattagtcat 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95099871 agggtgagccaagaggaagtcaaaaaatgggctgaatccctggaaaacctgattagtcat 95099812
Query: 327 gaatgt 332
||||||
Sbjct: 95099811 gaatgt 95099806
Score = 71.9 bits (36), Expect = 6e-10
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 353 tttcctgaagtctgaatacagtgaggaaaacattgacttctggatcagctgtgaagagta 412
||||||||||||||||| ||||||||||||| |||| |||||||| |||||| || ||
Sbjct: 95047325 tttcctgaagtctgaattcagtgaggaaaaccttgagttctggatggcctgtgaggacta 95047384
Query: 413 caagaaaatcaa 424
|||||| |||||
Sbjct: 95047385 caagaagatcaa 95047396
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 31,053,323
Number of extensions: 205
Number of successful extensions: 205
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 204
Number of HSP's successfully gapped: 6
Length of query: 911
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 890
Effective length of database: 2,808,413,156
Effective search space: 2499487708840
Effective search space used: 2499487708840
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)