Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009630
(968 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039471.1| solute carrier family 22 member 9 [Bos tauru... 459 e-129
Alignment gi|XP_002699367.1| PREDICTED: solute carrier family 22, member ... 377 e-104
Alignment gi|XP_598472.4| PREDICTED: solute carrier family 22, member 10-... 375 e-104
Alignment gi|XP_002699347.1| PREDICTED: solute carrier family 22, member ... 368 e-102
Alignment gi|XP_601072.4| PREDICTED: solute carrier family 22, member 10-... 368 e-102
Alignment gi|XP_002699346.1| PREDICTED: solute carrier family 22, member ... 365 e-101
Alignment gi|XP_605131.4| PREDICTED: solute carrier family 22, member 10-... 363 e-100
Alignment gi|XP_002699345.1| PREDICTED: solute carrier family 22, member ... 356 2e-98
Alignment gi|XP_610882.4| PREDICTED: solute carrier family 22, member 10-... 356 2e-98
Alignment gi|NP_001095387.1| solute carrier family 22, member 10 [Bos tau... 343 1e-94
>ref|NP_001039471.1| solute carrier family 22 member 9 [Bos taurus].
Length = 552
Score = 459 bits (1181), Expect = e-129
Identities = 218/253 (86%), Positives = 240/253 (94%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQDLLDQVGGLGRFQILQM+ LCISSLI YPHILLENFTAAVPGH+CWVHIL+N+TDS
Sbjct: 1 MAFQDLLDQVGGLGRFQILQMLLLCISSLITYPHILLENFTAAVPGHQCWVHILNNNTDS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
AN+TGTLS DALLRISIPLDSNL+PEKCRR+ PQWQLL+LN TFPN+TDLDTE CVDGW
Sbjct: 61 ANATGTLSPDALLRISIPLDSNLRPEKCRRFSRPQWQLLNLNRTFPNITDLDTESCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD+S F+STIVT+WDL+CESQSLKS+AKFLFM GMLVGSI+YGHLSDRFGR+L+ R CL
Sbjct: 121 VYDQSIFTSTIVTEWDLVCESQSLKSMAKFLFMAGMLVGSIVYGHLSDRFGRRLIFRCCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAITDT AAFAPT+LIYCSLRFLAGFSTMSILTNC+VLIVEWTVPRFQ MGMT++ICA
Sbjct: 181 LQLAITDTSAAFAPTYLIYCSLRFLAGFSTMSILTNCTVLIVEWTVPRFQVMGMTLSICA 240
Query: 928 ACMGQIILGGLAF 966
AC+GQIILGGLAF
Sbjct: 241 ACLGQIILGGLAF 253
>ref|XP_002699367.1| PREDICTED: solute carrier family 22, member 10-like [Bos taurus].
Length = 577
Score = 377 bits (967), Expect = e-104
Identities = 183/257 (71%), Positives = 209/257 (81%)
Frame = +1
Query: 196 CSASMAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDN 375
C MAF++LLD+VGGLG+FQILQM + S +I ILLENFTAA+P HRCWVHILDN
Sbjct: 22 CLCPMAFEELLDEVGGLGKFQILQMALILPSLMIIVCQILLENFTAAIPRHRCWVHILDN 81
Query: 376 DTDSANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPC 555
DT S N TG LS D LLRISIPLDSNLKPEKC R+LHPQWQLLHLN TFPN+TDLDTEPC
Sbjct: 82 DTVSDNDTGFLSPDVLLRISIPLDSNLKPEKCHRFLHPQWQLLHLNGTFPNMTDLDTEPC 141
Query: 556 VDGWVYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLML 735
VDGWVYD S FSSTIVT+WDLIC+ QS K VA+ LFM GMLVG IYGHLSDRFGRKL+L
Sbjct: 142 VDGWVYDHSLFSSTIVTEWDLICDHQSQKPVAQSLFMAGMLVGGFIYGHLSDRFGRKLIL 201
Query: 736 RWCLLQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTM 915
R CLLQLAI+ TCAAFAPTFLIYCS+RF +G S + I+ N +LI+EWT + +AM +T+
Sbjct: 202 RCCLLQLAISGTCAAFAPTFLIYCSIRFWSGCSAVVIVANNIMLIIEWTRSQSKAMILTL 261
Query: 916 AICAACMGQIILGGLAF 966
C MGQ++LGGLAF
Sbjct: 262 VACTFSMGQMMLGGLAF 278
>ref|XP_598472.4| PREDICTED: solute carrier family 22, member 10-like [Bos taurus].
Length = 577
Score = 375 bits (964), Expect = e-104
Identities = 182/257 (70%), Positives = 209/257 (81%)
Frame = +1
Query: 196 CSASMAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDN 375
C MAF++LLD+VGGLG+FQILQM + S +I ILLENFTAA+P HRCWVHILDN
Sbjct: 22 CLCPMAFEELLDEVGGLGKFQILQMALILPSLMIIVCQILLENFTAAIPRHRCWVHILDN 81
Query: 376 DTDSANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPC 555
DT S N TG LS D L+RISIPLDSNLKPEKC R+LHPQWQLLHLN TFPN+TDLDTEPC
Sbjct: 82 DTVSDNDTGFLSPDVLVRISIPLDSNLKPEKCHRFLHPQWQLLHLNGTFPNMTDLDTEPC 141
Query: 556 VDGWVYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLML 735
VDGWVYD S FSSTIVT+WDLIC+ QS K VA+ LFM GMLVG IYGHLSDRFGRKL+L
Sbjct: 142 VDGWVYDHSLFSSTIVTEWDLICDHQSQKPVAQSLFMAGMLVGGFIYGHLSDRFGRKLIL 201
Query: 736 RWCLLQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTM 915
R CLLQLAI+ TCAAFAPTFLIYCS+RF +G S + I+ N +LI+EWT + +AM +T+
Sbjct: 202 RCCLLQLAISGTCAAFAPTFLIYCSIRFWSGCSAVVIVANNIMLIIEWTRSQSKAMILTL 261
Query: 916 AICAACMGQIILGGLAF 966
C MGQ++LGGLAF
Sbjct: 262 VACTFSMGQMMLGGLAF 278
>ref|XP_002699347.1| PREDICTED: solute carrier family 22, member 10-like [Bos taurus].
Length = 552
Score = 368 bits (944), Expect = e-102
Identities = 178/253 (70%), Positives = 209/253 (82%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF++LLD+VGGLG+FQI+Q+VF+ + +I H LLENFTAA+PGHRCWVHILDN T S
Sbjct: 1 MAFEELLDKVGGLGKFQIVQVVFVLPTYMIVVCHSLLENFTAAIPGHRCWVHILDNATVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TG LS D LLRISIPLDSNLKPEKC R+LH QWQLLHLN TFPN+TDLDTEPCVDGW
Sbjct: 61 GNDTGILSPDVLLRISIPLDSNLKPEKCHRFLHAQWQLLHLNGTFPNMTDLDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S FSSTIVT+WDLIC+ S KSV + L+M GMLVG +IYG LSDRFGRKL+LR CL
Sbjct: 121 VYDHSLFSSTIVTEWDLICDHLSQKSVGQSLYMAGMLVGGLIYGLLSDRFGRKLILRCCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI+ TCAAFAPTFLIYCSLRF +G S + IL+N +L+ EWT + +AM +T+ CA
Sbjct: 181 LQLAISGTCAAFAPTFLIYCSLRFWSGCSAVVILSNSGMLVTEWTRSQSKAMVITLLSCA 240
Query: 928 ACMGQIILGGLAF 966
+GQ++LGGLAF
Sbjct: 241 LSIGQMMLGGLAF 253
>ref|XP_601072.4| PREDICTED: solute carrier family 22, member 10-like [Bos taurus].
Length = 552
Score = 368 bits (944), Expect = e-102
Identities = 178/253 (70%), Positives = 209/253 (82%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF++LLD+VGGLG+FQI+Q+VF+ + +I H LLENFTAA+PGHRCWVHILDN T S
Sbjct: 1 MAFEELLDKVGGLGKFQIVQVVFVLPTYMIVVCHSLLENFTAAIPGHRCWVHILDNATVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TG LS D LLRISIPLDSNLKPEKC R+LH QWQLLHLN TFPN+TDLDTEPCVDGW
Sbjct: 61 GNDTGILSPDVLLRISIPLDSNLKPEKCHRFLHAQWQLLHLNGTFPNMTDLDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S FSSTIVT+WDLIC+ S KSV + L+M GMLVG +IYG LSDRFGRKL+LR CL
Sbjct: 121 VYDHSLFSSTIVTEWDLICDHLSQKSVGQSLYMAGMLVGGLIYGLLSDRFGRKLILRCCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI+ TCAAFAPTFLIYCSLRF +G S + IL+N +L+ EWT + +AM +T+ CA
Sbjct: 181 LQLAISGTCAAFAPTFLIYCSLRFWSGCSAVVILSNSGMLVTEWTRSQSKAMVITLLSCA 240
Query: 928 ACMGQIILGGLAF 966
+GQ++LGGLAF
Sbjct: 241 LSIGQMMLGGLAF 253
>ref|XP_002699346.1| PREDICTED: solute carrier family 22, member 10-like [Bos taurus].
Length = 552
Score = 365 bits (936), Expect = e-101
Identities = 175/253 (69%), Positives = 203/253 (80%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF++LLD+VGGLG+FQILQM + S +I H LLENFTAAVPGHRCWVHILDN T S
Sbjct: 1 MAFEELLDKVGGLGKFQILQMALIFPSFMIVVCHSLLENFTAAVPGHRCWVHILDNATVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TG LS D LLRISIPLDSNLKPEKCRR+LHPQWQLLHLN TFPN+TDLDTEPCVDGW
Sbjct: 61 DNDTGILSPDVLLRISIPLDSNLKPEKCRRFLHPQWQLLHLNGTFPNMTDLDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S SSTIVT+WDL+C+ QS K + + L MVG LVG +IYGHLSDRFGRKL+L+WCL
Sbjct: 121 VYDHSLVSSTIVTEWDLVCDQQSQKPLIQSLVMVGTLVGGLIYGHLSDRFGRKLILKWCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI+ TC +FAP IYC LRFL+G S I+TN LI+EWT + + M +T+ CA
Sbjct: 181 LQLAISGTCTSFAPNIFIYCLLRFLSGCSIAVIITNNCFLIIEWTRSQSKGMVLTLIYCA 240
Query: 928 ACMGQIILGGLAF 966
+GQ++LGGLAF
Sbjct: 241 LSIGQMMLGGLAF 253
>ref|XP_605131.4| PREDICTED: solute carrier family 22, member 10-like [Bos taurus].
Length = 552
Score = 363 bits (931), Expect = e-100
Identities = 174/253 (68%), Positives = 202/253 (79%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF++LLD+VGGLG+FQILQM + S +I H LLENFTAAVPGHRCWVHILDN T S
Sbjct: 1 MAFEELLDKVGGLGKFQILQMALIFPSFMIVVCHSLLENFTAAVPGHRCWVHILDNATVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TG LS D LLRISIPLDSNLKPEKCRR+LHPQWQLLHLN TFPN+TDLDTEPCVDGW
Sbjct: 61 DNDTGILSPDVLLRISIPLDSNLKPEKCRRFLHPQWQLLHLNGTFPNMTDLDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S SSTIVT+WDL+C+ QS K + + L MVG LVG +IYGHLSDRFGRKL+L+WCL
Sbjct: 121 VYDHSLVSSTIVTEWDLVCDQQSQKPLIQSLVMVGTLVGGLIYGHLSDRFGRKLILKWCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQL I+ TC +FAP IYC LRFL+G S I+TN LI+EWT + + M +T+ CA
Sbjct: 181 LQLPISGTCTSFAPNIFIYCLLRFLSGCSIAVIITNNCFLIIEWTRSQSKGMVLTLIYCA 240
Query: 928 ACMGQIILGGLAF 966
+GQ++LGGLAF
Sbjct: 241 LSIGQMMLGGLAF 253
>ref|XP_002699345.1| PREDICTED: solute carrier family 22, member 10-like [Bos taurus].
Length = 552
Score = 356 bits (913), Expect = 2e-98
Identities = 174/253 (68%), Positives = 202/253 (79%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MA ++LLD+VGGLG+FQILQM +I H LLENFTAAVPGH CWVH LDN T S
Sbjct: 1 MALEELLDKVGGLGKFQILQMALTFPFYMIVVCHSLLENFTAAVPGHHCWVHNLDNATVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TG LS D LLRISIPLDSN KPEKCRR+LHPQWQLLHLN TFPN+TDLDTEPCVDGW
Sbjct: 61 DNDTGILSPDVLLRISIPLDSNFKPEKCRRFLHPQWQLLHLNGTFPNMTDLDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
V+D S FS TIVT+WDL+C+ QS KS+ + LFM GMLVGS IYGHLSDRFGRKL+LR CL
Sbjct: 121 VFDHSLFSFTIVTEWDLVCDHQSQKSMVQSLFMAGMLVGSFIYGHLSDRFGRKLILRCCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI+ CAAFAPTFLIYC LRF +G S ++I++N S+LIV W + +A +T+ CA
Sbjct: 181 LQLAISGICAAFAPTFLIYCLLRFWSGCSAVAIVSNNSMLIVAWVRAQSKATVITLIACA 240
Query: 928 ACMGQIILGGLAF 966
+GQ++LGGLAF
Sbjct: 241 LSIGQMMLGGLAF 253
>ref|XP_610882.4| PREDICTED: solute carrier family 22, member 10-like [Bos taurus].
Length = 552
Score = 356 bits (913), Expect = 2e-98
Identities = 174/253 (68%), Positives = 202/253 (79%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MA ++LLD+VGGLG+FQILQM +I H LLENFTAAVPGH CWVH LDN T S
Sbjct: 1 MALEELLDKVGGLGKFQILQMALTFPFYMIVVCHSLLENFTAAVPGHHCWVHNLDNATVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TG LS D LLRISIPLDSN KPEKCRR+LHPQWQLLHLN TFPN+TDLDTEPCVDGW
Sbjct: 61 DNDTGILSPDVLLRISIPLDSNFKPEKCRRFLHPQWQLLHLNGTFPNMTDLDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
V+D S FS TIVT+WDL+C+ QS KS+ + LFM GMLVGS IYGHLSDRFGRKL+LR CL
Sbjct: 121 VFDHSLFSFTIVTEWDLVCDHQSQKSMVQSLFMAGMLVGSFIYGHLSDRFGRKLILRCCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI+ CAAFAPTFLIYC LRF +G S ++I++N S+LIV W + +A +T+ CA
Sbjct: 181 LQLAISGICAAFAPTFLIYCLLRFWSGCSAVAIVSNNSMLIVAWVRAQSKATVITLIACA 240
Query: 928 ACMGQIILGGLAF 966
+GQ++LGGLAF
Sbjct: 241 LSIGQMMLGGLAF 253
>ref|NP_001095387.1| solute carrier family 22, member 10 [Bos taurus].
Length = 546
Score = 343 bits (880), Expect = 1e-94
Identities = 170/253 (67%), Positives = 201/253 (79%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF++LL++VGGLG+FQILQMV IA HILLENFTAA+PGHRCWV+ILDN T+
Sbjct: 1 MAFEELLNEVGGLGKFQILQMVLALPLVGIAACHILLENFTAAIPGHRCWVYILDNATE- 59
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
LS D LLRISIPLDS+LKPEKC R+LHPQWQLLHLN TF N+T LDTEPC+DGW
Sbjct: 60 -----ILSPDVLLRISIPLDSDLKPEKCHRFLHPQWQLLHLNRTFANMTGLDTEPCMDGW 114
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S FSSTIVT+WDLIC+ QS KSV +F+FM GM VG +YGHLSDRFGRKL+LR CL
Sbjct: 115 VYDHSLFSSTIVTEWDLICDHQSQKSVVQFVFMAGMQVGGFVYGHLSDRFGRKLILRCCL 174
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI+ TC AFAPTFLIY LRF +G S ++I+TN +LI EWT + +AM + + CA
Sbjct: 175 LQLAISGTCTAFAPTFLIYSLLRFWSGCSAVAIITNNWLLIAEWTRSQSKAMVIMLITCA 234
Query: 928 ACMGQIILGGLAF 966
+GQ++LGGLAF
Sbjct: 235 ISIGQMMLGGLAF 247
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,251,212
Number of extensions: 1052213
Number of successful extensions: 3165
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 3134
Number of HSP's successfully gapped: 32
Length of query: 322
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 220
Effective length of database: 14,306,398
Effective search space: 3147407560
Effective search space used: 3147407560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009630
(968 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_533255.2| PREDICTED: similar to putative UST1-like organi... 424 e-119
Alignment gi|XP_533256.2| PREDICTED: similar to putative UST1-like organi... 343 1e-94
Alignment gi|XP_867390.1| PREDICTED: similar to putative UST1-like organi... 298 7e-81
Alignment gi|XP_540882.2| PREDICTED: similar to urate anion exchanger 1 i... 278 7e-75
Alignment gi|XP_854924.1| PREDICTED: similar to solute carrier family 22 ... 267 1e-71
Alignment gi|XP_867412.1| PREDICTED: similar to putative UST1-like organi... 244 1e-64
Alignment gi|XP_867400.1| PREDICTED: similar to solute carrier family 22 ... 244 1e-64
Alignment gi|XP_854857.1| PREDICTED: similar to solute carrier family 22 ... 208 7e-54
Alignment gi|XP_533258.1| PREDICTED: similar to solute carrier family 22 ... 206 3e-53
Alignment gi|XP_867439.1| PREDICTED: similar to solute carrier family 22 ... 206 3e-53
>ref|XP_533255.2| PREDICTED: similar to putative UST1-like organic anion transporter
isoform 1 [Canis familiaris].
Length = 552
Score = 424 bits (1090), Expect = e-119
Identities = 201/253 (79%), Positives = 223/253 (88%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQDLLDQVG LGRFQILQMVFLCIS+L+ YPHILLENFTAA PGHRCWVH+LDNDT S
Sbjct: 1 MAFQDLLDQVGALGRFQILQMVFLCISNLVVYPHILLENFTAASPGHRCWVHVLDNDTVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
AN TG LSQDALLRISIPLDSNL+PEKCRR++HPQWQLL LN TF N+++ D EPCVDGW
Sbjct: 61 ANGTGILSQDALLRISIPLDSNLRPEKCRRFIHPQWQLLPLNGTFFNMSERDIEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD+S+F STIVTKWDL+CESQSLKS+AKFLFM G LVG II+GHLSDR GR+L+LRWC
Sbjct: 121 VYDQSSFPSTIVTKWDLVCESQSLKSMAKFLFMTGTLVGGIIFGHLSDRLGRRLILRWCF 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI DTCAAFAPTF IYC LR LAG STM+ILTN ++L VEWT PR QAM + M ICA
Sbjct: 181 LQLAIADTCAAFAPTFAIYCVLRILAGCSTMTILTNTTMLFVEWTEPRLQAMAIAMTICA 240
Query: 928 ACMGQIILGGLAF 966
AC+GQ+ LGGLAF
Sbjct: 241 ACVGQMTLGGLAF 253
>ref|XP_533256.2| PREDICTED: similar to putative UST1-like organic anion transporter
isoform 1 [Canis familiaris].
Length = 552
Score = 343 bits (881), Expect = 1e-94
Identities = 164/253 (64%), Positives = 202/253 (79%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQ+LLDQVG LG++QILQMV + + ++ I LENFTAA+PGHRCWV+ILDNDT S
Sbjct: 1 MAFQELLDQVGDLGKYQILQMVLIFPTLMMLLCQIFLENFTAAIPGHRCWVNILDNDTVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N T LS DALLRISIP+DS+L+P+KC R++HPQWQLLH+N TF N+T+ D E C+DGW
Sbjct: 61 DNDTEILSPDALLRISIPMDSDLRPDKCHRFIHPQWQLLHVNGTFTNMTEPDKETCLDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD+S+F STI+T+WDL+C QS KSV +FLFM GMLVG +I GHLSDRFGRKL+LRWCL
Sbjct: 121 VYDQSSFPSTIITEWDLVCSYQSQKSVVQFLFMTGMLVGGLIGGHLSDRFGRKLILRWCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQL I T AAFAPTFLIYC L FL+G +++ IL N +LI+EW P + M +T+ CA
Sbjct: 181 LQLTIFGTSAAFAPTFLIYCLLCFLSGCASVIILINGPLLIIEWIRPSSKVMAITLMSCA 240
Query: 928 ACMGQIILGGLAF 966
+GQ+ILGGLAF
Sbjct: 241 LSLGQMILGGLAF 253
>ref|XP_867390.1| PREDICTED: similar to putative UST1-like organic anion transporter
isoform 2 [Canis familiaris].
Length = 444
Score = 298 bits (762), Expect = 7e-81
Identities = 140/169 (82%), Positives = 154/169 (91%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQDLLDQVG LGRFQILQMVFLCIS+L+ YPHILLENFTAA PGHRCWVH+LDNDT S
Sbjct: 1 MAFQDLLDQVGALGRFQILQMVFLCISNLVVYPHILLENFTAASPGHRCWVHVLDNDTVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
AN TG LSQDALLRISIPLDSNL+PEKCRR++HPQWQLL LN TF N+++ D EPCVDGW
Sbjct: 61 ANGTGILSQDALLRISIPLDSNLRPEKCRRFIHPQWQLLPLNGTFFNMSERDIEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDR 714
VYD+S+F STIVTKWDL+CESQSLKS+AKFLFM G LVG II+GHLSDR
Sbjct: 121 VYDQSSFPSTIVTKWDLVCESQSLKSMAKFLFMTGTLVGGIIFGHLSDR 169
>ref|XP_540882.2| PREDICTED: similar to urate anion exchanger 1 isoform a isoform 1
[Canis familiaris].
Length = 533
Score = 278 bits (710), Expect = 7e-75
Identities = 132/253 (52%), Positives = 175/253 (69%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF +LLD VGGLGRFQILQMV L + + +LENF+AAVP HRCWV +LDN TD
Sbjct: 1 MAFSELLDLVGGLGRFQILQMVALVVPIMWLTTQSMLENFSAAVPNHRCWVPLLDNSTDQ 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
A+ GTLS LL +SIPL N +P +C R+ PQWQLL N T N ++ TEPCVDGW
Sbjct: 61 ASVPGTLSLKDLLTVSIPLGPNHEPHQCLRFRQPQWQLLDPNATATNWSEAATEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S F+STIV KWDL+C+S +LK +A+ +++ GMLVG+ + G SDRFGR+L+L W
Sbjct: 121 VYDNSTFTSTIVAKWDLVCDSHALKPMAQSIYLSGMLVGAAVCGRASDRFGRRLVLTWNY 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ+A++ T AAFAPTF +YC RFL F+ ++ N L++EWT R +A+ MT+
Sbjct: 181 LQMAMSGTVAAFAPTFPVYCLFRFLVAFAVAGVMMNTGTLLIEWTSTRARALAMTLNTLG 240
Query: 928 ACMGQIILGGLAF 966
GQ+++ +A+
Sbjct: 241 FSFGQVLMATVAY 253
>ref|XP_854924.1| PREDICTED: similar to solute carrier family 22 member 11 [Canis
familiaris].
Length = 531
Score = 267 bits (683), Expect = 1e-71
Identities = 126/253 (49%), Positives = 174/253 (68%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF +LL++ GG G FQ LQ+ L + S++ P +L+ENF+AA+PGHRCW H+LDN S
Sbjct: 1 MAFAELLERAGGGGLFQALQVFTLLLPSILVPPQLLMENFSAAIPGHRCWAHVLDN---S 57
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
+ + L+ +ALL ISIP N +P +C R+ PQWQLL N T N ++ TEPCVDGW
Sbjct: 58 SEAPANLTSEALLTISIPPGPNHEPHQCLRFRQPQWQLLDPNATATNWSEAATEPCVDGW 117
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S F+STIV++WDL+CE Q LK + + ++M G+L+GS+ +G LSDRFGRK +L WC
Sbjct: 118 VYDHSTFTSTIVSEWDLVCEYQGLKPMGQSIYMAGVLMGSVFWGLLSDRFGRKPVLSWCC 177
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ+A+ +T FA FLIYC LRFL+ F I+ L+ EWT R +A+ +T+ C+
Sbjct: 178 LQVALANTSTIFASNFLIYCGLRFLSAFGVAGIIMISVTLVAEWTTTRRRAVTITIVGCS 237
Query: 928 ACMGQIILGGLAF 966
+GQ+ LG +AF
Sbjct: 238 YSLGQMTLGAMAF 250
>ref|XP_867412.1| PREDICTED: similar to putative UST1-like organic anion transporter
isoform 3 [Canis familiaris].
Length = 444
Score = 244 bits (622), Expect = 1e-64
Identities = 113/170 (66%), Positives = 140/170 (82%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQ+LLDQVG LG++QILQMV + + ++ I LENFTAA+PGHRCWV+ILDNDT S
Sbjct: 1 MAFQELLDQVGDLGKYQILQMVLIFPTLMMLLCQIFLENFTAAIPGHRCWVNILDNDTVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N T LS DALLRISIP+DS+L+P+KC R++HPQWQLLH+N TF N+T+ D E C+DGW
Sbjct: 61 DNDTEILSPDALLRISIPMDSDLRPDKCHRFIHPQWQLLHVNGTFTNMTEPDKETCLDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRF 717
VYD+S+F STI+T+WDL+C QS KSV +FLFM GMLVG +I GHLSDR+
Sbjct: 121 VYDQSSFPSTIITEWDLVCSYQSQKSVVQFLFMTGMLVGGLIGGHLSDRW 170
>ref|XP_867400.1| PREDICTED: similar to solute carrier family 22 (organic
anion/cation transporter), member 9 isoform 2 [Canis
familiaris].
Length = 376
Score = 244 bits (622), Expect = 1e-64
Identities = 113/170 (66%), Positives = 140/170 (82%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQ+LLDQVG LG++QILQMV + + ++ I LENFTAA+PGHRCWV+ILDNDT S
Sbjct: 1 MAFQELLDQVGDLGKYQILQMVLIFPTLMMLLCQIFLENFTAAIPGHRCWVNILDNDTVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N T LS DALLRISIP+DS+L+P+KC R++HPQWQLLH+N TF N+T+ D E C+DGW
Sbjct: 61 DNDTEILSPDALLRISIPMDSDLRPDKCHRFIHPQWQLLHVNGTFTNMTEPDKETCLDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRF 717
VYD+S+F STI+T+WDL+C QS KSV +FLFM GMLVG +I GHLSDR+
Sbjct: 121 VYDQSSFPSTIITEWDLVCSYQSQKSVVQFLFMTGMLVGGLIGGHLSDRW 170
>ref|XP_854857.1| PREDICTED: similar to solute carrier family 22 (organic anion
transporter), member 20 [Canis familiaris].
Length = 519
Score = 208 bits (529), Expect = 7e-54
Identities = 109/253 (43%), Positives = 158/253 (62%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
M F +LL +GG+G FQILQ + +++ H L+NFTA P H C N T+
Sbjct: 1 MGFSELLHTIGGMGNFQILQTALIMFPTILITCHNFLQNFTAMTPEHHCRPV---NWTNG 57
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
+ G + LLR+ IPLD + KPE+C R+ P WQ+L+LN T + +LDTE C+DGW
Sbjct: 58 SQVPGGVRDGDLLRVFIPLDKDQKPERCLRFSEPHWQILNLNGT--SSLNLDTEGCLDGW 115
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD+S SS IV++WDL+C+ +SLKS+A+ ++M G LVG+II+G SDR+GRK +L+
Sbjct: 116 VYDQSVDSS-IVSEWDLVCDHKSLKSIAQSIYMTGQLVGAIIFGIFSDRYGRKRVLQSAT 174
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
+Q+ AA AP F YC+ RFL+G + I+ L +EWT + + + T A+
Sbjct: 175 VQMIAVGLGAACAPGFPAYCAFRFLSGMAMTGIIVASLCLTMEWTPTQRRTLVNTYAMYM 234
Query: 928 ACMGQIILGGLAF 966
+GQ+IL GLA+
Sbjct: 235 ITLGQVILSGLAY 247
>ref|XP_533258.1| PREDICTED: similar to solute carrier family 22 member 6 isoform b
isoform 1 [Canis familiaris].
Length = 550
Score = 206 bits (523), Expect = 3e-53
Identities = 108/256 (42%), Positives = 152/256 (59%), Gaps = 4/256 (1%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLL QVGG+GRFQ +Q+ + + L+ H L+NFTAA+P H C
Sbjct: 1 MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHC----------R 50
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLD----TEPC 555
+ LS D L +P D +PE C Y PQ FPN TD + TEPC
Sbjct: 51 PPANANLSTDGELEAWLPRDRQGQPESCLHYTIPQQ-----GPPFPNGTDANSTGATEPC 105
Query: 556 VDGWVYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLML 735
+GW+YD S F STIVT+WDL+C +++L+ +A+ L+MVG+L+G++++G+L+DR GR+ +L
Sbjct: 106 TNGWIYDNSTFPSTIVTEWDLVCSNRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKLL 165
Query: 736 RWCLLQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTM 915
LQ A++ TCAAFAP+F +YC+ R L+G S I NC L VEW +A T+
Sbjct: 166 ILNYLQTAVSGTCAAFAPSFPVYCAFRLLSGMSLAGIALNCMTLNVEWMPIHTRACVGTL 225
Query: 916 AICAACMGQIILGGLA 963
+GQ +L G+A
Sbjct: 226 TGYVYSLGQFLLAGVA 241
>ref|XP_867439.1| PREDICTED: similar to solute carrier family 22 member 6 isoform c
isoform 2 [Canis familiaris].
Length = 505
Score = 206 bits (523), Expect = 3e-53
Identities = 108/256 (42%), Positives = 152/256 (59%), Gaps = 4/256 (1%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLL QVGG+GRFQ +Q+ + + L+ H L+NFTAA+P H C
Sbjct: 1 MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHC----------R 50
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLD----TEPC 555
+ LS D L +P D +PE C Y PQ FPN TD + TEPC
Sbjct: 51 PPANANLSTDGELEAWLPRDRQGQPESCLHYTIPQQ-----GPPFPNGTDANSTGATEPC 105
Query: 556 VDGWVYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLML 735
+GW+YD S F STIVT+WDL+C +++L+ +A+ L+MVG+L+G++++G+L+DR GR+ +L
Sbjct: 106 TNGWIYDNSTFPSTIVTEWDLVCSNRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKLL 165
Query: 736 RWCLLQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTM 915
LQ A++ TCAAFAP+F +YC+ R L+G S I NC L VEW +A T+
Sbjct: 166 ILNYLQTAVSGTCAAFAPSFPVYCAFRLLSGMSLAGIALNCMTLNVEWMPIHTRACVGTL 225
Query: 916 AICAACMGQIILGGLA 963
+GQ +L G+A
Sbjct: 226 TGYVYSLGQFLLAGVA 241
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,981,491
Number of extensions: 1085757
Number of successful extensions: 3147
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 3119
Number of HSP's successfully gapped: 28
Length of query: 322
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 219
Effective length of database: 15,440,896
Effective search space: 3381556224
Effective search space used: 3381556224
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009630
(968 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003122656.2| PREDICTED: solute carrier family 22 member 9... 431 e-121
Alignment gi|XP_003122663.2| PREDICTED: solute carrier family 22 member 1... 365 e-101
Alignment gi|XP_003122618.1| PREDICTED: solute carrier family 22 member 1... 264 6e-71
Alignment gi|XP_003122637.1| PREDICTED: LOW QUALITY PROTEIN: solute carri... 223 2e-58
Alignment gi|XP_003122588.1| PREDICTED: solute carrier family 22 member 2... 207 9e-54
Alignment gi|NP_001001261.1| solute carrier family 22 member 6 [Sus scrof... 194 5e-50
Alignment gi|NP_999620.1| solute carrier family 22 member 8 [Sus scrofa]. 167 6e-42
Alignment gi|NP_001038082.1| solute carrier family 22 member 7 [Sus scrof... 128 4e-30
Alignment gi|XP_003132165.1| PREDICTED: solute carrier family 22 member 1... 121 7e-28
Alignment gi|XP_003358414.1| PREDICTED: solute carrier family 22 member 1... 121 7e-28
>ref|XP_003122656.2| PREDICTED: solute carrier family 22 member 9-like [Sus scrofa].
Length = 496
Score = 431 bits (1108), Expect = e-121
Identities = 206/253 (81%), Positives = 225/253 (88%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQDLLDQVGGLGRFQILQMVFLCI S+IAYPHILLENFTAAVPGHRCWVHILDNDTDS
Sbjct: 1 MAFQDLLDQVGGLGRFQILQMVFLCICSIIAYPHILLENFTAAVPGHRCWVHILDNDTDS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
ANSTGTLSQDALLRISIPLDSNLKPEKCRR+LHPQWQLLHL+ TFPNVTDLDTEPCVDGW
Sbjct: 61 ANSTGTLSQDALLRISIPLDSNLKPEKCRRFLHPQWQLLHLSGTFPNVTDLDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS+FSSTIVT+WDL+C+ QSL SV KFL + GMLVG I+Y HLSDRFGRKL+L WCL
Sbjct: 121 VYDRSSFSSTIVTEWDLVCDYQSLTSVPKFLCITGMLVGGILYSHLSDRFGRKLILSWCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLA+ DTCA AP F IYC LRFLAG +IL N ++LIVEW VP+FQAMG+ + A
Sbjct: 181 LQLALADTCAVIAPNFPIYCLLRFLAGLPAATILVNSNMLIVEWMVPQFQAMGVALVTSA 240
Query: 928 ACMGQIILGGLAF 966
A +GQI+LGGLAF
Sbjct: 241 AGVGQILLGGLAF 253
>ref|XP_003122663.2| PREDICTED: solute carrier family 22 member 10 [Sus scrofa].
Length = 552
Score = 365 bits (938), Expect = e-101
Identities = 175/252 (69%), Positives = 206/252 (81%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF++LL+QVGGLG+FQILQMV ++ ILLENFTAA+P HRCWVHILDNDT S
Sbjct: 1 MAFEELLNQVGGLGKFQILQMVLALPCLMLTICQILLENFTAAIPAHRCWVHILDNDTVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TGTLS D LLRISIPLDSNLKPEKC R+LHPQWQLLHLN TFPNVTDLDTEPCVDGW
Sbjct: 61 DNDTGTLSPDVLLRISIPLDSNLKPEKCHRFLHPQWQLLHLNGTFPNVTDLDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS+FSSTIVT+WDL+C+ QS K + +F FM GML+G IYG LSDRFGRK++LRWCL
Sbjct: 121 VYDRSSFSSTIVTEWDLVCDYQSQKPLVQFAFMAGMLLGGFIYGCLSDRFGRKVILRWCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI+ TCAAFAP FL+YCSLRF +G ST+ ++N +L++EW + +A +T+ CA
Sbjct: 181 LQLAISGTCAAFAPNFLLYCSLRFWSGCSTVVAMSNNWMLVIEWIRSQSKAWVITLMNCA 240
Query: 928 ACMGQIILGGLA 963
MGQI+LG LA
Sbjct: 241 FSMGQIMLGALA 252
>ref|XP_003122618.1| PREDICTED: solute carrier family 22 member 12 [Sus scrofa].
Length = 553
Score = 264 bits (674), Expect = 6e-71
Identities = 121/253 (47%), Positives = 175/253 (69%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF +LLD+VGGLGRFQ+LQ V L + + ++ENF+AAVP HRCW +LDN T
Sbjct: 1 MAFSELLDRVGGLGRFQVLQTVALVVPIMWLTTQSMVENFSAAVPSHRCWAPLLDNSTAQ 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
A+++G + +ALL +SIP N +P +C R+ PQW LL N T N ++ TEPCVDGW
Sbjct: 61 ASASGAPNPEALLAVSIPPGLNQEPHQCLRFRQPQWHLLDPNATATNWSEAATEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS F+STIV +WDL+C+SQ+LK +A+ +++ G+LVG+ + G SDRFGR+L+L W
Sbjct: 121 VYDRSVFTSTIVMEWDLVCDSQALKPMAQSIYLAGILVGAAVCGQASDRFGRRLVLTWSY 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ+A + T AAFAPTF +YC RFL F+T ++ N L++EWT + + + +T+
Sbjct: 181 LQMAASGTAAAFAPTFPVYCLFRFLVAFATAGVMMNTITLLMEWTSVQARVLAVTLNSLG 240
Query: 928 ACMGQIILGGLAF 966
+GQ+++ +A+
Sbjct: 241 FSLGQVLMAAVAY 253
>ref|XP_003122637.1| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 22 member
11-like [Sus scrofa].
Length = 547
Score = 223 bits (567), Expect = 2e-58
Identities = 116/253 (45%), Positives = 156/253 (61%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF +LL+Q G G FQ LQ + L + S+ +L ENF+A GHRCW +LDN ++
Sbjct: 1 MAFTELLEQTGAGGLFQALQALTLLLLSIWMPFLMLAENFSA---GHRCWAPLLDNGSEV 57
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
+ L+ +ALL +SIP N +P +C + PQW LL N T N ++ TEPCVDGW
Sbjct: 58 STH---LTPEALLAVSIPPGLNQEPHQCLHFRQPQWXLLDPNATAINWSEAATEPCVDGW 114
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
V DRS F+STIVT+WDL+C Q LK + + +FM G + GSI+ G LS R GRK L WC
Sbjct: 115 VSDRSEFTSTIVTEWDLVCAHQGLKPLGQPIFMAGTIAGSIVLGLLSHRLGRKPKLSWCC 174
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ+A+ AP FL+YC LRFL+ +L ++L VEWT R +A+ +TM C+
Sbjct: 175 LQVAVATISTIVAPNFLVYCGLRFLSSVGWSGLLLTSTMLTVEWTTTRMRAVTVTMMACS 234
Query: 928 ACMGQIILGGLAF 966
+GQ+ LG AF
Sbjct: 235 YGVGQMALGATAF 247
>ref|XP_003122588.1| PREDICTED: solute carrier family 22 member 20 [Sus scrofa].
Length = 555
Score = 207 bits (526), Expect = 9e-54
Identities = 111/256 (43%), Positives = 152/256 (59%), Gaps = 3/256 (1%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWV---HILDND 378
MAF DLLD +GG+GRFQ++ L + + H L+NFTAAVP H C H + D
Sbjct: 1 MAFTDLLDALGGVGRFQLVYTALLLLPCCLLACHNFLQNFTAAVPRHHCQSPANHTVATD 60
Query: 379 TDSANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCV 558
DS A LR ++PLD PE CRR+ PQW LL N + V TE C
Sbjct: 61 NDSG---------AWLRATVPLDRLGAPEPCRRFTKPQWALLSPNAS---VHGAATEGCH 108
Query: 559 DGWVYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLR 738
DGWVYDRS F STIVT+WDL+CE+++L+ +A+ ++M G+LVG+ ++G L+DR GRK L
Sbjct: 109 DGWVYDRSVFPSTIVTEWDLVCEARTLRDLAQSIYMTGVLVGAAVFGSLADRLGRKAPLV 168
Query: 739 WCLLQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMA 918
W LQLA++ A+ +F YC RFL G + I+ N L+VEW R + + +
Sbjct: 169 WSYLQLAVSGAATAYFGSFGAYCVFRFLMGMTFSGIILNSLSLVVEWMPTRGRTVAGVLL 228
Query: 919 ICAACMGQIILGGLAF 966
A +GQ+IL G+A+
Sbjct: 229 GYAFTLGQLILAGVAY 244
>ref|NP_001001261.1| solute carrier family 22 member 6 [Sus scrofa].
Length = 547
Score = 194 bits (494), Expect = 5e-50
Identities = 104/257 (40%), Positives = 150/257 (58%), Gaps = 4/257 (1%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLL QVGG+GRFQ +Q+ + + L+ H L+NFTAA+P H C
Sbjct: 1 MAFNDLLLQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPAHHC----------R 50
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLD----TEPC 555
+ LS+D L +P D +P C R+ PQ FPN T + TEPC
Sbjct: 51 PPADTNLSRDTELEAWLPRDGQGRPASCLRFTSPQ-----RGPPFPNGTGTNGTGTTEPC 105
Query: 556 VDGWVYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLML 735
+GW+YD F STIVT+WDL+C ++L+ +A+ L+MVG+L+G++I+G+L++R GR+ +L
Sbjct: 106 TNGWIYDPGTFPSTIVTEWDLVCSRRALRQLAQSLYMVGVLLGAMIFGYLANRLGRRKVL 165
Query: 736 RWCLLQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTM 915
LQ A++ TCAAFAP F +YC+ R L+G S I +C L VEW +A T+
Sbjct: 166 ILNYLQTAVSGTCAAFAPNFPVYCAFRLLSGMSLAGISLSCMTLNVEWMPIHTRACVGTL 225
Query: 916 AICAACMGQIILGGLAF 966
+GQ +L G+A+
Sbjct: 226 IGYVYSLGQFLLAGVAY 242
>ref|NP_999620.1| solute carrier family 22 member 8 [Sus scrofa].
Length = 543
Score = 167 bits (424), Expect = 6e-42
Identities = 101/253 (39%), Positives = 139/253 (54%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
M F +L+D+VG G FQ+L V L + L H LL+ FTA P H C +
Sbjct: 1 MTFAELVDRVGSKGPFQLLHTVLLGLPILGMANHNLLQIFTAPTPAHHC------RPPPN 54
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
A++ + +P N KPE C R+++P N + PN T TEPC+DGW
Sbjct: 55 ASAGPWV---------LPTGLNGKPETCLRFVYPP------NASLPNDTRGATEPCLDGW 99
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
+Y+ +IVT+WDL+C S LK +A+ +FM G+LVG ++ G LSDRFGRK +L +
Sbjct: 100 IYN-IVDRDSIVTEWDLVCSSSKLKEMAQSVFMAGILVGGLVLGALSDRFGRKPILIFSY 158
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
L L + + AAF+PTF IY RFL GFS I + ++L VEW RF+A+
Sbjct: 159 LLLGASGSGAAFSPTFSIYAVFRFLCGFSISGISLSTAILNVEWVSTRFRAIKSIAVGFF 218
Query: 928 ACMGQIILGGLAF 966
GQ IL GLA+
Sbjct: 219 YTFGQFILPGLAY 231
>ref|NP_001038082.1| solute carrier family 22 member 7 [Sus scrofa].
Length = 547
Score = 128 bits (322), Expect = 4e-30
Identities = 75/238 (31%), Positives = 111/238 (46%), Gaps = 14/238 (5%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF++LLD+VGG G FQ+ + L + ++ H LL F AVP HRC +
Sbjct: 1 MAFEELLDKVGGFGPFQLWNVALLALPRVLLPMHFLLPIFLTAVPAHRCAL--------P 52
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVT----------- 534
QDA L +P + + + C R+ H + PN T
Sbjct: 53 GAPANFSHQDAWLEAHLPREPDGRFSSCLRFTH--------SRALPNTTLWGLGQSPGEQ 104
Query: 535 ---DLDTEPCVDGWVYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHL 705
+ T PC GW YD S FSSTI T+WDL+CE + L F G+LVG++ +G+L
Sbjct: 105 LEGEPSTVPCPQGWEYDHSEFSSTIATEWDLVCEQKGLNRATSTFFFAGVLVGAVAFGYL 164
Query: 706 SDRFGRKLMLRWCLLQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEW 879
SDRFGR+ +L + + +A + ++ ++ R L G + L +EW
Sbjct: 165 SDRFGRRRLLLVAYVSALVLGLVSAASVSYTMFAITRTLTGTALAGFTIIVMPLELEW 222
>ref|XP_003132165.1| PREDICTED: solute carrier family 22 member 13 [Sus scrofa].
Length = 586
Score = 121 bits (303), Expect = 7e-28
Identities = 73/251 (29%), Positives = 128/251 (50%)
Frame = +1
Query: 214 FQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDSAN 393
F ++L ++G GRFQ+ ++ L + + + ++ + F H C V + N T +
Sbjct: 4 FSEVLAEIGTFGRFQVQLLILLSVPNFLTAFYMFAQVFMVLDETHHCSVAWVKNQTLN-- 61
Query: 394 STGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGWVY 573
LS L +S+PLD+ PE C + P L + + + T+PC GWVY
Sbjct: 62 ----LSTAEQLALSVPLDAAGSPEPCLMFQPPP-DGASLEDILSHRFN-KTQPCKTGWVY 115
Query: 574 DRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCLLQ 753
S ++ +++L+C+ + LK ++ ++M G+LVG++I+G L D GRK+ + LL
Sbjct: 116 PEGRPRS-LMNEFNLVCDRKHLKETSQSVYMAGLLVGALIFGPLCDWIGRKITVLLQLLL 174
Query: 754 LAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICAAC 933
I AF P+F +Y +LRF + + L+ EW P ++ + +A C+
Sbjct: 175 FGILGLSTAFVPSFELYMALRFAVATAVAGYTFSNITLLTEWVGPSWRTRTVVVAQCSFS 234
Query: 934 MGQIILGGLAF 966
+GQ+ L GLA+
Sbjct: 235 VGQMALAGLAY 245
>ref|XP_003358414.1| PREDICTED: solute carrier family 22 member 13-like [Sus scrofa].
Length = 469
Score = 121 bits (303), Expect = 7e-28
Identities = 73/251 (29%), Positives = 128/251 (50%)
Frame = +1
Query: 214 FQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDSAN 393
F ++L ++G GRFQ+ ++ L + + + ++ + F H C V + N T +
Sbjct: 4 FSEVLAEIGTFGRFQVQLLILLSVPNFLTAFYMFAQVFMVLDETHHCSVAWVKNQTLN-- 61
Query: 394 STGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGWVY 573
LS L +S+PLD+ PE C + P L + + + T+PC GWVY
Sbjct: 62 ----LSTAEQLALSVPLDAAGSPEPCLMFQPPP-DGASLEDILSHRFN-KTQPCKTGWVY 115
Query: 574 DRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCLLQ 753
S ++ +++L+C+ + LK ++ ++M G+LVG++I+G L D GRK+ + LL
Sbjct: 116 PEGRPRS-LMNEFNLVCDRKHLKETSQSVYMAGLLVGALIFGPLCDWIGRKITVLLQLLL 174
Query: 754 LAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICAAC 933
I AF P+F +Y +LRF + + L+ EW P ++ + +A C+
Sbjct: 175 FGILGLSTAFVPSFELYMALRFAVATAVAGYTFSNITLLTEWVGPSWRTRTVVVAQCSFS 234
Query: 934 MGQIILGGLAF 966
+GQ+ L GLA+
Sbjct: 235 VGQMALAGLAY 245
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,659,904
Number of extensions: 678181
Number of successful extensions: 1991
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 1969
Number of HSP's successfully gapped: 19
Length of query: 322
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 223
Effective length of database: 8,879,129
Effective search space: 1980045767
Effective search space used: 1980045767
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009630
(968 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_659034.1| solute carrier family 22 (organic anion transpo... 350 7e-97
Alignment gi|NP_599017.1| solute carrier family 22, member 27 [Mus muscul... 347 1e-95
Alignment gi|NP_766364.1| solute carrier family 22. member 29 [Mus muscul... 344 7e-95
Alignment gi|NP_001013842.2| hypothetical protein LOC434674 [Mus musculus]. 340 1e-93
Alignment gi|NP_795976.1| integral membrane transport protein UST1R [Mus ... 338 4e-93
Alignment gi|NP_666344.1| solute carrier family 22 (organic cation transp... 332 3e-91
Alignment gi|NP_033229.3| solute carrier family 22 member 12 [Mus musculu... 251 6e-67
Alignment gi|NP_759010.1| prostaglandin-specific organic anion transporte... 219 3e-57
Alignment gi|NP_941052.1| solute carrier family 22 member 20 [Mus musculu... 202 2e-52
Alignment gi|NP_032792.2| solute carrier family 22 member 6 [Mus musculus]. 202 2e-52
>ref|NP_659034.1| solute carrier family 22 (organic anion transporter), member 9 [Mus
musculus].
Length = 551
Score = 350 bits (899), Expect = 7e-97
Identities = 164/253 (64%), Positives = 204/253 (80%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQDL+ Q+G LGRFQIL M+F+ I ++ PH LLENFTAA+P HRCWV ILDNDT S
Sbjct: 1 MAFQDLIIQIGSLGRFQILHMIFVLICHALSAPHTLLENFTAAIPSHRCWVPILDNDTAS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N + LSQD LLRISIPLDSNL+P+KCRRY+ PQW LLHLN TFP VT+ DTEPCVDGW
Sbjct: 61 DNGSRILSQDDLLRISIPLDSNLRPDKCRRYIQPQWHLLHLNGTFPTVTEPDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD+S F ST VT+WDL+C SQ+L SVAKF++M G+ +G I+ GHLSD+FGRKL+ L
Sbjct: 121 VYDQSTFLSTTVTQWDLVCGSQALNSVAKFIYMTGIFIGYIMGGHLSDKFGRKLIFTCSL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
L++AIT+TC AFAP+FLIYCSLRFL+G + ++ TN ++LI+EWT P+FQA+ M + A
Sbjct: 181 LKMAITETCVAFAPSFLIYCSLRFLSGIFSSTLRTNSALLILEWTSPKFQALVMALIFIA 240
Query: 928 ACMGQIILGGLAF 966
+ +GQ +LGGLAF
Sbjct: 241 SGVGQTLLGGLAF 253
>ref|NP_599017.1| solute carrier family 22, member 27 [Mus musculus].
Length = 551
Score = 347 bits (889), Expect = 1e-95
Identities = 167/253 (66%), Positives = 196/253 (77%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
M+FQ+LL+QVG LGRFQILQ+VFL + + I PHI +ENFTAA+P HRCWV ILDNDT S
Sbjct: 1 MSFQELLNQVGSLGRFQILQIVFLLLLNAIVVPHIAMENFTAAIPNHRCWVPILDNDTAS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N + LSQD LLRISIPLDSNL+PEKCRR+ PQW LLHLN TF NV++ DTEPCVDGW
Sbjct: 61 DNGSRILSQDDLLRISIPLDSNLRPEKCRRFAQPQWHLLHLNGTFSNVSEPDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS F STIVT+WDL+CESQ+L SV KF FM+G+ +G II GHLSDR GRK +L L
Sbjct: 121 VYDRSNFLSTIVTEWDLVCESQALNSVTKFSFMIGLFIGGIICGHLSDRLGRKFILTCAL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ AIT+TC AFAP+F IYCSLRFLAG S IL N +L++EWT P+F M + CA
Sbjct: 181 LQFAITETCVAFAPSFFIYCSLRFLAGLSVEPILVNSHLLMLEWTSPKFLTMMAALLSCA 240
Query: 928 ACMGQIILGGLAF 966
+G +I GLAF
Sbjct: 241 PNIGYMISAGLAF 253
>ref|NP_766364.1| solute carrier family 22. member 29 [Mus musculus].
Length = 551
Score = 344 bits (882), Expect = 7e-95
Identities = 167/253 (66%), Positives = 198/253 (78%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
M+FQ+LL+QVG LGRFQILQ+VFL + + I PHI +ENFTAA+P HRCWV ILDNDT S
Sbjct: 1 MSFQELLNQVGSLGRFQILQIVFLFLLNAIVVPHIGMENFTAAIPNHRCWVPILDNDTAS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N + LSQD LLRISIPLDSNL+ +KCRR+ PQW LLHLN TF NV++ DTEPCVDGW
Sbjct: 61 DNGSRILSQDDLLRISIPLDSNLRLDKCRRFAQPQWHLLHLNGTFSNVSEPDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS F STIVT+WDL+CESQ+L SV KF FM+G+ +G II GHLSDRFGRK +L L
Sbjct: 121 VYDRSNFLSTIVTEWDLVCESQALNSVTKFSFMIGLFIGGIICGHLSDRFGRKFILTCAL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ AIT+TC AFAP+F IYCSLRFLAG S I N +L++EWT P+F AM ++ CA
Sbjct: 181 LQFAITETCVAFAPSFFIYCSLRFLAGMSVEPISVNSHLLMLEWTSPKFLAMMAVLSSCA 240
Query: 928 ACMGQIILGGLAF 966
+G +IL GLAF
Sbjct: 241 PNIGFMILAGLAF 253
>ref|NP_001013842.2| hypothetical protein LOC434674 [Mus musculus].
Length = 552
Score = 340 bits (871), Expect = 1e-93
Identities = 165/253 (65%), Positives = 194/253 (76%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQ+LL+QVG LGRFQILQ+ F+ + PHI +ENFTAA+P HRCW ILDNDT S
Sbjct: 1 MAFQELLNQVGSLGRFQILQISFVLFLVGLVVPHITMENFTAAIPNHRCWAPILDNDTAS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N + LSQD LLRISIPLDSNL+ +KCRR+ PQW LLHLN TF N T+ DTEPCVDGW
Sbjct: 61 DNGSRILSQDDLLRISIPLDSNLRLDKCRRFAQPQWHLLHLNGTFSNETEPDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS F STIVT+WDL+CESQ+L SVAKF FM+G+ +G+II GHLSDRFGRK +L L
Sbjct: 121 VYDRSNFLSTIVTEWDLVCESQALNSVAKFSFMIGLFIGAIICGHLSDRFGRKFILTCAL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ AIT+TC AFAP+F IYC LRFLAG S I N ++LI+EWT P+F M + CA
Sbjct: 181 LQFAITETCVAFAPSFFIYCLLRFLAGMSVEPISVNSNLLILEWTNPKFLGMVAVLTSCA 240
Query: 928 ACMGQIILGGLAF 966
A +G +IL GLAF
Sbjct: 241 ASIGYMILAGLAF 253
>ref|NP_795976.1| integral membrane transport protein UST1R [Mus musculus].
Length = 552
Score = 338 bits (867), Expect = 4e-93
Identities = 164/253 (64%), Positives = 193/253 (76%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQ+LL+QVG LGRFQILQ+ F+ + PHI +ENFTAA+P HRCW ILDNDT S
Sbjct: 1 MAFQELLNQVGSLGRFQILQISFVLFLVGLVVPHITMENFTAAIPNHRCWAPILDNDTAS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N + LSQD LLRISIPLDSNL+ +KCRR+ PQW LLHLN TF N T+ DTEPCVDGW
Sbjct: 61 DNGSRILSQDDLLRISIPLDSNLRLDKCRRFAQPQWHLLHLNGTFSNETEPDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS F STIVT+WDL+CESQ+L SVAKF FM+G+ +G+II GHLSDRFGRK +L L
Sbjct: 121 VYDRSNFLSTIVTEWDLVCESQALNSVAKFSFMIGLFIGAIICGHLSDRFGRKFILTCAL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ AIT+TC AFAP+F IYC LRFLAG S I N +L++EWT P+F M + CA
Sbjct: 181 LQFAITETCVAFAPSFFIYCLLRFLAGMSVEPISVNSHLLMLEWTSPKFLGMVAVLTSCA 240
Query: 928 ACMGQIILGGLAF 966
A +G +IL GLAF
Sbjct: 241 ASIGYMILAGLAF 253
>ref|NP_666344.1| solute carrier family 22 (organic cation transporter), member 26
[Mus musculus].
Length = 552
Score = 332 bits (850), Expect = 3e-91
Identities = 157/253 (62%), Positives = 196/253 (77%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQDLL+ VG GRFQILQM FL I ++I PH++LENFTAA GHRCWVHI+DNDT+S
Sbjct: 1 MAFQDLLNLVGSHGRFQILQMAFLLICNVITMPHVILENFTAANLGHRCWVHIIDNDTNS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N++G LSQD LLRISIPLDSNL+PEKCRR++ PQW LL N +F N+T+ DTEPC+DGW
Sbjct: 61 NNNSGILSQDDLLRISIPLDSNLRPEKCRRFVQPQWHLLQFNGSFSNMTEPDTEPCMDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD+ F ST VT+W+L+C SQ L SVAKF+F++G+L G + GHLSD+FGRKL+ R L
Sbjct: 121 VYDQRTFLSTTVTEWNLVCGSQELNSVAKFIFLIGVLAGHFVGGHLSDKFGRKLLFRCAL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ+AIT TC A APTF IYC LRFL G + I TN +L++EWT P+ QA+ T+++ +
Sbjct: 181 LQMAITGTCTALAPTFFIYCLLRFLTGLCIIPINTNSVLLMLEWTSPKTQALVTTLSMSS 240
Query: 928 ACMGQIILGGLAF 966
G +IL GLAF
Sbjct: 241 HHFGGLILAGLAF 253
>ref|NP_033229.3| solute carrier family 22 member 12 [Mus musculus].
Length = 553
Score = 251 bits (641), Expect = 6e-67
Identities = 120/253 (47%), Positives = 163/253 (64%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF +LLD+VGGLGRFQ+ Q V L L +LENF+AAVP HRCWV +LDN T
Sbjct: 1 MAFPELLDRVGGLGRFQLFQTVALVTPILWVTTQNMLENFSAAVPHHRCWVPLLDNSTSQ 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
A+ G L D LL +SIP + +P +C R+ PQWQL N T N +D TEPC DGW
Sbjct: 61 ASIPGDLGPDVLLAVSIPPGPDQQPHQCLRFRQPQWQLTESNATATNWSDAATEPCEDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S F STIVT WDL+C SQ+L+ +A+ +F+ G+LVG+ + GH SDRFGR+ +L W
Sbjct: 121 VYDHSTFRSTIVTTWDLVCNSQALRPMAQSIFLAGILVGAAVCGHASDRFGRRRVLTWSY 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
L ++++ T AAF PTF +YC RFL + ++ N + L++EWT + + MT+
Sbjct: 181 LLVSVSGTAAAFMPTFPLYCLFRFLLASAVAGVMMNTASLLMEWTSAQGSPLVMTLNALG 240
Query: 928 ACMGQIILGGLAF 966
GQ++ G +A+
Sbjct: 241 FSFGQVLTGSVAY 253
>ref|NP_759010.1| prostaglandin-specific organic anion transporter [Mus musculus].
Length = 554
Score = 219 bits (558), Expect = 3e-57
Identities = 111/253 (43%), Positives = 158/253 (62%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
M F ++L VG GRFQI ++ L I SL+ PH +LENFTAA+P H C ++ LDN
Sbjct: 1 MDFDEILHHVGDSGRFQICMIILLNILSLVLSPHDVLENFTAAIPAHHCSIN-LDNSRSE 59
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
++ L+ + L+++SIP+ N KPE+CRR+ + QWQ L N + N T+L+TEPC+DGW
Sbjct: 60 VSTDMNLTTEDLMKVSIPMGPNQKPEQCRRFRYTQWQFLDSNISTFNSTELETEPCLDGW 119
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
YD S F+STIVT+WDL+C+ QS K A+ + G LV + G +SDRFGRK +L +C
Sbjct: 120 TYDHSVFTSTIVTEWDLVCDFQSFKYYAQATSLAGHLVSCPLSGIISDRFGRKPLLMYCS 179
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
L T AFAP F +YC LRFL +IL N +L++E ++ + ++
Sbjct: 180 LAYGAVGTYCAFAPNFSVYCVLRFLLSAFQSTILINSLILVLEEASVQWHPTIIVLSGLF 239
Query: 928 ACMGQIILGGLAF 966
+GQ +LGGLA+
Sbjct: 240 NSIGQGVLGGLAY 252
>ref|NP_941052.1| solute carrier family 22 member 20 [Mus musculus].
Length = 556
Score = 202 bits (515), Expect = 2e-52
Identities = 107/253 (42%), Positives = 152/253 (60%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLLD +GG+GRFQ++ L + + H L+NFTAA P H C H + +
Sbjct: 1 MAFTDLLDALGGVGRFQLVYTALLLLPCGLLACHTFLQNFTAAAPPHHCQ-HPANYTEPT 59
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N +G LR +IPL+ + PE CRRY+ PQW LL N + V TE C DGW
Sbjct: 60 TNVSGVW-----LRAAIPLNQHGDPEPCRRYVEPQWALLKPNASSHGVA---TEGCKDGW 111
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS F STIV +WDL+CE+++L+ +A+ ++M G+LVG+ ++G L+DR GRK L W
Sbjct: 112 VYDRSIFPSTIVMEWDLVCEARTLRDLAQSIYMSGVLVGAALFGGLADRLGRKAPLVWSY 171
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLA++ A+ +F YC RFL G + I+ N L+VEW R + + + +
Sbjct: 172 LQLAVSGAATAYVGSFSAYCVFRFLMGMTFSGIILNSLSLVVEWMPTRGRTVAGILLGFS 231
Query: 928 ACMGQIILGGLAF 966
+GQ+IL G+A+
Sbjct: 232 FTLGQLILAGVAY 244
>ref|NP_032792.2| solute carrier family 22 member 6 [Mus musculus].
Length = 545
Score = 202 bits (515), Expect = 2e-52
Identities = 106/253 (41%), Positives = 152/253 (60%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLL QVGG+GRFQ++Q+ + L+ H L+NFTAA+P H C
Sbjct: 1 MAFNDLLKQVGGVGRFQLIQVTMVVAPLLLMASHNTLQNFTAAIPAHHC----------R 50
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
+ LS+D L +PLD +PE C R+ P N T N T + TEPC+DGW
Sbjct: 51 PPANANLSKDGGLEAWLPLDKQGRPESCLRFPFPH------NGTEANGTGV-TEPCLDGW 103
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD S F STIVT+W+L+C ++ + +A+ LFMVG+L+G++++G+L+DR GR+ +L
Sbjct: 104 VYDNSTFPSTIVTEWNLVCSHRAFRQLAQSLFMVGVLLGAMMFGYLADRLGRRKVLILNY 163
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ A++ TCAA+AP + +YC R L+G S SI NC L +EW +A T+
Sbjct: 164 LQTAVSGTCAAYAPNYTVYCIFRLLSGMSLASIAINCMTLNMEWMPIHTRAYVGTLIGYV 223
Query: 928 ACMGQIILGGLAF 966
+GQ +L G+A+
Sbjct: 224 YSLGQFLLAGIAY 236
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,285,433
Number of extensions: 898172
Number of successful extensions: 2573
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 2551
Number of HSP's successfully gapped: 24
Length of query: 322
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 221
Effective length of database: 12,583,923
Effective search space: 2781046983
Effective search space used: 2781046983
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009630
(968 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_543142.2| solute carrier family 22 member 9 [Homo sapiens]. 378 e-105
Alignment gi|NP_955384.3| solute carrier family 22 member 25 [Homo sapien... 378 e-105
Alignment gi|NP_001034841.3| solute carrier family 22 member 10 [Homo sap... 370 e-103
Alignment gi|NP_001129978.2| solute carrier family 22 member 24 [Homo sap... 369 e-102
Alignment gi|NP_060954.1| solute carrier family 22 member 11 [Homo sapien... 275 6e-74
Alignment gi|NP_653186.2| solute carrier family 22 member 12 isoform a [H... 263 2e-70
Alignment gi|NP_695010.1| solute carrier family 22 member 6 isoform d [Ho... 214 9e-56
Alignment gi|NP_695009.1| solute carrier family 22 member 6 isoform c [Ho... 214 9e-56
Alignment gi|NP_695008.1| solute carrier family 22 member 6 isoform b [Ho... 214 9e-56
Alignment gi|NP_004781.2| solute carrier family 22 member 6 isoform a [Ho... 214 9e-56
>ref|NP_543142.2| solute carrier family 22 member 9 [Homo sapiens].
Length = 553
Score = 378 bits (971), Expect = e-105
Identities = 177/253 (69%), Positives = 207/253 (81%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQDLL G L RFQILQ VFL I ++ Y H +LENFTA +PGHRCWVHILDNDT S
Sbjct: 1 MAFQDLLGHAGDLWRFQILQTVFLSIFAVATYLHFMLENFTAFIPGHRCWVHILDNDTVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TG LSQDALLRISIPLDSN++PEKCRR++HPQWQLLHLN TFPN +D D EPCVDGW
Sbjct: 61 DNDTGALSQDALLRISIPLDSNMRPEKCRRFVHPQWQLLHLNGTFPNTSDADMEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDR +FSSTIVT+WDL+C+SQSL SVAKF+FM GM+VG I+ GHLSDRFGR+ +LRWC
Sbjct: 121 VYDRISFSSTIVTEWDLVCDSQSLTSVAKFVFMAGMMVGGILGGHLSDRFGRRFVLRWCY 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ+AI TCAA APTFLIYCSLRFL+G + MS++TN +LI EW RFQAMG+T+ +C
Sbjct: 181 LQVAIVGTCAALAPTFLIYCSLRFLSGIAAMSLITNTIMLIAEWATHRFQAMGITLGMCP 240
Query: 928 ACMGQIILGGLAF 966
+ + + L GLAF
Sbjct: 241 SGIAFMTLAGLAF 253
>ref|NP_955384.3| solute carrier family 22 member 25 [Homo sapiens].
Length = 547
Score = 378 bits (970), Expect = e-105
Identities = 180/253 (71%), Positives = 206/253 (81%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAFQDLLDQVGGLGRFQILQMVFL + ++I Y LENF A + HRCWVHILDNDT
Sbjct: 1 MAFQDLLDQVGGLGRFQILQMVFLIMFNVIVYHQTQLENFAAFILDHRCWVHILDNDTIP 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N GTLSQDALLRISIP DSNL+PEKCRR++HPQW+L+HLN TFPN ++ DTEPCVDGW
Sbjct: 61 DNDPGTLSQDALLRISIPFDSNLRPEKCRRFVHPQWKLIHLNGTFPNTSEPDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD+S+F STIVTKWDL+CESQ L SVAKFLFM GM+VG +YGHLSDRFGRK +LRW
Sbjct: 121 VYDQSSFPSTIVTKWDLVCESQPLNSVAKFLFMAGMMVGGNLYGHLSDRFGRKFVLRWSY 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI TCAAFAPT L+YCSLRFLAG +T SI+ N +LIVEW +F AM +T+ +CA
Sbjct: 181 LQLAIVGTCAAFAPTILVYCSLRFLAGAATFSIIVNTVLLIVEWITHQFCAMALTLTLCA 240
Query: 928 ACMGQIILGGLAF 966
A +G I LG LAF
Sbjct: 241 ASIGHITLGSLAF 253
>ref|NP_001034841.3| solute carrier family 22 member 10 [Homo sapiens].
Length = 541
Score = 370 bits (951), Expect = e-103
Identities = 174/253 (68%), Positives = 211/253 (83%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF++LL QVGGLGRFQ+L +VF+ S ++ PHILLENF AA+PGHRCWVH+LDN+T S
Sbjct: 1 MAFEELLSQVGGLGRFQMLHLVFILPSLMLLIPHILLENFAAAIPGHRCWVHMLDNNTGS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TG LS+DALLRISIPLDSNL+PEKCRR++HPQWQLLHLN T + ++ DTEPCVDGW
Sbjct: 61 GNETGILSEDALLRISIPLDSNLRPEKCRRFVHPQWQLLHLNGTIHSTSEADTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYD+S F STIVTKWDL+C+ QSLKSV +FL + GMLVG II GH+SDRFGR+ +LRWCL
Sbjct: 121 VYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCL 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAITDTCAAFAPTF +YC LRFLAGFS+M I++N S+ I EW P +A+ + ++ A
Sbjct: 181 LQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGA 240
Query: 928 ACMGQIILGGLAF 966
+GQIILGGLA+
Sbjct: 241 LSIGQIILGGLAY 253
>ref|NP_001129978.2| solute carrier family 22 member 24 [Homo sapiens].
Length = 552
Score = 369 bits (947), Expect = e-102
Identities = 169/253 (66%), Positives = 212/253 (83%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
M F LLDQVGG+GRFQI + F CI++++ +P+I+LENFTA P HRCWV +LDNDT S
Sbjct: 1 MGFDVLLDQVGGMGRFQICLIAFFCITNILLFPNIVLENFTAFTPSHRCWVPLLDNDTVS 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
N TGTLS+D LLRISIPLDSNL+P+KC+R++HPQWQLLHLN TFPN + DTEPCVDGW
Sbjct: 61 DNDTGTLSKDDLLRISIPLDSNLRPQKCQRFIHPQWQLLHLNGTFPNTNEPDTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS+F STIVT+WDL+CESQSLKS+ + LFM G L+G +IYGHLSDR GRK++ + C
Sbjct: 121 VYDRSSFLSTIVTEWDLVCESQSLKSMVQSLFMAGSLLGGLIYGHLSDRVGRKIICKLCF 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLAI++TCAAFAPTFL+YC LRFLAGFSTM+IL N +L +EWT+PR ++M + + +C+
Sbjct: 181 LQLAISNTCAAFAPTFLVYCILRFLAGFSTMTILGNTFILSLEWTLPRSRSMTIMVLLCS 240
Query: 928 ACMGQIILGGLAF 966
+GQ++LGGLAF
Sbjct: 241 YSVGQMLLGGLAF 253
>ref|NP_060954.1| solute carrier family 22 member 11 [Homo sapiens].
Length = 550
Score = 275 bits (702), Expect = 6e-74
Identities = 140/253 (55%), Positives = 173/253 (68%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF LL+Q GG+G FQ LQ++ + L+ +LLENF+AA+PGHRCW H+LDN S
Sbjct: 1 MAFSKLLEQAGGVGLFQTLQVLTFILPCLMIPSQMLLENFSAAIPGHRCWTHMLDNG--S 58
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
A ST ++ ALL ISIP N P +CRR+ PQWQLL N T + ++ DTEPCVDGW
Sbjct: 59 AVSTN-MTPKALLTISIPPGPNQGPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGW 117
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS F+STIV KWDL+C SQ LK +++ +FM G+LVGS I+G LS RFGRK ML WC
Sbjct: 118 VYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIFMSGILVGSFIWGLLSYRFGRKPMLSWCC 177
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQLA+ T FAPTF+IYC LRF+A F I + L+VEWT +A+ MT+ CA
Sbjct: 178 LQLAVAGTSTIFAPTFVIYCGLRFVAAFGMAGIFLSSLTLMVEWTTTSRRAVTMTVVGCA 237
Query: 928 ACMGQIILGGLAF 966
GQ LGGLAF
Sbjct: 238 FSAGQAALGGLAF 250
>ref|NP_653186.2| solute carrier family 22 member 12 isoform a [Homo sapiens].
Length = 553
Score = 263 bits (671), Expect = 2e-70
Identities = 125/253 (49%), Positives = 170/253 (67%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF +LLD VGGLGRFQ+LQ + L +S + +LENF+AAVP HRCW +LDN T
Sbjct: 1 MAFSELLDLVGGLGRFQVLQTMALMVSIMWLCTQSMLENFSAAVPSHRCWAPLLDNSTAQ 60
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
A+ G+LS +ALL ISIP N +P +CRR+ PQWQLL N T + ++ DTEPCVDGW
Sbjct: 61 ASILGSLSPEALLAISIPPGPNQRPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGW 120
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
VYDRS F+STIV KW+L+C+S +LK +A+ +++ G+LVG+ G SDRFGR+L+L W
Sbjct: 121 VYDRSIFTSTIVAKWNLVCDSHALKPMAQSIYLAGILVGAAACGPASDRFGRRLVLTWSY 180
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ+A+ T AAFAP F +YC RFL F+ ++ N L++EWT R + + MT+
Sbjct: 181 LQMAVMGTAAAFAPAFPVYCLFRFLLAFAVAGVMMNTGTLLMEWTAARARPLVMTLNSLG 240
Query: 928 ACMGQIILGGLAF 966
G + +A+
Sbjct: 241 FSFGHGLTAAVAY 253
>ref|NP_695010.1| solute carrier family 22 member 6 isoform d [Homo sapiens].
Length = 519
Score = 214 bits (545), Expect = 9e-56
Identities = 110/253 (43%), Positives = 155/253 (61%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLL QVGG+GRFQ +Q+ + + L+ H L+NFTAA+P H C
Sbjct: 1 MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHC----------R 50
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
+ LS++ L + +P D +PE C R+ PQW L LN T N T TEPC DGW
Sbjct: 51 PPADANLSKNGGLEVWLPRDRQGQPESCLRFTSPQWGLPFLNGTEANGTGA-TEPCTDGW 109
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
+YD S F STIVT+WDL+C ++L+ +A+ L+MVG+L+G++++G+L+DR GR+ +L
Sbjct: 110 IYDNSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKVLILNY 169
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ A++ TCAAFAP F IYC+ R L+G + I NC L VEW +A T+
Sbjct: 170 LQTAVSGTCAAFAPNFPIYCAFRLLSGMALAGISLNCMTLNVEWMPIHTRACVGTLIGYV 229
Query: 928 ACMGQIILGGLAF 966
+GQ +L G+A+
Sbjct: 230 YSLGQFLLAGVAY 242
>ref|NP_695009.1| solute carrier family 22 member 6 isoform c [Homo sapiens].
Length = 506
Score = 214 bits (545), Expect = 9e-56
Identities = 110/253 (43%), Positives = 155/253 (61%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLL QVGG+GRFQ +Q+ + + L+ H L+NFTAA+P H C
Sbjct: 1 MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHC----------R 50
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
+ LS++ L + +P D +PE C R+ PQW L LN T N T TEPC DGW
Sbjct: 51 PPADANLSKNGGLEVWLPRDRQGQPESCLRFTSPQWGLPFLNGTEANGTGA-TEPCTDGW 109
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
+YD S F STIVT+WDL+C ++L+ +A+ L+MVG+L+G++++G+L+DR GR+ +L
Sbjct: 110 IYDNSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKVLILNY 169
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ A++ TCAAFAP F IYC+ R L+G + I NC L VEW +A T+
Sbjct: 170 LQTAVSGTCAAFAPNFPIYCAFRLLSGMALAGISLNCMTLNVEWMPIHTRACVGTLIGYV 229
Query: 928 ACMGQIILGGLAF 966
+GQ +L G+A+
Sbjct: 230 YSLGQFLLAGVAY 242
>ref|NP_695008.1| solute carrier family 22 member 6 isoform b [Homo sapiens].
Length = 550
Score = 214 bits (545), Expect = 9e-56
Identities = 110/253 (43%), Positives = 155/253 (61%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLL QVGG+GRFQ +Q+ + + L+ H L+NFTAA+P H C
Sbjct: 1 MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHC----------R 50
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
+ LS++ L + +P D +PE C R+ PQW L LN T N T TEPC DGW
Sbjct: 51 PPADANLSKNGGLEVWLPRDRQGQPESCLRFTSPQWGLPFLNGTEANGTGA-TEPCTDGW 109
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
+YD S F STIVT+WDL+C ++L+ +A+ L+MVG+L+G++++G+L+DR GR+ +L
Sbjct: 110 IYDNSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKVLILNY 169
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ A++ TCAAFAP F IYC+ R L+G + I NC L VEW +A T+
Sbjct: 170 LQTAVSGTCAAFAPNFPIYCAFRLLSGMALAGISLNCMTLNVEWMPIHTRACVGTLIGYV 229
Query: 928 ACMGQIILGGLAF 966
+GQ +L G+A+
Sbjct: 230 YSLGQFLLAGVAY 242
>ref|NP_004781.2| solute carrier family 22 member 6 isoform a [Homo sapiens].
Length = 563
Score = 214 bits (545), Expect = 9e-56
Identities = 110/253 (43%), Positives = 155/253 (61%)
Frame = +1
Query: 208 MAFQDLLDQVGGLGRFQILQMVFLCISSLIAYPHILLENFTAAVPGHRCWVHILDNDTDS 387
MAF DLL QVGG+GRFQ +Q+ + + L+ H L+NFTAA+P H C
Sbjct: 1 MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHC----------R 50
Query: 388 ANSTGTLSQDALLRISIPLDSNLKPEKCRRYLHPQWQLLHLNETFPNVTDLDTEPCVDGW 567
+ LS++ L + +P D +PE C R+ PQW L LN T N T TEPC DGW
Sbjct: 51 PPADANLSKNGGLEVWLPRDRQGQPESCLRFTSPQWGLPFLNGTEANGTGA-TEPCTDGW 109
Query: 568 VYDRSAFSSTIVTKWDLICESQSLKSVAKFLFMVGMLVGSIIYGHLSDRFGRKLMLRWCL 747
+YD S F STIVT+WDL+C ++L+ +A+ L+MVG+L+G++++G+L+DR GR+ +L
Sbjct: 110 IYDNSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKVLILNY 169
Query: 748 LQLAITDTCAAFAPTFLIYCSLRFLAGFSTMSILTNCSVLIVEWTVPRFQAMGMTMAICA 927
LQ A++ TCAAFAP F IYC+ R L+G + I NC L VEW +A T+
Sbjct: 170 LQTAVSGTCAAFAPNFPIYCAFRLLSGMALAGISLNCMTLNVEWMPIHTRACVGTLIGYV 229
Query: 928 ACMGQIILGGLAF 966
+GQ +L G+A+
Sbjct: 230 YSLGQFLLAGVAY 242
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,254,248
Number of extensions: 1070580
Number of successful extensions: 3220
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 3183
Number of HSP's successfully gapped: 27
Length of query: 322
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 219
Effective length of database: 14,901,872
Effective search space: 3263509968
Effective search space used: 3263509968
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-009630
(968 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL894191.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 494 e-137
Sscrofa_Chr02 329 2e-87
Sscrofa_Chr10 103 2e-19
gb|GL894575.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 90 3e-15
>gb|GL894191.1| Sus scrofa unplaced genomic scaffold chrU_scaffold2881
Length = 26409
Score = 494 bits (249), Expect = e-137
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 ccgttggccatctgatgctcaaacaagttggaagactagctcccatggccttgccgtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23840 ccgttggccatctgatgctcaaacaagttggaagactagctcccatggccttgccgtgga 23781
Query: 61 ggtgagacggggcccatcgagttaacgctaggatcaggatcaatacacacctagcgtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23780 ggtgagacggggcccatcgagttaacgctaggatcaggatcaatacacacctagcgtgta 23721
Query: 121 acatagtgaaaggaaaccttttctccctgtgaacttttctagatacagttattttgcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23720 acatagtgaaaggaaaccttttctccctgtgaacttttctagatacagttattttgcctc 23661
Query: 181 ctcttgaggatcatctgttcagcttcgatggcctttcaggacctcctggatcaagtggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23660 ctcttgaggatcatctgttcagcttcgatggcctttcaggacctcctggatcaagtggga 23601
Query: 241 ggcctagga 249
|||||||||
Sbjct: 23600 ggcctagga 23592
Score = 313 bits (158), Expect = 1e-82
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 711 caggtttgggaggaagttaatgctcaggtggtgcttgctccagctcgccatcactgacac 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13613 caggtttgggaggaagttaatgctcaggtggtgcttgctccagctcgccatcactgacac 13554
Query: 771 ctgcgcagcctttgctcccaccttcctcatttactgctcgctgcgctttttggctgggtt 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13553 ctgcgcagcctttgctcccaccttcctcatttactgctcgctgcgctttttggctgggtt 13494
Query: 831 ttccaccatgagcatcctgacaaactgttctgtgctta 868
||||||||||||||||||||||||||||||||||||||
Sbjct: 13493 ttccaccatgagcatcctgacaaactgttctgtgctta 13456
Score = 214 bits (108), Expect = 7e-53
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 608 agtgggacctgatatgtgaatctcagtcactaaaatcagtggccaaattcttattcatgg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22742 agtgggacctgatatgtgaatctcagtcactaaaatcagtggccaaattcttattcatgg 22683
Query: 668 ttggaatgctggtgggaagcatcatatatggccatttgtcagacaggt 715
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22682 ttggaatgctggtgggaagcatcatatatggccatttgtcagacaggt 22635
Score = 194 bits (98), Expect = 6e-47
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 869 ttgtagaatggacagtgccccgattccaagccatgggaatgacgatggccatctgtgctg 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13353 ttgtagaatggacagtgccccgattccaagccatgggaatgacgatggccatctgtgctg 13294
Query: 929 cttgtatgggacagatcatcctgggaggactggctttt 966
||||||||||||||||||||||||||||||||||||||
Sbjct: 13293 cttgtatgggacagatcatcctgggaggactggctttt 13256
Score = 135 bits (68), Expect = 5e-29
Identities = 71/72 (98%)
Strand = Plus / Minus
Query: 538 ctggacacagagccctgtgtggacggctgggtgtatgaccgaagcgccttctcctccacc 597
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23491 ctggacacggagccctgtgtggacggctgggtgtatgaccgaagcgccttctcctccacc 23432
Query: 598 attgtgactaag 609
||||||||||||
Sbjct: 23431 attgtgactaag 23420
>Sscrofa_Chr02
|| Length = 162569375
Score = 329 bits (166), Expect = 2e-87
Identities = 259/290 (89%)
Strand = Plus / Minus
Query: 317 tggagaacttcacggcagctgtccctggccatcgctgctgggtccacatccttgacaatg 376
||||||||||||| || || | ||||| ||||| |||||||||||||| || |||||||
Sbjct: 7939198 tggagaacttcacagcggccattcctggtcatcgttgctgggtccacattctcgacaatg 7939139
Query: 377 acactgactctgctaatagcactgggaccctcagccaagatgccctcctgagaatctcca 436
||||| |||| |||| ||||||||||||| ||| |||| |||||||||||||| ||
Sbjct: 7939138 acactatgtctgataatgccactgggaccctcggccctgatgtcctcctgagaatctaca 7939079
Query: 437 tccccctggactcaaacttgaagccggagaagtgtcgtcgctacctccacccccagtggc 496
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7939078 tccccctggactcaaacttgaagccggagaagtgtcgtcgcttcctccacccccagtggc 7939019
Query: 497 agctccttcacctgaatgagaccttccccaacgtgactgacctggacacagagccctgtg 556
||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 7939018 agctccttcacctgagtggaaccttccccaacgtgactgatctggacacggagccctgtg 7938959
Query: 557 tggacggctgggtgtatgaccgaagcgccttctcctccaccattgtgact 606
||||||||||||||||||| | |||| ||||||||||||||| ||||||
Sbjct: 7938958 tggacggctgggtgtatgatcaaagcttcttctcctccaccatcgtgact 7938909
Score = 321 bits (162), Expect = 4e-85
Identities = 258/290 (88%)
Strand = Plus / Minus
Query: 317 tggagaacttcacggcagctgtccctggccatcgctgctgggtccacatccttgacaatg 376
||||||| ||||| ||||| | |||| |||||||||||||||||||||||||| ||||
Sbjct: 7976213 tggagaatttcactgcagccattcctgctcatcgctgctgggtccacatccttgataatg 7976154
Query: 377 acactgactctgctaatagcactgggaccctcagccaagatgccctcctgagaatctcca 436
|||||| ||||| ||| | || ||||| ||||||| |||| ||||||||||||||||
Sbjct: 7976153 acactgtctctgataacaatacagggactctcagccctgatgttctcctgagaatctcca 7976094
Query: 437 tccccctggactcaaacttgaagccggagaagtgtcgtcgctacctccacccccagtggc 496
|||||||||||||||||||||| || ||||| |||| ||||| ||||||| |||||||||
Sbjct: 7976093 tccccctggactcaaacttgaaacctgagaaatgtcatcgcttcctccactcccagtggc 7976034
Query: 497 agctccttcacctgaatgagaccttccccaacgtgactgacctggacacagagccctgtg 556
|||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 7976033 agctccttcacctgaatggaaccttccccaatgtgactgacctggacacggagccctgtg 7975974
Query: 557 tggacggctgggtgtatgaccgaagcgccttctcctccaccattgtgact 606
|||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 7975973 tggacggctgggtgtatgaccgaagctccttctcctccacaatcgtgact 7975924
Score = 321 bits (162), Expect = 4e-85
Identities = 258/290 (88%)
Strand = Plus / Minus
Query: 317 tggagaacttcacggcagctgtccctggccatcgctgctgggtccacatccttgacaatg 376
||||||| ||||| ||||| | |||| |||||||||||||||||||||||||| ||||
Sbjct: 8016028 tggagaatttcactgcagccattcctgctcatcgctgctgggtccacatccttgataatg 8015969
Query: 377 acactgactctgctaatagcactgggaccctcagccaagatgccctcctgagaatctcca 436
|||||| ||||| ||| || ||||| ||||||| |||| ||||||||||||||||
Sbjct: 8015968 acactgtctctgataacgatacagggactctcagccctgatgttctcctgagaatctcca 8015909
Query: 437 tccccctggactcaaacttgaagccggagaagtgtcgtcgctacctccacccccagtggc 496
|||||||||||||||||||||| || ||||| |||| ||||| |||||||||||||||||
Sbjct: 8015908 tccccctggactcaaacttgaaacctgagaaatgtcatcgcttcctccacccccagtggc 8015849
Query: 497 agctccttcacctgaatgagaccttccccaacgtgactgacctggacacagagccctgtg 556
|||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 8015848 agctccttcacctgaatggaaccttccccaatgtgactgacctggacacggagccctgtg 8015789
Query: 557 tggacggctgggtgtatgaccgaagcgccttctcctccaccattgtgact 606
|||||||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 8015788 tggacggctgggtgtatgaccgaagctccttctcctccacaatcgtgact 8015739
Score = 315 bits (159), Expect = 2e-83
Identities = 240/267 (89%)
Strand = Plus / Minus
Query: 340 cctggccatcgctgctgggtccacatccttgacaatgacactgactctgctaatagcact 399
||||| |||| ||||||||||| |||||| ||||||||||||||||||| |||| ||
Sbjct: 8045868 cctggtcatcactgctgggtccgcatcctcgacaatgacactgactctggtaatgacatg 8045809
Query: 400 gggaccctcagccaagatgccctcctgagaatctccatccccctggactcaaacttgaag 459
||||||||| ||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 8045808 gggaccctcggccccgaggttctcctgagaatctccatccccctggactcaaacttgaag 8045749
Query: 460 ccggagaagtgtcgtcgctacctccacccccagtggcagctccttcacctgaatgagacc 519
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8045748 ccagagaaatgtcggcgctacctccacccccagtggcagctccttcacctgaatggaacc 8045689
Query: 520 ttccccaacgtgactgacctggacacagagccctgtgtggacggctgggtgtatgaccga 579
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 8045688 ttccccaacgtgactgatctggacacggagccctgtgtggacggctgggtgtatgaccaa 8045629
Query: 580 agcgccttctcctccaccattgtgact 606
||| |||||||| |||||| ||||||
Sbjct: 8045628 agctccttctcccacaccatcgtgact 8045602
Score = 93.7 bits (47), Expect = 2e-16
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 712 aggtttgggaggaagttaatgctcaggtggtgcttgctccagctcgccatcactgacacc 771
||||||||| | ||| | || ||||||||||| |||||||||||||||||| ||| |||
Sbjct: 7960641 aggtttgggcgaaaggtgattctcaggtggtgtttgctccagctcgccatctctgggacc 7960582
Query: 772 tgcgcagcctttgctcccaccttcctcatttactgctcgctgcgctt 818
|| ||||||||||| |||| ||||||| |||||||||| || |||||
Sbjct: 7960581 tgtgcagcctttgcccccaacttcctcctttactgctctctacgctt 7960535
Score = 85.7 bits (43), Expect = 4e-14
Identities = 91/107 (85%)
Strand = Plus / Minus
Query: 712 aggtttgggaggaagttaatgctcaggtggtgcttgctccagctcgccatcactgacacc 771
||||||||| | ||| | || ||||||||||| |||||||||||||||||| ||| |||
Sbjct: 8010217 aggtttgggcgaaaggtgattctcaggtggtgtttgctccagctcgccatctctgggacc 8010158
Query: 772 tgcgcagcctttgctcccaccttcctcatttactgctcgctgcgctt 818
|| ||||||||||| |||| ||||||| |||| ||||| || |||||
Sbjct: 8010157 tgtgcagcctttgcccccaacttcctcctttattgctctctacgctt 8010111
Score = 81.8 bits (41), Expect = 6e-13
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 724 aagttaatgctcaggtggtgcttgctccagctcgccatcactgacacctgcgcagccttt 783
||||| || ||||||||||| |||||||||||||||||| ||| ||||| |||||||||
Sbjct: 8039881 aagttgattctcaggtggtgtttgctccagctcgccatctctgggacctgtgcagccttt 8039822
Query: 784 gctcccaccttcctcatttactgct 808
|| || | ||||||| |||||||||
Sbjct: 8039821 gcccctaacttcctcgtttactgct 8039797
Score = 77.8 bits (39), Expect = 1e-11
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 724 aagttaatgctcaggtggtgcttgctccagctcgccatcactgacacctgcgcagccttt 783
||||| || ||||| ||||| ||||| ||||| |||||| ||| ||||| ||||||||
Sbjct: 7928395 aagttgattctcagatggtgtttgcttcagcttgccatctctgggacctgtacagccttt 7928336
Query: 784 gctcccaccttcctcatttactg 806
|||||||||||||||||||||||
Sbjct: 7928335 gctcccaccttcctcatttactg 7928313
Score = 63.9 bits (32), Expect = 2e-07
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 640 aaatcagtggccaaattcttattcatggttggaatgctggtgggaagcatcatatatggc 699
||||||||||| | ||| ||||| ||| ||||||| |||||||| || |||||||||||
Sbjct: 7938181 aaatcagtggctcagttcctattcttggctggaatgttggtgggaggcctcatatatggc 7938122
Query: 700 catttgtcagacaggt 715
|| || ||||||||||
Sbjct: 7938121 cacttctcagacaggt 7938106
>Sscrofa_Chr10
|| Length = 79102373
Score = 103 bits (52), Expect = 2e-19
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 527 acgtgactgacctggacacagagccctgtgtggacggctgggtgtatgaccgaagcgcct 586
|||||||||| |||||||| ||||||||||||||||||||||||||||| | |||| ||
Sbjct: 9826090 acgtgactgatctggacacggagccctgtgtggacggctgggtgtatgatcaaagcttct 9826031
Query: 587 tctcctccaccattgtgact 606
||||||||||||| ||||||
Sbjct: 9826030 tctcctccaccatcgtgact 9826011
>gb|GL894575.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3226
Length = 12871
Score = 89.7 bits (45), Expect = 3e-15
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 317 tggagaacttcacggcagctgtccctggccatcgctgctgggtccacatccttgacaatg 376
||||||||||||| || || | ||||| ||||| |||||||||||||| || |||||||
Sbjct: 4457 tggagaacttcacagcggccattcctggtcatcgttgctgggtccacattctcgacaatg 4398
Query: 377 acactgactctgctaatagcactgggaccctcagccaagatgccctcctgagaatct 433
||||| |||| |||| ||||||||||||||||| |||| ||||||||||||||
Sbjct: 4397 acactatgtctgataatgccactgggaccctcagccctgatgtcctcctgagaatct 4341
Score = 71.9 bits (36), Expect = 6e-10
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 551 cctgtgtggacggctgggtgtatgaccgaagcgccttctcctccaccattgtgact 606
||||||||||||||||||||||||| | |||| ||||||||||||||| ||||||
Sbjct: 4239 cctgtgtggacggctgggtgtatgatcaaagcttcttctcctccaccatcgtgact 4184
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 27,992,289
Number of extensions: 162
Number of successful extensions: 162
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 17
Length of query: 968
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 947
Effective length of database: 2,808,413,156
Effective search space: 2659567258732
Effective search space used: 2659567258732
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)