Animal-Genome cDNA 20110601C-009777

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-009777
         (1058 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001099115.1| coatomer subunit alpha [Bos taurus].              659   0.0  
Alignment   gi|NP_776706.2| coatomer subunit beta' [Bos taurus].                 189   3e-48
Alignment   gi|XP_002702344.1| PREDICTED: coatomer subunit beta-like [Bos t...   189   3e-48
Alignment   gi|NP_777088.1| platelet-activating factor acetylhydrolase IB s...   114   1e-25
Alignment   gi|NP_001033649.1| POC1 centriolar protein homolog A [Bos tauru...   110   2e-24
Alignment   gi|NP_001069398.1| WD repeat-containing protein 69 [Bos taurus].     110   3e-24
Alignment   gi|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus].      106   3e-23
Alignment   gi|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus].    103   2e-22
Alignment   gi|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partia...   103   2e-22
Alignment   gi|NP_001157418.1| WD repeat-containing protein 38 [Bos taurus].     103   3e-22

>ref|NP_001099115.1| coatomer subunit alpha [Bos taurus].
          Length = 1224

 Score =  659 bits (1700), Expect = 0.0
 Identities = 309/317 (97%), Positives = 311/317 (98%)
 Frame = +3

Query: 96   MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
            MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
Sbjct: 1    MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60

Query: 276  KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
Sbjct: 61   KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120

Query: 456  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 635
            NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
Sbjct: 121  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180

Query: 636  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 815
            VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
Sbjct: 181  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240

Query: 816  EVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAH 995
            EVDTCRGHYNNVSCAVFHPRQELILS S+DKSIRVWDMSK+TGVQTFRRDHD FWVLAAH
Sbjct: 241  EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300

Query: 996  PTFNLLAARHDGGMIVF 1046
            P  NL AA HDGGMIVF
Sbjct: 301  PNLNLFAAGHDGGMIVF 317


>ref|NP_776706.2| coatomer subunit beta' [Bos taurus].
          Length = 906

 Score =  189 bits (481), Expect = 3e-48
 Identities = 109/317 (34%), Positives = 161/317 (50%), Gaps = 4/317 (1%)
 Frame = +3

Query: 105  KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 10   KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69

Query: 285  PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 70   NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129

Query: 465  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 638
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 130  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177

Query: 639  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 812
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 178  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 221

Query: 813  WEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAA 992
              V T  GH  NVSCA FHP   +I++ S+D ++R+W  S      T     +  W +A+
Sbjct: 222  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 279

Query: 993  HPTFNLLAARHDGGMIV 1043
                N +A  +D G I+
Sbjct: 280  LRGSNNVALGYDEGSII 296


>ref|XP_002702344.1| PREDICTED: coatomer subunit beta-like [Bos taurus].
          Length = 737

 Score =  189 bits (481), Expect = 3e-48
 Identities = 109/317 (34%), Positives = 161/317 (50%), Gaps = 4/317 (1%)
 Frame = +3

Query: 105  KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 10   KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69

Query: 285  PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 70   NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129

Query: 465  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 638
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 130  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177

Query: 639  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 812
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 178  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 221

Query: 813  WEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAA 992
              V T  GH  NVSCA FHP   +I++ S+D ++R+W  S      T     +  W +A+
Sbjct: 222  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 279

Query: 993  HPTFNLLAARHDGGMIV 1043
                N +A  +D G I+
Sbjct: 280  LRGSNNVALGYDEGSII 296


>ref|NP_777088.1| platelet-activating factor acetylhydrolase IB subunit alpha [Bos
           taurus].
          Length = 410

 Score =  114 bits (286), Expect = 1e-25
 Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 34/279 (12%)
 Frame = +3

Query: 243 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
           H  PV  + FH    + VS  +D  IKVW+Y+      TL GH D +    F H    + 
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLA 166

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI----- 587
           S S D TI++W++Q   C+  + GH+H V      P+ D +VSAS D+T+++W++     
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226

Query: 588 ----SGLRK-----KNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 740
               +G R+     +    G + +       V ++       K  L  H+  V   ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286

Query: 741 TM--------------------PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                                 P ++SG+ D+ +K+W ++      + T  GH N V   
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344

Query: 861 VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHF 977
           +FH   + ILS +DDK++RVWD   +  ++T    H+HF
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382



 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = +3

Query: 276 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
           K  P  +SG  D  IK+W+     CL TL+GH +++R   FH    +ILS +DD+T+RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 456 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 584
           +++++ C+  L  H H+V    FH +   VV+ S+DQTV+VW+
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408



 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
 Frame = +3

Query: 354 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 533
           + L GH   +    FH  +  ++SAS+D TI+VW++++      L GH   V    F  S
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHS 161

Query: 534 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 713
             L+ S S D T+++WD  G                                  + GHD 
Sbjct: 162 GKLLASCSADMTIKLWDFQGFE----------------------------CIRTMHGHDH 193

Query: 714 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE--LI 887
            V+  A  P    IVS + D+ +K+W +     + V T  GH   V   +  P Q+  LI
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWV--RMVRPNQDGTLI 249

Query: 888 LSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
            S S+D+++RVW ++ +   +   R+H+H
Sbjct: 250 ASCSNDQTVRVWVVATKE-CKAELREHEH 277



 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = +3

Query: 159 PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
           P++L+   +  I++WD      +     HD  VRG+ FH      +S  DD  ++VW+YK
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368

Query: 339 LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            +RC+ TL  H  ++ +  FH   P++++ S DQT++VW
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%)
 Frame = +3

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
           K+ L GH   V    FHP   ++VS ++D  +K+W   E+  +E  T +GH ++V    F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVEDISF 158

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
               +L+ S S D +I++WD      ++T    HDH
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDH 193


>ref|NP_001033649.1| POC1 centriolar protein homolog A [Bos taurus].
          Length = 407

 Score =  110 bits (276), Expect = 2e-24
 Identities = 70/273 (25%), Positives = 120/273 (43%)
 Frame = +3

Query: 105 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
           +F      V  ++F P    + +   +  +++W   +      F  H   VR + F    
Sbjct: 56  RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115

Query: 285 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
             FV+  DD  +KVW+   ++ LF+L  H++++R   F  +   I+SASDD+T+++W+  
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175

Query: 465 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG 644
           SR CV     H  +V    FHPS   + +A +D TV+VWD+                   
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR------------------ 217

Query: 645 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVD 824
                    T  +++H  + H   VN  +FHP+   +V+ + D  +KI  + E +   + 
Sbjct: 218 ---------THRLLQHY-QLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRL--LY 265

Query: 825 TCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
           T  GH    +   F    E   S   D+ + VW
Sbjct: 266 TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 4/287 (1%)
 Frame = +3

Query: 81  PETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVR 260
           PE   +   F+     V  + F      + +   +  + +W  +  T   +F  H   V 
Sbjct: 6   PEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVT 65

Query: 261 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 440
            ++F     L  SG  D  +++W   ++        H   +R+  F  +    ++ASDD+
Sbjct: 66  CVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK 125

Query: 441 TIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 620
           T++VW+   +  +  L+ H ++V CA+F P   L+VSAS D+TV++WD            
Sbjct: 126 TVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD------------ 173

Query: 621 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 800
                            T     H    H   V +  FHP+   I +   D  VK+W + 
Sbjct: 174 ----------------KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217

Query: 801 ESKAWEVDTCRGHYNNVSCAV----FHPRQELILSYSDDKSIRVWDM 929
             +  +      HY   S AV    FHP    +++ S D ++++ D+
Sbjct: 218 THRLLQ------HYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258



 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 59/218 (27%), Positives = 89/218 (40%)
 Frame = +3

Query: 366  GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLV 545
            GH D + +  F      + S S D  + VW+ + +T      GH   V C  F PS  L+
Sbjct: 17   GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76

Query: 546  VSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNW 725
             S S D+TVR+W                  V  + G             V   H   V  
Sbjct: 77   ASGSRDKTVRIW------------------VPNVKGEST----------VFRAHTATVRS 108

Query: 726  AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDD 905
              F       V+ +DD+ VK+W  +  K   + +   H N V CA F P   LI+S SDD
Sbjct: 109  VHFCSDGQSFVTASDDKTVKVWSTHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDD 166

Query: 906  KSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            K++++WD + +  V ++         +  HP+   +AA
Sbjct: 167  KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAA 204



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 24/81 (29%), Positives = 40/81 (49%)
 Frame = +3

Query: 87  TGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 266
           T  +L  ++  SA V  LSFHP   +++T+  +  +++ D     L+     H GP   +
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277

Query: 267 DFHKQQPLFVSGGDDYKIKVW 329
            F +    F SGG D ++ VW
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW 298


>ref|NP_001069398.1| WD repeat-containing protein 69 [Bos taurus].
          Length = 415

 Score =  110 bits (274), Expect = 3e-24
 Identities = 67/280 (23%), Positives = 129/280 (46%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRG 263
           ETG     F   +A +  LSF+P+   + T   +   +LWD +    +     H   +  
Sbjct: 165 ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIIS 224

Query: 264 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT 443
           + F+      ++G  D+ + VW     R ++TL+GH   I +  F+ +   IL+ S D+T
Sbjct: 225 LSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKT 284

Query: 444 IRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGA 623
            ++W+  +  CV  LTGH+  ++ + F  +  L+ +AS D T R++  +           
Sbjct: 285 CKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA----------- 333

Query: 624 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 803
                          T + V K  LEGH+  ++  +F+P    +++G+ D+  +IW    
Sbjct: 334 ---------------TRECVTK--LEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376

Query: 804 SKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
            +  +V    GH + +    F+ + ++I++ S D + R+W
Sbjct: 377 GQCLQV--LEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414



 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 2/271 (0%)
 Frame = +3

Query: 243  HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY-PWI 419
            H  P+  +  +K    F++G  D   K+W+      L TL GH + +    F++ Y   I
Sbjct: 91   HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150

Query: 420  LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR 599
             + S D+T ++W+ ++  C     GH   ++C  F+P   LV + S+D T ++WDI    
Sbjct: 151  ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ--- 207

Query: 600  KKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQ 779
                            +G ++F          L GH   +   +F+ +   I++G+ D  
Sbjct: 208  ----------------SGEEVF---------TLTGHSAEIISLSFNTSGNRIITGSFDHT 242

Query: 780  VKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFR 959
            V +W  +  +  +V T  GH   +S AVF+    LIL+ S DK+ ++WD      V T  
Sbjct: 243  VTVWEADTGR--KVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLT 300

Query: 960  RDHDHFWVLAAHPTFNLLA-ARHDGGMIVFN 1049
               D         T  L+A A  DG   +F+
Sbjct: 301  GHDDEILDSCFDYTGKLIATASADGTARIFS 331



 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 71/274 (25%), Positives = 115/274 (41%), Gaps = 15/274 (5%)
 Frame = +3

Query: 168 LTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ-PLFVSGGDDYKIKVWNYKLR 344
           +T  ++   +LWD      +   + H   V  I F+        +G  D   K+W+ +  
Sbjct: 108 ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167

Query: 345 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQF 524
           +C  T  GH   I    F+ +   + + S D T ++W+ QS   V  LTGH+  ++   F
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSF 227

Query: 525 HPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVK- 689
           + S + +++ S D TV VW+    RK     G        +   D    L G+ D   K 
Sbjct: 228 NTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKL 287

Query: 690 ---------HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 842
                      L GHD  +  + F  T  LI + + D   +I+     +   V    GH 
Sbjct: 288 WDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATREC--VTKLEGHE 345

Query: 843 NNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTG 944
             +S   F+P+   +L+ S DK+ R+WD   QTG
Sbjct: 346 GEISKISFNPQGNRLLTGSSDKTARIWD--AQTG 377



 Score = 68.9 bits (167), Expect = 7e-12
 Identities = 42/168 (25%), Positives = 72/168 (42%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV 257
           E +TG  +       A +    F+     ILT   +   +LWD      +     HD  +
Sbjct: 247 EADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEI 306

Query: 258 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDD 437
               F     L  +   D   ++++   R C+  L GH   I    F+ +   +L+ S D
Sbjct: 307 LDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSD 366

Query: 438 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 581
           +T R+W+ Q+  C+ VL GH   +    F+   D++++ S D T R+W
Sbjct: 367 KTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414


>ref|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus].
          Length = 334

 Score =  106 bits (265), Expect = 3e-23
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 3/300 (1%)
 Frame = +3

Query: 129  VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
            V  + F P   W+ +S  + +I++W             H   +  + +     L VS  D
Sbjct: 48   VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107

Query: 309  DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
            D  +K+W+    +CL TL GH +Y+    F+ +   I+S S D+++R+W+ ++  C+  L
Sbjct: 108  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167

Query: 489  TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
              H+  V    F+    L+VS+S D   R+WD +                          
Sbjct: 168  PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-------------------------- 201

Query: 669  TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             +   +K +++  +  V++  F P    I++   D  +K+W  ++ K   + T  GH N 
Sbjct: 202  -SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNE 258

Query: 849  VSCAVFH---PRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
              C   +      + I+S S+D  + +W++  +  VQ  +   D     A HPT N++A+
Sbjct: 259  KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318



 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR----MCTLIDKFDEHDG 251
           +TG  L      S  V  + F+     I++S ++G+ ++WD      + TLID   + + 
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID---DDNP 215

Query: 252 PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP---WIL 422
           PV  + F       ++   D  +K+W+Y   +CL T  GH +     F +       WI+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL--DQTVRVW 581
           S S+D  + +WN Q++  V  L GH   V+    HP+E+++ SA+L  D+T+++W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330



 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 58/212 (27%), Positives = 90/212 (42%)
 Frame = +3

Query: 330 NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYV 509
           NY L+   FTL GH   + +  F     W+ S+S D+ I++W          ++GH   +
Sbjct: 34  NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90

Query: 510 MCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVK 689
               +    +L+VSAS D+T+++WD+S                                 
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVS----------------------------SGKCL 122

Query: 690 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 869
             L+GH   V    F+P   LIVSG+ D  V+IW +   K   + T   H + VS   F+
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFN 180

Query: 870 PRQELILSYSDDKSIRVWDMSKQTGVQTFRRD 965
               LI+S S D   R+WD +    ++T   D
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212



 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 53/186 (28%), Positives = 85/186 (45%)
 Frame = +3

Query: 486  LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLF 665
            L GH   V   +F P+ + + S+S D+ +++W                            
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---------------------------- 72

Query: 666  GTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYN 845
            G  D   +  + GH  G++  A+     L+VS +DD+ +KIW ++  K   + T +GH N
Sbjct: 73   GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSN 130

Query: 846  NVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAARH 1025
             V C  F+P+  LI+S S D+S+R+WD+     ++T     D   V A H  FN      
Sbjct: 131  YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVH--FN-----R 181

Query: 1026 DGGMIV 1043
            DG +IV
Sbjct: 182  DGSLIV 187



 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
 Frame = +3

Query: 87  TGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 266
           +G  L   +  S  V   +F+P+   I++   +  +++WD +    +     H  PV  +
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177

Query: 267 DFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTF--FHHEYPWILSASDDQ 440
            F++   L VS   D   ++W+    +CL TL+   D    +F  F     +IL+A+ D 
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDN 236

Query: 441 TIRVWNWQSRTCVCVLTGHNH--YVMCAQFH-PSEDLVVSASLDQTVRVWDISGLRKKNL 611
           T+++W++    C+   TGH +  Y + A F       +VS S D  V +W++        
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ------- 289

Query: 612 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGA--DDRQVK 785
                              T + V K  L+GH   V   A HPT  +I S A  +D+ +K
Sbjct: 290 -------------------TKEIVQK--LQGHTDVVISTACHPTENIIASAALENDKTIK 328

Query: 786 IWR 794
           +W+
Sbjct: 329 LWK 331



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 30/112 (26%), Positives = 57/112 (50%)
 Frame = +3

Query: 684  VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV 863
            +K  L GH + V+   F P    + S + D+ +KIW   + K  +  T  GH   +S   
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVA 94

Query: 864  FHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            +     L++S SDDK++++WD+S    ++T +   ++ +    +P  NL+ +
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146


>ref|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus].
          Length = 478

 Score =  103 bits (258), Expect = 2e-22
 Identities = 71/286 (24%), Positives = 120/286 (41%)
 Frame = +3

Query: 72  SSEPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDG 251
           +S PE   +   F+   A +  + F P    + T   +  + LW  R      ++  H  
Sbjct: 2   ASSPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKD 61

Query: 252 PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSAS 431
            +  + F     L  S   D  I++W    R        H   +R+  F  +  ++ SAS
Sbjct: 62  VITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASAS 121

Query: 432 DDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 611
           +D++I+VWN   +  +  L  H H+V CA+F P   L+VS S D+T+++WD +  +  N 
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181

Query: 612 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIW 791
                 SD  G                         N+ AF+P    I S   D  VKIW
Sbjct: 182 F-----SDFVGF-----------------------ANFVAFNPNGTCIASAGSDHTVKIW 213

Query: 792 RMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDM 929
            +  +K   +   + H   V+C  FHP    +++ S D ++++ D+
Sbjct: 214 DIRVNKL--LQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL 257



 Score =  102 bits (254), Expect = 6e-22
 Identities = 66/265 (24%), Positives = 115/265 (43%)
 Frame = +3

Query: 129 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
           +  + F P    + ++  +  I+LW         +F  H  PVR +DF        S  +
Sbjct: 63  ITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASE 122

Query: 309 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
           D  IKVWN   +R L++L  H  ++R   F  +   I+S S+D+TI++W+  ++ CV   
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182

Query: 489 TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
           +    +     F+P+   + SA  D TV++WDI                           
Sbjct: 183 SDFVGFANFVAFNPNGTCIASAGSDHTVKIWDI--------------------------- 215

Query: 669 TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             + +++H  + H  GVN  +FHP+   +++ + D  +KI  + E +   + T +GH   
Sbjct: 216 RVNKLLQH-YQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRL--IYTLQGHTGP 272

Query: 849 VSCAVFHPRQELILSYSDDKSIRVW 923
           V    F    EL  S   D  + +W
Sbjct: 273 VFTVSFSKGGELFTSGGADAQVLLW 297



 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 1/273 (0%)
 Frame = +3

Query: 234  FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP 413
            F  H   +  +DF        +G  D  + +W+ + +   F  +GH D I +  F     
Sbjct: 14   FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGN 73

Query: 414  WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 593
             + SAS D+TIR+W    R        H   V    F      + SAS D++++VW++  
Sbjct: 74   LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM-- 131

Query: 594  LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 773
             R++ L                          + L  H   V  A F P   LIVS ++D
Sbjct: 132  YRQRFL--------------------------YSLYRHTHWVRCAKFSPDGRLIVSCSED 165

Query: 774  RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQT 953
            + +KIW     +   V+         +   F+P    I S   D ++++WD+     +Q 
Sbjct: 166  KTIKIWDTTNKQC--VNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 223

Query: 954  FRRDHDHFWVLAAHPTFN-LLAARHDGGMIVFN 1049
            ++        ++ HP+ N L+ A  DG + + +
Sbjct: 224  YQVHSGGVNCVSFHPSGNYLITASSDGTLKILD 256



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 25/78 (32%), Positives = 41/78 (52%)
 Frame = +3

Query: 96  MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
           +L  ++  S  V  +SFHP   +++T+  +G +++ D     LI     H GPV  + F 
Sbjct: 220 LLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279

Query: 276 KQQPLFVSGGDDYKIKVW 329
           K   LF SGG D ++ +W
Sbjct: 280 KGGELFTSGGADAQVLLW 297


>ref|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partial [Bos taurus].
          Length = 371

 Score =  103 bits (258), Expect = 2e-22
 Identities = 71/286 (24%), Positives = 120/286 (41%)
 Frame = +3

Query: 72  SSEPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDG 251
           +S PE   +   F+   A +  + F P    + T   +  + LW  R      ++  H  
Sbjct: 2   ASSPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKD 61

Query: 252 PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSAS 431
            +  + F     L  S   D  I++W    R        H   +R+  F  +  ++ SAS
Sbjct: 62  VITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASAS 121

Query: 432 DDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 611
           +D++I+VWN   +  +  L  H H+V CA+F P   L+VS S D+T+++WD +  +  N 
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181

Query: 612 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIW 791
                 SD  G                         N+ AF+P    I S   D  VKIW
Sbjct: 182 F-----SDFVGF-----------------------ANFVAFNPNGTCIASAGSDHTVKIW 213

Query: 792 RMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDM 929
            +  +K   +   + H   V+C  FHP    +++ S D ++++ D+
Sbjct: 214 DIRVNKL--LQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL 257



 Score =  102 bits (254), Expect = 6e-22
 Identities = 66/265 (24%), Positives = 115/265 (43%)
 Frame = +3

Query: 129 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
           +  + F P    + ++  +  I+LW         +F  H  PVR +DF        S  +
Sbjct: 63  ITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASE 122

Query: 309 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
           D  IKVWN   +R L++L  H  ++R   F  +   I+S S+D+TI++W+  ++ CV   
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182

Query: 489 TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
           +    +     F+P+   + SA  D TV++WDI                           
Sbjct: 183 SDFVGFANFVAFNPNGTCIASAGSDHTVKIWDI--------------------------- 215

Query: 669 TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             + +++H  + H  GVN  +FHP+   +++ + D  +KI  + E +   + T +GH   
Sbjct: 216 RVNKLLQH-YQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRL--IYTLQGHTGP 272

Query: 849 VSCAVFHPRQELILSYSDDKSIRVW 923
           V    F    EL  S   D  + +W
Sbjct: 273 VFTVSFSKGGELFTSGGADAQVLLW 297



 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 1/273 (0%)
 Frame = +3

Query: 234  FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP 413
            F  H   +  +DF        +G  D  + +W+ + +   F  +GH D I +  F     
Sbjct: 14   FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGN 73

Query: 414  WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 593
             + SAS D+TIR+W    R        H   V    F      + SAS D++++VW++  
Sbjct: 74   LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM-- 131

Query: 594  LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 773
             R++ L                          + L  H   V  A F P   LIVS ++D
Sbjct: 132  YRQRFL--------------------------YSLYRHTHWVRCAKFSPDGRLIVSCSED 165

Query: 774  RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQT 953
            + +KIW     +   V+         +   F+P    I S   D ++++WD+     +Q 
Sbjct: 166  KTIKIWDTTNKQC--VNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 223

Query: 954  FRRDHDHFWVLAAHPTFN-LLAARHDGGMIVFN 1049
            ++        ++ HP+ N L+ A  DG + + +
Sbjct: 224  YQVHSGGVNCVSFHPSGNYLITASSDGTLKILD 256



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 25/78 (32%), Positives = 41/78 (52%)
 Frame = +3

Query: 96  MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
           +L  ++  S  V  +SFHP   +++T+  +G +++ D     LI     H GPV  + F 
Sbjct: 220 LLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279

Query: 276 KQQPLFVSGGDDYKIKVW 329
           K   LF SGG D ++ +W
Sbjct: 280 KGGELFTSGGADAQVLLW 297


>ref|NP_001157418.1| WD repeat-containing protein 38 [Bos taurus].
          Length = 296

 Score =  103 bits (257), Expect = 3e-22
 Identities = 70/289 (24%), Positives = 117/289 (40%)
 Frame = +3

Query: 93  GMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDF 272
           G +  F      V   +F P    +LT+  +G +  W+ +   L+ +   H GPVR   F
Sbjct: 12  GRVKFFGRHRGEVNSSAFSPDGQRLLTASEDGCVYGWETQSGRLLWRLRGHKGPVRFCRF 71

Query: 273 HKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 452
                LF S   D  I++W+    +CL  L GH   + T  F H+   + S   D+ + +
Sbjct: 72  SPDGRLFASTSCDRTIRLWDATDAKCLQVLKGHQRSVETVSFSHDSKQLASGGWDKRVML 131

Query: 453 WNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVES 632
           W  QS   +    GH   V  + F PS D + + S D T+R+WD+               
Sbjct: 132 WEVQSGQVLRHFVGHRDSVQSSDFAPSSDCLATGSWDSTIRMWDLRA------------- 178

Query: 633 DVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKA 812
                        T  +    LEGH   ++   + P+  L+ SG+ D+ + IW+ +    
Sbjct: 179 ------------GTPGIFHQELEGHRGNISCLCYSPS-GLLASGSWDKTIHIWKPSTRSL 225

Query: 813 WEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFR 959
             +   +GH   V    F P  + + S      ++VWD +     +T +
Sbjct: 226 --LIQLKGHITWVKSIAFSPDGQQLASAGYSHMVKVWDCNTGKCTETLK 272



 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 3/279 (1%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV 257
           E ++G +L +       V+   F P      ++  +  I+LWD      +     H   V
Sbjct: 49  ETQSGRLLWRLRGHKGPVRFCRFSPDGRLFASTSCDRTIRLWDATDAKCLQVLKGHQRSV 108

Query: 258 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDD 437
             + F        SGG D ++ +W  +  + L   +GH D ++++ F      + + S D
Sbjct: 109 ETVSFSHDSKQLASGGWDKRVMLWEVQSGQVLRHFVGHRDSVQSSDFAPSSDCLATGSWD 168

Query: 438 QTIRVWNWQSRTCVCV---LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 608
            TIR+W+ ++ T       L GH   + C  + PS  L+ S S D+T+ +W  S      
Sbjct: 169 STIRMWDLRAGTPGIFHQELEGHRGNISCLCYSPS-GLLASGSWDKTIHIWKPS------ 221

Query: 609 LSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKI 788
                               T   +++  L+GH   V   AF P    + S      VK+
Sbjct: 222 --------------------TRSLLIQ--LKGHITWVKSIAFSPDGQQLASAGYSHMVKV 259

Query: 789 WRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDD 905
           W  N  K  E  T +G  N      F P  +L++S + D
Sbjct: 260 WDCNTGKCTE--TLKGVLNVAHACAFMPDGKLLVSGAVD 296


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,973,614
Number of extensions: 1148790
Number of successful extensions: 5262
Number of sequences better than 1.0e-05: 125
Number of HSP's gapped: 4002
Number of HSP's successfully gapped: 358
Length of query: 352
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 249
Effective length of database: 14,273,310
Effective search space: 3554054190
Effective search space used: 3554054190
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-009777
         (1058 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_536131.2| PREDICTED: similar to Coatomer alpha subunit (A...   635   0.0  
Alignment   gi|XP_534283.2| PREDICTED: similar to coatomer protein complex,...   189   3e-48
Alignment   gi|XP_537775.2| PREDICTED: similar to platelet-activating facto...   115   9e-26
Alignment   gi|XP_854482.1| PREDICTED: similar to platelet-activating facto...   115   9e-26
Alignment   gi|XP_868508.1| PREDICTED: similar to platelet-activating facto...   115   9e-26
Alignment   gi|XP_868519.1| PREDICTED: similar to platelet-activating facto...   113   3e-25
Alignment   gi|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isof...   108   7e-24
Alignment   gi|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiar...   107   2e-23
Alignment   gi|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis...   106   3e-23
Alignment   gi|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Can...   102   8e-22

>ref|XP_536131.2| PREDICTED: similar to Coatomer alpha subunit (Alpha-coat protein)
            (Alpha-COP) (HEPCOP) (HEP-COP) [Canis familiaris].
          Length = 1241

 Score =  635 bits (1637), Expect = 0.0
 Identities = 298/311 (95%), Positives = 301/311 (96%)
 Frame = +3

Query: 114  TKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLF 293
            TKSARVKGLSFHPKRPWIL+SLHNGVIQLW    CTLIDKFDEHDGPVRGIDFHKQQPLF
Sbjct: 24   TKSARVKGLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLF 83

Query: 294  VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRT 473
            VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRT
Sbjct: 84   VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRT 143

Query: 474  CVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITG 653
            CVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITG
Sbjct: 144  CVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITG 203

Query: 654  VDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCR 833
            VDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCR
Sbjct: 204  VDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCR 263

Query: 834  GHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLL 1013
            GHYNNVSCAVFHPRQELILS S+DKSIRVWDMSK+TGVQTFRRDHD FWVLAAHP  NL 
Sbjct: 264  GHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLF 323

Query: 1014 AARHDGGMIVF 1046
            AA HDGGMIVF
Sbjct: 324  AAGHDGGMIVF 334


>ref|XP_534283.2| PREDICTED: similar to coatomer protein complex, subunit beta 2 (beta
            prime) [Canis familiaris].
          Length = 906

 Score =  189 bits (481), Expect = 3e-48
 Identities = 109/317 (34%), Positives = 161/317 (50%), Gaps = 4/317 (1%)
 Frame = +3

Query: 105  KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 10   KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69

Query: 285  PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 70   NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129

Query: 465  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 638
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 130  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177

Query: 639  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 812
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 178  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 221

Query: 813  WEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAA 992
              V T  GH  NVSCA FHP   +I++ S+D ++R+W  S      T     +  W +A+
Sbjct: 222  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 279

Query: 993  HPTFNLLAARHDGGMIV 1043
                N +A  +D G I+
Sbjct: 280  LRGSNNVALGYDEGSII 296


>ref|XP_537775.2| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 1 [Canis familiaris].
          Length = 372

 Score =  115 bits (287), Expect = 9e-26
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
 Frame = +3

Query: 243 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
           H  PV  + FH    + VS  +D  IKVW+Y+      TL GH D ++   F H    + 
Sbjct: 69  HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 128

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI----- 587
           S S D TI++W++Q   C+  + GH+H V      P+ D +VSAS D+T+++W++     
Sbjct: 129 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 188

Query: 588 ----SGLRK-----KNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 740
               +G R+     +    G + +       V ++       K  L  H+  V   ++ P
Sbjct: 189 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 248

Query: 741 TM--------------------PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                                 P ++SG+ D+ +K+W ++      + T  GH N V   
Sbjct: 249 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 306

Query: 861 VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHF 977
           +FH   + ILS +DDK++RVWD   +  ++T    H+HF
Sbjct: 307 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 344



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = +3

Query: 276 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
           K  P  +SG  D  IK+W+     CL TL+GH +++R   FH    +ILS +DD+T+RVW
Sbjct: 268 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 327

Query: 456 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 584
           +++++ C+  L  H H+V    FH +   VV+ S+DQTV+VW+
Sbjct: 328 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 370



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
 Frame = +3

Query: 354 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 533
           + L GH   +    FH  +  ++SAS+D TI+VW++++      L GH   V    F  S
Sbjct: 64  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 123

Query: 534 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 713
             L+ S S D T+++WD  G                                  + GHD 
Sbjct: 124 GKLLASCSADMTIKLWDFQGFE----------------------------CIRTMHGHDH 155

Query: 714 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE--LI 887
            V+  A  P    IVS + D+ +K+W +     + V T  GH   V   +  P Q+  LI
Sbjct: 156 NVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWV--RMVRPNQDGTLI 211

Query: 888 LSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
            S S+D+++RVW ++ +   +   R+H+H
Sbjct: 212 ASCSNDQTVRVWVVATKE-CKAELREHEH 239



 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = +3

Query: 159 PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
           P++L+   +  I++WD      +     HD  VRG+ FH      +S  DD  ++VW+YK
Sbjct: 271 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 330

Query: 339 LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            +RC+ TL  H  ++ +  FH   P++++ S DQT++VW
Sbjct: 331 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 369



 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%)
 Frame = +3

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
           K+ L GH   V    FHP   ++VS ++D  +K+W   E+  +E  T +GH ++V    F
Sbjct: 63  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 120

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
               +L+ S S D +I++WD      ++T    HDH
Sbjct: 121 DHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDH 155


>ref|XP_854482.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 2 [Canis familiaris].
          Length = 410

 Score =  115 bits (287), Expect = 9e-26
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
 Frame = +3

Query: 243 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
           H  PV  + FH    + VS  +D  IKVW+Y+      TL GH D ++   F H    + 
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI----- 587
           S S D TI++W++Q   C+  + GH+H V      P+ D +VSAS D+T+++W++     
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226

Query: 588 ----SGLRK-----KNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 740
               +G R+     +    G + +       V ++       K  L  H+  V   ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286

Query: 741 TM--------------------PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                                 P ++SG+ D+ +K+W ++      + T  GH N V   
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344

Query: 861 VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHF 977
           +FH   + ILS +DDK++RVWD   +  ++T    H+HF
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = +3

Query: 276 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
           K  P  +SG  D  IK+W+     CL TL+GH +++R   FH    +ILS +DD+T+RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 456 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 584
           +++++ C+  L  H H+V    FH +   VV+ S+DQTV+VW+
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
 Frame = +3

Query: 354 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 533
           + L GH   +    FH  +  ++SAS+D TI+VW++++      L GH   V    F  S
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161

Query: 534 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 713
             L+ S S D T+++WD  G                                  + GHD 
Sbjct: 162 GKLLASCSADMTIKLWDFQGFE----------------------------CIRTMHGHDH 193

Query: 714 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE--LI 887
            V+  A  P    IVS + D+ +K+W +     + V T  GH   V   +  P Q+  LI
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWV--RMVRPNQDGTLI 249

Query: 888 LSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
            S S+D+++RVW ++ +   +   R+H+H
Sbjct: 250 ASCSNDQTVRVWVVATKE-CKAELREHEH 277



 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = +3

Query: 159 PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
           P++L+   +  I++WD      +     HD  VRG+ FH      +S  DD  ++VW+YK
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368

Query: 339 LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            +RC+ TL  H  ++ +  FH   P++++ S DQT++VW
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%)
 Frame = +3

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
           K+ L GH   V    FHP   ++VS ++D  +K+W   E+  +E  T +GH ++V    F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
               +L+ S S D +I++WD      ++T    HDH
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDH 193


>ref|XP_868508.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 3 [Canis familiaris].
          Length = 345

 Score =  115 bits (287), Expect = 9e-26
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
 Frame = +3

Query: 243 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
           H  PV  + FH    + VS  +D  IKVW+Y+      TL GH D ++   F H    + 
Sbjct: 42  HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 101

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI----- 587
           S S D TI++W++Q   C+  + GH+H V      P+ D +VSAS D+T+++W++     
Sbjct: 102 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 161

Query: 588 ----SGLRK-----KNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 740
               +G R+     +    G + +       V ++       K  L  H+  V   ++ P
Sbjct: 162 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 221

Query: 741 TM--------------------PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                                 P ++SG+ D+ +K+W ++      + T  GH N V   
Sbjct: 222 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 279

Query: 861 VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHF 977
           +FH   + ILS +DDK++RVWD   +  ++T    H+HF
Sbjct: 280 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 317



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = +3

Query: 276 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
           K  P  +SG  D  IK+W+     CL TL+GH +++R   FH    +ILS +DD+T+RVW
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300

Query: 456 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 584
           +++++ C+  L  H H+V    FH +   VV+ S+DQTV+VW+
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
 Frame = +3

Query: 354 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 533
           + L GH   +    FH  +  ++SAS+D TI+VW++++      L GH   V    F  S
Sbjct: 37  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 96

Query: 534 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 713
             L+ S S D T+++WD  G                                  + GHD 
Sbjct: 97  GKLLASCSADMTIKLWDFQGFE----------------------------CIRTMHGHDH 128

Query: 714 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE--LI 887
            V+  A  P    IVS + D+ +K+W +     + V T  GH   V   +  P Q+  LI
Sbjct: 129 NVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWV--RMVRPNQDGTLI 184

Query: 888 LSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
            S S+D+++RVW ++ +   +   R+H+H
Sbjct: 185 ASCSNDQTVRVWVVATKE-CKAELREHEH 212



 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = +3

Query: 159 PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
           P++L+   +  I++WD      +     HD  VRG+ FH      +S  DD  ++VW+YK
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 303

Query: 339 LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            +RC+ TL  H  ++ +  FH   P++++ S DQT++VW
Sbjct: 304 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342



 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%)
 Frame = +3

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
           K+ L GH   V    FHP   ++VS ++D  +K+W   E+  +E  T +GH ++V    F
Sbjct: 36  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 93

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
               +L+ S S D +I++WD      ++T    HDH
Sbjct: 94  DHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDH 128


>ref|XP_868519.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 5 [Canis familiaris].
          Length = 415

 Score =  113 bits (282), Expect = 3e-25
 Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 39/284 (13%)
 Frame = +3

Query: 243 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
           H  PV  + FH    + VS  +D  IKVW+Y+      TL GH D ++   F H    + 
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI----- 587
           S S D TI++W++Q   C+  + GH+H V      P+ D +VSAS D+T+++W++     
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226

Query: 588 ----SGLRK-----KNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 740
               +G R+     +    G + +       V ++       K  L  H+  V   ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286

Query: 741 TM-------------------------PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYN 845
                                      P ++SG+ D+ +K+W ++      + T  GH N
Sbjct: 287 ESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDN 344

Query: 846 NVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHF 977
            V   +FH   + ILS +DDK++RVWD   +  ++T    H+HF
Sbjct: 345 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 387



 Score =  102 bits (254), Expect = 6e-22
 Identities = 68/281 (24%), Positives = 120/281 (42%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRG 263
           ETG      +  +  V+ +SF      + +   +  I+LWD++    I     HD  V  
Sbjct: 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS 197

Query: 264 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT 443
           +         VS   D  IK+W  +   C+ T  GH +++R    + +   I S S+DQT
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257

Query: 444 IRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGA 623
           +RVW   ++ C   L  H H V C  + P       +S+ +     + +   KK+  PG 
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSY---SSISEATGSEEENPRTKKSGKPGP 314

Query: 624 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 803
                     + ++  +  +    L GHD  V    FH     I+S ADD+ +++W    
Sbjct: 315 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 374

Query: 804 SKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWD 926
            +   + T   H + V+   FH     +++ S D++++VW+
Sbjct: 375 KRC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 413



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
 Frame = +3

Query: 354 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 533
           + L GH   +    FH  +  ++SAS+D TI+VW++++      L GH   V    F  S
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161

Query: 534 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 713
             L+ S S D T+++WD  G                                  + GHD 
Sbjct: 162 GKLLASCSADMTIKLWDFQGFE----------------------------CIRTMHGHDH 193

Query: 714 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE--LI 887
            V+  A  P    IVS + D+ +K+W +     + V T  GH   V   +  P Q+  LI
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWV--RMVRPNQDGTLI 249

Query: 888 LSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
            S S+D+++RVW ++ +   +   R+H+H
Sbjct: 250 ASCSNDQTVRVWVVATKE-CKAELREHEH 277



 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%)
 Frame = +3

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
           K+ L GH   V    FHP   ++VS ++D  +K+W   E+  +E  T +GH ++V    F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
               +L+ S S D +I++WD      ++T    HDH
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDH 193


>ref|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isoform 1 [Canis
           familiaris].
          Length = 406

 Score =  108 bits (271), Expect = 7e-24
 Identities = 69/273 (25%), Positives = 120/273 (43%)
 Frame = +3

Query: 105 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
           +F      V  ++F P    + +   +  +++W   +      F  H   VR + F    
Sbjct: 56  RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDG 115

Query: 285 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
              V+  DD  +KVW+   ++ LF+L  H++++R   F  +   I+SASDD+T+++W+  
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175

Query: 465 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG 644
           SR CV     H  +V    FHPS   + +AS+D TV+VWD+                   
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDV------------------- 216

Query: 645 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVD 824
                    T  +++H  + H   VN  +FHP+   +++ + D  +KI  + E +   + 
Sbjct: 217 --------RTHRLLQH-YQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRL--LY 265

Query: 825 TCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
           T  GH    +   F    E   S   D+ + VW
Sbjct: 266 TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 92.4 bits (228), Expect = 6e-19
 Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 4/287 (1%)
 Frame = +3

Query: 81  PETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVR 260
           PE   +   F+     +  + F      + +   +  + +W  +  +   +F  H   V 
Sbjct: 6   PEDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVT 65

Query: 261 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 440
            ++F     L  SG  D  +++W   ++        H   +R+  F  +   +++ASDD+
Sbjct: 66  CVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDK 125

Query: 441 TIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 620
           T++VW+   +  +  L+ H ++V CA+F P   L+VSAS D+TV++WD            
Sbjct: 126 TVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD------------ 173

Query: 621 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 800
                            T     H    H   V +  FHP+   I + + D  VK+W + 
Sbjct: 174 ----------------KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217

Query: 801 ESKAWEVDTCRGHYNNVSCAV----FHPRQELILSYSDDKSIRVWDM 929
             +  +      HY   S AV    FHP    +L+ S D ++++ D+
Sbjct: 218 THRLLQ------HYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL 258



 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 16/244 (6%)
 Frame = +3

Query: 366  GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLV 545
            GH D I +  F      + S S D  + VW+ + ++      GH   V C  F PS  L+
Sbjct: 17   GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76

Query: 546  VSASLDQTVRVWDISGLRKKNLSPGAVESDVRGI----TGVDLFGTTDAVVKHVLEGH-- 707
             S S D+TVR+W I  ++ ++    A  + VR +     G  L   +D     V   H  
Sbjct: 77   ASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQ 135

Query: 708  ------DRGVNW---AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                   + +NW   A F P   LIVS +DD+ VK+W     +   V +   H   V+  
Sbjct: 136  KFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSREC--VHSYCEHGGFVTYV 193

Query: 861  VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFN-LLAARHDGGM 1037
             FHP    I + S D +++VWD+     +Q ++        L+ HP+ N LL A  D  +
Sbjct: 194  DFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTL 253

Query: 1038 IVFN 1049
             + +
Sbjct: 254  KILD 257



 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 56/240 (23%), Positives = 96/240 (40%)
 Frame = +3

Query: 81  PETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVR 260
           P   G  T F   +A V+ + F      ++T+  +  +++W       +    +H   VR
Sbjct: 90  PNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVR 149

Query: 261 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 440
              F     L VS  DD  +K+W+   R C+ +   H  ++    FH     I +AS D 
Sbjct: 150 CARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDN 209

Query: 441 TIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 620
           T++VW+ ++   +     H+  V    FHPS + +++AS D T+++ D+           
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL----------- 258

Query: 621 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 800
                             +  + + L GH       AF  T     SG  D QV +W+ N
Sbjct: 259 -----------------MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301


>ref|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris].
          Length = 415

 Score =  107 bits (267), Expect = 2e-23
 Identities = 69/280 (24%), Positives = 127/280 (45%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRG 263
           ETG     F   +A +  LSF+P+   + T   +   +LWD +    +     H   +  
Sbjct: 165 ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIIS 224

Query: 264 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT 443
           + F+      V+G  D+ + VW     R ++TL+GH   I +  F+ +   IL+ S D+T
Sbjct: 225 LSFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDKT 284

Query: 444 IRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGA 623
             +W+  +  CV  LTGH+  ++ + F  +  L+ +AS D T RV+  S   +K L+   
Sbjct: 285 CMLWDASNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVF--SAATRKCLTK-- 340

Query: 624 VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 803
                                   LEGH+  ++  +F+P    +++G+ D   +IW    
Sbjct: 341 ------------------------LEGHEGEISKISFNPQGNRLLTGSADETARIWDAQT 376

Query: 804 SKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
            +  +V    GH + +    F+ + ++I++ S D + R+W
Sbjct: 377 GQCLQV--LEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414



 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 2/271 (0%)
 Frame = +3

Query: 243  HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEY-PWI 419
            H  P+  +  +K    F++G  D   K+W+      L TL GH + +    F++ Y   I
Sbjct: 91   HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150

Query: 420  LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR 599
             + S D+T ++W+ ++  C     GH   ++C  F+P   LV + S+D T ++WDI    
Sbjct: 151  ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ--- 207

Query: 600  KKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQ 779
                            +G ++F          L GH   +   +F+ +   IV+G+ D  
Sbjct: 208  ----------------SGEEVF---------TLRGHSAEIISLSFNTSGDRIVTGSFDHT 242

Query: 780  VKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFR 959
            V +W  +  +  +V T  GH   +S A+F+    LIL+ S DK+  +WD S    V T  
Sbjct: 243  VAVWEADTGR--KVYTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDASNGKCVATLT 300

Query: 960  RDHDHFWVLAAHPTFNLLA-ARHDGGMIVFN 1049
               D         T  L+A A  DG   VF+
Sbjct: 301  GHDDEILDSCFDYTGKLIATASADGTARVFS 331



 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 67/274 (24%), Positives = 113/274 (41%), Gaps = 15/274 (5%)
 Frame = +3

Query: 168 LTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ-PLFVSGGDDYKIKVWNYKLR 344
           +T  ++   +LWD      +   + H   V  I F+        +G  D   K+W+ +  
Sbjct: 108 ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167

Query: 345 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQF 524
           +C  T  GH   I    F+ +   + + S D T ++W+ QS   V  L GH+  ++   F
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSF 227

Query: 525 HPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVD--------------L 662
           + S D +V+ S D TV VW+    RK     G        +   D              L
Sbjct: 228 NTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDKTCML 287

Query: 663 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 842
           +  ++      L GHD  +  + F  T  LI + + D   +++     K   +    GH 
Sbjct: 288 WDASNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVFSAATRKC--LTKLEGHE 345

Query: 843 NNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTG 944
             +S   F+P+   +L+ S D++ R+WD   QTG
Sbjct: 346 GEISKISFNPQGNRLLTGSADETARIWD--AQTG 377



 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 44/168 (26%), Positives = 72/168 (42%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV 257
           E +TG  +       A +    F+     ILT   +    LWD      +     HD  +
Sbjct: 247 EADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDASNGKCVATLTGHDDEI 306

Query: 258 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDD 437
               F     L  +   D   +V++   R+CL  L GH   I    F+ +   +L+ S D
Sbjct: 307 LDSCFDYTGKLIATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQGNRLLTGSAD 366

Query: 438 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 581
           +T R+W+ Q+  C+ VL GH   +    F+   D++++ S D T R+W
Sbjct: 367 ETARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414


>ref|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis familiaris].
          Length = 334

 Score =  106 bits (265), Expect = 3e-23
 Identities = 74/278 (26%), Positives = 126/278 (45%), Gaps = 19/278 (6%)
 Frame = +3

Query: 243  HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
            H   V  + F        S   D  IK+W     +   T+ GH   I    +  +   ++
Sbjct: 44   HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103

Query: 423  SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI-SGLR 599
            SASDD+T+++W+  S  C+  L GH++YV C  F+P  +L+VS S D++VR+WD+ +G  
Sbjct: 104  SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163

Query: 600  KKNLSPGA---------------VESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAF 734
             K L   +               V S   G+ G          +K +L+  +  V++  F
Sbjct: 164  LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCG-KTGNAASRCMKLILDDDNPPVSFVKF 222

Query: 735  HPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH---PRQELILSYSDD 905
             P    I++   D  +K+W  ++ K   + T  GH N   C   +      + I+S S+D
Sbjct: 223  SPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280

Query: 906  KSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
              + +W++  +  VQ  +   D     A HPT N++A+
Sbjct: 281  NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318



 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 3/256 (1%)
 Frame = +3

Query: 165 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLR 344
           ++++  +  +++WD      +     H   V   +F+ Q  L VSG  D  +++W+ K  
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161

Query: 345 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTI-RVWNWQSRTCVCVLTGHNHYVMCAQ 521
           +CL TL  H D +    F+ +   I+S+S D    +  N  SR    +L   N  V   +
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDNPPVSFVK 221

Query: 522 FHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLE 701
           F P+   +++A+LD T+++WD S  + K L       + +     +   T          
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYS--KGKCLKTYTGHKNEKYCIFANFSVT---------- 269

Query: 702 GHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE 881
               G  W         IVSG++D  V IW +   +   V   +GH + V     HP + 
Sbjct: 270 ----GGKW---------IVSGSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTEN 314

Query: 882 LILS--YSDDKSIRVW 923
           +I S    +DK+I++W
Sbjct: 315 IIASAALENDKTIKLW 330



 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDY---RMCTLIDKFDEHDGP 254
           +TG  L      S  V  + F+     I++S ++G+         R   LI   D+ + P
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMKLI--LDDDNPP 216

Query: 255 VRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP---WILS 425
           V  + F       ++   D  +K+W+Y   +CL T  GH +     F +       WI+S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276

Query: 426 ASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL--DQTVRVW 581
            S+D  + +WN Q++  V  L GH   V+    HP+E+++ SA+L  D+T+++W
Sbjct: 277 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 53/192 (27%), Positives = 81/192 (42%)
 Frame = +3

Query: 330 NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYV 509
           NY L+   FTL GH   + +  F     W+ S+S D+ I++W          ++GH   +
Sbjct: 34  NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90

Query: 510 MCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVK 689
               +    +L+VSAS D+T+++WD+S                                 
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVS----------------------------SGKCL 122

Query: 690 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 869
             L+GH   V    F+P   LIVSG+ D  V+IW +   K   + T   H + VS   F+
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFN 180

Query: 870 PRQELILSYSDD 905
               LI+S S D
Sbjct: 181 RDGSLIVSSSYD 192



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 30/112 (26%), Positives = 57/112 (50%)
 Frame = +3

Query: 684  VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV 863
            +K  L GH + V+   F P    + S + D+ +KIW   + K  +  T  GH   +S   
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVA 94

Query: 864  FHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            +     L++S SDDK++++WD+S    ++T +   ++ +    +P  NL+ +
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146


>ref|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Canis familiaris].
          Length = 833

 Score =  102 bits (253), Expect = 8e-22
 Identities = 66/265 (24%), Positives = 115/265 (43%)
 Frame = +3

Query: 129  VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
            V  + F P    + ++  +  ++LW         +F  H  PVR +DF        +  +
Sbjct: 418  VTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASE 477

Query: 309  DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
            D  IKVWN   +R L++L  H  ++R   F  +   I+S S+D+TI++W+  ++ CV   
Sbjct: 478  DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 537

Query: 489  TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
            +    +     F+P+   + SA  D TV++WDI                           
Sbjct: 538  SDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIR-------------------------- 571

Query: 669  TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
              + +++H  + H  GVN  +FHP+   I++ + D  +KI  + E +   + T +GH   
Sbjct: 572  -VNKLLQHY-QVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRL--IYTLQGHTGP 627

Query: 849  VSCAVFHPRQELILSYSDDKSIRVW 923
            V    F    EL  S   D  + +W
Sbjct: 628  VFTVSFSKGGELFSSGGADTQVLLW 652



 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 66/274 (24%), Positives = 116/274 (42%)
 Frame = +3

Query: 108  FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 287
            F+   A +  + F P    + T+  +  + LW+ +      ++  H   V  + F     
Sbjct: 369  FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGN 428

Query: 288  LFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQS 467
            L  S   D  +++W    R        H   +R+  F  +  ++ +AS+D++I+VWN   
Sbjct: 429  LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYR 488

Query: 468  RTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGI 647
            +  +  L  H H+V CA+F P   L+VS S D+T+++WD +  +  N       SD  G 
Sbjct: 489  QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF-----SDSVGF 543

Query: 648  TGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDT 827
                                    N+  F+P    I S   D  VKIW +  +K   +  
Sbjct: 544  -----------------------ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKL--LQH 578

Query: 828  CRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDM 929
             + H   V+C  FHP    I++ S D ++++ D+
Sbjct: 579  YQVHSGGVNCVSFHPSGNYIITASSDGTLKILDL 612



 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 54/240 (22%), Positives = 99/240 (41%)
 Frame = +3

Query: 81   PETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVR 260
            P+  G  ++F+  +A V+ + F     ++ T+  +  I++W+      +     H   VR
Sbjct: 444  PDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVR 503

Query: 261  GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 440
               F     L VS  +D  IK+W+   ++C+      + +     F+     I SA  D 
Sbjct: 504  CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDH 563

Query: 441  TIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 620
            T+++W+ +    +     H+  V C  FHPS + +++AS D T+++ D+           
Sbjct: 564  TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDL----------- 612

Query: 621  AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 800
                              +  + + L+GH   V   +F     L  SG  D QV +WR N
Sbjct: 613  -----------------LEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTN 655



 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 1/273 (0%)
 Frame = +3

Query: 234  FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP 413
            F  H   +  +DF        +   D  + +WN K +   F  +GH D + +  F     
Sbjct: 369  FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGN 428

Query: 414  WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 593
             + SAS D+T+R+W    R        H   V    F      + +AS D++++VW++  
Sbjct: 429  LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM-- 486

Query: 594  LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 773
             R++ L                          + L  H   V  A F P   LIVS ++D
Sbjct: 487  YRQRFL--------------------------YSLYRHTHWVRCAKFSPDGRLIVSCSED 520

Query: 774  RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQT 953
            + +KIW     +   V+         +   F+P    I S   D ++++WD+     +Q 
Sbjct: 521  KTIKIWDTTNKQC--VNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 578

Query: 954  FRRDHDHFWVLAAHPTFN-LLAARHDGGMIVFN 1049
            ++        ++ HP+ N ++ A  DG + + +
Sbjct: 579  YQVHSGGVNCVSFHPSGNYIITASSDGTLKILD 611



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
 Frame = +3

Query: 96  MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
           +L  ++  S  V  +SFHP   +I+T+  +G +++ D     LI     H GPV  + F 
Sbjct: 575 LLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 634

Query: 276 KQQPLFVSGGDDYKIKVW--NYKLRRC 350
           K   LF SGG D ++ +W  N+    C
Sbjct: 635 KGGELFSSGGADTQVLLWRTNFDYLNC 661


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 43,800,853
Number of extensions: 1180675
Number of successful extensions: 6249
Number of sequences better than 1.0e-05: 171
Number of HSP's gapped: 4590
Number of HSP's successfully gapped: 442
Length of query: 352
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 248
Effective length of database: 15,407,560
Effective search space: 3821074880
Effective search space used: 3821074880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-009777
         (1058 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001928732.1| PREDICTED: coatomer subunit alpha isoform 1 ...   659   0.0  
Alignment   gi|XP_001928742.1| PREDICTED: coatomer subunit alpha isoform 2 ...   659   0.0  
Alignment   gi|XP_001926139.3| PREDICTED: coatomer subunit beta' [Sus scrof...   189   2e-48
Alignment   gi|NP_999415.1| platelet-activating factor acetylhydrolase IB s...   114   1e-25
Alignment   gi|XP_003132294.2| PREDICTED: POC1 centriolar protein homolog A...   111   6e-25
Alignment   gi|XP_003353752.1| PREDICTED: WD repeat-containing protein 5 [S...   106   2e-23
Alignment   gi|XP_003353713.1| PREDICTED: WD repeat-containing protein 38-l...   101   6e-22
Alignment   gi|XP_001927805.1| PREDICTED: WD repeat-containing protein 38-l...   101   6e-22
Alignment   gi|XP_003358840.1| PREDICTED: WD repeat-containing protein 5B-l...   100   1e-21
Alignment   gi|XP_003362067.1| PREDICTED: f-box/WD repeat-containing protei...    96   3e-20

>ref|XP_001928732.1| PREDICTED: coatomer subunit alpha isoform 1 [Sus scrofa].
          Length = 1233

 Score =  659 bits (1700), Expect = 0.0
 Identities = 309/317 (97%), Positives = 311/317 (98%)
 Frame = +3

Query: 96   MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
            MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
Sbjct: 1    MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60

Query: 276  KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
Sbjct: 61   KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120

Query: 456  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 635
            NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
Sbjct: 121  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180

Query: 636  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 815
            VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
Sbjct: 181  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240

Query: 816  EVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAH 995
            EVDTCRGHYNNVSCAVFHPRQELILS S+DKSIRVWDMSK+TGVQTFRRDHD FWVLAAH
Sbjct: 241  EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300

Query: 996  PTFNLLAARHDGGMIVF 1046
            P  NL AA HDGGMIVF
Sbjct: 301  PNLNLFAAGHDGGMIVF 317


>ref|XP_001928742.1| PREDICTED: coatomer subunit alpha isoform 2 [Sus scrofa].
          Length = 1224

 Score =  659 bits (1700), Expect = 0.0
 Identities = 309/317 (97%), Positives = 311/317 (98%)
 Frame = +3

Query: 96   MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
            MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
Sbjct: 1    MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60

Query: 276  KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
Sbjct: 61   KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120

Query: 456  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 635
            NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
Sbjct: 121  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180

Query: 636  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 815
            VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
Sbjct: 181  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240

Query: 816  EVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAH 995
            EVDTCRGHYNNVSCAVFHPRQELILS S+DKSIRVWDMSK+TGVQTFRRDHD FWVLAAH
Sbjct: 241  EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300

Query: 996  PTFNLLAARHDGGMIVF 1046
            P  NL AA HDGGMIVF
Sbjct: 301  PNLNLFAAGHDGGMIVF 317


>ref|XP_001926139.3| PREDICTED: coatomer subunit beta' [Sus scrofa].
          Length = 906

 Score =  189 bits (481), Expect = 2e-48
 Identities = 109/317 (34%), Positives = 161/317 (50%), Gaps = 4/317 (1%)
 Frame = +3

Query: 105  KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 10   KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69

Query: 285  PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 70   NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129

Query: 465  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 638
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 130  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177

Query: 639  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 812
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 178  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 221

Query: 813  WEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAA 992
              V T  GH  NVSCA FHP   +I++ S+D ++R+W  S      T     +  W +A+
Sbjct: 222  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 279

Query: 993  HPTFNLLAARHDGGMIV 1043
                N +A  +D G I+
Sbjct: 280  LRGSNNVALGYDEGSII 296


>ref|NP_999415.1| platelet-activating factor acetylhydrolase IB subunit alpha [Sus
           scrofa].
          Length = 410

 Score =  114 bits (284), Expect = 1e-25
 Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
 Frame = +3

Query: 243 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
           H  PV  + FH    + VS  +D  IKVW+Y+      TL GH D ++   F H    + 
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI----- 587
           S S D TI++W++Q   C+  + GH+H V      P+ D +VSA+ D+T+++W++     
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYC 226

Query: 588 ----SGLRK-----KNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 740
               +G R+     +    G + +       V ++       K  L  H+  V   ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286

Query: 741 TM--------------------PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                                 P ++SG+ D+ +K+W ++      + T  GH N V   
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344

Query: 861 VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHF 977
           +FH   + ILS +DDK++RVWD   +  ++T    H+HF
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382



 Score = 97.8 bits (242), Expect = 9e-21
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = +3

Query: 276 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
           K  P  +SG  D  IK+W+     CL TL+GH +++R   FH    +ILS +DD+T+RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 456 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 584
           +++++ C+  L  H H+V    FH +   VV+ S+DQTV+VW+
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408



 Score = 82.0 bits (201), Expect = 5e-16
 Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
 Frame = +3

Query: 354 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 533
           + L GH   +    FH  +  ++SAS+D TI+VW++++      L GH   V    F  S
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161

Query: 534 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 713
             L+ S S D T+++WD  G                                  + GHD 
Sbjct: 162 GKLLASCSADMTIKLWDFQGFE----------------------------CIRTMHGHDH 193

Query: 714 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE--LI 887
            V+  A  P    IVS A D+ +K+W +     + V T  GH   V   +  P Q+  LI
Sbjct: 194 NVSSVAIMPNGDHIVSAARDKTIKMWEV--QTGYCVKTFTGHREWV--RMVRPNQDGTLI 249

Query: 888 LSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
            S S+D+++RVW ++ +   +   R+H+H
Sbjct: 250 ASCSNDQTVRVWVVATKE-CKAELREHEH 277



 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = +3

Query: 159 PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
           P++L+   +  I++WD      +     HD  VRG+ FH      +S  DD  ++VW+YK
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368

Query: 339 LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            +RC+ TL  H  ++ +  FH   P++++ S DQT++VW
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%)
 Frame = +3

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
           K+ L GH   V    FHP   ++VS ++D  +K+W   E+  +E  T +GH ++V    F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
               +L+ S S D +I++WD      ++T    HDH
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDH 193


>ref|XP_003132294.2| PREDICTED: POC1 centriolar protein homolog A-like [Sus scrofa].
          Length = 344

 Score =  111 bits (278), Expect = 6e-25
 Identities = 72/273 (26%), Positives = 120/273 (43%)
 Frame = +3

Query: 105 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
           +F      V  ++F P    + +   +  +++W   +      F  H   VR + F    
Sbjct: 56  RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDG 115

Query: 285 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
             FV+  DD  IKVW+   ++ LF+L  H++++R   F  +   I+SASDD+T+++W+  
Sbjct: 116 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175

Query: 465 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG 644
           SR CV     H  +V    FHPS   V +A +D TV+VWD+                   
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR------------------ 217

Query: 645 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVD 824
                    T  +++H  + H   VN  +FHP+   +V+ + D  +KI  + E +   + 
Sbjct: 218 ---------THRLLQHY-QLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRL--LY 265

Query: 825 TCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
           T  GH    +   F    E   S   D+ + VW
Sbjct: 266 TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 4/290 (1%)
 Frame = +3

Query: 72  SSEPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDG 251
           S  PE   +   F+     V  + F      + +   +  + +W  +  +   +F  H  
Sbjct: 3   SPYPEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKD 62

Query: 252 PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSAS 431
            V  ++F     L  SG  D  +++W   ++        H   +R+  F  +    ++AS
Sbjct: 63  AVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTAS 122

Query: 432 DDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL 611
           DD+TI+VW+   +  +  L+ H ++V CA+F P   L+VSAS D+TV++WD         
Sbjct: 123 DDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD--------- 173

Query: 612 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIW 791
                               T     H    H   V +  FHP+   + +   D  VK+W
Sbjct: 174 -------------------KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 214

Query: 792 RMNESKAWEVDTCRGHYNNVSCAV----FHPRQELILSYSDDKSIRVWDM 929
            +   +  +      HY   S AV    FHP    +++ S D ++++ D+
Sbjct: 215 DVRTHRLLQ------HYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258



 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
 Frame = +3

Query: 366  GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLV 545
            GH D +    F      + S S D  + VW+ + ++     TGH   V C  F PS  L+
Sbjct: 17   GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76

Query: 546  VSASLDQTVRVWDISGLRKKNLSPGAVESDVRGI----TGVDLFGTTDAVVKHVLEGH-- 707
             S S D+TVR+W +  ++ ++    A  + VR +     G      +D     V   H  
Sbjct: 77   ASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQ 135

Query: 708  ------DRGVNW---AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                   + +NW   A F P   LIVS +DD+ VK+W     +   V +   H   V+  
Sbjct: 136  KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC--VHSYCEHGGFVTYV 193

Query: 861  VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLL 1013
             FHP    + +   D +++VWD+     +Q ++        L+ HP+ N L
Sbjct: 194  DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYL 244



 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 24/81 (29%), Positives = 40/81 (49%)
 Frame = +3

Query: 87  TGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 266
           T  +L  ++  SA V  LSFHP   +++T+  +  +++ D     L+     H GP   +
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277

Query: 267 DFHKQQPLFVSGGDDYKIKVW 329
            F +    F SGG D ++ VW
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW 298


>ref|XP_003353752.1| PREDICTED: WD repeat-containing protein 5 [Sus scrofa].
          Length = 334

 Score =  106 bits (265), Expect = 2e-23
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 3/300 (1%)
 Frame = +3

Query: 129  VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
            V  + F P   W+ +S  + +I++W             H   +  + +     L VS  D
Sbjct: 48   VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107

Query: 309  DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
            D  +K+W+    +CL TL GH +Y+    F+ +   I+S S D+++R+W+ ++  C+  L
Sbjct: 108  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167

Query: 489  TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
              H+  V    F+    L+VS+S D   R+WD +                          
Sbjct: 168  PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-------------------------- 201

Query: 669  TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             +   +K +++  +  V++  F P    I++   D  +K+W  ++ K   + T  GH N 
Sbjct: 202  -SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNE 258

Query: 849  VSCAVFH---PRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
              C   +      + I+S S+D  + +W++  +  VQ  +   D     A HPT N++A+
Sbjct: 259  KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318



 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR----MCTLIDKFDEHDG 251
           +TG  L      S  V  + F+     I++S ++G+ ++WD      + TLID   + + 
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID---DDNP 215

Query: 252 PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP---WIL 422
           PV  + F       ++   D  +K+W+Y   +CL T  GH +     F +       WI+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL--DQTVRVW 581
           S S+D  + +WN Q++  V  L GH   V+    HP+E+++ SA+L  D+T+++W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330



 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 58/212 (27%), Positives = 90/212 (42%)
 Frame = +3

Query: 330 NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYV 509
           NY L+   FTL GH   + +  F     W+ S+S D+ I++W          ++GH   +
Sbjct: 34  NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90

Query: 510 MCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVK 689
               +    +L+VSAS D+T+++WD+S                                 
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVS----------------------------SGKCL 122

Query: 690 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 869
             L+GH   V    F+P   LIVSG+ D  V+IW +   K   + T   H + VS   F+
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFN 180

Query: 870 PRQELILSYSDDKSIRVWDMSKQTGVQTFRRD 965
               LI+S S D   R+WD +    ++T   D
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212



 Score = 78.2 bits (191), Expect = 7e-15
 Identities = 53/186 (28%), Positives = 85/186 (45%)
 Frame = +3

Query: 486  LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLF 665
            L GH   V   +F P+ + + S+S D+ +++W                            
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---------------------------- 72

Query: 666  GTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYN 845
            G  D   +  + GH  G++  A+     L+VS +DD+ +KIW ++  K   + T +GH N
Sbjct: 73   GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSN 130

Query: 846  NVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAARH 1025
             V C  F+P+  LI+S S D+S+R+WD+     ++T     D   V A H  FN      
Sbjct: 131  YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVH--FN-----R 181

Query: 1026 DGGMIV 1043
            DG +IV
Sbjct: 182  DGSLIV 187



 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
 Frame = +3

Query: 87  TGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 266
           +G  L   +  S  V   +F+P+   I++   +  +++WD +    +     H  PV  +
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177

Query: 267 DFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTF--FHHEYPWILSASDDQ 440
            F++   L VS   D   ++W+    +CL TL+   D    +F  F     +IL+A+ D 
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDN 236

Query: 441 TIRVWNWQSRTCVCVLTGHNH--YVMCAQFH-PSEDLVVSASLDQTVRVWDISGLRKKNL 611
           T+++W++    C+   TGH +  Y + A F       +VS S D  V +W++        
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ------- 289

Query: 612 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGA--DDRQVK 785
                              T + V K  L+GH   V   A HPT  +I S A  +D+ +K
Sbjct: 290 -------------------TKEIVQK--LQGHTDVVISTACHPTENIIASAALENDKTIK 328

Query: 786 IWR 794
           +W+
Sbjct: 329 LWK 331



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 30/112 (26%), Positives = 57/112 (50%)
 Frame = +3

Query: 684  VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV 863
            +K  L GH + V+   F P    + S + D+ +KIW   + K  +  T  GH   +S   
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVA 94

Query: 864  FHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            +     L++S SDDK++++WD+S    ++T +   ++ +    +P  NL+ +
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146


>ref|XP_003353713.1| PREDICTED: WD repeat-containing protein 38-like [Sus scrofa].
          Length = 312

 Score =  101 bits (252), Expect = 6e-22
 Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 2/289 (0%)
 Frame = +3

Query: 66  INSSEPET--GGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFD 239
           +NS  P T   G +  +      V   +F P    +LT+  +G +  W+ +   L+ K  
Sbjct: 1   MNSGAPGTLAVGRVKFYCRHRGEVNSSTFSPDGQRLLTASEDGCVYGWETQSGRLLWKLG 60

Query: 240 EHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWI 419
            H GPV+   F     LF S   D  I++W+     CL  L GH   + T  F  +   +
Sbjct: 61  GHTGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQL 120

Query: 420 LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR 599
            S   D+ + +W  QS   +  L GH   +  + F PS D + + S D T+R+W      
Sbjct: 121 ASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMW------ 174

Query: 600 KKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQ 779
                              DL G T A+    LEGH   ++   F     L+ SG+ D+ 
Sbjct: 175 -------------------DLRGGTGAIFHQELEGHRGNISCLCF-SAFGLLASGSWDKT 214

Query: 780 VKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWD 926
           + IW+ +      +   +GH   V    F P    + S     +++VWD
Sbjct: 215 IHIWKPSTRSL--LVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWD 261



 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 48/192 (25%), Positives = 82/192 (42%)
 Frame = +3

Query: 369 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 548
           H   + ++ F  +   +L+AS+D  +  W  QS   +  L GH   V   +F P   L  
Sbjct: 20  HRGEVNSSTFSPDGQRLLTASEDGCVYGWETQSGRLLWKLGGHTGPVKFCRFSPDGRLFA 79

Query: 549 SASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWA 728
           S S D T+R+WD++ +                                VL+GH R V   
Sbjct: 80  STSSDCTIRLWDVAKVE----------------------------CLQVLKGHQRSVETV 111

Query: 729 AFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDK 908
           +F P    + SG  D++V +W +   +   +    GH +++  + F P  + + + S D 
Sbjct: 112 SFSPDSKQLASGGWDKRVMLWEVQSGQV--LRHLVGHRDSIQSSDFAPSSDCLATGSWDS 169

Query: 909 SIRVWDMSKQTG 944
           +IR+WD+   TG
Sbjct: 170 TIRMWDLRGGTG 181



 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 51/228 (22%), Positives = 84/228 (36%), Gaps = 44/228 (19%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV 257
           E ++G +L K    +  VK   F P      ++  +  I+LWD      +     H   V
Sbjct: 49  ETQSGRLLWKLGGHTGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSV 108

Query: 258 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--------------- 392
             + F        SGG D ++ +W  +  + L  L+GH D I+++               
Sbjct: 109 ETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWD 168

Query: 393 --------------FFHHE---------------YPWILSASDDQTIRVWNWQSRTCVCV 485
                          FH E               +  + S S D+TI +W   +R+ +  
Sbjct: 169 STIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQ 228

Query: 486 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVE 629
           L GH  +V    F P    + SA    TV+VWD +  R  +   G ++
Sbjct: 229 LKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLD 276



 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCT---LIDKFDEHD 248
           E ++G +L         ++   F P    + T   +  I++WD R  T      + + H 
Sbjct: 133 EVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHR 192

Query: 249 GPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSA 428
           G +  + F     L  SG  D  I +W    R  L  L GH+ ++++  F  +   + SA
Sbjct: 193 GNISCLCF-SAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASA 251

Query: 429 SDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQ 566
               T++VW+  +  C   L G         F P   L+VS + DQ
Sbjct: 252 GYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 297


>ref|XP_001927805.1| PREDICTED: WD repeat-containing protein 38-like [Sus scrofa].
          Length = 312

 Score =  101 bits (252), Expect = 6e-22
 Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 2/289 (0%)
 Frame = +3

Query: 66  INSSEPET--GGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFD 239
           +NS  P T   G +  +      V   +F P    +LT+  +G +  W+ +   L+ K  
Sbjct: 1   MNSGAPGTLAVGRVKFYCRHRGEVNSSTFSPDGQRLLTASEDGCVYGWETQSGRLLWKLG 60

Query: 240 EHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWI 419
            H GPV+   F     LF S   D  I++W+     CL  L GH   + T  F  +   +
Sbjct: 61  GHTGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQL 120

Query: 420 LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR 599
            S   D+ + +W  QS   +  L GH   +  + F PS D + + S D T+R+W      
Sbjct: 121 ASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMW------ 174

Query: 600 KKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQ 779
                              DL G T A+    LEGH   ++   F     L+ SG+ D+ 
Sbjct: 175 -------------------DLRGGTGAIFHQELEGHRGNISCLCF-SAFGLLASGSWDKT 214

Query: 780 VKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWD 926
           + IW+ +      +   +GH   V    F P    + S     +++VWD
Sbjct: 215 IHIWKPSTRSL--LVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWD 261



 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 48/192 (25%), Positives = 82/192 (42%)
 Frame = +3

Query: 369 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 548
           H   + ++ F  +   +L+AS+D  +  W  QS   +  L GH   V   +F P   L  
Sbjct: 20  HRGEVNSSTFSPDGQRLLTASEDGCVYGWETQSGRLLWKLGGHTGPVKFCRFSPDGRLFA 79

Query: 549 SASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWA 728
           S S D T+R+WD++ +                                VL+GH R V   
Sbjct: 80  STSSDCTIRLWDVAKVE----------------------------CLQVLKGHQRSVETV 111

Query: 729 AFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDK 908
           +F P    + SG  D++V +W +   +   +    GH +++  + F P  + + + S D 
Sbjct: 112 SFSPDSKQLASGGWDKRVMLWEVQSGQV--LRHLVGHRDSIQSSDFAPSSDCLATGSWDS 169

Query: 909 SIRVWDMSKQTG 944
           +IR+WD+   TG
Sbjct: 170 TIRMWDLRGGTG 181



 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 51/228 (22%), Positives = 84/228 (36%), Gaps = 44/228 (19%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV 257
           E ++G +L K    +  VK   F P      ++  +  I+LWD      +     H   V
Sbjct: 49  ETQSGRLLWKLGGHTGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSV 108

Query: 258 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--------------- 392
             + F        SGG D ++ +W  +  + L  L+GH D I+++               
Sbjct: 109 ETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWD 168

Query: 393 --------------FFHHE---------------YPWILSASDDQTIRVWNWQSRTCVCV 485
                          FH E               +  + S S D+TI +W   +R+ +  
Sbjct: 169 STIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQ 228

Query: 486 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVE 629
           L GH  +V    F P    + SA    TV+VWD +  R  +   G ++
Sbjct: 229 LKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLD 276



 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCT---LIDKFDEHD 248
           E ++G +L         ++   F P    + T   +  I++WD R  T      + + H 
Sbjct: 133 EVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHR 192

Query: 249 GPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSA 428
           G +  + F     L  SG  D  I +W    R  L  L GH+ ++++  F  +   + SA
Sbjct: 193 GNISCLCF-SAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASA 251

Query: 429 SDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQ 566
               T++VW+  +  C   L G         F P   L+VS + DQ
Sbjct: 252 GYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 297


>ref|XP_003358840.1| PREDICTED: WD repeat-containing protein 5B-like [Sus scrofa].
          Length = 330

 Score =  100 bits (250), Expect = 1e-21
 Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 3/300 (1%)
 Frame = +3

Query: 129  VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
            V  + F P   W+ +S  + VI +W             H   +  + +       VS  D
Sbjct: 44   VSSVKFSPNGEWLASSSADKVIIIWGAYDGKYEKALKGHSLEISDVAWSSDSGRLVSASD 103

Query: 309  DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
            D  +K+W+ ++ +CL TL GH +Y+    F+     I+S S D+++++W  ++  C+  L
Sbjct: 104  DKTLKIWDVRVGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDESVKIWEVKTGRCLKTL 163

Query: 489  TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
            + H+  V    F+    L+VS S D   R+WD                            
Sbjct: 164  SAHSDPVSAVHFNCKGSLIVSGSYDGVCRIWD---------------------------A 196

Query: 669  TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             +   +K +++  +  +++  F P    I+    D  +K+W  +  +   + T  GH N 
Sbjct: 197  ASGQCLKTLVDDDNPPISFVKFSPNGKYILIATLDNTLKLWDYSRGRC--LKTYTGHKNE 254

Query: 849  VSCAVFH---PRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
              C   +      + I+S S+D  + +W++  +  VQ  +   D     A HPT N++A+
Sbjct: 255  KYCIFANFSVTSGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENIIAS 314



 Score = 86.3 bits (212), Expect = 3e-17
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR----MCTLIDKFDEH 245
           E +TG  L      S  V  + F+ K   I++  ++GV ++WD      + TL+   D+ 
Sbjct: 153 EVKTGRCLKTLSAHSDPVSAVHFNCKGSLIVSGSYDGVCRIWDAASGQCLKTLV---DDD 209

Query: 246 DGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLD---YIRTTFFHHEYPW 416
           + P+  + F       +    D  +K+W+Y   RCL T  GH +    I   F      W
Sbjct: 210 NPPISFVKFSPNGKYILIATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTSGKW 269

Query: 417 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL--DQTVRVW 581
           I+S S+D  + +WN Q++  V  L GH   V+ A  HP+E+++ SA+L  D+TV++W
Sbjct: 270 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENIIASAALGNDKTVKLW 326



 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 58/212 (27%), Positives = 91/212 (42%)
 Frame = +3

Query: 330 NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYV 509
           NY L+   FTL+GH + + +  F     W+ S+S D+ I +W          L GH+  +
Sbjct: 30  NYTLK---FTLVGHTEAVSSVKFSPNGEWLASSSADKVIIIWGAYDGKYEKALKGHSLEI 86

Query: 510 MCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVK 689
               +      +VSAS D+T+++WD+                     G  L         
Sbjct: 87  SDVAWSSDSGRLVSASDDKTLKIWDVR-------------------VGKCL--------- 118

Query: 690 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 869
             L+GH   V    F+P   LI+SG+ D  VKIW +   +   + T   H + VS   F+
Sbjct: 119 KTLKGHSNYVFCCNFNPPSNLIISGSFDESVKIWEVKTGRC--LKTLSAHSDPVSAVHFN 176

Query: 870 PRQELILSYSDDKSIRVWDMSKQTGVQTFRRD 965
            +  LI+S S D   R+WD +    ++T   D
Sbjct: 177 CKGSLIVSGSYDGVCRIWDAASGQCLKTLVDD 208



 Score = 72.0 bits (175), Expect = 5e-13
 Identities = 47/184 (25%), Positives = 82/184 (44%)
 Frame = +3

Query: 420 LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR 599
           LS+S +Q+ +V    + T    L GH   V   +F P+ + + S+S D+ + +W      
Sbjct: 15  LSSSANQSKQVAEKPNYTLKFTLVGHTEAVSSVKFSPNGEWLASSSADKVIIIW------ 68

Query: 600 KKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQ 779
                                 G  D   +  L+GH   ++  A+      +VS +DD+ 
Sbjct: 69  ----------------------GAYDGKYEKALKGHSLEISDVAWSSDSGRLVSASDDKT 106

Query: 780 VKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFR 959
           +KIW +   K   + T +GH N V C  F+P   LI+S S D+S+++W++     ++T  
Sbjct: 107 LKIWDVRVGKC--LKTLKGHSNYVFCCNFNPPSNLIISGSFDESVKIWEVKTGRCLKTLS 164

Query: 960 RDHD 971
              D
Sbjct: 165 AHSD 168


>ref|XP_003362067.1| PREDICTED: f-box/WD repeat-containing protein 7 isoform 3 [Sus
           scrofa].
          Length = 589

 Score = 95.9 bits (237), Expect = 3e-20
 Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 16/242 (6%)
 Frame = +3

Query: 297 SGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC 476
           SG DD  +KVW+    +CL TL+GH   + ++        I+S S D+T++VWN ++  C
Sbjct: 278 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGEC 335

Query: 477 VCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG------AVESDV 638
           +  L GH   V C   H  E  VVS S D T+RVWDI   +  ++  G       V+ D 
Sbjct: 336 IHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 393

Query: 639 RGITGVDLFGTTDAVVK----------HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKI 788
           R +      G  D +VK          H L+GH   V    F      +VSG+ D  +++
Sbjct: 394 RRVVS----GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRV 447

Query: 789 WRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDH 968
           W +       + T  GH +  S      +  +++S + D ++++WD+     +QT +  +
Sbjct: 448 WDVETGNC--IHTLTGHQSLTS--GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPN 503

Query: 969 DH 974
            H
Sbjct: 504 KH 505



 Score = 88.6 bits (218), Expect = 5e-18
 Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 19/233 (8%)
 Frame = +3

Query: 288 LFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQS 467
           + +SG  D  +KVWN +   C+ TL GH   +R    H +   ++S S D T+RVW+ ++
Sbjct: 315 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIET 372

Query: 468 RTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVE 629
             C+ VL GH   V C Q+      VVS + D  V+VWD      +  L+       +++
Sbjct: 373 GQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 430

Query: 630 SDVRGITGVDLFGTTDAVVK----------HVLEGHDRGVNWAAFHPTMPLIVSGADDRQ 779
            D  GI  V   G+ D  ++          H L GH    +         ++VSG  D  
Sbjct: 431 FD--GIHVVS--GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADST 484

Query: 780 VKIWRMNESKAWEVDTCRG---HYNNVSCAVFHPRQELILSYSDDKSIRVWDM 929
           VKIW +   +   + T +G   H + V+C  F+  +  +++ SDD ++++WD+
Sbjct: 485 VKIWDIKTGQC--LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 533


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,991,378
Number of extensions: 734993
Number of successful extensions: 3574
Number of sequences better than 1.0e-05: 86
Number of HSP's gapped: 2729
Number of HSP's successfully gapped: 239
Length of query: 352
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 252
Effective length of database: 8,854,232
Effective search space: 2231266464
Effective search space used: 2231266464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-009777
         (1058 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_034068.3| coatomer subunit alpha [Mus musculus].               659   0.0  
Alignment   gi|NP_056642.1| coatomer subunit beta' [Mus musculus].               189   2e-48
Alignment   gi|NP_038653.1| platelet-activating factor acetylhydrolase IB s...   115   8e-26
Alignment   gi|NP_081630.2| POC1 centriolar protein homolog A [Mus musculus].    108   9e-24
Alignment   gi|NP_543124.1| WD repeat-containing protein 5 [Mus musculus].       106   3e-23
Alignment   gi|NP_082016.1| POC1 centriolar protein homolog B [Mus musculus].    103   3e-22
Alignment   gi|NP_081389.1| WD repeat-containing protein 5B [Mus musculus].      102   7e-22
Alignment   gi|NP_083081.2| katanin p80 WD40-containing subunit B1 [Mus mus...    99   6e-21
Alignment   gi|NP_083436.2| sperm-associated antigen 16 protein isoform 1 [...    98   1e-20
Alignment   gi|NP_080004.1| sperm-associated antigen 16 protein isoform 2 [...    98   1e-20

>ref|NP_034068.3| coatomer subunit alpha [Mus musculus].
          Length = 1224

 Score =  659 bits (1700), Expect = 0.0
 Identities = 309/317 (97%), Positives = 311/317 (98%)
 Frame = +3

Query: 96   MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
            MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
Sbjct: 1    MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60

Query: 276  KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
Sbjct: 61   KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120

Query: 456  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 635
            NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
Sbjct: 121  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180

Query: 636  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 815
            VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
Sbjct: 181  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240

Query: 816  EVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAH 995
            EVDTCRGHYNNVSCAVFHPRQELILS S+DKSIRVWDMSK+TGVQTFRRDHD FWVLAAH
Sbjct: 241  EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300

Query: 996  PTFNLLAARHDGGMIVF 1046
            P  NL AA HDGGMIVF
Sbjct: 301  PNLNLFAAGHDGGMIVF 317


>ref|NP_056642.1| coatomer subunit beta' [Mus musculus].
          Length = 905

 Score =  189 bits (481), Expect = 2e-48
 Identities = 109/317 (34%), Positives = 161/317 (50%), Gaps = 4/317 (1%)
 Frame = +3

Query: 105  KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 10   KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69

Query: 285  PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 70   NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129

Query: 465  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 638
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 130  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177

Query: 639  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 812
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 178  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 221

Query: 813  WEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAA 992
              V T  GH  NVSCA FHP   +I++ S+D ++R+W  S      T     +  W +A+
Sbjct: 222  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 279

Query: 993  HPTFNLLAARHDGGMIV 1043
                N +A  +D G I+
Sbjct: 280  LRGSNNVALGYDEGSII 296


>ref|NP_038653.1| platelet-activating factor acetylhydrolase IB subunit alpha [Mus
           musculus].
          Length = 410

 Score =  115 bits (287), Expect = 8e-26
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
 Frame = +3

Query: 243 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
           H  PV  + FH    + VS  +D  IKVW+Y+      TL GH D ++   F H    + 
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI----- 587
           S S D TI++W++Q   C+  + GH+H V      P+ D +VSAS D+T+++W++     
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226

Query: 588 ----SGLRK-----KNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 740
               +G R+     +    G + +       V ++       K  L  H+  V   ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286

Query: 741 TM--------------------PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                                 P ++SG+ D+ +K+W ++      + T  GH N V   
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344

Query: 861 VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHF 977
           +FH   + ILS +DDK++RVWD   +  ++T    H+HF
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382



 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = +3

Query: 276 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
           K  P  +SG  D  IK+W+     CL TL+GH +++R   FH    +ILS +DD+T+RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 456 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 584
           +++++ C+  L  H H+V    FH +   VV+ S+DQTV+VW+
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
 Frame = +3

Query: 354 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 533
           + L GH   +    FH  +  ++SAS+D TI+VW++++      L GH   V    F  S
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161

Query: 534 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 713
             L+ S S D T+++WD  G                                  + GHD 
Sbjct: 162 GKLLASCSADMTIKLWDFQGFE----------------------------CIRTMHGHDH 193

Query: 714 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE--LI 887
            V+  A  P    IVS + D+ +K+W +     + V T  GH   V   +  P Q+  LI
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWV--RMVRPNQDGTLI 249

Query: 888 LSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
            S S+D+++RVW ++ +   +   R+H+H
Sbjct: 250 ASCSNDQTVRVWVVATKE-CKAELREHEH 277



 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = +3

Query: 159 PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
           P++L+   +  I++WD      +     HD  VRG+ FH      +S  DD  ++VW+YK
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368

Query: 339 LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            +RC+ TL  H  ++ +  FH   P++++ S DQT++VW
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%)
 Frame = +3

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
           K+ L GH   V    FHP   ++VS ++D  +K+W   E+  +E  T +GH ++V    F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
               +L+ S S D +I++WD      ++T    HDH
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDH 193


>ref|NP_081630.2| POC1 centriolar protein homolog A [Mus musculus].
          Length = 405

 Score =  108 bits (269), Expect = 9e-24
 Identities = 68/273 (24%), Positives = 118/273 (43%)
 Frame = +3

Query: 105 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
           +F      V  ++F P    + +   +  +++W   +      F  H   VR + F    
Sbjct: 56  RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115

Query: 285 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
              V+  DD  +KVW+   +R LF+L  H++++R   F  +   I+SASDD+T+++W+  
Sbjct: 116 QSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175

Query: 465 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG 644
           SR C+     H  +V    FHPS   + +A +D TV+VWD                    
Sbjct: 176 SRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-------------------- 215

Query: 645 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVD 824
                    T  +++H  + H   VN  +FHP+   +++ + D  +KI  + E +   + 
Sbjct: 216 -------ARTHRLLQH-YQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRL--LY 265

Query: 825 TCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
           T  GH    +   F    E   S   D+ + VW
Sbjct: 266 TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 4/253 (1%)
 Frame = +3

Query: 183 NGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL 362
           +  + +W  +  +   +F  H   V  ++F     L  SG  D  +++W   ++      
Sbjct: 40  DSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 99

Query: 363 LGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDL 542
             H   +R+  F  +   +++ASDD+T++VW+   +  +  LT H ++V CA+F P   L
Sbjct: 100 RAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRL 159

Query: 543 VVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVN 722
           +VSAS D+TV++WD                             T     H    H   V 
Sbjct: 160 IVSASDDKTVKLWD----------------------------KTSRECIHSYCEHGGFVT 191

Query: 723 WAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV----FHPRQELIL 890
           +  FHP+   I +   D  VK+W     +  +      HY   S AV    FHP    ++
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQ------HYQLHSAAVNALSFHPSGNYLI 245

Query: 891 SYSDDKSIRVWDM 929
           + S D ++++ D+
Sbjct: 246 TASSDSTLKILDL 258



 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 55/240 (22%), Positives = 95/240 (39%)
 Frame = +3

Query: 81  PETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVR 260
           P   G  T F   +A V+ + F      ++T+  +  +++W       +    +H   VR
Sbjct: 90  PNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR 149

Query: 261 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 440
              F     L VS  DD  +K+W+   R C+ +   H  ++    FH     I +A  D 
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209

Query: 441 TIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 620
           T++VW+ ++   +     H+  V    FHPS + +++AS D T+++ D+           
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL----------- 258

Query: 621 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 800
                             +  + + L GH       AF  T     SG  D QV +W+ N
Sbjct: 259 -----------------MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301



 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 57/218 (26%), Positives = 91/218 (41%)
 Frame = +3

Query: 366  GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLV 545
            GH D +    F      + S S D T+ +W+ + ++     TGH   V C  F PS  L+
Sbjct: 17   GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76

Query: 546  VSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNW 725
             S S D+TVR+W                  V  + G             V   H   V  
Sbjct: 77   ASGSRDKTVRIW------------------VPNVKGEST----------VFRAHTATVRS 108

Query: 726  AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDD 905
              F      +V+ +DD+ VK+W  +  +   + +   H N V CA F P   LI+S SDD
Sbjct: 109  VHFCSDGQSLVTASDDKTVKVWSTHRQRF--LFSLTQHINWVRCAKFSPDGRLIVSASDD 166

Query: 906  KSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            K++++WD + +  + ++         +  HP+   +AA
Sbjct: 167  KTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAA 204



 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 66/260 (25%), Positives = 98/260 (37%)
 Frame = +3

Query: 234  FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP 413
            F  H   V  +DF        SG  D  + +W+ K +   +   GH D +    F     
Sbjct: 15   FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74

Query: 414  WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 593
             + S S D+T+R+W    +    V   H   V    F      +V+AS D+TV+VW    
Sbjct: 75   LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134

Query: 594  LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 773
             R                    LF  T          H   V  A F P   LIVS +DD
Sbjct: 135  QR-------------------FLFSLTQ---------HINWVRCAKFSPDGRLIVSASDD 166

Query: 774  RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQT 953
            + VK+W     +   + +   H   V+   FHP    I +   D +++VWD      +Q 
Sbjct: 167  KTVKLWDKTSREC--IHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQH 224

Query: 954  FRRDHDHFWVLAAHPTFNLL 1013
            ++        L+ HP+ N L
Sbjct: 225  YQLHSAAVNALSFHPSGNYL 244



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 24/84 (28%), Positives = 41/84 (48%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV 257
           +  T  +L  ++  SA V  LSFHP   +++T+  +  +++ D     L+     H GP 
Sbjct: 215 DARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 274

Query: 258 RGIDFHKQQPLFVSGGDDYKIKVW 329
             + F +    F SGG D ++ VW
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVW 298


>ref|NP_543124.1| WD repeat-containing protein 5 [Mus musculus].
          Length = 334

 Score =  106 bits (265), Expect = 3e-23
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 3/300 (1%)
 Frame = +3

Query: 129  VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
            V  + F P   W+ +S  + +I++W             H   +  + +     L VS  D
Sbjct: 48   VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107

Query: 309  DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
            D  +K+W+    +CL TL GH +Y+    F+ +   I+S S D+++R+W+ ++  C+  L
Sbjct: 108  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167

Query: 489  TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
              H+  V    F+    L+VS+S D   R+WD +                          
Sbjct: 168  PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-------------------------- 201

Query: 669  TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             +   +K +++  +  V++  F P    I++   D  +K+W  ++ K   + T  GH N 
Sbjct: 202  -SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNE 258

Query: 849  VSCAVFH---PRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
              C   +      + I+S S+D  + +W++  +  VQ  +   D     A HPT N++A+
Sbjct: 259  KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318



 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR----MCTLIDKFDEHDG 251
           +TG  L      S  V  + F+     I++S ++G+ ++WD      + TLID   + + 
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID---DDNP 215

Query: 252 PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP---WIL 422
           PV  + F       ++   D  +K+W+Y   +CL T  GH +     F +       WI+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL--DQTVRVW 581
           S S+D  + +WN Q++  V  L GH   V+    HP+E+++ SA+L  D+T+++W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330



 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 58/212 (27%), Positives = 90/212 (42%)
 Frame = +3

Query: 330 NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYV 509
           NY L+   FTL GH   + +  F     W+ S+S D+ I++W          ++GH   +
Sbjct: 34  NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90

Query: 510 MCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVK 689
               +    +L+VSAS D+T+++WD+S                                 
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVS----------------------------SGKCL 122

Query: 690 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 869
             L+GH   V    F+P   LIVSG+ D  V+IW +   K   + T   H + VS   F+
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFN 180

Query: 870 PRQELILSYSDDKSIRVWDMSKQTGVQTFRRD 965
               LI+S S D   R+WD +    ++T   D
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212



 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 53/186 (28%), Positives = 85/186 (45%)
 Frame = +3

Query: 486  LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLF 665
            L GH   V   +F P+ + + S+S D+ +++W                            
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---------------------------- 72

Query: 666  GTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYN 845
            G  D   +  + GH  G++  A+     L+VS +DD+ +KIW ++  K   + T +GH N
Sbjct: 73   GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSN 130

Query: 846  NVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAARH 1025
             V C  F+P+  LI+S S D+S+R+WD+     ++T     D   V A H  FN      
Sbjct: 131  YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVH--FN-----R 181

Query: 1026 DGGMIV 1043
            DG +IV
Sbjct: 182  DGSLIV 187



 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
 Frame = +3

Query: 87  TGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 266
           +G  L   +  S  V   +F+P+   I++   +  +++WD +    +     H  PV  +
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177

Query: 267 DFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTF--FHHEYPWILSASDDQ 440
            F++   L VS   D   ++W+    +CL TL+   D    +F  F     +IL+A+ D 
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDN 236

Query: 441 TIRVWNWQSRTCVCVLTGHNH--YVMCAQFH-PSEDLVVSASLDQTVRVWDISGLRKKNL 611
           T+++W++    C+   TGH +  Y + A F       +VS S D  V +W++        
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ------- 289

Query: 612 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGA--DDRQVK 785
                              T + V K  L+GH   V   A HPT  +I S A  +D+ +K
Sbjct: 290 -------------------TKEIVQK--LQGHTDVVISTACHPTENIIASAALENDKTIK 328

Query: 786 IWR 794
           +W+
Sbjct: 329 LWK 331



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 30/112 (26%), Positives = 57/112 (50%)
 Frame = +3

Query: 684  VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV 863
            +K  L GH + V+   F P    + S + D+ +KIW   + K  +  T  GH   +S   
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVA 94

Query: 864  FHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            +     L++S SDDK++++WD+S    ++T +   ++ +    +P  NL+ +
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146


>ref|NP_082016.1| POC1 centriolar protein homolog B [Mus musculus].
          Length = 476

 Score =  103 bits (256), Expect = 3e-22
 Identities = 67/265 (25%), Positives = 117/265 (44%)
 Frame = +3

Query: 129 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
           V  L F P+   + ++  +  ++LW         +F  H  PVR +DF     L V+  +
Sbjct: 63  VTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE 122

Query: 309 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
           D  IKVW+   +R L++L  H  ++R   F  +   I+S S+D+TI++W+  ++ CV   
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182

Query: 489 TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
           +    +     F+P+   + SA  D  V++WDI                           
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHAVKIWDI--------------------------- 215

Query: 669 TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             + +++H  + H  GVN  +FHP    +V+ + D  VK+  + E +   + T +GH   
Sbjct: 216 RMNKLLQH-YQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRL--IYTLQGHTGP 272

Query: 849 VSCAVFHPRQELILSYSDDKSIRVW 923
           V    F    EL+ S   D  + +W
Sbjct: 273 VFTVSFSKDGELLTSGGADAQVLIW 297



 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 1/267 (0%)
 Frame = +3

Query: 234  FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP 413
            F  H   +   DF        +   D  + +W+ K     +  +GH D + +  F  +  
Sbjct: 14   FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73

Query: 414  WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 593
             + SAS D+T+R+W    +        H   V    F     L+V+AS D++++VW  S 
Sbjct: 74   LLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW--SM 131

Query: 594  LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 773
             R++ L                          + L  H   V  A F P   LIVS ++D
Sbjct: 132  FRQRFL--------------------------YSLYRHTHWVRCAKFSPDGRLIVSCSED 165

Query: 774  RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQT 953
            + +KIW     +   V+         +   F+P    I S   D ++++WD+     +Q 
Sbjct: 166  KTIKIWDTTNKQC--VNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQH 223

Query: 954  FRRDHDHFWVLAAHPTFN-LLAARHDG 1031
            ++        L+ HP  N L+ A  DG
Sbjct: 224  YQVHSCGVNCLSFHPLGNSLVTASSDG 250


>ref|NP_081389.1| WD repeat-containing protein 5B [Mus musculus].
          Length = 328

 Score =  102 bits (253), Expect = 7e-22
 Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 20/279 (7%)
 Frame = +3

Query: 243  HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
            H   +  + F        S   D  I +W      C  TL GH   I    +  +   ++
Sbjct: 38   HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV 97

Query: 423  SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI-SGLR 599
            SASDD+T++VW+ +S  C+  L GH+ +V C  F+P  +L+VS S D++V++W++ +G  
Sbjct: 98   SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKC 157

Query: 600  KKNLSP-----GAVESDVRGITGVDLFGTTDAV-----------VKHVLEGHDRGVNWAA 731
             K LS       AV  +  G   + + G+ D +           ++ + +  +  V++  
Sbjct: 158  LKTLSAHSDPISAVNFNCNG--SLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVK 215

Query: 732  FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSC--AVFH-PRQELILSYSD 902
            F P    I++   D  +K+W  +  +   + T  GH N   C  A F    ++ ++S S+
Sbjct: 216  FSPNGKYILTATLDNTLKLWDYSRGRC--LKTYTGHKNEKYCLFASFSVTGRKWVVSGSE 273

Query: 903  DKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            D  + +W++  +  VQ  +   D     A HPT N++A+
Sbjct: 274  DNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIAS 312



 Score = 91.7 bits (226), Expect = 9e-19
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 4/257 (1%)
 Frame = +3

Query: 165 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLR 344
           ++++  +  +++WD R    +     H   V   DF+    L VSG  D  +K+W  K  
Sbjct: 96  LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTG 155

Query: 345 RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGH-NHYVMCAQ 521
           +CL TL  H D I    F+     I+S S D   R+W+  S  C+  L    N  V   +
Sbjct: 156 KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVK 215

Query: 522 FHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLE 701
           F P+   +++A+LD T+++WD S  R      G                           
Sbjct: 216 FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG--------------------------H 249

Query: 702 GHDRGVNWAAFHPT-MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 878
            +++   +A+F  T    +VSG++D  V IW +   +   V   +GH + V  A  HP +
Sbjct: 250 KNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEI--VQRLQGHTDVVISAACHPTK 307

Query: 879 ELILS--YSDDKSIRVW 923
            +I S    +DK+I+VW
Sbjct: 308 NIIASAALENDKTIKVW 324



 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
 Frame = +3

Query: 78  EPETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKF-DEHDGP 254
           E +TG  L      S  +  ++F+     I++  ++G+ ++WD      +    DE + P
Sbjct: 151 EVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP 210

Query: 255 VRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDY---IRTTFFHHEYPWILS 425
           V  + F       ++   D  +K+W+Y   RCL T  GH +    +  +F      W++S
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVS 270

Query: 426 ASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL--DQTVRVW 581
            S+D  + +WN Q++  V  L GH   V+ A  HP+++++ SA+L  D+T++VW
Sbjct: 271 GSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324



 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 61/209 (29%), Positives = 87/209 (41%), Gaps = 1/209 (0%)
 Frame = +3

Query: 330 NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYV 509
           NY LR    TL GH   I +  F     W+ S++ D  I +W      C   L GH+  +
Sbjct: 28  NYALR---LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEI 84

Query: 510 MCAQFHPSEDLVVSASLDQTVRVWDI-SGLRKKNLSPGAVESDVRGITGVDLFGTTDAVV 686
               +      +VSAS D+T++VWD+ SG   K                           
Sbjct: 85  SDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLK--------------------------- 117

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
              L+GH   V    F+P   LIVSG+ D  VKIW +   K   + T   H + +S   F
Sbjct: 118 --TLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKC--LKTLSAHSDPISAVNF 173

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQT 953
           +    LI+S S D   R+WD +    ++T
Sbjct: 174 NCNGSLIVSGSYDGLCRIWDAASGQCLRT 202



 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
 Frame = +3

Query: 144 FHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIK 323
           F+P    I++   +  +++W+ +    +     H  P+  ++F+    L VSG  D   +
Sbjct: 131 FNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCR 190

Query: 324 VWNYKLRRCLFTLLGH----LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 491
           +W+    +CL TL       + +++   F     +IL+A+ D T+++W++    C+   T
Sbjct: 191 IWDAASGQCLRTLADEGNPPVSFVK---FSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 247

Query: 492 GHNH--YVMCAQFH-PSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 662
           GH +  Y + A F       VVS S D  V +W++                         
Sbjct: 248 GHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQ------------------------ 283

Query: 663 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGA--DDRQVKIW 791
              T  +V+  L+GH   V  AA HPT  +I S A  +D+ +K+W
Sbjct: 284 ---TKEIVQR-LQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324


>ref|NP_083081.2| katanin p80 WD40-containing subunit B1 [Mus musculus].
          Length = 658

 Score = 99.0 bits (245), Expect = 6e-21
 Identities = 67/244 (27%), Positives = 106/244 (43%)
 Frame = +3

Query: 192 IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH 371
           + LW       I     H  PV  +  +  + L V+G     I+VW+ +  + L TL+GH
Sbjct: 45  VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104

Query: 372 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 551
              I +  FH    ++ S S D  I++W+ + + CV    GH+  V C +F P    + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164

Query: 552 ASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAA 731
           A+ D TV++WD        L+ G + S+  G TG                     VN   
Sbjct: 165 AADDHTVKLWD--------LTAGKMMSEFPGHTG--------------------PVNVVE 196

Query: 732 FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKS 911
           FHP   L+ SG+ DR ++ W + + +   V    G    V   +F+P    + S   D S
Sbjct: 197 FHPNEYLLASGSSDRTIRFWDLEKFQV--VSCIEGEPGPVRSVLFNPDGCCLYSGCQD-S 253

Query: 912 IRVW 923
           +RV+
Sbjct: 254 LRVY 257



 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
 Frame = +3

Query: 129 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
           V+ +  +     I+    +G I++WD     ++     H   +  +DFH       SG  
Sbjct: 66  VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125

Query: 309 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
           D  IK+W+ + + C+F   GH   +R   F  +  W+ SA+DD T+++W+  +   +   
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185

Query: 489 TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNL---SPGAVES 632
            GH   V   +FHP+E L+ S S D+T+R WD+   +  +     PG V S
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 14/187 (7%)
 Frame = +3

Query: 417 ILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGL 596
           + +  DD  + +W+     C+  LTGH   V   + +  E+L+V+ S   ++RVWD+   
Sbjct: 36  LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95

Query: 597 R--------KKNLSP------GAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAF 734
           +        K N+        G   +     T + L+            GH + V    F
Sbjct: 96  KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155

Query: 735 HPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSI 914
            P    + S ADD  VK+W +   K   +    GH   V+   FHP + L+ S S D++I
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKM--MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213

Query: 915 RVWDMSK 935
           R WD+ K
Sbjct: 214 RFWDLEK 220



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 41/166 (24%), Positives = 69/166 (41%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRG 263
           E   +L       A +  L FHP   ++ +   +  I+LWD R    + ++  H   VR 
Sbjct: 93  EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152

Query: 264 IDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQT 443
           + F        S  DD+ +K+W+    + +    GH   +    FH     + S S D+T
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212

Query: 444 IRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 581
           IR W+ +    V  + G    V    F+P    + S   D ++RV+
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257



 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 31/111 (27%), Positives = 50/111 (45%)
 Frame = +3

Query: 696  LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 875
            L GH   V     +    LIV+G+    +++W +  +K   + T  GH  N+    FHP 
Sbjct: 59   LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPY 116

Query: 876  QELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAARHD 1028
             E + S S D +I++WD+ ++  V  +R        L   P    LA+  D
Sbjct: 117  GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167


>ref|NP_083436.2| sperm-associated antigen 16 protein isoform 1 [Mus musculus].
          Length = 639

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 66/259 (25%), Positives = 108/259 (41%)
 Frame = +3

Query: 159  PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
            P + +   N     +DY++  +   F  H+ PV  I  H  +   +S  +D   K+    
Sbjct: 334  PNVTSCTENVSAAKFDYKLNNI---FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLP 390

Query: 339  LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCA 518
                L T  GH D++    FH     + ++S D TI++W+     C   L GHNH V   
Sbjct: 391  QGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSC 450

Query: 519  QFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVL 698
             +H   D V SASLD T ++WD++  R                             ++ L
Sbjct: 451  TWHSCGDFVASASLDMTSKIWDVNSER----------------------------CRYTL 482

Query: 699  EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 878
             GH   VN   F P   ++++ + D+ + +W     K  +  +  GH ++V+ A F PR 
Sbjct: 483  YGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQ--SLYGHMHSVNDATFTPRG 540

Query: 879  ELILSYSDDKSIRVWDMSK 935
             +I S       ++WD  K
Sbjct: 541  HIIASCDARGVTKLWDFRK 559



 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 16/237 (6%)
 Frame = +3

Query: 129  VKGLSFHPKRPWILTSLHNGVIQLWDYRM--CTLIDKFDEHDGPVRGIDFHKQQPLFVSG 302
            + G  FHP    + TS  +  I+LWD     CTL    + H+  V    +H       S 
Sbjct: 405  LSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLT--LEGHNHAVWSCTWHSCGDFVASA 462

Query: 303  GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVC 482
              D   K+W+    RC +TL GH D + +  F      +L+AS D+T+ VW+ ++  C  
Sbjct: 463  SLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQ 522

Query: 483  VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI--------------SGLRKKNLSPG 620
             L GH H V  A F P   ++ S       ++WD               SG        G
Sbjct: 523  SLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSG 582

Query: 621  AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIW 791
             V +       + L       + H L GH+  V+   F      + SG  D  +++W
Sbjct: 583  RVLAQASANGIIHLLDLKSGQI-HKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638



 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 40/173 (23%), Positives = 70/173 (40%)
 Frame = +3

Query: 495  HNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTT 674
            H   V C   HP  D ++S S D   R+W + GL + N+           +TG       
Sbjct: 359  HELPVSCIVMHPCRDYLISCSED---RLWKMVGLPQGNVL----------LTG------- 398

Query: 675  DAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 854
                     GH   ++   FHP+   + + + D  +K+W +N+ +     T  GH + V 
Sbjct: 399  --------SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGEC--TLTLEGHNHAVW 448

Query: 855  CAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLL 1013
               +H   + + S S D + ++WD++ +    T     D    +   P  N+L
Sbjct: 449  SCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNIL 501


>ref|NP_080004.1| sperm-associated antigen 16 protein isoform 2 [Mus musculus].
          Length = 310

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 66/259 (25%), Positives = 108/259 (41%)
 Frame = +3

Query: 159 PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
           P + +   N     +DY++  +   F  H+ PV  I  H  +   +S  +D   K+    
Sbjct: 5   PNVTSCTENVSAAKFDYKLNNI---FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLP 61

Query: 339 LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCA 518
               L T  GH D++    FH     + ++S D TI++W+     C   L GHNH V   
Sbjct: 62  QGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSC 121

Query: 519 QFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVL 698
            +H   D V SASLD T ++WD++  R                             ++ L
Sbjct: 122 TWHSCGDFVASASLDMTSKIWDVNSER----------------------------CRYTL 153

Query: 699 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 878
            GH   VN   F P   ++++ + D+ + +W     K  +  +  GH ++V+ A F PR 
Sbjct: 154 YGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQ--SLYGHMHSVNDATFTPRG 211

Query: 879 ELILSYSDDKSIRVWDMSK 935
            +I S       ++WD  K
Sbjct: 212 HIIASCDARGVTKLWDFRK 230



 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 16/237 (6%)
 Frame = +3

Query: 129 VKGLSFHPKRPWILTSLHNGVIQLWDYRM--CTLIDKFDEHDGPVRGIDFHKQQPLFVSG 302
           + G  FHP    + TS  +  I+LWD     CTL    + H+  V    +H       S 
Sbjct: 76  LSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLT--LEGHNHAVWSCTWHSCGDFVASA 133

Query: 303 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVC 482
             D   K+W+    RC +TL GH D + +  F      +L+AS D+T+ VW+ ++  C  
Sbjct: 134 SLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQ 193

Query: 483 VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI--------------SGLRKKNLSPG 620
            L GH H V  A F P   ++ S       ++WD               SG        G
Sbjct: 194 SLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSG 253

Query: 621 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIW 791
            V +       + L       + H L GH+  V+   F      + SG  D  +++W
Sbjct: 254 RVLAQASANGIIHLLDLKSGQI-HKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 309



 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 40/173 (23%), Positives = 70/173 (40%)
 Frame = +3

Query: 495  HNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTT 674
            H   V C   HP  D ++S S D   R+W + GL + N+           +TG       
Sbjct: 30   HELPVSCIVMHPCRDYLISCSED---RLWKMVGLPQGNVL----------LTG------- 69

Query: 675  DAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVS 854
                     GH   ++   FHP+   + + + D  +K+W +N+ +     T  GH + V 
Sbjct: 70   --------SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGEC--TLTLEGHNHAVW 119

Query: 855  CAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLL 1013
               +H   + + S S D + ++WD++ +    T     D    +   P  N+L
Sbjct: 120  SCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNIL 172


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,687,647
Number of extensions: 991915
Number of successful extensions: 4838
Number of sequences better than 1.0e-05: 113
Number of HSP's gapped: 3715
Number of HSP's successfully gapped: 309
Length of query: 352
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 250
Effective length of database: 12,553,887
Effective search space: 3138471750
Effective search space used: 3138471750
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-009777
         (1058 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001091868.1| coatomer subunit alpha isoform 1 [Homo sapie...   658   0.0  
Alignment   gi|NP_004362.2| coatomer subunit alpha isoform 2 [Homo sapiens].     658   0.0  
Alignment   gi|NP_004757.1| coatomer subunit beta' [Homo sapiens].               189   3e-48
Alignment   gi|NP_000421.1| platelet-activating factor acetylhydrolase IB s...   115   9e-26
Alignment   gi|NP_001155053.1| POC1 centriolar protein homolog A isoform 3 ...   110   3e-24
Alignment   gi|NP_001155052.1| POC1 centriolar protein homolog A isoform 2 ...   110   3e-24
Alignment   gi|NP_056241.3| POC1 centriolar protein homolog A isoform 1 [Ho...   110   3e-24
Alignment   gi|NP_438172.1| WD repeat-containing protein 5 [Homo sapiens].       106   3e-23
Alignment   gi|NP_060058.1| WD repeat-containing protein 5 [Homo sapiens].       106   3e-23
Alignment   gi|NP_001038941.1| WD repeat-containing protein 38 [Homo sapien...   103   2e-22

>ref|NP_001091868.1| coatomer subunit alpha isoform 1 [Homo sapiens].
          Length = 1233

 Score =  658 bits (1697), Expect = 0.0
 Identities = 308/317 (97%), Positives = 311/317 (98%)
 Frame = +3

Query: 96   MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
            MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
Sbjct: 1    MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60

Query: 276  KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
Sbjct: 61   KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120

Query: 456  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 635
            NWQSRTCVCVLTGHNHYVMCAQFHP+EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
Sbjct: 121  NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180

Query: 636  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 815
            VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
Sbjct: 181  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240

Query: 816  EVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAH 995
            EVDTCRGHYNNVSCAVFHPRQELILS S+DKSIRVWDMSK+TGVQTFRRDHD FWVLAAH
Sbjct: 241  EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300

Query: 996  PTFNLLAARHDGGMIVF 1046
            P  NL AA HDGGMIVF
Sbjct: 301  PNLNLFAAGHDGGMIVF 317


>ref|NP_004362.2| coatomer subunit alpha isoform 2 [Homo sapiens].
          Length = 1224

 Score =  658 bits (1697), Expect = 0.0
 Identities = 308/317 (97%), Positives = 311/317 (98%)
 Frame = +3

Query: 96   MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 275
            MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
Sbjct: 1    MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60

Query: 276  KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
Sbjct: 61   KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120

Query: 456  NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 635
            NWQSRTCVCVLTGHNHYVMCAQFHP+EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
Sbjct: 121  NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180

Query: 636  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 815
            VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
Sbjct: 181  VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW 240

Query: 816  EVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAH 995
            EVDTCRGHYNNVSCAVFHPRQELILS S+DKSIRVWDMSK+TGVQTFRRDHD FWVLAAH
Sbjct: 241  EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH 300

Query: 996  PTFNLLAARHDGGMIVF 1046
            P  NL AA HDGGMIVF
Sbjct: 301  PNLNLFAAGHDGGMIVF 317


>ref|NP_004757.1| coatomer subunit beta' [Homo sapiens].
          Length = 906

 Score =  189 bits (481), Expect = 3e-48
 Identities = 109/317 (34%), Positives = 161/317 (50%), Gaps = 4/317 (1%)
 Frame = +3

Query: 105  KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
            K   +S RVK +  HP  PW+L SL+NG + +W++   TL+  F+  D PVR   F  ++
Sbjct: 10   KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69

Query: 285  PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
               V+G DD +I+V+NY     +     H DYIR    H   P+IL++SDD  I++W+W 
Sbjct: 70   NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129

Query: 465  SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 638
             + +C  V  GH HYVM    +P + +   SASLD+T++VW +      + SP       
Sbjct: 130  KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177

Query: 639  RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVKIWRMNESKA 812
                               LEGH++GVN   ++     P ++SGADDR VKIW       
Sbjct: 178  ----------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC 221

Query: 813  WEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAA 992
              V T  GH  NVSCA FHP   +I++ S+D ++R+W  S      T     +  W +A+
Sbjct: 222  --VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVAS 279

Query: 993  HPTFNLLAARHDGGMIV 1043
                N +A  +D G I+
Sbjct: 280  LRGSNNVALGYDEGSII 296


>ref|NP_000421.1| platelet-activating factor acetylhydrolase IB subunit alpha [Homo
           sapiens].
          Length = 410

 Score =  115 bits (287), Expect = 9e-26
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
 Frame = +3

Query: 243 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 422
           H  PV  + FH    + VS  +D  IKVW+Y+      TL GH D ++   F H    + 
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI----- 587
           S S D TI++W++Q   C+  + GH+H V      P+ D +VSAS D+T+++W++     
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226

Query: 588 ----SGLRK-----KNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP 740
               +G R+     +    G + +       V ++       K  L  H+  V   ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286

Query: 741 TM--------------------PLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCA 860
                                 P ++SG+ D+ +K+W ++      + T  GH N V   
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344

Query: 861 VFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHF 977
           +FH   + ILS +DDK++RVWD   +  ++T    H+HF
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382



 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 42/103 (40%), Positives = 65/103 (63%)
 Frame = +3

Query: 276 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
           K  P  +SG  D  IK+W+     CL TL+GH +++R   FH    +ILS +DD+T+RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365

Query: 456 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD 584
           +++++ C+  L  H H+V    FH +   VV+ S+DQTV+VW+
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
 Frame = +3

Query: 354 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPS 533
           + L GH   +    FH  +  ++SAS+D TI+VW++++      L GH   V    F  S
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161

Query: 534 EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDR 713
             L+ S S D T+++WD  G                                  + GHD 
Sbjct: 162 GKLLASCSADMTIKLWDFQGFE----------------------------CIRTMHGHDH 193

Query: 714 GVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQE--LI 887
            V+  A  P    IVS + D+ +K+W +     + V T  GH   V   +  P Q+  LI
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWV--RMVRPNQDGTLI 249

Query: 888 LSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
            S S+D+++RVW ++ +   +   R+H+H
Sbjct: 250 ASCSNDQTVRVWVVATKE-CKAELREHEH 277



 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = +3

Query: 159 PWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYK 338
           P++L+   +  I++WD      +     HD  VRG+ FH      +S  DD  ++VW+YK
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368

Query: 339 LRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 455
            +RC+ TL  H  ++ +  FH   P++++ S DQT++VW
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407



 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%)
 Frame = +3

Query: 687 KHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVF 866
           K+ L GH   V    FHP   ++VS ++D  +K+W   E+  +E  T +GH ++V    F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158

Query: 867 HPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
               +L+ S S D +I++WD      ++T    HDH
Sbjct: 159 DHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDH 193


>ref|NP_001155053.1| POC1 centriolar protein homolog A isoform 3 [Homo sapiens].
          Length = 369

 Score =  110 bits (274), Expect = 3e-24
 Identities = 69/273 (25%), Positives = 119/273 (43%)
 Frame = +3

Query: 105 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
           +F      V  ++F P    + +   +  +++W   +      F  H   VR + F    
Sbjct: 18  RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 77

Query: 285 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
             FV+  DD  +KVW    ++ LF+L  H++++R   F  +   I+SASDD+T+++W+  
Sbjct: 78  QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 137

Query: 465 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG 644
           SR CV     H  +V    FHPS   + +A +D TV+VWD+                   
Sbjct: 138 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR------------------ 179

Query: 645 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVD 824
                    T  +++H  + H   VN  +FHP+   +++ + D  +KI  + E +   + 
Sbjct: 180 ---------THRLLQHY-QLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL--LY 227

Query: 825 TCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
           T  GH    +   F    E   S   D+ + VW
Sbjct: 228 TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260



 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 4/250 (1%)
 Frame = +3

Query: 192 IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH 371
           + +W  +  +   +F  H   V  ++F     L  SG  D  +++W   ++        H
Sbjct: 5   LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAH 64

Query: 372 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 551
              +R+  F  +    ++ASDD+T++VW    +  +  L+ H ++V CA+F P   L+VS
Sbjct: 65  TATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVS 124

Query: 552 ASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAA 731
           AS D+TV++WD S                                 H    H   V +  
Sbjct: 125 ASDDKTVKLWDKSSRE----------------------------CVHSYCEHGGFVTYVD 156

Query: 732 FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV----FHPRQELILSYS 899
           FHP+   I +   D  VK+W +   +  +      HY   S AV    FHP    +++ S
Sbjct: 157 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQ------HYQLHSAAVNGLSFHPSGNYLITAS 210

Query: 900 DDKSIRVWDM 929
            D ++++ D+
Sbjct: 211 SDSTLKILDL 220



 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 55/240 (22%), Positives = 94/240 (39%)
 Frame = +3

Query: 81  PETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVR 260
           P   G  T F   +A V+ + F       +T+  +  +++W       +    +H   VR
Sbjct: 52  PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVR 111

Query: 261 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 440
              F     L VS  DD  +K+W+   R C+ +   H  ++    FH     I +A  D 
Sbjct: 112 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 171

Query: 441 TIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 620
           T++VW+ ++   +     H+  V    FHPS + +++AS D T+++ D+           
Sbjct: 172 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL----------- 220

Query: 621 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 800
                             +  + + L GH       AF  T     SG  D QV +W+ N
Sbjct: 221 -----------------MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 263



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 54/195 (27%), Positives = 81/195 (41%)
 Frame = +3

Query: 435  DQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLS 614
            D  + VW+ + ++     TGH   V C  F PS  L+ S S D+TVR+W           
Sbjct: 2    DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW----------- 50

Query: 615  PGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWR 794
                   V  + G             V   H   V    F       V+ +DD+ VK+W 
Sbjct: 51   -------VPNVKGEST----------VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWA 93

Query: 795  MNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDH 974
             +  K   + +   H N V CA F P   LI+S SDDK++++WD S +  V ++      
Sbjct: 94   THRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF 151

Query: 975  FWVLAAHPTFNLLAA 1019
               +  HP+   +AA
Sbjct: 152  VTYVDFHPSGTCIAA 166



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 62/235 (26%), Positives = 94/235 (40%)
 Frame = +3

Query: 309  DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
            D  + VW+ K +   +   GH D +    F      + S S D+T+R+W    +    V 
Sbjct: 2    DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61

Query: 489  TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
              H   V    F       V+AS D+TV+VW  +  R+K L                   
Sbjct: 62   RAHTATVRSVHFCSDGQSFVTASDDKTVKVW--ATHRQKFL------------------- 100

Query: 669  TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
                     L  H   V  A F P   LIVS +DD+ VK+W  ++S    V +   H   
Sbjct: 101  -------FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKSSRECVHSYCEHGGF 151

Query: 849  VSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLL 1013
            V+   FHP    I +   D +++VWD+     +Q ++        L+ HP+ N L
Sbjct: 152  VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYL 206


>ref|NP_001155052.1| POC1 centriolar protein homolog A isoform 2 [Homo sapiens].
          Length = 359

 Score =  110 bits (274), Expect = 3e-24
 Identities = 69/273 (25%), Positives = 119/273 (43%)
 Frame = +3

Query: 105 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
           +F      V  ++F P    + +   +  +++W   +      F  H   VR + F    
Sbjct: 56  RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115

Query: 285 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
             FV+  DD  +KVW    ++ LF+L  H++++R   F  +   I+SASDD+T+++W+  
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175

Query: 465 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG 644
           SR CV     H  +V    FHPS   + +A +D TV+VWD+                   
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR------------------ 217

Query: 645 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVD 824
                    T  +++H  + H   VN  +FHP+   +++ + D  +KI  + E +   + 
Sbjct: 218 ---------THRLLQHY-QLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL--LY 265

Query: 825 TCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
           T  GH    +   F    E   S   D+ + VW
Sbjct: 266 TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 4/250 (1%)
 Frame = +3

Query: 192 IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH 371
           + +W  +  +   +F  H   V  ++F     L  SG  D  +++W   ++        H
Sbjct: 43  LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAH 102

Query: 372 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 551
              +R+  F  +    ++ASDD+T++VW    +  +  L+ H ++V CA+F P   L+VS
Sbjct: 103 TATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVS 162

Query: 552 ASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAA 731
           AS D+TV++WD S                                 H    H   V +  
Sbjct: 163 ASDDKTVKLWDKSSRE----------------------------CVHSYCEHGGFVTYVD 194

Query: 732 FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV----FHPRQELILSYS 899
           FHP+   I +   D  VK+W +   +  +      HY   S AV    FHP    +++ S
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQ------HYQLHSAAVNGLSFHPSGNYLITAS 248

Query: 900 DDKSIRVWDM 929
            D ++++ D+
Sbjct: 249 SDSTLKILDL 258



 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 60/218 (27%), Positives = 89/218 (40%)
 Frame = +3

Query: 366  GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLV 545
            GH D +    F      + S S D  + VW+ + ++     TGH   V C  F PS  L+
Sbjct: 17   GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76

Query: 546  VSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNW 725
             S S D+TVR+W                  V  + G             V   H   V  
Sbjct: 77   ASGSRDKTVRIW------------------VPNVKGEST----------VFRAHTATVRS 108

Query: 726  AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDD 905
              F       V+ +DD+ VK+W  +  K   + +   H N V CA F P   LI+S SDD
Sbjct: 109  VHFCSDGQSFVTASDDKTVKVWATHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDD 166

Query: 906  KSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            K++++WD S +  V ++         +  HP+   +AA
Sbjct: 167  KTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAA 204



 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 55/240 (22%), Positives = 94/240 (39%)
 Frame = +3

Query: 81  PETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVR 260
           P   G  T F   +A V+ + F       +T+  +  +++W       +    +H   VR
Sbjct: 90  PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVR 149

Query: 261 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 440
              F     L VS  DD  +K+W+   R C+ +   H  ++    FH     I +A  D 
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209

Query: 441 TIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 620
           T++VW+ ++   +     H+  V    FHPS + +++AS D T+++ D+           
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL----------- 258

Query: 621 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 800
                             +  + + L GH       AF  T     SG  D QV +W+ N
Sbjct: 259 -----------------MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301



 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 69/260 (26%), Positives = 102/260 (39%)
 Frame = +3

Query: 234  FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP 413
            F  H   V  +DF        SG  D  + VW+ K +   +   GH D +    F     
Sbjct: 15   FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74

Query: 414  WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 593
             + S S D+T+R+W    +    V   H   V    F       V+AS D+TV+VW  + 
Sbjct: 75   LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW--AT 132

Query: 594  LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 773
             R+K L                            L  H   V  A F P   LIVS +DD
Sbjct: 133  HRQKFL--------------------------FSLSQHINWVRCAKFSPDGRLIVSASDD 166

Query: 774  RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQT 953
            + VK+W  ++S    V +   H   V+   FHP    I +   D +++VWD+     +Q 
Sbjct: 167  KTVKLW--DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQH 224

Query: 954  FRRDHDHFWVLAAHPTFNLL 1013
            ++        L+ HP+ N L
Sbjct: 225  YQLHSAAVNGLSFHPSGNYL 244


>ref|NP_056241.3| POC1 centriolar protein homolog A isoform 1 [Homo sapiens].
          Length = 407

 Score =  110 bits (274), Expect = 3e-24
 Identities = 69/273 (25%), Positives = 119/273 (43%)
 Frame = +3

Query: 105 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 284
           +F      V  ++F P    + +   +  +++W   +      F  H   VR + F    
Sbjct: 56  RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115

Query: 285 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 464
             FV+  DD  +KVW    ++ LF+L  H++++R   F  +   I+SASDD+T+++W+  
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175

Query: 465 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG 644
           SR CV     H  +V    FHPS   + +A +D TV+VWD+                   
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR------------------ 217

Query: 645 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVD 824
                    T  +++H  + H   VN  +FHP+   +++ + D  +KI  + E +   + 
Sbjct: 218 ---------THRLLQHY-QLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL--LY 265

Query: 825 TCRGHYNNVSCAVFHPRQELILSYSDDKSIRVW 923
           T  GH    +   F    E   S   D+ + VW
Sbjct: 266 TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298



 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 4/250 (1%)
 Frame = +3

Query: 192 IQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGH 371
           + +W  +  +   +F  H   V  ++F     L  SG  D  +++W   ++        H
Sbjct: 43  LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAH 102

Query: 372 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 551
              +R+  F  +    ++ASDD+T++VW    +  +  L+ H ++V CA+F P   L+VS
Sbjct: 103 TATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVS 162

Query: 552 ASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAA 731
           AS D+TV++WD S                                 H    H   V +  
Sbjct: 163 ASDDKTVKLWDKSSRE----------------------------CVHSYCEHGGFVTYVD 194

Query: 732 FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV----FHPRQELILSYS 899
           FHP+   I +   D  VK+W +   +  +      HY   S AV    FHP    +++ S
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQ------HYQLHSAAVNGLSFHPSGNYLITAS 248

Query: 900 DDKSIRVWDM 929
            D ++++ D+
Sbjct: 249 SDSTLKILDL 258



 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 60/218 (27%), Positives = 89/218 (40%)
 Frame = +3

Query: 366  GHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLV 545
            GH D +    F      + S S D  + VW+ + ++     TGH   V C  F PS  L+
Sbjct: 17   GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76

Query: 546  VSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNW 725
             S S D+TVR+W                  V  + G             V   H   V  
Sbjct: 77   ASGSRDKTVRIW------------------VPNVKGEST----------VFRAHTATVRS 108

Query: 726  AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDD 905
              F       V+ +DD+ VK+W  +  K   + +   H N V CA F P   LI+S SDD
Sbjct: 109  VHFCSDGQSFVTASDDKTVKVWATHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDD 166

Query: 906  KSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            K++++WD S +  V ++         +  HP+   +AA
Sbjct: 167  KTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAA 204



 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 55/240 (22%), Positives = 94/240 (39%)
 Frame = +3

Query: 81  PETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVR 260
           P   G  T F   +A V+ + F       +T+  +  +++W       +    +H   VR
Sbjct: 90  PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVR 149

Query: 261 GIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQ 440
              F     L VS  DD  +K+W+   R C+ +   H  ++    FH     I +A  D 
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209

Query: 441 TIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 620
           T++VW+ ++   +     H+  V    FHPS + +++AS D T+++ D+           
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL----------- 258

Query: 621 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 800
                             +  + + L GH       AF  T     SG  D QV +W+ N
Sbjct: 259 -----------------MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301



 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 69/260 (26%), Positives = 102/260 (39%)
 Frame = +3

Query: 234  FDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP 413
            F  H   V  +DF        SG  D  + VW+ K +   +   GH D +    F     
Sbjct: 15   FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74

Query: 414  WILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISG 593
             + S S D+T+R+W    +    V   H   V    F       V+AS D+TV+VW  + 
Sbjct: 75   LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW--AT 132

Query: 594  LRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADD 773
             R+K L                            L  H   V  A F P   LIVS +DD
Sbjct: 133  HRQKFL--------------------------FSLSQHINWVRCAKFSPDGRLIVSASDD 166

Query: 774  RQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQT 953
            + VK+W  ++S    V +   H   V+   FHP    I +   D +++VWD+     +Q 
Sbjct: 167  KTVKLW--DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQH 224

Query: 954  FRRDHDHFWVLAAHPTFNLL 1013
            ++        L+ HP+ N L
Sbjct: 225  YQLHSAAVNGLSFHPSGNYL 244


>ref|NP_438172.1| WD repeat-containing protein 5 [Homo sapiens].
          Length = 334

 Score =  106 bits (265), Expect = 3e-23
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 3/300 (1%)
 Frame = +3

Query: 129  VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
            V  + F P   W+ +S  + +I++W             H   +  + +     L VS  D
Sbjct: 48   VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107

Query: 309  DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
            D  +K+W+    +CL TL GH +Y+    F+ +   I+S S D+++R+W+ ++  C+  L
Sbjct: 108  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167

Query: 489  TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
              H+  V    F+    L+VS+S D   R+WD +                          
Sbjct: 168  PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-------------------------- 201

Query: 669  TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             +   +K +++  +  V++  F P    I++   D  +K+W  ++ K   + T  GH N 
Sbjct: 202  -SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNE 258

Query: 849  VSCAVFH---PRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
              C   +      + I+S S+D  + +W++  +  VQ  +   D     A HPT N++A+
Sbjct: 259  KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318



 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR----MCTLIDKFDEHDG 251
           +TG  L      S  V  + F+     I++S ++G+ ++WD      + TLID   + + 
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID---DDNP 215

Query: 252 PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP---WIL 422
           PV  + F       ++   D  +K+W+Y   +CL T  GH +     F +       WI+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL--DQTVRVW 581
           S S+D  + +WN Q++  V  L GH   V+    HP+E+++ SA+L  D+T+++W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330



 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 58/212 (27%), Positives = 90/212 (42%)
 Frame = +3

Query: 330 NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYV 509
           NY L+   FTL GH   + +  F     W+ S+S D+ I++W          ++GH   +
Sbjct: 34  NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90

Query: 510 MCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVK 689
               +    +L+VSAS D+T+++WD+S                                 
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVS----------------------------SGKCL 122

Query: 690 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 869
             L+GH   V    F+P   LIVSG+ D  V+IW +   K   + T   H + VS   F+
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFN 180

Query: 870 PRQELILSYSDDKSIRVWDMSKQTGVQTFRRD 965
               LI+S S D   R+WD +    ++T   D
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212



 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 53/186 (28%), Positives = 85/186 (45%)
 Frame = +3

Query: 486  LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLF 665
            L GH   V   +F P+ + + S+S D+ +++W                            
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---------------------------- 72

Query: 666  GTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYN 845
            G  D   +  + GH  G++  A+     L+VS +DD+ +KIW ++  K   + T +GH N
Sbjct: 73   GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSN 130

Query: 846  NVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAARH 1025
             V C  F+P+  LI+S S D+S+R+WD+     ++T     D   V A H  FN      
Sbjct: 131  YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVH--FN-----R 181

Query: 1026 DGGMIV 1043
            DG +IV
Sbjct: 182  DGSLIV 187



 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
 Frame = +3

Query: 87  TGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 266
           +G  L   +  S  V   +F+P+   I++   +  +++WD +    +     H  PV  +
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177

Query: 267 DFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTF--FHHEYPWILSASDDQ 440
            F++   L VS   D   ++W+    +CL TL+   D    +F  F     +IL+A+ D 
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDN 236

Query: 441 TIRVWNWQSRTCVCVLTGHNH--YVMCAQFH-PSEDLVVSASLDQTVRVWDISGLRKKNL 611
           T+++W++    C+   TGH +  Y + A F       +VS S D  V +W++        
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ------- 289

Query: 612 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGA--DDRQVK 785
                              T + V K  L+GH   V   A HPT  +I S A  +D+ +K
Sbjct: 290 -------------------TKEIVQK--LQGHTDVVISTACHPTENIIASAALENDKTIK 328

Query: 786 IWR 794
           +W+
Sbjct: 329 LWK 331



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 30/112 (26%), Positives = 57/112 (50%)
 Frame = +3

Query: 684  VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV 863
            +K  L GH + V+   F P    + S + D+ +KIW   + K  +  T  GH   +S   
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVA 94

Query: 864  FHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            +     L++S SDDK++++WD+S    ++T +   ++ +    +P  NL+ +
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146


>ref|NP_060058.1| WD repeat-containing protein 5 [Homo sapiens].
          Length = 334

 Score =  106 bits (265), Expect = 3e-23
 Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 3/300 (1%)
 Frame = +3

Query: 129  VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 308
            V  + F P   W+ +S  + +I++W             H   +  + +     L VS  D
Sbjct: 48   VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107

Query: 309  DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 488
            D  +K+W+    +CL TL GH +Y+    F+ +   I+S S D+++R+W+ ++  C+  L
Sbjct: 108  DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167

Query: 489  TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFG 668
              H+  V    F+    L+VS+S D   R+WD +                          
Sbjct: 168  PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-------------------------- 201

Query: 669  TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNN 848
             +   +K +++  +  V++  F P    I++   D  +K+W  ++ K   + T  GH N 
Sbjct: 202  -SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNE 258

Query: 849  VSCAVFH---PRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
              C   +      + I+S S+D  + +W++  +  VQ  +   D     A HPT N++A+
Sbjct: 259  KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318



 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR----MCTLIDKFDEHDG 251
           +TG  L      S  V  + F+     I++S ++G+ ++WD      + TLID   + + 
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID---DDNP 215

Query: 252 PVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP---WIL 422
           PV  + F       ++   D  +K+W+Y   +CL T  GH +     F +       WI+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275

Query: 423 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASL--DQTVRVW 581
           S S+D  + +WN Q++  V  L GH   V+    HP+E+++ SA+L  D+T+++W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330



 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 58/212 (27%), Positives = 90/212 (42%)
 Frame = +3

Query: 330 NYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYV 509
           NY L+   FTL GH   + +  F     W+ S+S D+ I++W          ++GH   +
Sbjct: 34  NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90

Query: 510 MCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVK 689
               +    +L+VSAS D+T+++WD+S                                 
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVS----------------------------SGKCL 122

Query: 690 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 869
             L+GH   V    F+P   LIVSG+ D  V+IW +   K   + T   H + VS   F+
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFN 180

Query: 870 PRQELILSYSDDKSIRVWDMSKQTGVQTFRRD 965
               LI+S S D   R+WD +    ++T   D
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212



 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 53/186 (28%), Positives = 85/186 (45%)
 Frame = +3

Query: 486  LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDLF 665
            L GH   V   +F P+ + + S+S D+ +++W                            
Sbjct: 41   LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW---------------------------- 72

Query: 666  GTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYN 845
            G  D   +  + GH  G++  A+     L+VS +DD+ +KIW ++  K   + T +GH N
Sbjct: 73   GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSN 130

Query: 846  NVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAARH 1025
             V C  F+P+  LI+S S D+S+R+WD+     ++T     D   V A H  FN      
Sbjct: 131  YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVH--FN-----R 181

Query: 1026 DGGMIV 1043
            DG +IV
Sbjct: 182  DGSLIV 187



 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
 Frame = +3

Query: 87  TGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGI 266
           +G  L   +  S  V   +F+P+   I++   +  +++WD +    +     H  PV  +
Sbjct: 118 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAV 177

Query: 267 DFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTF--FHHEYPWILSASDDQ 440
            F++   L VS   D   ++W+    +CL TL+   D    +F  F     +IL+A+ D 
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDN 236

Query: 441 TIRVWNWQSRTCVCVLTGHNH--YVMCAQFH-PSEDLVVSASLDQTVRVWDISGLRKKNL 611
           T+++W++    C+   TGH +  Y + A F       +VS S D  V +W++        
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ------- 289

Query: 612 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGA--DDRQVK 785
                              T + V K  L+GH   V   A HPT  +I S A  +D+ +K
Sbjct: 290 -------------------TKEIVQK--LQGHTDVVISTACHPTENIIASAALENDKTIK 328

Query: 786 IWR 794
           +W+
Sbjct: 329 LWK 331



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 30/112 (26%), Positives = 57/112 (50%)
 Frame = +3

Query: 684  VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAV 863
            +K  L GH + V+   F P    + S + D+ +KIW   + K  +  T  GH   +S   
Sbjct: 37   LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVA 94

Query: 864  FHPRQELILSYSDDKSIRVWDMSKQTGVQTFRRDHDHFWVLAAHPTFNLLAA 1019
            +     L++S SDDK++++WD+S    ++T +   ++ +    +P  NL+ +
Sbjct: 95   WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146


>ref|NP_001038941.1| WD repeat-containing protein 38 [Homo sapiens].
          Length = 314

 Score =  103 bits (258), Expect = 2e-22
 Identities = 71/300 (23%), Positives = 125/300 (41%), Gaps = 2/300 (0%)
 Frame = +3

Query: 66  INSSEPETGGM--LTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFD 239
           +NS  P T  +  +  F      V   +F P    +LT   +G +  W+ R   L+ +  
Sbjct: 1   MNSGVPATLAVRRVKFFGQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLG 60

Query: 240 EHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWI 419
            H GPV+   F     LF S   D  +++W+    +CL  L GH   + T  F  +   +
Sbjct: 61  GHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQL 120

Query: 420 LSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR 599
            S   D+ + +W+ QS   + +L GH   +  + F P+ + + + S D TV +WD+  + 
Sbjct: 121 ASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMV- 179

Query: 600 KKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQ 779
                                   T AV    LEGH   ++   +  +  L+ SG+ D+ 
Sbjct: 180 ------------------------TPAVSHQALEGHSANISCLCYSAS-GLLASGSWDKT 214

Query: 780 VKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSYSDDKSIRVWDMSKQTGVQTFR 959
           + IW+   S    +   +GH   V    F P +  + S    + ++VWD +    ++T +
Sbjct: 215 IHIWKPTTSSL--LIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLK 272



 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 2/166 (1%)
 Frame = +3

Query: 84  ETGGMLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRG 263
           ++G ML         ++   F P    + T   +  + +WD RM T        +G    
Sbjct: 135 QSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSAN 194

Query: 264 IDF--HKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDD 437
           I    +    L  SG  D  I +W       L  L GH+ ++++  F  +  W+ SA   
Sbjct: 195 ISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYS 254

Query: 438 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 575
           + ++VW+  +  C+  L G         F P   ++VS + DQT R
Sbjct: 255 RMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILVSGAADQTRR 300


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,070,395
Number of extensions: 1167084
Number of successful extensions: 5677
Number of sequences better than 1.0e-05: 143
Number of HSP's gapped: 4301
Number of HSP's successfully gapped: 375
Length of query: 352
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 248
Effective length of database: 14,868,908
Effective search space: 3687489184
Effective search space used: 3687489184
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-009777
         (1058 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr04                                                         250   1e-63

>Sscrofa_Chr04 
||          Length = 143465943

 Score =  250 bits (126), Expect = 1e-63
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                            
Query: 11       agagggacgctgacgtggaggcagccgtaaggcggcagggagtgtcagggctcggattaa 70
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98033407 agagggacgctgacgtggaggcagccgtaaggcggcagggagtgtcagggctcggattaa 98033466

                                                                            
Query: 71       cagctcggagccagagaccggagggatgctaaccaaattcgagaccaagagcgcgcgagt 130
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98033467 cagctcggagccagagaccggagggatgctaaccaaattcgagaccaagagcgcgcgagt 98033526

                      
Query: 131      caaagg 136
                ||||||
Sbjct: 98033527 caaagg 98033532



 Score =  246 bits (124), Expect = 2e-62
 Identities = 133/136 (97%)
 Strand = Plus / Plus

                                                                            
Query: 801      gaatcaaaggcatgggaggttgatacctgccggggccattacaacaacgtatcttgtgct 860
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98053845 gaatcaaaggcatgggaggttgatacctgccggggccattacaacaacgtatcttgtgct 98053904

                                                                            
Query: 861      gtcttccaccctcggcaagagttgatccttagctattctgatgacaagagtatccgagtc 920
                |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 98053905 gtcttccaccctcgccaagagttgatccttagcaattctgaggacaagagtatccgagtc 98053964

                                
Query: 921      tgggatatgtctaagc 936
                ||||||||||||||||
Sbjct: 98053965 tgggatatgtctaagc 98053980



 Score =  234 bits (118), Expect = 8e-59
 Identities = 118/118 (100%)
 Strand = Plus / Plus

                                                                            
Query: 134      agggctcagttttcaccccaaaagaccctggatcctgacaagtttacacaatggggttat 193
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98036537 agggctcagttttcaccccaaaagaccctggatcctgacaagtttacacaatggggttat 98036596

                                                                          
Query: 194      ccagttatgggattatcggatgtgtaccctcattgacaagtttgatgaacatgatggt 251
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98036597 ccagttatgggattatcggatgtgtaccctcattgacaagtttgatgaacatgatggt 98036654



 Score =  224 bits (113), Expect = 8e-56
 Identities = 113/113 (100%)
 Strand = Plus / Plus

                                                                            
Query: 481      gtgtgttaacggggcacaaccattatgtaatgtgtgctcagtttcacccctcagaagacc 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98044695 gtgtgttaacggggcacaaccattatgtaatgtgtgctcagtttcacccctcagaagacc 98044754

                                                                     
Query: 541      tggttgtgtcagctagcctggaccagactgtgcgcgtttgggatatttctggt 593
                |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98044755 tggttgtgtcagctagcctggaccagactgtgcgcgtttgggatatttctggt 98044807



 Score =  202 bits (102), Expect = 3e-49
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                            
Query: 700      agggtcatgatcgtggagttaactgggctgccttccaccctactatgccccttattgtat 759
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98053163 agggtcatgatcgtggagttaactgggctgccttccaccctactatgccccttattgtat 98053222

                                                          
Query: 760      ctggggcagatgaccgtcaagtgaagatctggcgcatgaatg 801
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98053223 ctggggcagatgaccgtcaagtgaagatctggcgcatgaatg 98053264



 Score =  188 bits (95), Expect = 4e-45
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                            
Query: 608      cttgtcccctggtgcagtggagtcggatgtgagaggaataactggggttgatctgtttgg 667
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98051676 cttgtcccctggtgcagtggagtcggatgtgagaggaataactggggttgatctgtttgg 98051735

                                                   
Query: 668      aactacggatgcagtggtgaaacatgtcctggagg 702
                |||||||||||||||||||||||||||||||||||
Sbjct: 98051736 aactacggatgcagtggtgaaacatgtcctggagg 98051770



 Score =  167 bits (84), Expect = 2e-38
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                            
Query: 322      aggtttggaactataagcttcggcgctgtctcttcacattgcttggacatttagactaca 381
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98042141 aggtttggaactataagcttcggcgctgtctcttcacattgcttggacatttagactaca 98042200

                                        
Query: 382      ttcgcactacattttttcatcatg 405
                ||||||||||||||||||||||||
Sbjct: 98042201 ttcgcactacattttttcatcatg 98042224



 Score =  153 bits (77), Expect = 2e-34
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                            
Query: 249      ggtccggtacgaggcattgacttccataagcagcagccactgtttgtctctggaggagat 308
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98036840 ggtccggtacgaggcattgacttccataagcagcagccactgtttgtctctggaggagat 98036899

                                 
Query: 309      gactataagattaaggt 325
                |||||||||||||||||
Sbjct: 98036900 gactataagattaaggt 98036916



 Score =  153 bits (77), Expect = 2e-34
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                            
Query: 405      gaatatccttggatcttgagtgcctcagatgatcagaccatccgagtgtggaactggcag 464
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98043658 gaatatccttggatcttgagtgcctcagatgatcagaccatccgagtgtggaactggcag 98043717

                                 
Query: 465      tctagaacctgtgtctg 481
                |||||||||||||||||
Sbjct: 98043718 tctagaacctgtgtctg 98043734



 Score =  123 bits (62), Expect = 2e-25
 Identities = 77/82 (93%)
 Strand = Plus / Plus

                                                                            
Query: 938      gactggtgttcaaaccttccgcagggaccatgatcatttctgggttctagctgcccaccc 997
                |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 98055531 gactggtgttcagaccttccgcagggaccatgatcgtttctgggttctagctgcccaccc 98055590

                                      
Query: 998      tacctttaacctcttggcagca 1019
                || | |||||||||| ||||||
Sbjct: 98055591 taaccttaacctctttgcagca 98055612


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,829,731
Number of extensions: 97
Number of successful extensions: 97
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 97
Number of HSP's successfully gapped: 10
Length of query: 1058
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1037
Effective length of database: 2,808,413,156
Effective search space: 2912324442772
Effective search space used: 2912324442772
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)