Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-010064
(975 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002687097.1| PREDICTED: polypeptide N-acetylgalactosaminy... 531 e-151
Alignment gi|XP_870404.2| PREDICTED: polypeptide N-acetylgalactosaminyltr... 384 e-107
Alignment gi|NP_001069909.1| polypeptide N-acetylgalactosaminyltransferas... 196 2e-50
Alignment gi|NP_001094597.1| putative polypeptide N-acetylgalactosaminylt... 171 9e-43
Alignment gi|NP_803485.1| polypeptide N-acetylgalactosaminyltransferase 1... 169 3e-42
Alignment gi|NP_001178227.1| polypeptide N-acetylgalactosaminyltransferas... 169 4e-42
Alignment gi|XP_002689374.1| PREDICTED: polypeptide N-acetylgalactosaminy... 167 2e-41
Alignment gi|XP_001788574.1| PREDICTED: polypeptide N-acetylgalactosaminy... 167 2e-41
Alignment gi|NP_001070354.1| polypeptide N-acetylgalactosaminyltransferas... 164 8e-41
Alignment gi|NP_001179661.1| polypeptide N-acetylgalactosaminyltransferas... 159 5e-39
>ref|XP_002687097.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 11-like
[Bos taurus].
Length = 605
Score = 531 bits (1367), Expect = e-151
Identities = 260/299 (86%), Positives = 270/299 (90%)
Frame = +3
Query: 78 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 257
MGSVTVRYFCYGCLFTSA WT+LLF+YFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT
Sbjct: 1 MGSVTVRYFCYGCLFTSAAWTLLLFIYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 60
Query: 258 RGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFN 437
RGP LES+FK+N IDD+IDNHVEDPE+ N KFS ELGMIFNERDQELRDLGYQKHAFN
Sbjct: 61 RGPS--LESQFKANKIDDMIDNHVEDPERGNVKFSSELGMIFNERDQELRDLGYQKHAFN 118
Query: 438 MLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPA 617
MLISNRLGYHRDVPDTRNAACKDKSY DLPVAS++ICFYNEALSALLRTVHSVLDRTPA
Sbjct: 119 MLISNRLGYHRDVPDTRNAACKDKSYPADLPVASIVICFYNEALSALLRTVHSVLDRTPA 178
Query: 618 RLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV 797
RLLHEII EYIQKYL GKIKVIRN KREGLIRGRMIGAAHATGEV
Sbjct: 179 RLLHEIILVDDDSDFDDLKGELDEYIQKYLPGKIKVIRNPKREGLIRGRMIGAAHATGEV 238
Query: 798 LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGLH 974
LVFLDSHCEVNVLWLQPLLAAIREDR TVVCPVIDIISADTLAYS+SPVVRGGF+WGLH
Sbjct: 239 LVFLDSHCEVNVLWLQPLLAAIREDRRTVVCPVIDIISADTLAYSSSPVVRGGFNWGLH 297
>ref|XP_870404.2| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 11-like
isoform 3 [Bos taurus].
Length = 529
Score = 384 bits (987), Expect = e-107
Identities = 191/221 (86%), Positives = 197/221 (89%)
Frame = +3
Query: 312 VIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRN 491
+IDNHVEDPE+ N KFS ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRN
Sbjct: 1 MIDNHVEDPERGNVKFSSELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRN 60
Query: 492 AACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXX 671
AACKDKSY DLPVAS++ICFYNEALSALLRTVHSVLDRTPARLLHEII
Sbjct: 61 AACKDKSYPADLPVASIVICFYNEALSALLRTVHSVLDRTPARLLHEIILVDDDSDFDDL 120
Query: 672 XXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPL 851
EYIQKYL GKIKVIRN KREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPL
Sbjct: 121 KGELDEYIQKYLPGKIKVIRNPKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPL 180
Query: 852 LAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGLH 974
LAAIREDR TVVCPVIDIISADTLAYS+SPVVRGGF+WGLH
Sbjct: 181 LAAIREDRRTVVCPVIDIISADTLAYSSSPVVRGGFNWGLH 221
>ref|NP_001069909.1| polypeptide N-acetylgalactosaminyltransferase-like 5 [Bos taurus].
Length = 448
Score = 196 bits (499), Expect = 2e-50
Identities = 112/239 (46%), Positives = 145/239 (60%), Gaps = 4/239 (1%)
Frame = +3
Query: 267 GHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPEL----GMIFNERDQELRDLGYQKHAF 434
G L+SK S ++ + VE +D P+L G FN E+ GY + F
Sbjct: 50 GEKLQSKPDSVHLPRAYNVRVERASEDEPA-EPKLLLSSGENFNYSIPEVIH-GYSTYGF 107
Query: 435 NMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTP 614
N +IS LG++R+VPDTRN C+ K Y LP AS+IICF+NE +AL RT+ S++ T
Sbjct: 108 NSIISKNLGHYRNVPDTRNVMCQKKMYPAKLPTASIIICFHNEEFNALFRTLSSIMTLTQ 167
Query: 615 ARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGE 794
+L EII +Y + GKIK+IRN KREGLIR RM GA+HA+G+
Sbjct: 168 QYILEEIILVDDMSDFDDLKEKL-DYHLEIFRGKIKLIRNKKREGLIRARMTGASHASGD 226
Query: 795 VLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGL 971
VLVFLDSHCEVN +WL+PLL AI +D VVCP+ID+I TL Y SP+VRG F+W L
Sbjct: 227 VLVFLDSHCEVNKVWLEPLLNAIAKDPKMVVCPLIDVIDYMTLEYQPSPIVRGAFNWRL 285
>ref|NP_001094597.1| putative polypeptide N-acetylgalactosaminyltransferase-like protein
1 [Bos taurus].
Length = 557
Score = 171 bits (433), Expect = 9e-43
Identities = 94/187 (50%), Positives = 116/187 (62%), Gaps = 1/187 (0%)
Frame = +3
Query: 417 YQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHS 596
Y++HAFN L S++L R + DTR+ +C SY +DLP SVII F+NEA S LLRTV S
Sbjct: 86 YRQHAFNQLESDKLSPDRPIRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKS 145
Query: 597 VLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGA 776
VL+RTPA L+ EII K+K +RN +REGLIR R+ GA
Sbjct: 146 VLNRTPASLIQEIILVDDFSSDPEDCLLLTRI------PKVKCLRNDRREGLIRSRVRGA 199
Query: 777 AHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAY-SASPVVRG 953
A VL FLDSHCEVN WLQP+L ++ED VV P+ID+IS D AY +AS +RG
Sbjct: 200 DVAAAAVLTFLDSHCEVNTEWLQPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRG 259
Query: 954 GFHWGLH 974
GF W LH
Sbjct: 260 GFDWSLH 266
>ref|NP_803485.1| polypeptide N-acetylgalactosaminyltransferase 1 [Bos taurus].
Length = 559
Score = 169 bits (428), Expect = 3e-42
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 65 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 124
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P +L EI+ Y++K L + VIR
Sbjct: 125 HNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 183
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE V WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 184 EQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKTVVCPIIDVISD 243
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 244 DTFEYMAGSDMTYGGFNWKLN 264
>ref|NP_001178227.1| polypeptide N-acetylgalactosaminyltransferase-like 6 [Bos taurus].
Length = 601
Score = 169 bits (427), Expect = 4e-42
Identities = 86/205 (41%), Positives = 125/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G + +++ D Y+++ FN+ +SN + R +PD R+A CK K Y LP S+I
Sbjct: 86 EHGKPYPLTEEDHDDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSII 145
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE ++LLRT+HS+++RTP L+ EII EY+ ++ K+++
Sbjct: 146 IPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDDFSDREHLKEKLEEYMARF--SKVRI 203
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR R++GA+ A GEVL FLDSHCEVNV WL PLL I + T+VCP+ID+
Sbjct: 204 VRTKKREGLIRTRLLGASMARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDV 263
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I + Y A +RG F W ++
Sbjct: 264 IDHNHFGYEAQAGDAMRGAFDWEMY 288
>ref|XP_002689374.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 10-like
[Bos taurus].
Length = 620
Score = 167 bits (422), Expect = 2e-41
Identities = 88/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G F E D Y+++ FN+ +S+++ +R +PD R+ CK K Y LP S+I
Sbjct: 108 EQGKPFPLTYAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCKSKRYLETLPNTSII 167
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE S+LLRTVHSVL+R+P L+ EI+ +Y+ L +++
Sbjct: 168 IPFHNEGWSSLLRTVHSVLNRSPPELIAEIVLVDDFSDREHLKKPLEDYMA--LFPSVRI 225
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR RM+GA+ ATG+V+ FLDSHCE NV WL PLL I +R T+VCP+ID+
Sbjct: 226 LRTKKREGLIRTRMLGASAATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDV 285
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I D Y A +RG F W ++
Sbjct: 286 IDHDDFRYETQAGDAMRGAFDWEMY 310
>ref|XP_001788574.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 10 [Bos
taurus].
Length = 652
Score = 167 bits (422), Expect = 2e-41
Identities = 88/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G F E D Y+++ FN+ +S+++ +R +PD R+ CK K Y LP S+I
Sbjct: 140 EQGKPFPLTYAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCKSKRYLETLPNTSII 199
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE S+LLRTVHSVL+R+P L+ EI+ +Y+ L +++
Sbjct: 200 IPFHNEGWSSLLRTVHSVLNRSPPELIAEIVLVDDFSDREHLKKPLEDYMA--LFPSVRI 257
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR RM+GA+ ATG+V+ FLDSHCE NV WL PLL I +R T+VCP+ID+
Sbjct: 258 LRTKKREGLIRTRMLGASAATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDV 317
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I D Y A +RG F W ++
Sbjct: 318 IDHDDFRYETQAGDAMRGAFDWEMY 342
>ref|NP_001070354.1| polypeptide N-acetylgalactosaminyltransferase 13 [Bos taurus].
Length = 556
Score = 164 bits (416), Expect = 8e-41
Identities = 88/195 (45%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Frame = +3
Query: 393 DQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALS 572
DQE ++ + FN++ S+ + +R +PD R CK + Y +LP SV+I F+NEA S
Sbjct: 70 DQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTRVYPDELPNTSVVIVFHNEAWS 129
Query: 573 ALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGL 752
LLRTV+SV++R+P LL E+I Y+ K L +K+IR +R GL
Sbjct: 130 TLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYV-KNLEVPVKIIRMEERSGL 188
Query: 753 IRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYS 932
IR R+ GAA + G+V+ FLD+HCE + WL+PLLA I+EDR TVVCP+ID+IS DT Y
Sbjct: 189 IRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYM 248
Query: 933 A-SPVVRGGFHWGLH 974
A S + GGF+W L+
Sbjct: 249 AGSDMTYGGFNWKLN 263
>ref|NP_001179661.1| polypeptide N-acetylgalactosaminyltransferase 14 [Bos taurus].
Length = 552
Score = 159 bits (401), Expect = 5e-39
Identities = 91/198 (45%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Frame = +3
Query: 384 NERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNE 563
N + + D Y+ +AFN S R+ +R VPDTR C Y DLP S+II F+NE
Sbjct: 63 NAKKWRVGDDPYKLYAFNQRESERIASNRVVPDTRLFRCTLLVYCADLPPTSIIIAFHNE 122
Query: 564 ALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKR 743
A S LLRT+ S+L+RTP L+ EII Q K+K +RN +R
Sbjct: 123 ARSTLLRTIRSILNRTPMNLIQEIILVDDFSNDPEDCK------QLIKLPKVKCLRNNER 176
Query: 744 EGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTL 923
+GL+R R+ GA A G L FLDSHCEVN WLQPLL ++ED VVCPVIDII DT
Sbjct: 177 QGLVRSRIRGADIAQGTTLTFLDSHCEVNRDWLQPLLHRVKEDYTRVVCPVIDIIHLDTF 236
Query: 924 AY-SASPVVRGGFHWGLH 974
Y ++ +RGGF W LH
Sbjct: 237 NYIESASELRGGFDWSLH 254
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 34,118,971
Number of extensions: 864602
Number of successful extensions: 2646
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 2601
Number of HSP's successfully gapped: 30
Length of query: 325
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 223
Effective length of database: 14,306,398
Effective search space: 3190326754
Effective search space used: 3190326754
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-010064
(975 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_539924.2| PREDICTED: similar to Polypeptide N-acetylgalac... 529 e-150
Alignment gi|XP_853759.1| PREDICTED: similar to UDP-N-acetyl-alpha-D-gala... 197 2e-50
Alignment gi|XP_537492.2| PREDICTED: similar to Putative polypeptide N-ac... 172 4e-43
Alignment gi|XP_866757.1| PREDICTED: similar to polypeptide N-acetylgalac... 169 4e-42
Alignment gi|XP_866741.1| PREDICTED: similar to polypeptide N-acetylgalac... 169 4e-42
Alignment gi|XP_866727.1| PREDICTED: similar to polypeptide N-acetylgalac... 169 4e-42
Alignment gi|XP_866713.1| PREDICTED: similar to polypeptide N-acetylgalac... 169 4e-42
Alignment gi|XP_866687.1| PREDICTED: similar to polypeptide N-acetylgalac... 169 4e-42
Alignment gi|XP_537284.2| PREDICTED: similar to polypeptide N-acetylgalac... 169 4e-42
Alignment gi|XP_546283.2| PREDICTED: similar to GalNAc transferase 10 iso... 168 6e-42
>ref|XP_539924.2| PREDICTED: similar to Polypeptide N-acetylgalactosaminyltransferase
11 (Protein-UDP acetylgalactosaminyltransferase 11)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 11) (Polypeptide
GalNAc transferase 11) (GalNAc-T11) (pp-GaNTase 11)...
[Canis familiaris].
Length = 608
Score = 529 bits (1363), Expect = e-150
Identities = 257/299 (85%), Positives = 269/299 (89%)
Frame = +3
Query: 78 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 257
MGSVTVRYFCYGCLFTSATWTVLLF+YFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT
Sbjct: 1 MGSVTVRYFCYGCLFTSATWTVLLFIYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 60
Query: 258 RGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFN 437
RGP VLES+FK N IDD IDNHVEDPEK N KFS ELGMIFNERDQELRDLGYQKHAFN
Sbjct: 61 RGPSRVLESQFKVNRIDDKIDNHVEDPEKGNIKFSSELGMIFNERDQELRDLGYQKHAFN 120
Query: 438 MLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPA 617
MLISNRLGYHRDVPDTRNAAC+DKS+ DLP ASV+ICFYNEALSALLRTVHSVLDRTPA
Sbjct: 121 MLISNRLGYHRDVPDTRNAACRDKSFPADLPAASVVICFYNEALSALLRTVHSVLDRTPA 180
Query: 618 RLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV 797
+LLHEII EY+QKYL GKIKVIRN KREGLIRGRMIGAAHATGEV
Sbjct: 181 QLLHEIILVDDDSDFDDLKGELEEYVQKYLPGKIKVIRNIKREGLIRGRMIGAAHATGEV 240
Query: 798 LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGLH 974
LVFLDSHCEVNV+WLQPLLAAI+ED+ TVVCPVIDIISADTLAYS+SPVVRGGF+WGLH
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAAIQEDQQTVVCPVIDIISADTLAYSSSPVVRGGFNWGLH 299
>ref|XP_853759.1| PREDICTED: similar to
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase-like 5 [Canis
familiaris].
Length = 380
Score = 197 bits (500), Expect = 2e-50
Identities = 109/216 (50%), Positives = 136/216 (62%), Gaps = 2/216 (0%)
Frame = +3
Query: 330 EDPEKDNA--KFSPELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACK 503
E P++D K +LG FN + E D G K+ FN ++S LG VPDTRN C
Sbjct: 4 EKPDEDETAGKLFFKLGKDFNYSNPEFID-GLLKYGFNTILSKSLGSDSKVPDTRNKMCL 62
Query: 504 DKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXX 683
K Y LP ASVIICF+NE +AL RT+ SV + TP +L EII
Sbjct: 63 QKRYPAKLPTASVIICFHNEEFNALFRTLSSVGNLTPHYILEEIILVDDMSDFDDLKEKL 122
Query: 684 XEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAI 863
+++ + GKIKVIRN KREGL+R R+IGA+ A+G+VLVFLDSHCEVN WLQPLL AI
Sbjct: 123 DHHLEIF-RGKIKVIRNKKREGLVRSRLIGASRASGDVLVFLDSHCEVNTAWLQPLLHAI 181
Query: 864 REDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGL 971
+D VVCP+ID+I + TL Y +SPVVRG F+W L
Sbjct: 182 AKDSKMVVCPLIDVIDSMTLEYQSSPVVRGAFNWHL 217
>ref|XP_537492.2| PREDICTED: similar to Putative polypeptide
N-acetylgalactosaminyltransferase-like protein 1
(Protein-UDP acetylgalactosaminyltransferase-like
protein 1) (UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase-like protein 1)
(Polypeptide GalNAc transferase-... [Canis familiaris].
Length = 642
Score = 172 bits (436), Expect = 4e-43
Identities = 95/187 (50%), Positives = 116/187 (62%), Gaps = 1/187 (0%)
Frame = +3
Query: 417 YQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHS 596
Y++HAFN L S++L R + DTR+ +C SY DLP SVII F+NEA S LLRTV S
Sbjct: 171 YRQHAFNQLESDKLSPDRAIRDTRHYSCPSVSYSADLPATSVIITFHNEARSTLLRTVKS 230
Query: 597 VLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGA 776
VL+RTPA L+ EII K+K +RN +REGLIR R+ GA
Sbjct: 231 VLNRTPASLIQEIILVDDFSSDPEDCLLLTRI------PKVKCLRNDRREGLIRSRVRGA 284
Query: 777 AHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAY-SASPVVRG 953
AT VL FLDSHCEVN WLQP+L ++ED VV P+ID+IS D AY +AS +RG
Sbjct: 285 DVATAAVLTFLDSHCEVNTEWLQPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRG 344
Query: 954 GFHWGLH 974
GF W LH
Sbjct: 345 GFDWSLH 351
>ref|XP_866757.1| PREDICTED: similar to polypeptide N-acetylgalactosaminyltransferase
1 isoform 7 [Canis familiaris].
Length = 559
Score = 169 bits (428), Expect = 4e-42
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 65 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 124
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P +L EI+ Y++K L + VIR
Sbjct: 125 HNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 183
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE V WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 184 EQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKTVVCPIIDVISD 243
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 244 DTFEYMAGSDMTYGGFNWKLN 264
>ref|XP_866741.1| PREDICTED: similar to polypeptide N-acetylgalactosaminyltransferase
1 isoform 6 [Canis familiaris].
Length = 561
Score = 169 bits (428), Expect = 4e-42
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 67 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 126
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P +L EI+ Y++K L + VIR
Sbjct: 127 HNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 185
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE V WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 186 EQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKTVVCPIIDVISD 245
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 246 DTFEYMAGSDMTYGGFNWKLN 266
>ref|XP_866727.1| PREDICTED: similar to polypeptide N-acetylgalactosaminyltransferase
1 isoform 5 [Canis familiaris].
Length = 562
Score = 169 bits (428), Expect = 4e-42
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 65 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 124
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P +L EI+ Y++K L + VIR
Sbjct: 125 HNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 183
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE V WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 184 EQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKTVVCPIIDVISD 243
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 244 DTFEYMAGSDMTYGGFNWKLN 264
>ref|XP_866713.1| PREDICTED: similar to polypeptide N-acetylgalactosaminyltransferase
1 isoform 4 [Canis familiaris].
Length = 558
Score = 169 bits (428), Expect = 4e-42
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 65 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 124
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P +L EI+ Y++K L + VIR
Sbjct: 125 HNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 183
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE V WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 184 EQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKTVVCPIIDVISD 243
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 244 DTFEYMAGSDMTYGGFNWKLN 264
>ref|XP_866687.1| PREDICTED: similar to polypeptide N-acetylgalactosaminyltransferase
1 isoform 2 [Canis familiaris].
Length = 541
Score = 169 bits (428), Expect = 4e-42
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 96 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 155
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P +L EI+ Y++K L + VIR
Sbjct: 156 HNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 214
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE V WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 215 EQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKTVVCPIIDVISD 274
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 275 DTFEYMAGSDMTYGGFNWKLN 295
>ref|XP_537284.2| PREDICTED: similar to polypeptide N-acetylgalactosaminyltransferase
1 isoform 1 [Canis familiaris].
Length = 559
Score = 169 bits (428), Expect = 4e-42
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 65 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 124
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P +L EI+ Y++K L + VIR
Sbjct: 125 HNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 183
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE V WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 184 EQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKTVVCPIIDVISD 243
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 244 DTFEYMAGSDMTYGGFNWKLN 264
>ref|XP_546283.2| PREDICTED: similar to GalNAc transferase 10 isoform a [Canis
familiaris].
Length = 878
Score = 168 bits (426), Expect = 6e-42
Identities = 87/205 (42%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G + D E D Y+++ FN+ +S+++ +R +PD R+ C K Y LP S+I
Sbjct: 366 EQGRPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSII 425
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE S+LLRTVHSVL+R+P+ L+ EI+ +Y+ L +++
Sbjct: 426 IPFHNEGWSSLLRTVHSVLNRSPSELIAEIVLVDDFSDREHLKKPLEDYMA--LFPSVRI 483
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR RM+GA+ ATG+V+ FLDSHCE NV WL PLL I +R T+VCP+ID+
Sbjct: 484 LRTKKREGLIRTRMLGASAATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDV 543
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I D Y A +RG F W ++
Sbjct: 544 IDHDDFRYETQAGDAMRGAFDWEMY 568
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 35,565,813
Number of extensions: 886868
Number of successful extensions: 2444
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 2402
Number of HSP's successfully gapped: 32
Length of query: 325
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 222
Effective length of database: 15,440,896
Effective search space: 3427878912
Effective search space used: 3427878912
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-010064
(975 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003134591.1| PREDICTED: polypeptide N-acetylgalactosaminy... 575 e-164
Alignment gi|XP_003134592.1| PREDICTED: putative polypeptide N-acetylgala... 216 2e-56
Alignment gi|XP_003128684.2| PREDICTED: putative polypeptide N-acetylgala... 171 7e-43
Alignment gi|XP_003134177.2| PREDICTED: polypeptide N-acetylgalactosaminy... 167 1e-41
Alignment gi|XP_003361024.1| PREDICTED: polypeptide N-acetylgalactosaminy... 159 2e-39
Alignment gi|XP_003360781.1| PREDICTED: polypeptide N-acetylgalactosaminy... 157 6e-39
Alignment gi|XP_001927809.2| PREDICTED: polypeptide N-acetylgalactosaminy... 154 5e-38
Alignment gi|XP_003122084.1| PREDICTED: polypeptide N-acetylgalactosaminy... 149 2e-36
Alignment gi|XP_003133460.2| PREDICTED: polypeptide N-acetylgalactosaminy... 148 5e-36
Alignment gi|XP_001927211.2| PREDICTED: polypeptide N-acetylgalactosaminy... 147 1e-35
>ref|XP_003134591.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 11 [Sus
scrofa].
Length = 608
Score = 575 bits (1482), Expect = e-164
Identities = 282/299 (94%), Positives = 283/299 (94%)
Frame = +3
Query: 78 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 257
MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT
Sbjct: 1 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 60
Query: 258 RGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFN 437
RGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFN
Sbjct: 61 RGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFN 120
Query: 438 MLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPA 617
MLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPA
Sbjct: 121 MLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPA 180
Query: 618 RLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV 797
RLLHEII EYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV
Sbjct: 181 RLLHEIILVDDDSDFDDLKGELDEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV 240
Query: 798 LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGLH 974
LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGF+WGLH
Sbjct: 241 LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFNWGLH 299
>ref|XP_003134592.1| PREDICTED: putative polypeptide
N-acetylgalactosaminyltransferase-like protein 5-like
[Sus scrofa].
Length = 446
Score = 216 bits (549), Expect = 2e-56
Identities = 124/298 (41%), Positives = 168/298 (56%)
Frame = +3
Query: 78 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 257
M +V ++ YG L T WT L +YF+ + V K + KG+ +K +
Sbjct: 1 MRNVIIQSLLYGSL-TLGVWTALFGIYFHHNNVKNQEKKIQTKGNPLIWSLGEKLQEQSI 59
Query: 258 RGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFN 437
G + + + N + E + K LG FN D EL GY K+ FN
Sbjct: 60 HGSMQIRRPRERLN-----------EDETEEQKPISVLGEDFNYTDTELI-YGYMKYGFN 107
Query: 438 MLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPA 617
++S LG +R+VPD+RN C K Y +LP AS+IICF+NE +ALLRTV S++ TP
Sbjct: 108 HIVSKSLGNYRNVPDSRNKMCHQKHYPANLPTASIIICFHNEEFNALLRTVSSIMTLTPH 167
Query: 618 RLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV 797
++ EII +Y + GKIKVIRN KREGLIR R++GA+ A+G++
Sbjct: 168 HIIEEIILVDDMSEYDDLKEKL-DYHLEIFRGKIKVIRNKKREGLIRARLVGASRASGDI 226
Query: 798 LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGL 971
LVFLDSHCEVN +WL+PLL AI +D VVCP++D+I TL Y SPVVRG F+W L
Sbjct: 227 LVFLDSHCEVNKIWLEPLLDAIVKDPKMVVCPIMDVIDYVTLEYKPSPVVRGVFNWHL 284
>ref|XP_003128684.2| PREDICTED: putative polypeptide
N-acetylgalactosaminyltransferase-like protein 1-like
[Sus scrofa].
Length = 557
Score = 171 bits (432), Expect = 7e-43
Identities = 94/187 (50%), Positives = 116/187 (62%), Gaps = 1/187 (0%)
Frame = +3
Query: 417 YQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHS 596
Y++HAFN L S++L R + DTR+ +C SY +DLP SVII F+NEA S LLRTV S
Sbjct: 86 YRQHAFNQLESDKLSPDRPIRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKS 145
Query: 597 VLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGA 776
VL+RTPA L+ EII K+K +RN +REGLIR R+ GA
Sbjct: 146 VLNRTPASLIQEIILVDDFSSDPEDCLLLTRI------PKVKCLRNDRREGLIRSRVRGA 199
Query: 777 AHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAY-SASPVVRG 953
A VL FLDSHCEVN WLQP+L ++ED VV P+ID+IS D AY +AS +RG
Sbjct: 200 DVAAAGVLTFLDSHCEVNTEWLQPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRG 259
Query: 954 GFHWGLH 974
GF W LH
Sbjct: 260 GFDWSLH 266
>ref|XP_003134177.2| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 10 [Sus
scrofa].
Length = 569
Score = 167 bits (422), Expect = 1e-41
Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G + D E D Y+++ FN+ +S+++ +R +PD R+ C K Y LP S+I
Sbjct: 57 EQGKPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLEMLPNTSII 116
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE S+LLRTVHSVL+R+P L+ EI+ +Y+ L +++
Sbjct: 117 IPFHNEGWSSLLRTVHSVLNRSPPELIAEIVLVDDFSDREHLKKPLEDYMA--LFPNVRI 174
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR RM+GA+ ATG+V+ FLDSHCE NV WL PLL I +R T+VCP+ID+
Sbjct: 175 LRTKKREGLIRTRMLGASAATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDV 234
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I D Y A +RG F W ++
Sbjct: 235 IDHDDFRYETQAGDAMRGAFDWEMY 259
>ref|XP_003361024.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 14-like
[Sus scrofa].
Length = 401
Score = 159 bits (402), Expect = 2e-39
Identities = 93/198 (46%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Frame = +3
Query: 384 NERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNE 563
N + + D Y+ +AFN S R+ +R VPDTR C Y DLP S+II F+NE
Sbjct: 107 NAKKWRVGDDPYKLYAFNQRESERVASNRVVPDTRLFRCTLLVYCADLPPTSIIITFHNE 166
Query: 564 ALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKR 743
A S LLRTV S+L+RTP L+ EII Q K+K +RN +R
Sbjct: 167 ARSTLLRTVRSILNRTPMNLIQEIILVDDFSNDPEDCK------QLIKLPKVKCLRNNER 220
Query: 744 EGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTL 923
+GL+R R+ GA A G L FLDSHCEVN WLQPLL ++ED VVCPVIDII DT
Sbjct: 221 QGLVRSRIRGADAAQGTTLTFLDSHCEVNRDWLQPLLHRVKEDYTRVVCPVIDIIHLDTF 280
Query: 924 AYSASPV-VRGGFHWGLH 974
Y S +RGGF W LH
Sbjct: 281 DYIESATELRGGFDWSLH 298
>ref|XP_003360781.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 4-like
[Sus scrofa].
Length = 578
Score = 157 bits (398), Expect = 6e-39
Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Frame = +3
Query: 384 NERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYR-TDLPVASVIICFYN 560
NE + + ++ +++A N+ +S+R+ HR + D R CK K + LP SV+I FYN
Sbjct: 86 NEGELKQQEELIERYAINIYLSDRISLHRHIEDKRMYECKSKKFDYRRLPTTSVVIAFYN 145
Query: 561 EALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTK 740
EA S LLRT+HSVL+ +PA LL EII YI ++++IR K
Sbjct: 146 EAWSTLLRTIHSVLETSPAVLLKEIILVDDLSDRVYLKTQLETYISNL--DRVRLIRTNK 203
Query: 741 REGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADT 920
REGL+R R+IGA ATG+VL FLD HCE N WL+PLL I ED +VCPVID I +T
Sbjct: 204 REGLVRARLIGATFATGDVLTFLDCHCECNTGWLEPLLERIAEDETAIVCPVIDTIDWNT 263
Query: 921 LAY---SASPVVRGGFHWGL 971
+ + P++ GGF W L
Sbjct: 264 FEFYMQTGEPMI-GGFDWRL 282
>ref|XP_001927809.2| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 2 [Sus
scrofa].
Length = 526
Score = 154 bits (390), Expect = 5e-38
Identities = 85/186 (45%), Positives = 113/186 (60%), Gaps = 1/186 (0%)
Frame = +3
Query: 417 YQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHS 596
Y ++ FN + S++L R VPDTR+ C+ K +R DLP SV+I F+NEA SALLRTV S
Sbjct: 54 YARNKFNQVESDKLRMDRAVPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVS 113
Query: 597 VLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGA 776
VL ++P L+ EII + K++V+RN +REGL+R R+ GA
Sbjct: 114 VLKKSPPHLIKEIILVDDYSNDPEDGALLGKI------EKVRVLRNDRREGLMRSRVRGA 167
Query: 777 AHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAY-SASPVVRG 953
A +VL FLDSHCE N WL+PLL + EDR VV P+ID+I+ D Y AS ++G
Sbjct: 168 DAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKG 227
Query: 954 GFHWGL 971
GF W L
Sbjct: 228 GFDWNL 233
>ref|XP_003122084.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 12 [Sus
scrofa].
Length = 541
Score = 149 bits (376), Expect = 2e-36
Identities = 85/194 (43%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Frame = +3
Query: 402 LRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTD-LPVASVIICFYNEALSAL 578
L++ + H N+ +S+R+ HR +P+ N CK+K Y D LP SV+I FYNEA S L
Sbjct: 91 LQEESLRLHQINIYLSDRISLHRRLPERWNPLCKEKKYDYDHLPTTSVVIAFYNEAWSTL 150
Query: 579 LRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIR 758
LRTV+SVL+ +P LL E+I + K K+++IR KREGL+R
Sbjct: 151 LRTVYSVLETSPDILLEEVILVDDYSDREHLKERLAIELAKL--PKVRLIRANKREGLVR 208
Query: 759 GRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAY--- 929
R++GA+ A G+VL FLD HCE + WL+PLL I E VVCPVID+I +T Y
Sbjct: 209 ARLLGASVAKGDVLTFLDCHCECHEGWLEPLLQRIHEKESAVVCPVIDVIDWNTFEYMGN 268
Query: 930 SASPVVRGGFHWGL 971
S P + GGF W L
Sbjct: 269 SREPQI-GGFDWRL 281
>ref|XP_003133460.2| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 13-like
[Sus scrofa].
Length = 331
Score = 148 bits (373), Expect = 5e-36
Identities = 79/160 (49%), Positives = 104/160 (65%), Gaps = 1/160 (0%)
Frame = +3
Query: 498 CKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXX 677
CK K Y +LP SV+I F+NEA S LLRTV+SV++R+P LL E+I
Sbjct: 101 CKTKVYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKL 160
Query: 678 XXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLA 857
Y+ K L +K+IR +R GLIR R+ GAA + G+V+ FLD+HCE + WL+PLLA
Sbjct: 161 TLENYV-KNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLA 219
Query: 858 AIREDRHTVVCPVIDIISADTLAYSA-SPVVRGGFHWGLH 974
I+EDR TVVCP+ID+IS DT Y A S + GGF+W L+
Sbjct: 220 RIKEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLN 259
Score = 68.6 bits (166), Expect = 5e-12
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +3
Query: 699 KYLTGKIKVIRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDR 875
K L +K+IR +R GLIR R+ GAA + G+V+ FLD+HCE + WL+PLLA I+EDR
Sbjct: 42 KNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDR 100
>ref|XP_001927211.2| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 9 [Sus
scrofa].
Length = 427
Score = 147 bits (370), Expect = 1e-35
Identities = 73/193 (37%), Positives = 108/193 (55%)
Frame = +3
Query: 393 DQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALS 572
D + + Y+++ +N +S+R+ R +PD R C+ +Y DLP SV+ F NEALS
Sbjct: 107 DSQETESKYEEYGYNAQLSDRISLDRTIPDYRPKKCRQMTYSDDLPQISVVFIFVNEALS 166
Query: 573 ALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGL 752
+LR+VHSV++ TP++LL E+I +Y+ K G +K++RN +REGL
Sbjct: 167 VILRSVHSVVNHTPSQLLKEVILVDDNSDNVELKLNLDQYVSKRYPGLVKIVRNGRREGL 226
Query: 753 IRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYS 932
IR R+ G AT V+ F D+H E + W +P L+ IRED +V P ID I DT
Sbjct: 227 IRARLQGWKAATAPVVGFFDAHVEFSTGWAEPALSRIREDHRRIVLPAIDNIKYDTFEVQ 286
Query: 933 ASPVVRGGFHWGL 971
G++WGL
Sbjct: 287 QYASAAHGYNWGL 299
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 21,938,754
Number of extensions: 552909
Number of successful extensions: 1664
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 1636
Number of HSP's successfully gapped: 22
Length of query: 325
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 226
Effective length of database: 8,879,129
Effective search space: 2006683154
Effective search space used: 2006683154
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-010064
(975 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_659157.1| polypeptide N-acetylgalactosaminyltransferase 1... 506 e-143
Alignment gi|NP_080725.2| putative polypeptide N-acetylgalactosaminyltran... 195 5e-50
Alignment gi|NP_001074890.1| putative polypeptide N-acetylgalactosaminylt... 172 4e-43
Alignment gi|NP_778197.2| polypeptide N-acetylgalactosaminyltransferase-l... 167 9e-42
Alignment gi|NP_001153876.1| polypeptide N-acetylgalactosaminyltransferas... 167 1e-41
Alignment gi|NP_038842.3| polypeptide N-acetylgalactosaminyltransferase 1... 167 1e-41
Alignment gi|NP_598950.2| polypeptide N-acetylgalactosaminyltransferase 1... 166 2e-41
Alignment gi|NP_082140.2| polypeptide N-acetylgalactosaminyltransferase 1... 166 3e-41
Alignment gi|NP_766618.2| polypeptide N-acetylgalactosaminyltransferase 1... 166 3e-41
Alignment gi|NP_056552.1| polypeptide N-acetylgalactosaminyltransferase 4... 156 2e-38
>ref|NP_659157.1| polypeptide N-acetylgalactosaminyltransferase 11 [Mus musculus].
Length = 608
Score = 506 bits (1303), Expect = e-143
Identities = 242/299 (80%), Positives = 263/299 (87%)
Frame = +3
Query: 78 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 257
MGS+TVRYFCYGCLFTSATWTVLLF+YFNFSEVTQPL+NVPIKGSGPHGPFPKKFYPRFT
Sbjct: 1 MGSITVRYFCYGCLFTSATWTVLLFIYFNFSEVTQPLRNVPIKGSGPHGPFPKKFYPRFT 60
Query: 258 RGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFN 437
RGPG VL+ +FK+N ID +++NH+EDP+K +K S ELGMIFNERDQELRDLGYQKHAFN
Sbjct: 61 RGPGRVLDPQFKANRIDRLMNNHIEDPDKGLSKSSSELGMIFNERDQELRDLGYQKHAFN 120
Query: 438 MLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPA 617
MLISNRLGYHRDVPDTRNA C+ KSY TDLP AS++ICFYNEA SALLRTVHSV+DRTPA
Sbjct: 121 MLISNRLGYHRDVPDTRNAECRRKSYPTDLPTASIVICFYNEAFSALLRTVHSVVDRTPA 180
Query: 618 RLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV 797
LLHEII EYIQ+YL K+KVIRN KREGLIRGRMIGAAHATGEV
Sbjct: 181 HLLHEIILVDDSSDFDDLKGELDEYIQRYLPAKVKVIRNMKREGLIRGRMIGAAHATGEV 240
Query: 798 LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGLH 974
LVFLDSHCEVNV+WLQPLLA I ED HTVVCPVIDIISADTLAYS+SPVVRGGF+WGLH
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAIILEDPHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLH 299
>ref|NP_080725.2| putative polypeptide N-acetylgalactosaminyltransferase-like protein
5 [Mus musculus].
Length = 431
Score = 195 bits (495), Expect = 5e-50
Identities = 103/217 (47%), Positives = 137/217 (63%)
Frame = +3
Query: 324 HVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACK 503
H ED D FS D EL G +++ N ++S RLG R+VPD+R+ C+
Sbjct: 58 HSEDVTHDEVNFS----------DPELIQ-GLRRYGLNAIMSRRLGIEREVPDSRDKICQ 106
Query: 504 DKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXX 683
K Y +LP AS+IICFYNE + LLR V SV++ +P LL EII
Sbjct: 107 QKHYPFNLPTASIIICFYNEEFNTLLRAVSSVVNLSPQHLLEEIILVDDMSEFDDLKDKL 166
Query: 684 XEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAI 863
Y++ + GK+K+IRN KREGLIR +MIGA+ A+G++LVFLDSHCEVN +WL+PLL AI
Sbjct: 167 DYYLEIF-RGKVKLIRNKKREGLIRSKMIGASRASGDILVFLDSHCEVNRVWLEPLLHAI 225
Query: 864 REDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGLH 974
+D VVCP+ID+I+ TL Y A+P+VRG F W L+
Sbjct: 226 AKDHKMVVCPIIDVINELTLDYMAAPIVRGAFDWNLN 262
>ref|NP_001074890.1| putative polypeptide N-acetylgalactosaminyltransferase-like protein
1 [Mus musculus].
Length = 558
Score = 172 bits (436), Expect = 4e-43
Identities = 96/187 (51%), Positives = 116/187 (62%), Gaps = 1/187 (0%)
Frame = +3
Query: 417 YQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHS 596
Y++HAFN L S++L R + DTR+ +C SY +DLP SVII F+NEA S LLRTV S
Sbjct: 86 YRQHAFNQLESDKLSSDRPIRDTRHYSCPSLSYSSDLPATSVIITFHNEARSTLLRTVKS 145
Query: 597 VLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGA 776
VL+RTPA L+ EII K+K +RN KREGLIR R+ GA
Sbjct: 146 VLNRTPASLIQEIILVDDFSSDPEDCLLLTRI------PKVKCLRNDKREGLIRSRVRGA 199
Query: 777 AHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAY-SASPVVRG 953
A VL FLDSHCEVNV WLQP+L + ED VV P+ID+IS D AY +AS +RG
Sbjct: 200 DVAGATVLTFLDSHCEVNVEWLQPMLQRVMEDHTRVVSPIIDVISLDNFAYLAASADLRG 259
Query: 954 GFHWGLH 974
GF W LH
Sbjct: 260 GFDWSLH 266
>ref|NP_778197.2| polypeptide N-acetylgalactosaminyltransferase-like 6 [Mus
musculus].
Length = 601
Score = 167 bits (424), Expect = 9e-42
Identities = 85/205 (41%), Positives = 125/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G + +++ D Y+++ FN+ +SN + R +PD R+A CK K Y LP S+I
Sbjct: 86 EHGKPYPLTEEDRDDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSII 145
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE ++LLRT+HS+++RTP L+ EII +Y+ ++ K+++
Sbjct: 146 IPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDDFSDREHLKDKLEDYMARF--SKVRI 203
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR R++GA+ A GEVL FLDSHCEVNV WL PLL I + T+VCP+ID+
Sbjct: 204 VRTKKREGLIRTRLLGASVARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDV 263
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I + Y A +RG F W ++
Sbjct: 264 IDHNHFGYEAQAGDAMRGAFDWEMY 288
>ref|NP_001153876.1| polypeptide N-acetylgalactosaminyltransferase 1 [Mus musculus].
Length = 559
Score = 167 bits (423), Expect = 1e-41
Identities = 87/201 (43%), Positives = 123/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 65 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 124
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P ++ EI+ Y++K L + VIR
Sbjct: 125 HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 183
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 184 EQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISD 243
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 244 DTFEYMAGSDMTYGGFNWKLN 264
>ref|NP_038842.3| polypeptide N-acetylgalactosaminyltransferase 1 [Mus musculus].
Length = 559
Score = 167 bits (423), Expect = 1e-41
Identities = 87/201 (43%), Positives = 123/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 65 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 124
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P ++ EI+ Y++K L + VIR
Sbjct: 125 HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 183
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 184 EQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISD 243
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 244 DTFEYMAGSDMTYGGFNWKLN 264
>ref|NP_598950.2| polypeptide N-acetylgalactosaminyltransferase 10 [Mus musculus].
Length = 603
Score = 166 bits (421), Expect = 2e-41
Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G + D E D Y+++ FN+ +S+++ +R +PD R+ C K Y LP S+I
Sbjct: 91 EQGKPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKLYLETLPNTSII 150
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE S+LLRTVHSVL+R+P L+ EI+ +Y+ L +++
Sbjct: 151 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA--LFPSVRI 208
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR RM+GA+ ATG+V+ FLDSHCE NV WL PLL I +R T+VCP+ID+
Sbjct: 209 LRTKKREGLIRTRMLGASAATGDVVTFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDV 268
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I D Y A +RG F W ++
Sbjct: 269 IDHDDFRYETQAGDAMRGAFDWEMY 293
>ref|NP_082140.2| polypeptide N-acetylgalactosaminyltransferase 14 [Mus musculus].
Length = 550
Score = 166 bits (419), Expect = 3e-41
Identities = 94/198 (47%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Frame = +3
Query: 384 NERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNE 563
N + + D Y+ +AFN S R+ +R VPDTR+ C Y TDLP S+II F+NE
Sbjct: 63 NAKKWRVGDDPYKLYAFNQRESERISSNRAVPDTRHKRCSLLVYCTDLPPTSIIITFHNE 122
Query: 564 ALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKR 743
A S LLRT+ SVL+RTP L+ EII Q K+K +RN +R
Sbjct: 123 ARSTLLRTIRSVLNRTPMHLIQEIILVDDFSNDPEDCK------QLIKLPKVKCLRNNER 176
Query: 744 EGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTL 923
+GL+R RM GA A G L FLDSHCEVN WLQPLL ++ED VVCPVIDII+ DT
Sbjct: 177 QGLVRSRMRGADIAQGTTLTFLDSHCEVNRDWLQPLLHRVKEDYTRVVCPVIDIINLDTF 236
Query: 924 AY-SASPVVRGGFHWGLH 974
Y ++ +RGGF W LH
Sbjct: 237 NYIESASELRGGFDWSLH 254
>ref|NP_766618.2| polypeptide N-acetylgalactosaminyltransferase 13 [Mus musculus].
Length = 556
Score = 166 bits (419), Expect = 3e-41
Identities = 89/195 (45%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Frame = +3
Query: 393 DQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALS 572
DQE ++ + FN++ S+ + +R +PD R CK K Y +LP SV+I F+NEA S
Sbjct: 70 DQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELPNTSVVIVFHNEAWS 129
Query: 573 ALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGL 752
LLRTV+SV++R+P LL E+I Y+ K L +K+IR +R GL
Sbjct: 130 TLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYV-KTLEVPVKIIRMEERSGL 188
Query: 753 IRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYS 932
IR R+ GAA + G+V+ FLD+HCE + WL+PLLA I+EDR TVVCP+ID+IS DT Y
Sbjct: 189 IRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYM 248
Query: 933 A-SPVVRGGFHWGLH 974
A S + GGF+W L+
Sbjct: 249 AGSDMTYGGFNWKLN 263
>ref|NP_056552.1| polypeptide N-acetylgalactosaminyltransferase 4 [Mus musculus].
Length = 578
Score = 156 bits (395), Expect = 2e-38
Identities = 87/200 (43%), Positives = 117/200 (58%), Gaps = 4/200 (2%)
Frame = +3
Query: 384 NERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYR-TDLPVASVIICFYN 560
NE + + ++ +++A N+ +S+R+ HR + D R CK K + LP SVII FYN
Sbjct: 86 NEGELKQQEELIERYAINIYLSDRISLHRHIEDKRMYECKAKKFHYRSLPTTSVIIAFYN 145
Query: 561 EALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTK 740
EA S LLRT+HSVL+ +PA LL EII YI ++++IR K
Sbjct: 146 EAWSTLLRTIHSVLETSPAVLLKEIILVDDLSDRIYLKAQLETYISNL--ERVRLIRTNK 203
Query: 741 REGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADT 920
REGL+R R+IGA ATG+VL FLD HCE N WL+PLL I D +VCPVID I +T
Sbjct: 204 REGLVRARLIGATFATGDVLTFLDCHCECNTGWLEPLLERISRDETAIVCPVIDTIDWNT 263
Query: 921 LAY---SASPVVRGGFHWGL 971
+ + P++ GGF W L
Sbjct: 264 FEFYMQTGEPMI-GGFDWRL 282
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 29,769,813
Number of extensions: 745119
Number of successful extensions: 2226
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 2190
Number of HSP's successfully gapped: 23
Length of query: 325
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 223
Effective length of database: 12,553,887
Effective search space: 2799516801
Effective search space used: 2799516801
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-010064
(975 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_071370.2| polypeptide N-acetylgalactosaminyltransferase 1... 521 e-148
Alignment gi|NP_660335.2| putative polypeptide N-acetylgalactosaminyltran... 205 6e-53
Alignment gi|NP_001030017.2| polypeptide N-acetylgalactosaminyltransferas... 169 4e-42
Alignment gi|NP_001161840.1| putative polypeptide N-acetylgalactosaminylt... 169 4e-42
Alignment gi|NP_065743.2| putative polypeptide N-acetylgalactosaminyltran... 169 4e-42
Alignment gi|NP_065207.2| polypeptide N-acetylgalactosaminyltransferase 1... 169 5e-42
Alignment gi|NP_938080.1| polypeptide N-acetylgalactosaminyltransferase 1... 167 2e-41
Alignment gi|NP_443149.2| polypeptide N-acetylgalactosaminyltransferase 1... 166 4e-41
Alignment gi|NP_078848.2| polypeptide N-acetylgalactosaminyltransferase 1... 164 9e-41
Alignment gi|NP_001186710.1| POC1B-GALNT4 protein isoform 1 [Homo sapiens]. 155 5e-38
>ref|NP_071370.2| polypeptide N-acetylgalactosaminyltransferase 11 [Homo sapiens].
Length = 608
Score = 521 bits (1343), Expect = e-148
Identities = 253/299 (84%), Positives = 267/299 (89%)
Frame = +3
Query: 78 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPIKGSGPHGPFPKKFYPRFT 257
MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVP+KGSGPHGP PKKFYPRFT
Sbjct: 1 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVTQPLKNVPVKGSGPHGPSPKKFYPRFT 60
Query: 258 RGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHAFN 437
RGP VLE +FK+N IDDVID+ VEDPE+ + KFS ELGMIFNERDQELRDLGYQKHAFN
Sbjct: 61 RGPSRVLEPQFKANKIDDVIDSRVEDPEEGHLKFSSELGMIFNERDQELRDLGYQKHAFN 120
Query: 438 MLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRTPA 617
MLIS+RLGYHRDVPDTRNAACK+K Y DLP ASV+ICFYNEA SALLRTVHSV+DRTPA
Sbjct: 121 MLISDRLGYHRDVPDTRNAACKEKFYPPDLPAASVVICFYNEAFSALLRTVHSVIDRTPA 180
Query: 618 RLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV 797
LLHEII EY+QKYL GKIKVIRNTKREGLIRGRMIGAAHATGEV
Sbjct: 181 HLLHEIILVDDDSDFDDLKGELDEYVQKYLPGKIKVIRNTKREGLIRGRMIGAAHATGEV 240
Query: 798 LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGLH 974
LVFLDSHCEVNV+WLQPLLAAIREDRHTVVCPVIDIISADTLAYS+SPVVRGGF+WGLH
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAAIREDRHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLH 299
>ref|NP_660335.2| putative polypeptide N-acetylgalactosaminyltransferase-like protein
5 [Homo sapiens].
Length = 443
Score = 205 bits (521), Expect = 6e-53
Identities = 123/300 (41%), Positives = 163/300 (54%), Gaps = 2/300 (0%)
Frame = +3
Query: 78 MGSVTVRYFCYGCLFTSATWTVLLFVYFNFSEVT--QPLKNVPIKGSGPHGPFPKKFYPR 251
M + ++ YG L T WT LLF+Y + + V+ Q P+ P KK + +
Sbjct: 1 MRNAIIQGLFYGSL-TFGIWTALLFIYLHHNHVSSWQKKSQEPLSAWSPG----KKVHQQ 55
Query: 252 FTRGPGHVLESKFKSNNIDDVIDNHVEDPEKDNAKFSPELGMIFNERDQELRDLGYQKHA 431
G + + HV D K LG FN + EL K+
Sbjct: 56 IIYGS-------------EQIPKPHVIVKRTDEDKAKSMLGTDFNHTNPELHK-ELLKYG 101
Query: 432 FNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHSVLDRT 611
FN++IS LG R+VPDTR+ C K Y LP AS++ICFYNE +AL +T+ SV + T
Sbjct: 102 FNVIISRSLGIEREVPDTRSKMCLQKHYPARLPTASIVICFYNEECNALFQTMSSVTNLT 161
Query: 612 PARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATG 791
P L EII +++ + GK+K+IRN KREGLIR R+IGA+HA+G
Sbjct: 162 PHYFLEEIILVDDMSKVDDLKEKLDYHLETF-RGKVKIIRNKKREGLIRARLIGASHASG 220
Query: 792 EVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFHWGL 971
+VLVFLDSHCEVN +WL+PLL AI +D VVCP+ID+I TL Y SP+VRG F W L
Sbjct: 221 DVLVFLDSHCEVNRVWLEPLLHAIAKDPKMVVCPLIDVIDDRTLEYKPSPLVRGTFDWNL 280
>ref|NP_001030017.2| polypeptide N-acetylgalactosaminyltransferase-like 6 [Homo
sapiens].
Length = 601
Score = 169 bits (428), Expect = 4e-42
Identities = 86/205 (41%), Positives = 125/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G + +++ D Y+++ FN+ +SN + R +PD R+A CK K Y LP S+I
Sbjct: 86 EHGKPYPLTEEDHDDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSII 145
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE ++LLRT+HS+++RTP L+ EII EY+ ++ K+++
Sbjct: 146 IPFHNEGWTSLLRTIHSIINRTPGSLIAEIILVDDFSEREHLKDKLEEYMARF--SKVRI 203
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR R++GA+ A GEVL FLDSHCEVNV WL PLL I + T+VCP+ID+
Sbjct: 204 VRTKKREGLIRTRLLGASMARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPMIDV 263
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I + Y A +RG F W ++
Sbjct: 264 IDHNHFGYEAQAGDAMRGAFDWEMY 288
>ref|NP_001161840.1| putative polypeptide N-acetylgalactosaminyltransferase-like protein
1 [Homo sapiens].
Length = 558
Score = 169 bits (428), Expect = 4e-42
Identities = 93/187 (49%), Positives = 115/187 (61%), Gaps = 1/187 (0%)
Frame = +3
Query: 417 YQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHS 596
Y++HAFN L S++L R + DTR+ +C SY +DLP SVII F+NEA S LLRTV S
Sbjct: 86 YRQHAFNQLESDKLSPDRPIRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKS 145
Query: 597 VLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGA 776
VL+RTPA L+ EII K+K +RN +REGLIR R+ GA
Sbjct: 146 VLNRTPANLIQEIILVDDFSSDPEDCLLLTRI------PKVKCLRNDRREGLIRSRVRGA 199
Query: 777 AHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAY-SASPVVRG 953
A VL FLDSHCEVN WL P+L ++ED VV P+ID+IS D AY +AS +RG
Sbjct: 200 DVAAATVLTFLDSHCEVNTEWLPPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRG 259
Query: 954 GFHWGLH 974
GF W LH
Sbjct: 260 GFDWSLH 266
>ref|NP_065743.2| putative polypeptide N-acetylgalactosaminyltransferase-like protein
1 [Homo sapiens].
Length = 558
Score = 169 bits (428), Expect = 4e-42
Identities = 93/187 (49%), Positives = 115/187 (61%), Gaps = 1/187 (0%)
Frame = +3
Query: 417 YQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALSALLRTVHS 596
Y++HAFN L S++L R + DTR+ +C SY +DLP SVII F+NEA S LLRTV S
Sbjct: 86 YRQHAFNQLESDKLSPDRPIRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKS 145
Query: 597 VLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGLIRGRMIGA 776
VL+RTPA L+ EII K+K +RN +REGLIR R+ GA
Sbjct: 146 VLNRTPANLIQEIILVDDFSSDPEDCLLLTRI------PKVKCLRNDRREGLIRSRVRGA 199
Query: 777 AHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAY-SASPVVRG 953
A VL FLDSHCEVN WL P+L ++ED VV P+ID+IS D AY +AS +RG
Sbjct: 200 DVAAATVLTFLDSHCEVNTEWLPPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRG 259
Query: 954 GFHWGLH 974
GF W LH
Sbjct: 260 GFDWSLH 266
>ref|NP_065207.2| polypeptide N-acetylgalactosaminyltransferase 1 [Homo sapiens].
Length = 559
Score = 169 bits (427), Expect = 5e-42
Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 375 MIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICF 554
++ + DQE ++ + FN++ S + +R +PD R CK K Y +LP SV+I F
Sbjct: 65 VVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVF 124
Query: 555 YNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRN 734
+NEA S LLRTVHSV++R+P ++ EI+ Y++K L + VIR
Sbjct: 125 HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKK-LKVPVHVIRM 183
Query: 735 TKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISA 914
+R GLIR R+ GAA + G+V+ FLD+HCE V WL+PLLA I+ DR TVVCP+ID+IS
Sbjct: 184 EQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRRTVVCPIIDVISD 243
Query: 915 DTLAYSA-SPVVRGGFHWGLH 974
DT Y A S + GGF+W L+
Sbjct: 244 DTFEYMAGSDMTYGGFNWKLN 264
>ref|NP_938080.1| polypeptide N-acetylgalactosaminyltransferase 10 [Homo sapiens].
Length = 603
Score = 167 bits (422), Expect = 2e-41
Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 366 ELGMIFNERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVI 545
E G + D E D Y+++ FN+ +S+++ +R +PD R+ C K Y LP S+I
Sbjct: 91 EQGRPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSII 150
Query: 546 ICFYNEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKV 725
I F+NE S+LLRTVHSVL+R+P L+ EI+ +Y+ L +++
Sbjct: 151 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA--LFPSVRI 208
Query: 726 IRNTKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDI 905
+R KREGLIR RM+GA+ ATG+V+ FLDSHCE NV WL PLL I +R T+VCP+ID+
Sbjct: 209 LRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDV 268
Query: 906 ISADTLAY--SASPVVRGGFHWGLH 974
I D Y A +RG F W ++
Sbjct: 269 IDHDDFRYETQAGDAMRGAFDWEMY 293
>ref|NP_443149.2| polypeptide N-acetylgalactosaminyltransferase 13 [Homo sapiens].
Length = 556
Score = 166 bits (419), Expect = 4e-41
Identities = 89/195 (45%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Frame = +3
Query: 393 DQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNEALS 572
DQE ++ + FN++ S+ + +R +PD R CK K Y +LP SV+I F+NEA S
Sbjct: 70 DQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELPNTSVVIVFHNEAWS 129
Query: 573 ALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKREGL 752
LLRTV+SV++R+P LL E+I Y+ K L +K+IR +R GL
Sbjct: 130 TLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYV-KNLEVPVKIIRMEERSGL 188
Query: 753 IRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYS 932
IR R+ GAA + G+V+ FLD+HCE + WL+PLLA I+EDR TVVCP+ID+IS DT Y
Sbjct: 189 IRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYM 248
Query: 933 A-SPVVRGGFHWGLH 974
A S + GGF+W L+
Sbjct: 249 AGSDMTYGGFNWKLN 263
>ref|NP_078848.2| polypeptide N-acetylgalactosaminyltransferase 14 [Homo sapiens].
Length = 552
Score = 164 bits (416), Expect = 9e-41
Identities = 92/198 (46%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
Frame = +3
Query: 384 NERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDKSYRTDLPVASVIICFYNE 563
N + + D Y+ +AFN S R+ +R +PDTR+ C Y TDLP S+II F+NE
Sbjct: 63 NAKKWRVGDDPYKLYAFNQRESERISSNRAIPDTRHLRCTLLVYCTDLPPTSIIITFHNE 122
Query: 564 ALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNTKR 743
A S LLRT+ SVL+RTP L+ EII Q K+K +RN +R
Sbjct: 123 ARSTLLRTIRSVLNRTPTHLIREIILVDDFSNDPDDCK------QLIKLPKVKCLRNNER 176
Query: 744 EGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTL 923
+GL+R R+ GA A G L FLDSHCEVN WLQPLL ++ED VVCPVIDII+ DT
Sbjct: 177 QGLVRSRIRGADIAQGTTLTFLDSHCEVNRDWLQPLLHRVKEDYTRVVCPVIDIINLDTF 236
Query: 924 AY-SASPVVRGGFHWGLH 974
Y ++ +RGGF W LH
Sbjct: 237 TYIESASELRGGFDWSLH 254
>ref|NP_001186710.1| POC1B-GALNT4 protein isoform 1 [Homo sapiens].
Length = 575
Score = 155 bits (392), Expect = 5e-38
Identities = 90/201 (44%), Positives = 119/201 (59%), Gaps = 5/201 (2%)
Frame = +3
Query: 384 NERDQELRDLGYQKHAFNMLISNRLGYHRDVPDTRNAACKDK--SYRTDLPVASVIICFY 557
NE + + ++ +++A N+ +S+R+ HR + D R CK + +YRT LP SVII FY
Sbjct: 83 NEDELKQQEELIERYAINIYLSDRISLHRHIEDKRMYECKSQKFNYRT-LPTTSVIIAFY 141
Query: 558 NEALSALLRTVHSVLDRTPARLLHEIIXXXXXXXXXXXXXXXXEYIQKYLTGKIKVIRNT 737
NEA S LLRT+HSVL+ +PA LL EII YI ++++IR
Sbjct: 142 NEAWSTLLRTIHSVLETSPAVLLKEIILVDDLSDRVYLKTQLETYISNL--DRVRLIRTN 199
Query: 738 KREGLIRGRMIGAAHATGEVLVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISAD 917
KREGL+R R+IGA ATG+VL FLD HCE N WL+PLL I D VVCPVID I +
Sbjct: 200 KREGLVRARLIGATFATGDVLTFLDCHCECNSGWLEPLLERIGRDETAVVCPVIDTIDWN 259
Query: 918 TLAY---SASPVVRGGFHWGL 971
T + P++ GGF W L
Sbjct: 260 TFEFYMQIGEPMI-GGFDWRL 279
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 34,959,351
Number of extensions: 876225
Number of successful extensions: 2473
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 2438
Number of HSP's successfully gapped: 22
Length of query: 325
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 222
Effective length of database: 14,901,872
Effective search space: 3308215584
Effective search space used: 3308215584
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-010064
(975 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr18 670 0.0
Sscrofa_Chr11 70 2e-09
>Sscrofa_Chr18
|| Length = 61220071
Score = 670 bits (338), Expect = 0.0
Identities = 338/338 (100%)
Strand = Plus / Minus
Query: 38 aggaaattgaaaatggcccttcagctatgctaggtctataatgggaagtgtcacagttcg 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634520 aggaaattgaaaatggcccttcagctatgctaggtctataatgggaagtgtcacagttcg 5634461
Query: 98 atatttctgttatggatgcctttttacatctgcaacctggacggttttgctttttgttta 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634460 atatttctgttatggatgcctttttacatctgcaacctggacggttttgctttttgttta 5634401
Query: 158 tttcaacttcagtgaagtgactcagccacttaagaatgtgcccatcaaggggtctgggcc 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634400 tttcaacttcagtgaagtgactcagccacttaagaatgtgcccatcaaggggtctgggcc 5634341
Query: 218 gcatggaccattccccaaaaaattttatccccgtttcactcgaggtccaggccacgtact 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634340 gcatggaccattccccaaaaaattttatccccgtttcactcgaggtccaggccacgtact 5634281
Query: 278 agaatcgaaattcaaatcaaacaatattgatgatgtgatagataatcatgttgaagatcc 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634280 agaatcgaaattcaaatcaaacaatattgatgatgtgatagataatcatgttgaagatcc 5634221
Query: 338 agaaaaagacaatgcgaaattctctcctgaattgggta 375
||||||||||||||||||||||||||||||||||||||
Sbjct: 5634220 agaaaaagacaatgcgaaattctctcctgaattgggta 5634183
Score = 331 bits (167), Expect = 4e-88
Identities = 167/167 (100%)
Strand = Plus / Minus
Query: 497 atgtaaagacaagtcttaccggacggatctgccagtcgctagtgttattatttgtttcta 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5628060 atgtaaagacaagtcttaccggacggatctgccagtcgctagtgttattatttgtttcta 5628001
Query: 557 caatgaagccttgtctgccctgctccggacagtacacagtgtcctagaccgcacgccagc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5628000 caatgaagccttgtctgccctgctccggacagtacacagtgtcctagaccgcacgccagc 5627941
Query: 617 ccggcttcttcacgaaattatcctcgtggatgatgacagtgactttg 663
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5627940 ccggcttcttcacgaaattatcctcgtggatgatgacagtgactttg 5627894
Score = 325 bits (164), Expect = 3e-86
Identities = 181/189 (95%)
Strand = Plus / Minus
Query: 787 caggtgaggtcctggtgttcctggacagccactgtgaggtgaacgtgctgtggctgcagc 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5622587 caggtgaggtcctggtgttcctggacagccactgtgaggtgaacgtgctgtggctgcagc 5622528
Query: 847 ccctgctggccgccatccgggaggaccggcacacggtggtgtgcccggtgatcgacatca 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5622527 ccctgctggccgccatccgggaggaccggcacacggtggtgtgcccggtgatcgacatca 5622468
Query: 907 tcagcgccgacacgctcgcctacagcgcctcccccgtggtgcnnnnnnncttccactggg 966
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 5622467 tcagcgccgacacgctcgcctacagcgcctcccccgtggtgcgggggggcttcaactggg 5622408
Query: 967 ggctgcact 975
|||||||||
Sbjct: 5622407 ggctgcact 5622399
Score = 256 bits (129), Expect = 2e-65
Identities = 129/129 (100%)
Strand = Plus / Minus
Query: 663 gatgatttgaagggagaactagatgaatacatccaaaaatacctcactggaaaaatcaaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5624748 gatgatttgaagggagaactagatgaatacatccaaaaatacctcactggaaaaatcaaa 5624689
Query: 723 gtaataagaaatacaaagcgtgagggattgattcgcggaagaatgattggagcagcccac 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5624688 gtaataagaaatacaaagcgtgagggattgattcgcggaagaatgattggagcagcccac 5624629
Query: 783 gcgacaggt 791
|||||||||
Sbjct: 5624628 gcgacaggt 5624620
Score = 248 bits (125), Expect = 5e-63
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 372 ggtatgatttttaatgaacgtgatcaggagttgagagacttggggtatcagaaacatgcc 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5629397 ggtatgatttttaatgaacgtgatcaggagttgagagacttggggtatcagaaacatgcc 5629338
Query: 432 ttcaatatgcttattagtaaccgcttgggctaccatagagatgtgccagatacaaggaat 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5629337 ttcaatatgcttattagtaaccgcttgggctaccatagagatgtgccagatacaaggaat 5629278
Query: 492 gcagc 496
|||||
Sbjct: 5629277 gcagc 5629273
Score = 79.8 bits (40), Expect = 3e-12
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 1 tgcttttgctcggccctctcagggacagctcttccccagg 40
||||||||||||||||||||||||||||||||||||||||
Sbjct: 5637503 tgcttttgctcggccctctcagggacagctcttccccagg 5637464
>Sscrofa_Chr11
|| Length = 87690581
Score = 69.9 bits (35), Expect = 2e-09
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 665 tgatttgaagggagaactagatgaatacatccaaaaatacctcactggaaaaatcaaagt 724
||||||||| ||||| ||||||||| | ||||||||||||||| |||||||| ||||
Sbjct: 28723602 tgatttgaaaggagagctagatgaagatgtccaaaaatacctcagtggaaaaactaaaga 28723543
Query: 725 aataagaaatacaaa 739
||||||||| |||||
Sbjct: 28723542 aataagaaacacaaa 28723528
Score = 58.0 bits (29), Expect = 9e-06
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 68 taggtctataatgggaagtgtcacagttcgatatttctgtt 108
|||||| |||||||||||||||||||| ||||||||||||
Sbjct: 28724554 taggtcgataatgggaagtgtcacagtctgatatttctgtt 28724514
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 30,599,105
Number of extensions: 227
Number of successful extensions: 227
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 227
Number of HSP's successfully gapped: 8
Length of query: 975
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 954
Effective length of database: 2,808,413,156
Effective search space: 2679226150824
Effective search space used: 2679226150824
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)