Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012118
(1332 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069941.1| lipid phosphate phosphohydrolase 3 [Bos taur... 397 e-111
Alignment gi|NP_001073798.1| lipid phosphate phosphohydrolase 1 [Bos taur... 186 4e-47
Alignment gi|NP_001039355.1| lipid phosphate phosphohydrolase 2 [Bos taur... 159 7e-39
Alignment gi|XP_002688955.1| PREDICTED: phosphatidic acid phosphatase typ... 140 3e-33
Alignment gi|XP_001789251.2| PREDICTED: phosphatidic acid phosphatase typ... 140 3e-33
Alignment gi|NP_001179332.1| lipid phosphate phosphatase-related protein ... 64 3e-10
Alignment gi|XP_002689915.1| PREDICTED: lipid phosphate phosphatase-relat... 64 3e-10
>ref|NP_001069941.1| lipid phosphate phosphohydrolase 3 [Bos taurus].
Length = 311
Score = 397 bits (1021), Expect = e-111
Identities = 197/238 (82%), Positives = 202/238 (84%)
Frame = +1
Query: 619 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 798
MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK
Sbjct: 1 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 60
Query: 799 PYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ 978
PYHRGFYCNDE+IKYP KTGETIND TGEFYRIYYLKEKSRSTIQ
Sbjct: 61 PYHRGFYCNDESIKYPQKTGETINDAVLTAVGIVIAILAIITGEFYRIYYLKEKSRSTIQ 120
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 1158
NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFL+VCNPDFSQINCS GYIQNY
Sbjct: 121 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLNVCNPDFSQINCSVGYIQNY 180
Query: 1159 KCRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLIMM 1332
+CRGEDSKVQEARKSFFSGHASF AR RG R++ PLLQFTLIMM
Sbjct: 181 RCRGEDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMM 238
>ref|NP_001073798.1| lipid phosphate phosphohydrolase 1 [Bos taurus].
Length = 285
Score = 186 bits (472), Expect = 4e-47
Identities = 97/204 (47%), Positives = 125/204 (61%)
Frame = +1
Query: 715 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 894
R+ + LD+ C+ +AGLPF I+ TS P+ RG +CNDE+IKYP K +TI
Sbjct: 6 RLPYVALDVLCVLLAGLPFAIL-TSRHTPFQRGLFCNDESIKYPYKE-DTIPYPLLGGII 63
Query: 895 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1074
GE +Y+ S S I+N Y+A +YK +G FLFG A SQS TDIAK SI
Sbjct: 64 IPFSIIVMIVGETLSVYFSLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSI 123
Query: 1075 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXX 1254
GRLRPHFL VC+PD+S+INCS+GYI+NY CRG KV+E R SF+SGH+SF
Sbjct: 124 GRLRPHFLDVCDPDWSKINCSDGYIENYICRGNAQKVKEGRLSFYSGHSSFSMYCMMFVA 183
Query: 1255 XXXPARLNXRGGRVVPPLLQFTLI 1326
AR+ R++ P LQF L+
Sbjct: 184 LYLQARMKGDWARLLRPTLQFGLV 207
>ref|NP_001039355.1| lipid phosphate phosphohydrolase 2 [Bos taurus].
Length = 287
Score = 159 bits (401), Expect = 7e-39
Identities = 88/205 (42%), Positives = 121/205 (59%)
Frame = +1
Query: 712 KRVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXX 891
+R + + LD+ C+ +A LP I+ T PY RGFYC D++I+YP + +TI
Sbjct: 3 RRWVFVLLDVLCVLVAALPCAIL-TFVNTPYKRGFYCGDDSIRYPYRP-DTITHGLMAGV 60
Query: 892 XXXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVS 1071
GE Y +Y + SRS N Y+AALYK VG FLFG A+SQS TD+AK
Sbjct: 61 IITATVILVSAGEAYLVYTDRLYSRSDFNN-YLAALYKVVGTFLFGAAVSQSLTDLAKYM 119
Query: 1072 IGRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXX 1251
GRLRP+FL+VC+PD+S++NCS Y+Q CRG + V E+R SF+SGH+SF
Sbjct: 120 TGRLRPNFLAVCDPDWSRVNCS-AYVQVEVCRGSSANVTESRLSFYSGHSSFGMYCMVFL 178
Query: 1252 XXXXPARLNXRGGRVVPPLLQFTLI 1326
ARL + R++ P +QF L+
Sbjct: 179 ALYVQARLCWKWARLLRPTVQFFLV 203
>ref|XP_002688955.1| PREDICTED: phosphatidic acid phosphatase type 2B-like [Bos taurus].
Length = 427
Score = 140 bits (352), Expect = 3e-33
Identities = 69/168 (41%), Positives = 96/168 (57%)
Frame = +1
Query: 721 LLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXX 900
LL+ LDL CL + LP ++ ET ++P+ +GF+CND TI+YP I D
Sbjct: 150 LLVALDLICLMLVSLPIVLSETGLLEPHIQGFFCNDTTIQYPRMAHYIIEDSALIKMGFF 209
Query: 901 XXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGR 1080
GE R+ L+ S + + + Y+A +YKQ+ F+FG S S T IAK++ G+
Sbjct: 210 ISIFTISLGELIRVRGLQLSSPAFMSSAYMAMIYKQLRAFIFGGLASFSLTSIAKMTTGQ 269
Query: 1081 LRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHAS 1224
LRPHFL+ C PD + NC GYI NY C G V +AR SF+S +AS
Sbjct: 270 LRPHFLATCLPDPTSFNCENGYITNYSCTGHPEDVLDARMSFYSENAS 317
>ref|XP_001789251.2| PREDICTED: phosphatidic acid phosphatase type 2B-like [Bos taurus].
Length = 427
Score = 140 bits (352), Expect = 3e-33
Identities = 69/168 (41%), Positives = 96/168 (57%)
Frame = +1
Query: 721 LLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXX 900
LL+ LDL CL + LP ++ ET ++P+ +GF+CND TI+YP I D
Sbjct: 150 LLVALDLICLMLVSLPIVLSETGLLEPHIQGFFCNDTTIQYPRMAHYIIEDSALIKMGFF 209
Query: 901 XXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGR 1080
GE R+ L+ S + + + Y+A +YKQ+ F+FG S S T IAK++ G+
Sbjct: 210 ISIFTISLGELIRVRGLQLSSPAFMSSAYMAMIYKQLRAFIFGGLASFSLTSIAKMTTGQ 269
Query: 1081 LRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHAS 1224
LRPHFL+ C PD + NC GYI NY C G V +AR SF+S +AS
Sbjct: 270 LRPHFLATCLPDPTSFNCENGYITNYSCTGHPEDVLDARMSFYSENAS 317
>ref|NP_001179332.1| lipid phosphate phosphatase-related protein type 1 [Bos taurus].
Length = 325
Score = 63.9 bits (154), Expect = 3e-10
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 22/233 (9%)
Frame = +1
Query: 679 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 849
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 850 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 981
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLLLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 982 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINC--SEGYIQN 1155
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSTDCRAHHQFINN 178
Query: 1156 YK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLL 1311
C G+ +++AR+SF S HA+ + + + R+ P+L
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVL 231
>ref|XP_002689915.1| PREDICTED: lipid phosphate phosphatase-related protein type 1-like
[Bos taurus].
Length = 325
Score = 63.9 bits (154), Expect = 3e-10
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 22/233 (9%)
Frame = +1
Query: 679 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 849
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 850 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 981
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLLLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 982 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINC--SEGYIQN 1155
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSTDCRAHHQFINN 178
Query: 1156 YK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLL 1311
C G+ +++AR+SF S HA+ + + + R+ P+L
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVL 231
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 47,430,564
Number of extensions: 1308295
Number of successful extensions: 5575
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 5540
Number of HSP's successfully gapped: 7
Length of query: 444
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 339
Effective length of database: 14,207,134
Effective search space: 4816218426
Effective search space used: 4816218426
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA 20110601C-012118
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012118
(1332 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536696.2| PREDICTED: similar to phosphatidic acid phospha... 392 e-109
Alignment gi|XP_855263.1| PREDICTED: similar to phosphatidic acid phospha... 147 3e-35
Alignment gi|XP_849687.1| PREDICTED: similar to phosphatidic acid phospha... 142 6e-34
Alignment gi|XP_538755.2| PREDICTED: similar to plasticity related gene 3... 65 2e-10
Alignment gi|XP_867229.1| PREDICTED: similar to plasticity related gene 3... 62 2e-09
Alignment gi|XP_547267.2| PREDICTED: similar to plasticity related gene 1... 57 5e-08
Alignment gi|XP_537060.2| PREDICTED: similar to plasticity-related protei... 55 2e-07
Alignment gi|XP_867252.1| PREDICTED: similar to plasticity related gene 3... 52 1e-06
>ref|XP_536696.2| PREDICTED: similar to phosphatidic acid phosphatase type 2B [Canis
familiaris].
Length = 312
Score = 392 bits (1008), Expect = e-109
Identities = 193/238 (81%), Positives = 200/238 (84%)
Frame = +1
Query: 619 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 798
MQNYKYDKAI ESK GGSPALNNNPRKGGSKR+LLICLDLFCLFMAGLPF+IIETSTIK
Sbjct: 1 MQNYKYDKAIAPESKTGGSPALNNNPRKGGSKRMLLICLDLFCLFMAGLPFLIIETSTIK 60
Query: 799 PYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ 978
PYHRGFYCNDE+IKYPLK GETIND TGEFYRIYYLKEKSRSTIQ
Sbjct: 61 PYHRGFYCNDESIKYPLKIGETINDAVLCAVGIVIAILAIITGEFYRIYYLKEKSRSTIQ 120
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 1158
NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFL+VCNPDFSQINCSEGYIQNY
Sbjct: 121 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLNVCNPDFSQINCSEGYIQNY 180
Query: 1159 KCRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLIMM 1332
KCRG+DSKVQEARKSFFSGHASF AR RG R++ PLLQFTLIMM
Sbjct: 181 KCRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMM 238
>ref|XP_855263.1| PREDICTED: similar to phosphatidic acid phosphatase type 2C isoform 3
[Canis familiaris].
Length = 379
Score = 147 bits (370), Expect = 3e-35
Identities = 86/191 (45%), Positives = 114/191 (59%), Gaps = 1/191 (0%)
Frame = +1
Query: 757 AGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFY 936
A LPF I+ T PY RGFYC D++I+YP + +TI GE Y
Sbjct: 109 ASLPFAIL-TLVNAPYKRGFYCADDSIRYPYRP-DTITHGLMAGVTITATVVLVSAGEAY 166
Query: 937 RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD 1116
+Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK IGRLRP+FL+VC+PD
Sbjct: 167 LVYTDRLYSRSDFNN-YVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPD 225
Query: 1117 FSQINCSEGYIQNYK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGR 1293
+S++NCS Y+Q K CRG + V E+R SF+SGH+SF ARL + R
Sbjct: 226 WSRVNCSL-YVQVEKVCRGSPANVTESRLSFYSGHSSFGMYCMMFLALYVQARLCWKWAR 284
Query: 1294 VVPPLLQFTLI 1326
++ P +QF L+
Sbjct: 285 LLRPTVQFFLL 295
>ref|XP_849687.1| PREDICTED: similar to phosphatidic acid phosphatase type 2A isoform 1
isoform 1 [Canis familiaris].
Length = 215
Score = 142 bits (359), Expect = 6e-34
Identities = 70/134 (52%), Positives = 88/134 (65%)
Frame = +1
Query: 925 GEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSV 1104
GE +YY S S I+N Y+A +YK +G FLFG A SQS TDIAK SIGRLRPHFL V
Sbjct: 4 GEALSVYYNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSIGRLRPHFLDV 63
Query: 1105 CNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXR 1284
C+PD+S+INCS GY++NY C+G KV+E R SF+SGH+SF AR+
Sbjct: 64 CDPDWSKINCSVGYVENYICQGNAQKVREGRLSFYSGHSSFSMYCMLFVALYLQARMKGD 123
Query: 1285 GGRVVPPLLQFTLI 1326
R++ P LQF L+
Sbjct: 124 WARLLRPTLQFGLV 137
>ref|XP_538755.2| PREDICTED: similar to plasticity related gene 3 isoform 1 [Canis
familiaris].
Length = 325
Score = 64.7 bits (156), Expect = 2e-10
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 22/233 (9%)
Frame = +1
Query: 679 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 849
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSHSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 850 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 981
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 982 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINC--SEGYIQN 1155
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSTDCRAHHQFINN 178
Query: 1156 YK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLL 1311
C G+ +++AR+SF S HA+ + + + R+ P+L
Sbjct: 179 GNICTGDMEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVL 231
>ref|XP_867229.1| PREDICTED: similar to plasticity related gene 3 isoform 2 [Canis
familiaris].
Length = 309
Score = 61.6 bits (148), Expect = 2e-09
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 19/195 (9%)
Frame = +1
Query: 784 TSTIKPYHRGFYCNDETIKYPLKTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLK 954
T T + + +GF+C D + P E I GE +Y++K
Sbjct: 22 TDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIK 80
Query: 955 EKSRSTIQ-------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHF 1095
S I NP + + + +G F FG + F + +V G L P+F
Sbjct: 81 STRESLIAQEKTILTGECCYLNPLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYF 140
Query: 1096 LSVCNPDFSQINC--SEGYIQNYK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXP 1266
L+VC P+++ +C +I N C G+ +++AR+SF S HA+
Sbjct: 141 LTVCKPNYTSTDCRAHHQFINNGNICTGDMEVIEKARRSFPSKHAALSIYSALYATMYIT 200
Query: 1267 ARLNXRGGRVVPPLL 1311
+ + + R+ P+L
Sbjct: 201 STIKTKSSRLAKPVL 215
>ref|XP_547267.2| PREDICTED: similar to plasticity related gene 1 [Canis familiaris].
Length = 714
Score = 56.6 bits (135), Expect = 5e-08
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = +1
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS---EGYI 1149
N ++ + VG +FG + TDI ++S G P+FL+VC P+++ +N S YI
Sbjct: 120 NSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKENSYI 179
Query: 1150 QNYKCRGED-SKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLI 1326
C G D + + RKSF S HA+ + L +++ PLL FT I
Sbjct: 180 VEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNSTLTD-SSKLLKPLLVFTFI 238
Query: 1327 M 1329
+
Sbjct: 239 I 239
>ref|XP_537060.2| PREDICTED: similar to plasticity-related protein 3 [Canis
familiaris].
Length = 252
Score = 55.1 bits (131), Expect = 2e-07
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Frame = +1
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQ-- 1152
NP V + +G + FG + F + +V G L PHFL++C P+++ + C + Y Q
Sbjct: 44 NPLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQ-YTQFI 102
Query: 1153 --NYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLI 1326
C G + ARK+F S A+ + +G R+ P+L L+
Sbjct: 103 SGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLM 162
Query: 1327 MM 1332
+
Sbjct: 163 CL 164
>ref|XP_867252.1| PREDICTED: similar to plasticity related gene 3 isoform 4 [Canis
familiaris].
Length = 333
Score = 52.0 bits (123), Expect = 1e-06
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 26/173 (15%)
Frame = +1
Query: 784 TSTIKPYHRGFYCNDETIKYPLKTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLK 954
T T + + +GF+C D + P E I GE +Y++K
Sbjct: 14 TDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIK 72
Query: 955 EKSRSTIQ-------------NPYVAALYKQVG-------CFLFGCAISQSFTDIAKVSI 1074
S I NP + + + +G F FG + F + +V
Sbjct: 73 STRESLIAQEKTILTGECCYLNPLLRRIIRFIGDLEETMRVFAFGLFATDIFVNAGQVVT 132
Query: 1075 GRLRPHFLSVCNPDFSQINC--SEGYIQNYK-CRGEDSKVQEARKSFFSGHAS 1224
G L P+FL+VC P+++ +C +I N C G+ +++AR+SF S HA+
Sbjct: 133 GHLTPYFLTVCKPNYTSTDCRAHHQFINNGNICTGDMEVIEKARRSFPSKHAA 185
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 49,427,276
Number of extensions: 1309162
Number of successful extensions: 6013
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 5982
Number of HSP's successfully gapped: 8
Length of query: 444
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 338
Effective length of database: 15,340,888
Effective search space: 5185220144
Effective search space used: 5185220144
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012118
(1332 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003128019.2| PREDICTED: lipid phosphate phosphohydrolase ... 288 4e-78
Alignment gi|XP_003356494.1| PREDICTED: hypothetical protein LOC100627535... 159 3e-39
Alignment gi|NP_001137195.1| lipid phosphate phosphohydrolase 2 [Sus scro... 159 3e-39
Alignment gi|XP_003133999.2| PREDICTED: lipid phosphate phosphohydrolase ... 138 8e-33
Alignment gi|XP_001928256.1| PREDICTED: lipid phosphate phosphatase-relat... 64 2e-10
Alignment gi|XP_003353643.1| PREDICTED: lipid phosphate phosphatase-relat... 61 1e-09
Alignment gi|XP_003355334.1| PREDICTED: lipid phosphate phosphatase-relat... 57 3e-08
Alignment gi|XP_003125945.2| PREDICTED: lipid phosphate phosphatase-relat... 55 9e-08
>ref|XP_003128019.2| PREDICTED: lipid phosphate phosphohydrolase 3-like [Sus scrofa].
Length = 294
Score = 288 bits (738), Expect = 4e-78
Identities = 140/157 (89%), Positives = 141/157 (89%)
Frame = +1
Query: 757 AGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFY 936
+GLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETIND TGEFY
Sbjct: 89 SGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDAVLCAVGIVIAILAIITGEFY 148
Query: 937 RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD 1116
RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD
Sbjct: 149 RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD 208
Query: 1117 FSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASF 1227
FSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASF
Sbjct: 209 FSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASF 245
>ref|XP_003356494.1| PREDICTED: hypothetical protein LOC100627535 [Sus scrofa].
Length = 189
Score = 159 bits (402), Expect = 3e-39
Identities = 81/105 (77%), Positives = 81/105 (77%)
Frame = +2
Query: 134 AENKPRRSXXXXXXXXXXXXXXXXXXXXXXXXSRSWGSAPRWLGSAQLPFIKQPAAEEGG 313
AENKPRRS SRSWGSAPRWLGSAQLPFIKQPAAEEGG
Sbjct: 85 AENKPRRSQRRRRRRQQQQQQQQQQQQQEEEESRSWGSAPRWLGSAQLPFIKQPAAEEGG 144
Query: 314 RAPALPPRCFAHGHASSARPEQRSAAEVSARELTLFPLDFRTIRG 448
RAPALPPRCFAHGHASSARPEQRSAAEVSARELTLFPLDFRTIRG
Sbjct: 145 RAPALPPRCFAHGHASSARPEQRSAAEVSARELTLFPLDFRTIRG 189
>ref|NP_001137195.1| lipid phosphate phosphohydrolase 2 [Sus scrofa].
Length = 287
Score = 159 bits (402), Expect = 3e-39
Identities = 88/205 (42%), Positives = 122/205 (59%)
Frame = +1
Query: 712 KRVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXX 891
+R + + LD+ C+ +A LPF I+ T PY RGFYC D++I+YP + +TI
Sbjct: 3 RRWVFVLLDVLCVLVASLPFTIL-TFVNAPYKRGFYCGDDSIRYPYRP-DTITHGLMAGV 60
Query: 892 XXXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVS 1071
GE Y +Y + SRS N Y+AALYK +G FLFG A+SQS TD+AK
Sbjct: 61 IITATVILVSAGEAYLVYTDRLYSRSDFNN-YLAALYKVLGTFLFGAAVSQSLTDLAKYM 119
Query: 1072 IGRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXX 1251
GRLRP+FL+VC+PD+S++NCS Y+Q CRG + V E+R SF+SGH+SF
Sbjct: 120 TGRLRPNFLAVCDPDWSRVNCSV-YVQVDVCRGSPANVTESRLSFYSGHSSFGMYCMVFL 178
Query: 1252 XXXXPARLNXRGGRVVPPLLQFTLI 1326
ARL + R++ P +QF L+
Sbjct: 179 ALYVQARLCWKWARLLRPTVQFFLV 203
>ref|XP_003133999.2| PREDICTED: lipid phosphate phosphohydrolase 1-like [Sus scrofa].
Length = 252
Score = 138 bits (347), Expect = 8e-33
Identities = 80/204 (39%), Positives = 104/204 (50%)
Frame = +1
Query: 715 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 894
R+ + LD+ C+ +AGLPF I+ TS P+ RG +CNDE+IKYP K +TI
Sbjct: 6 RLPYVALDVLCVLLAGLPFAIL-TSRHTPFQRGLFCNDESIKYPYKE-DTIPYPLLGGII 63
Query: 895 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1074
GE +Y+ TDIAK SI
Sbjct: 64 IPFSIIVMIVGETLSVYFX---------------------------------TDIAKYSI 90
Query: 1075 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXX 1254
GRLRPHFL VC+PD+S+INCS+GYI+NY CRG KV+E R SF+SGH+SF
Sbjct: 91 GRLRPHFLDVCDPDWSKINCSDGYIENYICRGNAQKVKEGRLSFYSGHSSFSMYCMLFVA 150
Query: 1255 XXXPARLNXRGGRVVPPLLQFTLI 1326
AR+ R++ P LQF L+
Sbjct: 151 LYLQARMKGDWARLLRPTLQFGLV 174
>ref|XP_001928256.1| PREDICTED: lipid phosphate phosphatase-related protein type 1-like
isoform 1 [Sus scrofa].
Length = 325
Score = 63.9 bits (154), Expect = 2e-10
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 22/233 (9%)
Frame = +1
Query: 679 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 849
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 850 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 981
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 982 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINC--SEGYIQN 1155
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCRAHHQFINN 178
Query: 1156 YK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLL 1311
C G+ +++AR+SF S HA+ + + + R+ P+L
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVL 231
>ref|XP_003353643.1| PREDICTED: lipid phosphate phosphatase-related protein type 1-like
isoform 2 [Sus scrofa].
Length = 301
Score = 61.2 bits (147), Expect = 1e-09
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 19/195 (9%)
Frame = +1
Query: 784 TSTIKPYHRGFYCNDETIKYPLKTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLK 954
T T + + +GF+C D + P E I GE +Y++K
Sbjct: 14 TDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIK 72
Query: 955 EKSRSTIQ-------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHF 1095
S I NP + + + +G F FG + F + +V G L P+F
Sbjct: 73 STRESLIAQEKTILTGECCYLNPLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYF 132
Query: 1096 LSVCNPDFSQINC--SEGYIQNYK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXP 1266
L+VC P+++ +C +I N C G+ +++AR+SF S HA+
Sbjct: 133 LTVCKPNYTSADCRAHHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYIT 192
Query: 1267 ARLNXRGGRVVPPLL 1311
+ + + R+ P+L
Sbjct: 193 STIKTKSSRLAKPVL 207
>ref|XP_003355334.1| PREDICTED: lipid phosphate phosphatase-related protein type 4-like
[Sus scrofa].
Length = 639
Score = 56.6 bits (135), Expect = 3e-08
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = +1
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS---EGYI 1149
N ++ + VG +FG + TDI ++S G P+FL+VC P+++ +N S YI
Sbjct: 45 NSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKENSYI 104
Query: 1150 QNYKCRGED-SKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLI 1326
C G D + + RKSF S HA+ + L +++ PLL FT I
Sbjct: 105 VEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNSTLTD-SSKLLKPLLVFTFI 163
Query: 1327 M 1329
+
Sbjct: 164 I 164
>ref|XP_003125945.2| PREDICTED: lipid phosphate phosphatase-related protein type 5-like
[Sus scrofa].
Length = 256
Score = 55.1 bits (131), Expect = 9e-08
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Frame = +1
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQ-- 1152
NP V + +G + FG + F + +V G L PHFL++C P+++ + C + Y Q
Sbjct: 53 NPLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQ-YTQFI 111
Query: 1153 --NYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLI 1326
C G + ARK+F S A+ + +G R+ P+L L+
Sbjct: 112 SGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLM 171
Query: 1327 MM 1332
+
Sbjct: 172 CL 173
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,122,458
Number of extensions: 923161
Number of successful extensions: 3774
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 3750
Number of HSP's successfully gapped: 9
Length of query: 444
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 342
Effective length of database: 8,804,438
Effective search space: 3011117796
Effective search space used: 3011117796
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012118
(1332 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_542122.1| lipid phosphate phosphohydrolase 3 [Mus musculu... 385 e-107
Alignment gi|NP_032929.1| lipid phosphate phosphohydrolase 1 isoform 2 [M... 183 2e-46
Alignment gi|NP_032273.1| lipid phosphate phosphohydrolase 1 isoform 1 [M... 178 1e-44
Alignment gi|NP_056632.2| lipid phosphate phosphohydrolase 2 [Mus musculu... 169 6e-42
Alignment gi|NP_848871.1| lipid phosphate phosphatase-related protein typ... 63 5e-10
Alignment gi|NP_808332.3| lipid phosphate phosphatase-related protein typ... 61 2e-09
Alignment gi|NP_083701.2| lipid phosphate phosphatase-related protein typ... 56 6e-08
Alignment gi|NP_659184.1| lipid phosphate phosphatase-related protein typ... 50 5e-06
>ref|NP_542122.1| lipid phosphate phosphohydrolase 3 [Mus musculus].
Length = 312
Score = 385 bits (988), Expect = e-107
Identities = 190/238 (79%), Positives = 198/238 (83%)
Frame = +1
Query: 619 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 798
MQ+YKYDKAIV ESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMA LPF+IIETSTIK
Sbjct: 1 MQSYKYDKAIVPESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAALPFLIIETSTIK 60
Query: 799 PYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ 978
PY RGFYCNDE+IKYPLK ETIND TGEFYRIYYLKEKSRST Q
Sbjct: 61 PYRRGFYCNDESIKYPLKVSETINDAVLCAVGIVIAILAIITGEFYRIYYLKEKSRSTTQ 120
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 1158
NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVC+PDFSQINCSEGYIQNY
Sbjct: 121 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCDPDFSQINCSEGYIQNY 180
Query: 1159 KCRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLIMM 1332
+CRGEDSKVQEARKSFFSGHASF AR RG R++ PLLQFTL+MM
Sbjct: 181 RCRGEDSKVQEARKSFFSGHASFSMFTMLYLVLYLQARFTWRGARLLRPLLQFTLLMM 238
>ref|NP_032929.1| lipid phosphate phosphohydrolase 1 isoform 2 [Mus musculus].
Length = 283
Score = 183 bits (465), Expect = 2e-46
Identities = 93/204 (45%), Positives = 127/204 (62%)
Frame = +1
Query: 715 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 894
R+ + LD+ C+ +AGLPF I+ TS P+ RG +CND++IKYP K +TI
Sbjct: 6 RLPYVALDVICVLLAGLPFAIL-TSRHTPFQRGIFCNDDSIKYPYKE-DTIPYALLGGIV 63
Query: 895 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1074
GE +Y+ S S + NPY+A +YK VG FLFG + SQS TDIAK +I
Sbjct: 64 IPFCIIVMSIGESLSVYFNVLHSNSFVGNPYIATIYKAVGAFLFGVSASQSLTDIAKYTI 123
Query: 1075 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXX 1254
G LRPHFL++CNPD+S+INCS+GYI++Y C+G + KV+E R SF+SGH+SF
Sbjct: 124 GSLRPHFLAICNPDWSKINCSDGYIEDYICQGNEEKVKEGRLSFYSGHSSFSMYCMLFVA 183
Query: 1255 XXXPARLNXRGGRVVPPLLQFTLI 1326
AR+ R++ P+LQF LI
Sbjct: 184 LYLQARMKGDWARLLRPMLQFGLI 207
>ref|NP_032273.1| lipid phosphate phosphohydrolase 1 isoform 1 [Mus musculus].
Length = 284
Score = 178 bits (451), Expect = 1e-44
Identities = 86/204 (42%), Positives = 122/204 (59%)
Frame = +1
Query: 715 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 894
R+ + LD+ C+ +A +P I++ + P+ RGF+C D ++KYP TI
Sbjct: 6 RLPYVALDVICVLLAAMPMTILKLGKVYPFQRGFFCTDNSVKYPYHDS-TIPSRILAILG 64
Query: 895 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1074
GE +Y+ S S + NPY+A +YK VG FLFG + SQS TDIAK +I
Sbjct: 65 LGLPIFSMSIGESLSVYFNVLHSNSFVGNPYIATIYKAVGAFLFGVSASQSLTDIAKYTI 124
Query: 1075 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXX 1254
G LRPHFL++CNPD+S+INCS+GYI++Y C+G + KV+E R SF+SGH+SF
Sbjct: 125 GSLRPHFLAICNPDWSKINCSDGYIEDYICQGNEEKVKEGRLSFYSGHSSFSMYCMLFVA 184
Query: 1255 XXXPARLNXRGGRVVPPLLQFTLI 1326
AR+ R++ P+LQF LI
Sbjct: 185 LYLQARMKGDWARLLRPMLQFGLI 208
>ref|NP_056632.2| lipid phosphate phosphohydrolase 2 [Mus musculus].
Length = 276
Score = 169 bits (427), Expect = 6e-42
Identities = 93/205 (45%), Positives = 124/205 (60%)
Frame = +1
Query: 712 KRVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXX 891
+R + + LD+ C+ +A LPFII+ T PY RGFYC D++I+YP + +TI
Sbjct: 3 RRWVFVLLDVLCVLVASLPFIIL-TLVNAPYKRGFYCGDDSIRYPYRP-DTITHGLMAGV 60
Query: 892 XXXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVS 1071
GE Y +Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK
Sbjct: 61 IITATVILVSLGEAYLVYTDRLYSRSNFNN-YVAAIYKVLGTFLFGAAVSQSLTDLAKYM 119
Query: 1072 IGRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXX 1251
IGRLRP FL+VC+PD+SQ+NCS GY+Q CRG + V EAR SF+SGH+SF
Sbjct: 120 IGRLRPSFLAVCDPDWSQVNCS-GYVQLEVCRGSPANVTEARLSFYSGHSSFGMYCMLFL 178
Query: 1252 XXXXPARLNXRGGRVVPPLLQFTLI 1326
ARL + R++ P +QF L+
Sbjct: 179 ALYVQARLCWKWARLLRPTVQFFLV 203
>ref|NP_848871.1| lipid phosphate phosphatase-related protein type 1 [Mus musculus].
Length = 325
Score = 63.2 bits (152), Expect = 5e-10
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 22/233 (9%)
Frame = +1
Query: 679 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 849
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVENNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 850 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 981
E I+ GE +Y++K S I +
Sbjct: 60 PGTEEESFISPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAEEKMILTGDCCYLS 118
Query: 982 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINC--SEGYIQN 1155
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C + +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCQPNYTSTDCRAHQQFINN 178
Query: 1156 YK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLL 1311
C G+ +++AR+SF S HA+ + + + R+ P+L
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVL 231
>ref|NP_808332.3| lipid phosphate phosphatase-related protein type 4 [Mus musculus].
Length = 766
Score = 61.2 bits (147), Expect = 2e-09
Identities = 54/200 (27%), Positives = 79/200 (39%), Gaps = 18/200 (9%)
Frame = +1
Query: 784 TSTIKPYHRGFYCNDETIKYPL--KTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKE 957
T KP H GF C D ++ P T E I GE +Y
Sbjct: 92 TDVFKPVHSGFSCYDRSLSMPYIEPTQEAIPFLMLLSLAFAGPAITIMVGEGI-LYCCLS 150
Query: 958 KSRSTIQ------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLS 1101
K R+ N ++ + VG +FG + TDI ++S G P+FL+
Sbjct: 151 KRRNGAGLEPNINAGGCNFNSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLT 210
Query: 1102 VCNPDFSQINCS---EGYIQNYKCRGED-SKVQEARKSFFSGHASFXXXXXXXXXXXXPA 1269
VC P+++ +N S YI C G D + + RKSF S HA+ +
Sbjct: 211 VCKPNYTSLNVSCKENSYIVEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNS 270
Query: 1270 RLNXRGGRVVPPLLQFTLIM 1329
L +++ PLL FT I+
Sbjct: 271 TLTD-SSKLLKPLLVFTFII 289
>ref|NP_083701.2| lipid phosphate phosphatase-related protein type 5 [Mus musculus].
Length = 316
Score = 56.2 bits (134), Expect = 6e-08
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Frame = +1
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQ-- 1152
NP V + +G + FG + F + +V G L PHFL++C P+++ + C + Y Q
Sbjct: 113 NPLVRRTVRFLGIYAFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQ-YTQFI 171
Query: 1153 --NYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLI 1326
C G + ARK+F S A+ + + +G R+ P+L L+
Sbjct: 172 SGEEACTGNPDLIMRARKTFPSKEAALSVYAATYLTMYITSTIKAKGTRLAKPVLCLGLM 231
Query: 1327 MM 1332
+
Sbjct: 232 CL 233
>ref|NP_659184.1| lipid phosphate phosphatase-related protein type 2 [Mus musculus].
Length = 343
Score = 49.7 bits (117), Expect = 5e-06
Identities = 45/207 (21%), Positives = 74/207 (35%), Gaps = 26/207 (12%)
Frame = +1
Query: 784 TSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXT---GEFYRIYYLK 954
T T + +GF+C D P E + T GE R ++
Sbjct: 39 TDTFPVHTQGFFCYDSAYAKPYPGPEAASRAPPALIYALVTAGPTLTILLGELARAFFPA 98
Query: 955 EKSRSTIQ-------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHF 1095
S S + +P + L + +G + FG + F + +V G PHF
Sbjct: 99 PPSSSPVSGESTIVSGACCRFSPPLRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHF 158
Query: 1096 LSVCNPDFSQINC---------SEGYIQNYK-CRGEDSKVQEARKSFFSGHASFXXXXXX 1245
LSVC P+++ + C + ++ + C G S V AR++F A+
Sbjct: 159 LSVCRPNYTALGCPPPSPDRPGPDRFVTDQSACAGSPSLVAAARRAFPCKDAALCAYAVT 218
Query: 1246 XXXXXXPARLNXRGGRVVPPLLQFTLI 1326
+G R+V P L L+
Sbjct: 219 YTAMYVTLVFRVKGSRLVKPSLCLALL 245
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 40,601,304
Number of extensions: 1043766
Number of successful extensions: 4495
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 4477
Number of HSP's successfully gapped: 8
Length of query: 444
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 340
Effective length of database: 12,493,815
Effective search space: 4247897100
Effective search space used: 4247897100
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012118
(1332 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_003704.3| lipid phosphate phosphohydrolase 3 [Homo sapien... 390 e-108
Alignment gi|NP_003702.2| lipid phosphate phosphohydrolase 1 isoform 1 [H... 179 7e-45
Alignment gi|NP_795714.1| lipid phosphate phosphohydrolase 1 isoform 2 [H... 171 1e-42
Alignment gi|NP_003703.1| lipid phosphate phosphohydrolase 2 isoform 1 [H... 161 1e-39
Alignment gi|NP_808211.1| lipid phosphate phosphohydrolase 2 isoform 3 [H... 149 6e-36
Alignment gi|NP_803545.1| lipid phosphate phosphohydrolase 2 isoform 2 [H... 122 8e-28
Alignment gi|NP_997182.1| lipid phosphate phosphatase-related protein typ... 63 5e-10
Alignment gi|NP_060223.2| lipid phosphate phosphatase-related protein typ... 63 5e-10
Alignment gi|NP_055654.2| lipid phosphate phosphatase-related protein typ... 63 7e-10
Alignment gi|NP_001159724.1| lipid phosphate phosphatase-related protein ... 59 8e-09
>ref|NP_003704.3| lipid phosphate phosphohydrolase 3 [Homo sapiens].
Length = 311
Score = 390 bits (1001), Expect = e-108
Identities = 194/238 (81%), Positives = 201/238 (84%)
Frame = +1
Query: 619 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 798
MQNYKYDKAIV ESKNGGSPALNNNPR+ GSKRVLLICLDLFCLFMAGLPF+IIETSTIK
Sbjct: 1 MQNYKYDKAIVPESKNGGSPALNNNPRRSGSKRVLLICLDLFCLFMAGLPFLIIETSTIK 60
Query: 799 PYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ 978
PYHRGFYCNDE+IKYPLKTGETIND TGEFYRIYYLK KSRSTIQ
Sbjct: 61 PYHRGFYCNDESIKYPLKTGETINDAVLCAVGIVIAILAIITGEFYRIYYLK-KSRSTIQ 119
Query: 979 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 1158
NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY
Sbjct: 120 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 179
Query: 1159 KCRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLLQFTLIMM 1332
+CRG+DSKVQEARKSFFSGHASF AR RG R++ PLLQFTLIMM
Sbjct: 180 RCRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMM 237
>ref|NP_003702.2| lipid phosphate phosphohydrolase 1 isoform 1 [Homo sapiens].
Length = 284
Score = 179 bits (453), Expect = 7e-45
Identities = 95/204 (46%), Positives = 123/204 (60%)
Frame = +1
Query: 715 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 894
R+ + LD+ C+ +AGLPF I+ TS P+ RG +CNDE+IKYP K +TI
Sbjct: 6 RLPYVALDVLCVLLAGLPFAIL-TSRHTPFQRGVFCNDESIKYPYKE-DTIPYALLGGII 63
Query: 895 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1074
GE +Y S S I+N Y+A +YK +G FLFG A SQS TDIAK SI
Sbjct: 64 IPFSIIVIILGETLSVYCNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSI 123
Query: 1075 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXX 1254
GRLRPHFL VC+PD+S+INCS+GYI+ Y CRG +V+E R SF+SGH+SF
Sbjct: 124 GRLRPHFLDVCDPDWSKINCSDGYIEYYICRGNAERVKEGRLSFYSGHSSFSMYCMLFVA 183
Query: 1255 XXXPARLNXRGGRVVPPLLQFTLI 1326
AR+ R++ P LQF L+
Sbjct: 184 LYLQARMKGDWARLLRPTLQFGLV 207
>ref|NP_795714.1| lipid phosphate phosphohydrolase 1 isoform 2 [Homo sapiens].
Length = 285
Score = 171 bits (434), Expect = 1e-42
Identities = 86/204 (42%), Positives = 117/204 (57%)
Frame = +1
Query: 715 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 894
R+ + LD+ C+ +A +P +++ I P+ RGF+C D +I YP T+
Sbjct: 6 RLPYVALDVLCVLLASMPMAVLKLGQIYPFQRGFFCKDNSINYPYHDS-TVTSTVLILVG 64
Query: 895 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1074
GE +Y S S I+N Y+A +YK +G FLFG A SQS TDIAK SI
Sbjct: 65 VGLPISSIILGETLSVYCNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSI 124
Query: 1075 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFXXXXXXXXX 1254
GRLRPHFL VC+PD+S+INCS+GYI+ Y CRG +V+E R SF+SGH+SF
Sbjct: 125 GRLRPHFLDVCDPDWSKINCSDGYIEYYICRGNAERVKEGRLSFYSGHSSFSMYCMLFVA 184
Query: 1255 XXXPARLNXRGGRVVPPLLQFTLI 1326
AR+ R++ P LQF L+
Sbjct: 185 LYLQARMKGDWARLLRPTLQFGLV 208
>ref|NP_003703.1| lipid phosphate phosphohydrolase 2 isoform 1 [Homo sapiens].
Length = 288
Score = 161 bits (408), Expect = 1e-39
Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 1/206 (0%)
Frame = +1
Query: 712 KRVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXX 891
+R + + LD+ CL +A LPF I+ T PY RGFYC D++I+YP + +TI
Sbjct: 3 RRWVFVLLDVLCLLVASLPFAIL-TLVNAPYKRGFYCGDDSIRYPYRP-DTITHGLMAGV 60
Query: 892 XXXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVS 1071
GE Y +Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK
Sbjct: 61 TITATVILVSAGEAYLVYTDRLYSRSDFNN-YVAAVYKVLGTFLFGAAVSQSLTDLAKYM 119
Query: 1072 IGRLRPHFLSVCNPDFSQINCSEGYIQNYK-CRGEDSKVQEARKSFFSGHASFXXXXXXX 1248
IGRLRP+FL+VC+PD+S++NCS Y+Q K CRG + V EAR SF+SGH+SF
Sbjct: 120 IGRLRPNFLAVCDPDWSRVNCSV-YVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVF 178
Query: 1249 XXXXXPARLNXRGGRVVPPLLQFTLI 1326
ARL + R++ P +QF L+
Sbjct: 179 LALYVQARLCWKWARLLRPTVQFFLV 204
>ref|NP_808211.1| lipid phosphate phosphohydrolase 2 isoform 3 [Homo sapiens].
Length = 309
Score = 149 bits (376), Expect = 6e-36
Identities = 87/191 (45%), Positives = 114/191 (59%), Gaps = 1/191 (0%)
Frame = +1
Query: 757 AGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFY 936
A LPF I+ T PY RGFYC D++I+YP + +TI GE Y
Sbjct: 39 ASLPFAIL-TLVNAPYKRGFYCGDDSIRYPYRP-DTITHGLMAGVTITATVILVSAGEAY 96
Query: 937 RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD 1116
+Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK IGRLRP+FL+VC+PD
Sbjct: 97 LVYTDRLYSRSDFNN-YVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPD 155
Query: 1117 FSQINCSEGYIQNYK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGR 1293
+S++NCS Y+Q K CRG + V EAR SF+SGH+SF ARL + R
Sbjct: 156 WSRVNCSV-YVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWAR 214
Query: 1294 VVPPLLQFTLI 1326
++ P +QF L+
Sbjct: 215 LLRPTVQFFLV 225
>ref|NP_803545.1| lipid phosphate phosphohydrolase 2 isoform 2 [Homo sapiens].
Length = 232
Score = 122 bits (306), Expect = 8e-28
Identities = 68/135 (50%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Frame = +1
Query: 925 GEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSV 1104
GE Y +Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK IGRLRP+FL+V
Sbjct: 16 GEAYLVYTDRLYSRSDFNN-YVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAV 74
Query: 1105 CNPDFSQINCSEGYIQNYK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNX 1281
C+PD+S++NCS Y+Q K CRG + V EAR SF+SGH+SF ARL
Sbjct: 75 CDPDWSRVNCSV-YVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCW 133
Query: 1282 RGGRVVPPLLQFTLI 1326
+ R++ P +QF L+
Sbjct: 134 KWARLLRPTVQFFLV 148
>ref|NP_997182.1| lipid phosphate phosphatase-related protein type 1 [Homo sapiens].
Length = 325
Score = 63.2 bits (152), Expect = 5e-10
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 22/233 (9%)
Frame = +1
Query: 679 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 849
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 850 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 981
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 982 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1155
P + + + G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINN 178
Query: 1156 YK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLL 1311
C G+ +++AR+SF S HA+ + + + R+ P+L
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVL 231
>ref|NP_060223.2| lipid phosphate phosphatase-related protein type 1 [Homo sapiens].
Length = 325
Score = 63.2 bits (152), Expect = 5e-10
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 22/233 (9%)
Frame = +1
Query: 679 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 849
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 850 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 981
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 982 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1155
P + + + G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINN 178
Query: 1156 YK-CRGEDSKVQEARKSFFSGHASFXXXXXXXXXXXXPARLNXRGGRVVPPLL 1311
C G+ +++AR+SF S HA+ + + + R+ P+L
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVL 231
>ref|NP_055654.2| lipid phosphate phosphatase-related protein type 4 isoform 1 [Homo
sapiens].
Length = 763
Score = 62.8 bits (151), Expect = 7e-10
Identities = 54/200 (27%), Positives = 80/200 (40%), Gaps = 18/200 (9%)
Frame = +1
Query: 784 TSTIKPYHRGFYCNDETIKYPL--KTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKE 957
T KP H GF C D ++ P T E I GE +Y
Sbjct: 91 TDVFKPVHSGFSCYDRSLSMPYIEPTQEAIPFLMLLSLAFAGPAITIMVGEGI-LYCCLS 149
Query: 958 KSRSTIQ------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLS 1101
K R+ + N ++ + VG +FG + TDI ++S G P+FL+
Sbjct: 150 KRRNGVGLEPNINAGGCNFNSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLT 209
Query: 1102 VCNPDFSQINCS---EGYIQNYKCRGED-SKVQEARKSFFSGHASFXXXXXXXXXXXXPA 1269
VC P+++ +N S YI C G D + + RKSF S HA+ +
Sbjct: 210 VCKPNYTSLNVSCKENSYIVEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNS 269
Query: 1270 RLNXRGGRVVPPLLQFTLIM 1329
L +++ PLL FT I+
Sbjct: 270 TLTD-SSKLLKPLLVFTFII 288
>ref|NP_001159724.1| lipid phosphate phosphatase-related protein type 4 isoform 2 [Homo
sapiens].
Length = 705
Score = 59.3 bits (142), Expect = 8e-09
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Frame = +1
Query: 784 TSTIKPYHRGFYCNDETIKYPL--KTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKE 957
T KP H GF C D ++ P T E I GE +Y
Sbjct: 91 TDVFKPVHSGFSCYDRSLSMPYIEPTQEAIPFLMLLSLAFAGPAITIMVGEGI-LYCCLS 149
Query: 958 KSRSTIQ------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLS 1101
K R+ + N ++ + VG +FG + TDI ++S G P+FL+
Sbjct: 150 KRRNGVGLEPNINAGGCNFNSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLT 209
Query: 1102 VCNPDFSQINCS---EGYIQNYKCRGED-SKVQEARKSFFSGHAS 1224
VC P+++ +N S YI C G D + + RKSF S HA+
Sbjct: 210 VCKPNYTSLNVSCKENSYIVEDICSGSDLTVINSGRKSFPSQHAT 254
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 48,170,008
Number of extensions: 1257458
Number of successful extensions: 5476
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 5435
Number of HSP's successfully gapped: 13
Length of query: 444
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 338
Effective length of database: 14,802,980
Effective search space: 5003407240
Effective search space used: 5003407240
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012118
(1332 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 1068 0.0
>Sscrofa_Chr06
|| Length = 157765593
Score = 1068 bits (539), Expect = 0.0
Identities = 539/539 (100%)
Strand = Plus / Plus
Query: 219 aggaggaggaaagtaggagttggggcagcgctccgaggtggctgggctccgcgcagctcc 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642325 aggaggaggaaagtaggagttggggcagcgctccgaggtggctgggctccgcgcagctcc 143642384
Query: 279 cattcattaagcaaccagctgcggaggaaggtggccgagcgcccgcgctgccccctcgct 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642385 cattcattaagcaaccagctgcggaggaaggtggccgagcgcccgcgctgccccctcgct 143642444
Query: 339 gctttgcgcacggacacgccagctccgcgcgtccggagcaacgcagcgctgcagaagttt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642445 gctttgcgcacggacacgccagctccgcgcgtccggagcaacgcagcgctgcagaagttt 143642504
Query: 399 ctgctcgggagttgactctcttccccttggactttcgaacgattcggggttgagacagga 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642505 ctgctcgggagttgactctcttccccttggactttcgaacgattcggggttgagacagga 143642564
Query: 459 aaagcggaggagcaccagggagcagaaagcaccaccgcctgcccttggaagcggggcagc 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642565 aaagcggaggagcaccagggagcagaaagcaccaccgcctgcccttggaagcggggcagc 143642624
Query: 519 ggggccgcactctcccgccgcgccccgagaagcctcggtcgggaggcgaccccggcgtct 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642625 ggggccgcactctcccgccgcgccccgagaagcctcggtcgggaggcgaccccggcgtct 143642684
Query: 579 gggtgtgtggctgcagtcgtggggcgtcttggccagcgccatgcaaaactacaagtacga 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642685 gggtgtgtggctgcagtcgtggggcgtcttggccagcgccatgcaaaactacaagtacga 143642744
Query: 639 caaggctatcgtcgcggagagcaagaacggcggcagcccggcgctcaataacaacccgag 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642745 caaggctatcgtcgcggagagcaagaacggcggcagcccggcgctcaataacaacccgag 143642804
Query: 699 gaagggcggcagcaagcgggtgctgctcatctgcctggacctcttctgcctcttcatgg 757
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642805 gaagggcggcagcaagcgggtgctgctcatctgcctggacctcttctgcctcttcatgg 143642863
Score = 561 bits (283), Expect = e-157
Identities = 283/283 (100%)
Strand = Plus / Plus
Query: 915 gatcatcacgggggaattctaccgcatctattacctgaaggagaagtcccggtcgacaat 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706338 gatcatcacgggggaattctaccgcatctattacctgaaggagaagtcccggtcgacaat 143706397
Query: 975 ccagaatccctatgtggcagccctctataagcaagtgggctgcttcctcttcggctgtgc 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706398 ccagaatccctatgtggcagccctctataagcaagtgggctgcttcctcttcggctgtgc 143706457
Query: 1035 catcagccagtccttcacggacattgccaaggtctccatagggcgcctgcgtcctcactt 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706458 catcagccagtccttcacggacattgccaaggtctccatagggcgcctgcgtcctcactt 143706517
Query: 1095 cttgagcgtctgcaaccccgatttcagccagatcaactgctccgaaggctacatccaaaa 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706518 cttgagcgtctgcaaccccgatttcagccagatcaactgctccgaaggctacatccaaaa 143706577
Query: 1155 ctacaagtgtagaggcgaggacagcaaagtccaggaagccagg 1197
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706578 ctacaagtgtagaggcgaggacagcaaagtccaggaagccagg 143706620
Score = 315 bits (159), Expect = 3e-83
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 757 gcgggcctgcccttcatcatcatcgagacaagcaccatcaagccttaccaccggggtttt 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143689202 gcgggcctgcccttcatcatcatcgagacaagcaccatcaagccttaccaccggggtttt 143689261
Query: 817 tattgcaatgacgagaccatcaagtacccgctgaaaaccggggagacaatcaatgatgct 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143689262 tattgcaatgacgagaccatcaagtacccgctgaaaaccggggagacaatcaatgatgct 143689321
Query: 877 gtgctctgcgctgtgggcattgtgatcgccatcctcgcg 915
|||||||||||||||||||||||||||||||||||||||
Sbjct: 143689322 gtgctctgcgctgtgggcattgtgatcgccatcctcgcg 143689360
Score = 293 bits (148), Expect = 1e-76
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 10 aattatcctacgtcttaggctgcttaaggaaggggctgtgctttcggaatcccttctgag 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642116 aattatcctacgtcttaggctgcttaaggaaggggctgtgctttcggaatcccttctgag 143642175
Query: 70 ccaagtaaggaggtccctctctttgcctctctctcttttttaaaggacctcatgaaataa 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642176 ccaagtaaggaggtccctctctttgcctctctctcttttttaaaggacctcatgaaataa 143642235
Query: 130 aagtgccgaaaacaaacccaggcgatca 157
||||||||||||||||||||||||||||
Sbjct: 143642236 aagtgccgaaaacaaacccaggcgatca 143642263
Score = 97.6 bits (49), Expect = 2e-17
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1194 caggaagtccttcttctctgggcatgcctccttcctcatgtacactatgctgtatctgat 1253
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 143707033 caggaagtccttcttctctggccatgcctccttctccatgtacactatgctgtatctgat 143707092
Query: 1254 g 1254
|
Sbjct: 143707093 g 143707093
Score = 63.9 bits (32), Expect = 2e-07
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 1254 gctgtacctgccagcccgcctcaattgncgaggtggccgggtggttccgcccctcctgca 1313
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Sbjct: 143717085 gctgtacctgcaggcccgcttcacttggcgaggtgcccggctgctccggccgctcctgca 143717144
Query: 1314 attcaccctgatcatgatg 1332
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Sbjct: 143717145 gttcaccctgatcatgatg 143717163
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 31,909,700
Number of extensions: 433
Number of successful extensions: 433
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 433
Number of HSP's successfully gapped: 6
Length of query: 1332
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1311
Effective length of database: 2,808,413,156
Effective search space: 3681829647516
Effective search space used: 3681829647516
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)