Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012123
(1503 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536696.2| PREDICTED: similar to phosphatidic acid phospha... 512 e-145
Alignment gi|XP_855263.1| PREDICTED: similar to phosphatidic acid phospha... 209 7e-54
Alignment gi|XP_849687.1| PREDICTED: similar to phosphatidic acid phospha... 202 9e-52
Alignment gi|XP_538755.2| PREDICTED: similar to plasticity related gene 3... 100 6e-21
Alignment gi|XP_867229.1| PREDICTED: similar to plasticity related gene 3... 97 5e-20
Alignment gi|XP_537060.2| PREDICTED: similar to plasticity-related protei... 93 6e-19
Alignment gi|XP_547267.2| PREDICTED: similar to plasticity related gene 1... 86 1e-16
Alignment gi|XP_542060.2| PREDICTED: similar to lipid phosphate phosphata... 83 8e-16
Alignment gi|XP_867242.1| PREDICTED: similar to plasticity related gene 3... 81 2e-15
Alignment gi|XP_867252.1| PREDICTED: similar to plasticity related gene 3... 78 2e-14
>ref|XP_536696.2| PREDICTED: similar to phosphatidic acid phosphatase type 2B [Canis
familiaris].
Length = 312
Score = 512 bits (1318), Expect = e-145
Identities = 252/293 (86%), Positives = 257/293 (87%)
Frame = +3
Query: 624 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 803
MQNYKYDKAI ESK GGSPALNNNPRKGGSKR+LLICLDLFCLFMAGLPF+IIETSTIK
Sbjct: 1 MQNYKYDKAIAPESKTGGSPALNNNPRKGGSKRMLLICLDLFCLFMAGLPFLIIETSTIK 60
Query: 804 PYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ 983
PYHRGFYCNDE+IKYPLK GETIND TGEFYRIYYLKEKSRSTIQ
Sbjct: 61 PYHRGFYCNDESIKYPLKIGETINDAVLCAVGIVIAILAIITGEFYRIYYLKEKSRSTIQ 120
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 1163
NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFL+VCNPDFSQINCSEGYIQNY
Sbjct: 121 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLNVCNPDFSQINCSEGYIQNY 180
Query: 1164 KCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMMAF 1343
KCRG+DSKVQEARKSFFSGHASFS QARFTWRGARLLRPLLQFTLIMMAF
Sbjct: 181 KCRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMMAF 240
Query: 1344 YTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKTKTTLSLAPSGIR 1502
YTGLSRVSDHKHHPSDVLAGFA GALV CCIVFFVSDLFKTKTTLSL P IR
Sbjct: 241 YTGLSRVSDHKHHPSDVLAGFAQGALVACCIVFFVSDLFKTKTTLSLPPPAIR 293
>ref|XP_855263.1| PREDICTED: similar to phosphatidic acid phosphatase type 2C isoform 3
[Canis familiaris].
Length = 379
Score = 209 bits (531), Expect = 7e-54
Identities = 117/237 (49%), Positives = 147/237 (62%), Gaps = 1/237 (0%)
Frame = +3
Query: 762 AGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFY 941
A LPF I+ T PY RGFYC D++I+YP + +TI GE Y
Sbjct: 109 ASLPFAIL-TLVNAPYKRGFYCADDSIRYPYRP-DTITHGLMAGVTITATVVLVSAGEAY 166
Query: 942 RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD 1121
+Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK IGRLRP+FL+VC+PD
Sbjct: 167 LVYTDRLYSRSDFNN-YVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPD 225
Query: 1122 FSQINCSEGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGAR 1298
+S++NCS Y+Q K CRG + V E+R SF+SGH+SF QAR W+ AR
Sbjct: 226 WSRVNCSL-YVQVEKVCRGSPANVTESRLSFYSGHSSFGMYCMMFLALYVQARLCWKWAR 284
Query: 1299 LLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKTK 1469
LLRP +QF L+ A Y G +RVSDHKHH SDVL G GALV V +VSD FK++
Sbjct: 285 LLRPTVQFFLLAFALYVGYTRVSDHKHHWSDVLVGLLQGALVAGLTVRYVSDFFKSR 341
>ref|XP_849687.1| PREDICTED: similar to phosphatidic acid phosphatase type 2A isoform 1
isoform 1 [Canis familiaris].
Length = 215
Score = 202 bits (513), Expect = 9e-52
Identities = 101/182 (55%), Positives = 123/182 (67%)
Frame = +3
Query: 930 GEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSV 1109
GE +YY S S I+N Y+A +YK +G FLFG A SQS TDIAK SIGRLRPHFL V
Sbjct: 4 GEALSVYYNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSIGRLRPHFLDV 63
Query: 1110 CNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWR 1289
C+PD+S+INCS GY++NY C+G KV+E R SF+SGH+SFS QAR
Sbjct: 64 CDPDWSKINCSVGYVENYICQGNAQKVREGRLSFYSGHSSFSMYCMLFVALYLQARMKGD 123
Query: 1290 GARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKTK 1469
ARLLRP LQF L+ ++ Y GLSRVSD+KHH SDVL G GAL +V +VSD FK +
Sbjct: 124 WARLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALAAILVVVYVSDFFKER 183
Query: 1470 TT 1475
+
Sbjct: 184 NS 185
>ref|XP_538755.2| PREDICTED: similar to plasticity related gene 3 isoform 1 [Canis
familiaris].
Length = 325
Score = 99.8 bits (247), Expect = 6e-21
Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Frame = +3
Query: 684 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 854
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSHSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 855 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 986
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 987 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1160
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSTDCRAHHQFINN 178
Query: 1161 YK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMM 1337
C G+ +++AR+SF S HA+ S + + +RL +P+L +
Sbjct: 179 GNICTGDMEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
Query: 1338 AFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
AF TGL+RVS++++H SDV+AGF G V + V FK
Sbjct: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 280
>ref|XP_867229.1| PREDICTED: similar to plasticity related gene 3 isoform 2 [Canis
familiaris].
Length = 309
Score = 96.7 bits (239), Expect = 5e-20
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 19/244 (7%)
Frame = +3
Query: 789 TSTIKPYHRGFYCNDETIKYPLKTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLK 959
T T + + +GF+C D + P E I GE +Y++K
Sbjct: 22 TDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIK 80
Query: 960 EKSRSTIQ-------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHF 1100
S I NP + + + +G F FG + F + +V G L P+F
Sbjct: 81 STRESLIAQEKTILTGECCYLNPLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYF 140
Query: 1101 LSVCNPDFSQINCS--EGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQ 1271
L+VC P+++ +C +I N C G+ +++AR+SF S HA+ S
Sbjct: 141 LTVCKPNYTSTDCRAHHQFINNGNICTGDMEVIEKARRSFPSKHAALSIYSALYATMYIT 200
Query: 1272 ARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVS 1451
+ + +RL +P+L + AF TGL+RVS++++H SDV+AGF G V + V
Sbjct: 201 STIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVV 260
Query: 1452 DLFK 1463
FK
Sbjct: 261 HNFK 264
>ref|XP_537060.2| PREDICTED: similar to plasticity-related protein 3 [Canis
familiaris].
Length = 252
Score = 93.2 bits (230), Expect = 6e-19
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQ-- 1157
NP V + +G + FG + F + +V G L PHFL++C P+++ + C + Y Q
Sbjct: 44 NPLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQ-YTQFI 102
Query: 1158 --NYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G + ARK+F S A+ S +G RL +P+L L+
Sbjct: 103 SGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLM 162
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
+AF TGL+RV+++++H SDV+AGF G + +V V + FK
Sbjct: 163 CLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFK 206
>ref|XP_547267.2| PREDICTED: similar to plasticity related gene 1 [Canis familiaris].
Length = 714
Score = 85.5 bits (210), Expect = 1e-16
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS---EGYI 1154
N ++ + VG +FG + TDI ++S G P+FL+VC P+++ +N S YI
Sbjct: 120 NSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKENSYI 179
Query: 1155 QNYKCRGED-SKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G D + + RKSF S HA+ + + T ++LL+PLL FT I
Sbjct: 180 VEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNSTLT-DSSKLLKPLLVFTFI 238
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPG 1415
+ GL+R++ +K+HP DV GF G
Sbjct: 239 ICGIICGLTRITQYKNHPVDVYCGFLIG 266
>ref|XP_542060.2| PREDICTED: similar to lipid phosphate phosphatase-related protein
type 2 [Canis familiaris].
Length = 452
Score = 82.8 bits (203), Expect = 8e-16
Identities = 71/264 (26%), Positives = 111/264 (42%), Gaps = 26/264 (9%)
Frame = +3
Query: 789 TSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXT---GEFYRIYYLK 959
T T + +GF+C D T P E + T GE R +
Sbjct: 39 TDTFPVHTQGFFCYDSTYAKPYPGPEAASRVPPALIYALVTAGPTLTILLGELARAFSPA 98
Query: 960 EKS------RSTIQN-------PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHF 1100
S STI + P + L + +G + FG + F + +V G PHF
Sbjct: 99 PPSAIPIIGESTIVSGACCRFSPPLRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHF 158
Query: 1101 LSVCNPDFSQINCS---------EGYIQNY-KCRGEDSKVQEARKSFFSGHASFSXXXXX 1250
LSVC P+++ + C + ++ + C G S V AR++F A+
Sbjct: 159 LSVCRPNYTALGCPPPSPDRPGPDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVT 218
Query: 1251 XXXXXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTC 1430
F +G+RL++P L L+ AF G+ RV+++++H SDVLAGF GA +
Sbjct: 219 YTAMYVTLVFRVKGSRLVKPSLCLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIAT 278
Query: 1431 CIVFFVSDLFKTKTTLSLAPSGIR 1502
+V V F+++ PSG R
Sbjct: 279 FLVTCVVHNFQSR-----RPSGRR 297
>ref|XP_867242.1| PREDICTED: similar to plasticity related gene 3 isoform 3 [Canis
familiaris].
Length = 288
Score = 81.3 bits (199), Expect = 2e-15
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 8/233 (3%)
Frame = +3
Query: 789 TSTIKPYHRGFYCNDETIKYPLKTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLK 959
T T + + +GF+C D + P E I GE +Y++K
Sbjct: 22 TDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIK 80
Query: 960 EKSRSTIQNPYVAALYKQVGCFLFG--CAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQI 1133
S I Q L G C ++ I + IG L P+FL+VC P+++
Sbjct: 81 STRESLIA---------QEKTILTGECCYLNPLLRRIIRF-IGHLTPYFLTVCKPNYTST 130
Query: 1134 NCS--EGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLL 1304
+C +I N C G+ +++AR+SF S HA+ S + + +RL
Sbjct: 131 DCRAHHQFINNGNICTGDMEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLA 190
Query: 1305 RPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
+P+L + AF TGL+RVS++++H SDV+AGF G V + V FK
Sbjct: 191 KPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 243
>ref|XP_867252.1| PREDICTED: similar to plasticity related gene 3 isoform 4 [Canis
familiaris].
Length = 333
Score = 78.2 bits (191), Expect = 2e-14
Identities = 71/276 (25%), Positives = 112/276 (40%), Gaps = 51/276 (18%)
Frame = +3
Query: 789 TSTIKPYHRGFYCNDETIKYPLKTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLK 959
T T + + +GF+C D + P E I GE +Y++K
Sbjct: 14 TDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIK 72
Query: 960 EKSRSTIQ-------------NPYVAALYKQVG-------CFLFGCAISQSFTDIAKVSI 1079
S I NP + + + +G F FG + F + +V
Sbjct: 73 STRESLIAQEKTILTGECCYLNPLLRRIIRFIGDLEETMRVFAFGLFATDIFVNAGQVVT 132
Query: 1080 GRLRPHFLSVCNPDFSQINC--SEGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXX 1250
G L P+FL+VC P+++ +C +I N C G+ +++AR+SF S HA+ S
Sbjct: 133 GHLTPYFLTVCKPNYTSTDCRAHHQFINNGNICTGDMEVIEKARRSFPSKHAALSIYSAL 192
Query: 1251 XXXXXXQAR-FTWRG------------------------ARLLRPLLQFTLIMMAFYTGL 1355
++ F RG +RL +P+L + AF TGL
Sbjct: 193 YATVSRSSQSFGCRGPAACHSVVSVLFQMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGL 252
Query: 1356 SRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
+RVS++++H SDV+AGF G V + V FK
Sbjct: 253 NRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 288
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 55,879,086
Number of extensions: 1471455
Number of successful extensions: 6363
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 6328
Number of HSP's successfully gapped: 13
Length of query: 501
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 394
Effective length of database: 15,307,552
Effective search space: 6031175488
Effective search space used: 6031175488
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-012123
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012123
(1503 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069941.1| lipid phosphate phosphohydrolase 3 [Bos taur... 519 e-147
Alignment gi|NP_001073798.1| lipid phosphate phosphohydrolase 1 [Bos taur... 245 9e-65
Alignment gi|NP_001039355.1| lipid phosphate phosphohydrolase 2 [Bos taur... 221 2e-57
Alignment gi|XP_002688955.1| PREDICTED: phosphatidic acid phosphatase typ... 180 3e-45
Alignment gi|XP_001789251.2| PREDICTED: phosphatidic acid phosphatase typ... 180 3e-45
Alignment gi|NP_001179332.1| lipid phosphate phosphatase-related protein ... 99 1e-20
Alignment gi|XP_002689915.1| PREDICTED: lipid phosphate phosphatase-relat... 99 1e-20
Alignment gi|NP_001039713.1| lipid phosphate phosphatase-related protein ... 82 2e-15
Alignment gi|XP_002698781.1| PREDICTED: phosphatidic acid phosphatase typ... 64 4e-10
Alignment gi|XP_873426.1| PREDICTED: phosphatidic acid phosphatase type 2... 64 4e-10
>ref|NP_001069941.1| lipid phosphate phosphohydrolase 3 [Bos taurus].
Length = 311
Score = 519 bits (1336), Expect = e-147
Identities = 257/293 (87%), Positives = 260/293 (88%)
Frame = +3
Query: 624 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 803
MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK
Sbjct: 1 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 60
Query: 804 PYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ 983
PYHRGFYCNDE+IKYP KTGETIND TGEFYRIYYLKEKSRSTIQ
Sbjct: 61 PYHRGFYCNDESIKYPQKTGETINDAVLTAVGIVIAILAIITGEFYRIYYLKEKSRSTIQ 120
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 1163
NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFL+VCNPDFSQINCS GYIQNY
Sbjct: 121 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLNVCNPDFSQINCSVGYIQNY 180
Query: 1164 KCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMMAF 1343
+CRGEDSKVQEARKSFFSGHASFS QARFTWRGARLLRPLLQFTLIMMAF
Sbjct: 181 RCRGEDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMMAF 240
Query: 1344 YTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKTKTTLSLAPSGIR 1502
YTGLSRVSDHKHHPSDVLAGFA GALV CCIVFFVSDLFKTKTTLSL PS IR
Sbjct: 241 YTGLSRVSDHKHHPSDVLAGFAQGALVACCIVFFVSDLFKTKTTLSLPPSAIR 293
>ref|NP_001073798.1| lipid phosphate phosphohydrolase 1 [Bos taurus].
Length = 285
Score = 245 bits (625), Expect = 9e-65
Identities = 128/252 (50%), Positives = 160/252 (63%)
Frame = +3
Query: 720 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 899
R+ + LD+ C+ +AGLPF I+ TS P+ RG +CNDE+IKYP K +TI
Sbjct: 6 RLPYVALDVLCVLLAGLPFAIL-TSRHTPFQRGLFCNDESIKYPYKE-DTIPYPLLGGII 63
Query: 900 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1079
GE +Y+ S S I+N Y+A +YK +G FLFG A SQS TDIAK SI
Sbjct: 64 IPFSIIVMIVGETLSVYFSLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSI 123
Query: 1080 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXX 1259
GRLRPHFL VC+PD+S+INCS+GYI+NY CRG KV+E R SF+SGH+SFS
Sbjct: 124 GRLRPHFLDVCDPDWSKINCSDGYIENYICRGNAQKVKEGRLSFYSGHSSFSMYCMMFVA 183
Query: 1260 XXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIV 1439
QAR ARLLRP LQF L+ + Y GLSRVSD+KHH SDVL G GALV +
Sbjct: 184 LYLQARMKGDWARLLRPTLQFGLVAASIYVGLSRVSDYKHHWSDVLTGLIQGALVAILVA 243
Query: 1440 FFVSDLFKTKTT 1475
+VSD FK +++
Sbjct: 244 VYVSDFFKKRSS 255
>ref|NP_001039355.1| lipid phosphate phosphohydrolase 2 [Bos taurus].
Length = 287
Score = 221 bits (562), Expect = 2e-57
Identities = 118/251 (47%), Positives = 153/251 (60%)
Frame = +3
Query: 717 KRVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXX 896
+R + + LD+ C+ +A LP I+ T PY RGFYC D++I+YP + +TI
Sbjct: 3 RRWVFVLLDVLCVLVAALPCAIL-TFVNTPYKRGFYCGDDSIRYPYRP-DTITHGLMAGV 60
Query: 897 XXXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVS 1076
GE Y +Y + SRS N Y+AALYK VG FLFG A+SQS TD+AK
Sbjct: 61 IITATVILVSAGEAYLVYTDRLYSRSDFNN-YLAALYKVVGTFLFGAAVSQSLTDLAKYM 119
Query: 1077 IGRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXX 1256
GRLRP+FL+VC+PD+S++NCS Y+Q CRG + V E+R SF+SGH+SF
Sbjct: 120 TGRLRPNFLAVCDPDWSRVNCS-AYVQVEVCRGSSANVTESRLSFYSGHSSFGMYCMVFL 178
Query: 1257 XXXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCI 1436
QAR W+ ARLLRP +QF L+ A Y G +RVSDHKHH SDVL G GALV
Sbjct: 179 ALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDHKHHWSDVLVGLLQGALVASLT 238
Query: 1437 VFFVSDLFKTK 1469
V ++SD FK +
Sbjct: 239 VRYISDFFKAR 249
>ref|XP_002688955.1| PREDICTED: phosphatidic acid phosphatase type 2B-like [Bos taurus].
Length = 427
Score = 180 bits (456), Expect = 3e-45
Identities = 95/251 (37%), Positives = 133/251 (52%)
Frame = +3
Query: 726 LLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXX 905
LL+ LDL CL + LP ++ ET ++P+ +GF+CND TI+YP I D
Sbjct: 150 LLVALDLICLMLVSLPIVLSETGLLEPHIQGFFCNDTTIQYPRMAHYIIEDSALIKMGFF 209
Query: 906 XXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGR 1085
GE R+ L+ S + + + Y+A +YKQ+ F+FG S S T IAK++ G+
Sbjct: 210 ISIFTISLGELIRVRGLQLSSPAFMSSAYMAMIYKQLRAFIFGGLASFSLTSIAKMTTGQ 269
Query: 1086 LRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXX 1265
LRPHFL+ C PD + NC GYI NY C G V +AR SF+S +AS
Sbjct: 270 LRPHFLATCLPDPTSFNCENGYITNYSCTGHPEDVLDARMSFYSENASLGMYCMVYLVLY 329
Query: 1266 XQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFF 1445
QA + LL P +Q + +A TG RV DH HHP D GF GAL +VF+
Sbjct: 330 IQAGSWGQKIWLLGPTIQLLFLSLALLTGYIRVLDHWHHPYDAFFGFLQGALTAFWVVFY 389
Query: 1446 VSDLFKTKTTL 1478
++ K+++ L
Sbjct: 390 IAGNAKSQSHL 400
>ref|XP_001789251.2| PREDICTED: phosphatidic acid phosphatase type 2B-like [Bos taurus].
Length = 427
Score = 180 bits (456), Expect = 3e-45
Identities = 95/251 (37%), Positives = 133/251 (52%)
Frame = +3
Query: 726 LLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXX 905
LL+ LDL CL + LP ++ ET ++P+ +GF+CND TI+YP I D
Sbjct: 150 LLVALDLICLMLVSLPIVLSETGLLEPHIQGFFCNDTTIQYPRMAHYIIEDSALIKMGFF 209
Query: 906 XXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGR 1085
GE R+ L+ S + + + Y+A +YKQ+ F+FG S S T IAK++ G+
Sbjct: 210 ISIFTISLGELIRVRGLQLSSPAFMSSAYMAMIYKQLRAFIFGGLASFSLTSIAKMTTGQ 269
Query: 1086 LRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXX 1265
LRPHFL+ C PD + NC GYI NY C G V +AR SF+S +AS
Sbjct: 270 LRPHFLATCLPDPTSFNCENGYITNYSCTGHPEDVLDARMSFYSENASLGMYCMVYLVLY 329
Query: 1266 XQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFF 1445
QA + LL P +Q + +A TG RV DH HHP D GF GAL +VF+
Sbjct: 330 IQAGSWGQKIWLLGPTIQLLFLSLALLTGYIRVLDHWHHPYDAFFGFLQGALTAFWVVFY 389
Query: 1446 VSDLFKTKTTL 1478
++ K+++ L
Sbjct: 390 IAGNAKSQSHL 400
>ref|NP_001179332.1| lipid phosphate phosphatase-related protein type 1 [Bos taurus].
Length = 325
Score = 99.0 bits (245), Expect = 1e-20
Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Frame = +3
Query: 684 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 854
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 855 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 986
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLLLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 987 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1160
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSTDCRAHHQFINN 178
Query: 1161 YK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMM 1337
C G+ +++AR+SF S HA+ S + + +RL +P+L +
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
Query: 1338 AFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
AF TGL+RVS++++H SDV+AGF G V + V FK
Sbjct: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 280
>ref|XP_002689915.1| PREDICTED: lipid phosphate phosphatase-related protein type 1-like
[Bos taurus].
Length = 325
Score = 99.0 bits (245), Expect = 1e-20
Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Frame = +3
Query: 684 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 854
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 855 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 986
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLLLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 987 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1160
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSTDCRAHHQFINN 178
Query: 1161 YK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMM 1337
C G+ +++AR+SF S HA+ S + + +RL +P+L +
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
Query: 1338 AFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
AF TGL+RVS++++H SDV+AGF G V + V FK
Sbjct: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 280
>ref|NP_001039713.1| lipid phosphate phosphatase-related protein type 2 [Bos taurus].
Length = 389
Score = 81.6 bits (200), Expect = 2e-15
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS------- 1142
+P + L + +G + FG + F + +V G PHFLSVC P+++ + C
Sbjct: 57 SPPLRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCPPPSPDRP 116
Query: 1143 --EGYIQNY-KCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPL 1313
+ ++ + C G S V AR++F A+ F +G+RL++P
Sbjct: 117 GPDRFVNDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPS 176
Query: 1314 LQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKTKTTLSLAPS 1493
L L+ AF G+ RV+++++H SDVLAGF GA + +V V F+++ PS
Sbjct: 177 LCLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSR-----PPS 231
Query: 1494 GIR 1502
G R
Sbjct: 232 GRR 234
>ref|XP_002698781.1| PREDICTED: phosphatidic acid phosphatase type 2 domain containing 1B
isoform 1 [Bos taurus].
Length = 264
Score = 63.9 bits (154), Expect = 4e-10
Identities = 47/136 (34%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Frame = +3
Query: 1038 AISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFS 1217
A++ FT+ K+ +GR RP F C PD + C G+ + V E RKSF S
Sbjct: 97 ALNGIFTNTIKLIVGRPRPDFFYRCFPDGQAHG-------DLMCTGDKAVVNEGRKSFPS 149
Query: 1218 GHASFSXXXXXXXXXXXQARF----------TWRGARLLRPLLQFTLIMMAFYTGLSRVS 1367
GHASF+ + +WR L PLL A LSR
Sbjct: 150 GHASFAFAGLAFASFYLAGKLHCFTPRGRGKSWRFCSFLSPLL------FAAVIALSRTC 203
Query: 1368 DHKHHPSDVLAGFAPG 1415
D+KHH DVLAG A G
Sbjct: 204 DYKHHWQDVLAGSAIG 219
>ref|XP_873426.1| PREDICTED: phosphatidic acid phosphatase type 2 domain containing 1B
isoform 3 [Bos taurus].
Length = 264
Score = 63.9 bits (154), Expect = 4e-10
Identities = 47/136 (34%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Frame = +3
Query: 1038 AISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFS 1217
A++ FT+ K+ +GR RP F C PD + C G+ + V E RKSF S
Sbjct: 97 ALNGIFTNTIKLIVGRPRPDFFYRCFPDGQAHG-------DLMCTGDKAVVNEGRKSFPS 149
Query: 1218 GHASFSXXXXXXXXXXXQARF----------TWRGARLLRPLLQFTLIMMAFYTGLSRVS 1367
GHASF+ + +WR L PLL A LSR
Sbjct: 150 GHASFAFAGLAFASFYLAGKLHCFTPRGRGKSWRFCSFLSPLL------FAAVIALSRTC 203
Query: 1368 DHKHHPSDVLAGFAPG 1415
D+KHH DVLAG A G
Sbjct: 204 DYKHHWQDVLAGSAIG 219
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 53,797,749
Number of extensions: 1486022
Number of successful extensions: 6084
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 6038
Number of HSP's successfully gapped: 14
Length of query: 501
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 395
Effective length of database: 14,174,046
Effective search space: 5598748170
Effective search space used: 5598748170
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012123
(1503 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003128019.2| PREDICTED: lipid phosphate phosphohydrolase ... 290 1e-78
Alignment gi|NP_001137195.1| lipid phosphate phosphohydrolase 2 [Sus scro... 221 8e-58
Alignment gi|XP_003133999.2| PREDICTED: lipid phosphate phosphohydrolase ... 197 1e-50
Alignment gi|XP_003356494.1| PREDICTED: hypothetical protein LOC100627535... 153 3e-37
Alignment gi|XP_003356495.1| PREDICTED: lipid phosphate phosphohydrolase ... 151 8e-37
Alignment gi|XP_001928256.1| PREDICTED: lipid phosphate phosphatase-relat... 99 6e-21
Alignment gi|XP_003353643.1| PREDICTED: lipid phosphate phosphatase-relat... 96 4e-20
Alignment gi|XP_003125945.2| PREDICTED: lipid phosphate phosphatase-relat... 93 3e-19
Alignment gi|XP_003355334.1| PREDICTED: lipid phosphate phosphatase-relat... 86 7e-17
Alignment gi|XP_003123220.1| PREDICTED: lipid phosphate phosphatase-relat... 82 1e-15
>ref|XP_003128019.2| PREDICTED: lipid phosphate phosphohydrolase 3-like [Sus scrofa].
Length = 294
Score = 290 bits (742), Expect = 1e-78
Identities = 141/158 (89%), Positives = 142/158 (89%)
Frame = +3
Query: 762 AGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFY 941
+GLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETIND TGEFY
Sbjct: 89 SGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDAVLCAVGIVIAILAIITGEFY 148
Query: 942 RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD 1121
RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD
Sbjct: 149 RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD 208
Query: 1122 FSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFS 1235
FSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFS
Sbjct: 209 FSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFS 246
>ref|NP_001137195.1| lipid phosphate phosphohydrolase 2 [Sus scrofa].
Length = 287
Score = 221 bits (563), Expect = 8e-58
Identities = 118/251 (47%), Positives = 154/251 (61%)
Frame = +3
Query: 717 KRVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXX 896
+R + + LD+ C+ +A LPF I+ T PY RGFYC D++I+YP + +TI
Sbjct: 3 RRWVFVLLDVLCVLVASLPFTIL-TFVNAPYKRGFYCGDDSIRYPYRP-DTITHGLMAGV 60
Query: 897 XXXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVS 1076
GE Y +Y + SRS N Y+AALYK +G FLFG A+SQS TD+AK
Sbjct: 61 IITATVILVSAGEAYLVYTDRLYSRSDFNN-YLAALYKVLGTFLFGAAVSQSLTDLAKYM 119
Query: 1077 IGRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXX 1256
GRLRP+FL+VC+PD+S++NCS Y+Q CRG + V E+R SF+SGH+SF
Sbjct: 120 TGRLRPNFLAVCDPDWSRVNCSV-YVQVDVCRGSPANVTESRLSFYSGHSSFGMYCMVFL 178
Query: 1257 XXXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCI 1436
QAR W+ ARLLRP +QF L+ A Y G +RVSDHKHH SDVL G GALV
Sbjct: 179 ALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDHKHHWSDVLVGLLQGALVASLT 238
Query: 1437 VFFVSDLFKTK 1469
V ++SD FK +
Sbjct: 239 VRYISDFFKVR 249
>ref|XP_003133999.2| PREDICTED: lipid phosphate phosphohydrolase 1-like [Sus scrofa].
Length = 252
Score = 197 bits (501), Expect = 1e-50
Identities = 111/252 (44%), Positives = 139/252 (55%)
Frame = +3
Query: 720 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 899
R+ + LD+ C+ +AGLPF I+ TS P+ RG +CNDE+IKYP K +TI
Sbjct: 6 RLPYVALDVLCVLLAGLPFAIL-TSRHTPFQRGLFCNDESIKYPYKE-DTIPYPLLGGII 63
Query: 900 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1079
GE +Y+ TDIAK SI
Sbjct: 64 IPFSIIVMIVGETLSVYFX---------------------------------TDIAKYSI 90
Query: 1080 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXX 1259
GRLRPHFL VC+PD+S+INCS+GYI+NY CRG KV+E R SF+SGH+SFS
Sbjct: 91 GRLRPHFLDVCDPDWSKINCSDGYIENYICRGNAQKVKEGRLSFYSGHSSFSMYCMLFVA 150
Query: 1260 XXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIV 1439
QAR ARLLRP LQF L+ ++ Y GLSRVSD+KHH SDVL G GALV +
Sbjct: 151 LYLQARMKGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVAIVVA 210
Query: 1440 FFVSDLFKTKTT 1475
+VSD FK + +
Sbjct: 211 VYVSDFFKERNS 222
>ref|XP_003356494.1| PREDICTED: hypothetical protein LOC100627535 [Sus scrofa].
Length = 189
Score = 153 bits (386), Expect = 3e-37
Identities = 81/110 (73%), Positives = 81/110 (73%)
Frame = +1
Query: 124 AENKPRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSWGSAPRWLGSAQLPFIKQPA 303
AENKPRRS SRSWGSAPRWLGSAQLPFIKQPA
Sbjct: 85 AENKPRRSQRRRRRRQQQQQQQQQQQQQEEEE-----SRSWGSAPRWLGSAQLPFIKQPA 139
Query: 304 AEEGGRAPALPPRCFAHGHASSARPEQRSAAEVSARELTLFPLDFRTIRG 453
AEEGGRAPALPPRCFAHGHASSARPEQRSAAEVSARELTLFPLDFRTIRG
Sbjct: 140 AEEGGRAPALPPRCFAHGHASSARPEQRSAAEVSARELTLFPLDFRTIRG 189
>ref|XP_003356495.1| PREDICTED: lipid phosphate phosphohydrolase 3-like [Sus scrofa].
Length = 186
Score = 151 bits (382), Expect = 8e-37
Identities = 74/78 (94%), Positives = 74/78 (94%)
Frame = +3
Query: 1269 QARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFV 1448
QARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFA GALV CCIVFFV
Sbjct: 90 QARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAQGALVACCIVFFV 149
Query: 1449 SDLFKTKTTLSLAPSGIR 1502
SDLFKTKTTLSL PS IR
Sbjct: 150 SDLFKTKTTLSLPPSAIR 167
>ref|XP_001928256.1| PREDICTED: lipid phosphate phosphatase-related protein type 1-like
isoform 1 [Sus scrofa].
Length = 325
Score = 99.0 bits (245), Expect = 6e-21
Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Frame = +3
Query: 684 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 854
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 855 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 986
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 987 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1160
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCRAHHQFINN 178
Query: 1161 YK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMM 1337
C G+ +++AR+SF S HA+ S + + +RL +P+L +
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
Query: 1338 AFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
AF TGL+RVS++++H SDV+AGF G V + V FK
Sbjct: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 280
>ref|XP_003353643.1| PREDICTED: lipid phosphate phosphatase-related protein type 1-like
isoform 2 [Sus scrofa].
Length = 301
Score = 96.3 bits (238), Expect = 4e-20
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 19/244 (7%)
Frame = +3
Query: 789 TSTIKPYHRGFYCNDETIKYPLKTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLK 959
T T + + +GF+C D + P E I GE +Y++K
Sbjct: 14 TDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIK 72
Query: 960 EKSRSTIQ-------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHF 1100
S I NP + + + +G F FG + F + +V G L P+F
Sbjct: 73 STRESLIAQEKTILTGECCYLNPLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYF 132
Query: 1101 LSVCNPDFSQINCS--EGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQ 1271
L+VC P+++ +C +I N C G+ +++AR+SF S HA+ S
Sbjct: 133 LTVCKPNYTSADCRAHHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYIT 192
Query: 1272 ARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVS 1451
+ + +RL +P+L + AF TGL+RVS++++H SDV+AGF G V + V
Sbjct: 193 STIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVV 252
Query: 1452 DLFK 1463
FK
Sbjct: 253 HNFK 256
>ref|XP_003125945.2| PREDICTED: lipid phosphate phosphatase-related protein type 5-like
[Sus scrofa].
Length = 256
Score = 93.2 bits (230), Expect = 3e-19
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQ-- 1157
NP V + +G + FG + F + +V G L PHFL++C P+++ + C + Y Q
Sbjct: 53 NPLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQ-YTQFI 111
Query: 1158 --NYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G + ARK+F S A+ S +G RL +P+L L+
Sbjct: 112 SGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLM 171
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
+AF TGL+RV+++++H SDV+AGF G + +V V + FK
Sbjct: 172 CLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFK 215
>ref|XP_003355334.1| PREDICTED: lipid phosphate phosphatase-related protein type 4-like
[Sus scrofa].
Length = 639
Score = 85.5 bits (210), Expect = 7e-17
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS---EGYI 1154
N ++ + VG +FG + TDI ++S G P+FL+VC P+++ +N S YI
Sbjct: 45 NSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKENSYI 104
Query: 1155 QNYKCRGED-SKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G D + + RKSF S HA+ + + T ++LL+PLL FT I
Sbjct: 105 VEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNSTLT-DSSKLLKPLLVFTFI 163
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPG 1415
+ GL+R++ +K+HP DV GF G
Sbjct: 164 ICGIICGLTRITQYKNHPVDVYCGFLIG 191
>ref|XP_003123220.1| PREDICTED: lipid phosphate phosphatase-related protein type 2-like
[Sus scrofa].
Length = 427
Score = 81.6 bits (200), Expect = 1e-15
Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Frame = +3
Query: 816 GFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXT---GEFYRIYYLKEKS------ 968
GF+C D T P E + T GE R ++ S
Sbjct: 23 GFFCYDSTYAKPYPGPEATSRAPPALIYALVTAGPTLTILLGELARAFFPAPPSAIPITG 82
Query: 969 RSTIQN-------PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFS 1127
STI + P + L + +G + FG + F + +V G PHFLSVC P+++
Sbjct: 83 ESTIVSGACCRFSPPLRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYT 142
Query: 1128 QINCS---------EGYIQNY-KCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQAR 1277
+ C + ++ + C G S V AR++F A+
Sbjct: 143 ALGCPPPSPDRPGPDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLV 202
Query: 1278 FTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDL 1457
F +G+RL++P L L+ AF G+ RV+++++H SDVLAGF GA + +V V
Sbjct: 203 FRVKGSRLVKPSLCLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHN 262
Query: 1458 FKTKTTLSLAPSGIR 1502
F+++ PSG R
Sbjct: 263 FQSR-----PPSGRR 272
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 35,331,718
Number of extensions: 1057955
Number of successful extensions: 3897
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 3870
Number of HSP's successfully gapped: 12
Length of query: 501
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 398
Effective length of database: 8,779,541
Effective search space: 3494257318
Effective search space used: 3494257318
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012123
(1503 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_542122.1| lipid phosphate phosphohydrolase 3 [Mus musculu... 497 e-141
Alignment gi|NP_032929.1| lipid phosphate phosphohydrolase 1 isoform 2 [M... 237 2e-62
Alignment gi|NP_056632.2| lipid phosphate phosphohydrolase 2 [Mus musculu... 235 6e-62
Alignment gi|NP_032273.1| lipid phosphate phosphohydrolase 1 isoform 1 [M... 231 9e-61
Alignment gi|NP_848871.1| lipid phosphate phosphatase-related protein typ... 97 3e-20
Alignment gi|NP_083701.2| lipid phosphate phosphatase-related protein typ... 94 2e-19
Alignment gi|NP_808332.3| lipid phosphate phosphatase-related protein typ... 90 4e-18
Alignment gi|NP_659184.1| lipid phosphate phosphatase-related protein typ... 85 2e-16
Alignment gi|NP_001164406.1| lipid phosphate phosphatase-related protein ... 73 5e-13
Alignment gi|NP_859009.2| lipid phosphate phosphatase-related protein typ... 73 5e-13
>ref|NP_542122.1| lipid phosphate phosphohydrolase 3 [Mus musculus].
Length = 312
Score = 497 bits (1280), Expect = e-141
Identities = 246/293 (83%), Positives = 254/293 (86%)
Frame = +3
Query: 624 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 803
MQ+YKYDKAIV ESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMA LPF+IIETSTIK
Sbjct: 1 MQSYKYDKAIVPESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAALPFLIIETSTIK 60
Query: 804 PYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ 983
PY RGFYCNDE+IKYPLK ETIND TGEFYRIYYLKEKSRST Q
Sbjct: 61 PYRRGFYCNDESIKYPLKVSETINDAVLCAVGIVIAILAIITGEFYRIYYLKEKSRSTTQ 120
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 1163
NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVC+PDFSQINCSEGYIQNY
Sbjct: 121 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCDPDFSQINCSEGYIQNY 180
Query: 1164 KCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMMAF 1343
+CRGEDSKVQEARKSFFSGHASFS QARFTWRGARLLRPLLQFTL+MMAF
Sbjct: 181 RCRGEDSKVQEARKSFFSGHASFSMFTMLYLVLYLQARFTWRGARLLRPLLQFTLLMMAF 240
Query: 1344 YTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKTKTTLSLAPSGIR 1502
YTGLSRVSD+KHHPSDVLAGFA GALV CCIVFFVSDLFKTKT+LSL IR
Sbjct: 241 YTGLSRVSDYKHHPSDVLAGFAQGALVACCIVFFVSDLFKTKTSLSLPAPAIR 293
>ref|NP_032929.1| lipid phosphate phosphohydrolase 1 isoform 2 [Mus musculus].
Length = 283
Score = 237 bits (604), Expect = 2e-62
Identities = 121/248 (48%), Positives = 157/248 (63%)
Frame = +3
Query: 720 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 899
R+ + LD+ C+ +AGLPF I+ TS P+ RG +CND++IKYP K +TI
Sbjct: 6 RLPYVALDVICVLLAGLPFAIL-TSRHTPFQRGIFCNDDSIKYPYKE-DTIPYALLGGIV 63
Query: 900 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1079
GE +Y+ S S + NPY+A +YK VG FLFG + SQS TDIAK +I
Sbjct: 64 IPFCIIVMSIGESLSVYFNVLHSNSFVGNPYIATIYKAVGAFLFGVSASQSLTDIAKYTI 123
Query: 1080 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXX 1259
G LRPHFL++CNPD+S+INCS+GYI++Y C+G + KV+E R SF+SGH+SFS
Sbjct: 124 GSLRPHFLAICNPDWSKINCSDGYIEDYICQGNEEKVKEGRLSFYSGHSSFSMYCMLFVA 183
Query: 1260 XXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIV 1439
QAR ARLLRP+LQF LI + Y GLSRVSD+KHH SDV G GA + +
Sbjct: 184 LYLQARMKGDWARLLRPMLQFGLIAFSIYVGLSRVSDYKHHWSDVTVGLIQGAAMAILVA 243
Query: 1440 FFVSDLFK 1463
+VSD FK
Sbjct: 244 LYVSDFFK 251
>ref|NP_056632.2| lipid phosphate phosphohydrolase 2 [Mus musculus].
Length = 276
Score = 235 bits (600), Expect = 6e-62
Identities = 125/251 (49%), Positives = 158/251 (62%)
Frame = +3
Query: 717 KRVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXX 896
+R + + LD+ C+ +A LPFII+ T PY RGFYC D++I+YP + +TI
Sbjct: 3 RRWVFVLLDVLCVLVASLPFIIL-TLVNAPYKRGFYCGDDSIRYPYRP-DTITHGLMAGV 60
Query: 897 XXXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVS 1076
GE Y +Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK
Sbjct: 61 IITATVILVSLGEAYLVYTDRLYSRSNFNN-YVAAIYKVLGTFLFGAAVSQSLTDLAKYM 119
Query: 1077 IGRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXX 1256
IGRLRP FL+VC+PD+SQ+NCS GY+Q CRG + V EAR SF+SGH+SF
Sbjct: 120 IGRLRPSFLAVCDPDWSQVNCS-GYVQLEVCRGSPANVTEARLSFYSGHSSFGMYCMLFL 178
Query: 1257 XXXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCI 1436
QAR W+ ARLLRP +QF L+ A Y G +RVSDHKHH SDVL G GALV C
Sbjct: 179 ALYVQARLCWKWARLLRPTVQFFLVAFAIYVGYTRVSDHKHHWSDVLVGLLQGALVACLT 238
Query: 1437 VFFVSDLFKTK 1469
V +VSD FK++
Sbjct: 239 VRYVSDFFKSR 249
>ref|NP_032273.1| lipid phosphate phosphohydrolase 1 isoform 1 [Mus musculus].
Length = 284
Score = 231 bits (590), Expect = 9e-61
Identities = 114/248 (45%), Positives = 152/248 (61%)
Frame = +3
Query: 720 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 899
R+ + LD+ C+ +A +P I++ + P+ RGF+C D ++KYP TI
Sbjct: 6 RLPYVALDVICVLLAAMPMTILKLGKVYPFQRGFFCTDNSVKYPYHDS-TIPSRILAILG 64
Query: 900 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1079
GE +Y+ S S + NPY+A +YK VG FLFG + SQS TDIAK +I
Sbjct: 65 LGLPIFSMSIGESLSVYFNVLHSNSFVGNPYIATIYKAVGAFLFGVSASQSLTDIAKYTI 124
Query: 1080 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXX 1259
G LRPHFL++CNPD+S+INCS+GYI++Y C+G + KV+E R SF+SGH+SFS
Sbjct: 125 GSLRPHFLAICNPDWSKINCSDGYIEDYICQGNEEKVKEGRLSFYSGHSSFSMYCMLFVA 184
Query: 1260 XXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIV 1439
QAR ARLLRP+LQF LI + Y GLSRVSD+KHH SDV G GA + +
Sbjct: 185 LYLQARMKGDWARLLRPMLQFGLIAFSIYVGLSRVSDYKHHWSDVTVGLIQGAAMAILVA 244
Query: 1440 FFVSDLFK 1463
+VSD FK
Sbjct: 245 LYVSDFFK 252
>ref|NP_848871.1| lipid phosphate phosphatase-related protein type 1 [Mus musculus].
Length = 325
Score = 97.1 bits (240), Expect = 3e-20
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 22/269 (8%)
Frame = +3
Query: 684 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 854
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVENNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 855 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 986
E I+ GE +Y++K S I +
Sbjct: 60 PGTEEESFISPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAEEKMILTGDCCYLS 118
Query: 987 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1160
P + + + +G F FG + F + +V G L P+FL+VC P+++ +C + +I N
Sbjct: 119 PLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCQPNYTSTDCRAHQQFINN 178
Query: 1161 YK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMM 1337
C G+ +++AR+SF S HA+ S + + +RL +P+L +
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
Query: 1338 AFYTGLSRVSDHKHHPSDVLAGFAPGALV 1424
AF TGL+RVS++++H SDV+AGF G V
Sbjct: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAV 267
>ref|NP_083701.2| lipid phosphate phosphatase-related protein type 5 [Mus musculus].
Length = 316
Score = 94.4 bits (233), Expect = 2e-19
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQ-- 1157
NP V + +G + FG + F + +V G L PHFL++C P+++ + C + Y Q
Sbjct: 113 NPLVRRTVRFLGIYAFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQ-YTQFI 171
Query: 1158 --NYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G + ARK+F S A+ S + +G RL +P+L L+
Sbjct: 172 SGEEACTGNPDLIMRARKTFPSKEAALSVYAATYLTMYITSTIKAKGTRLAKPVLCLGLM 231
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
+AF TGL+RV+++++H SDV+AGF G + +V V + FK
Sbjct: 232 CLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFK 275
>ref|NP_808332.3| lipid phosphate phosphatase-related protein type 4 [Mus musculus].
Length = 766
Score = 90.1 bits (222), Expect = 4e-18
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 18/227 (7%)
Frame = +3
Query: 789 TSTIKPYHRGFYCNDETIKYPL--KTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKE 962
T KP H GF C D ++ P T E I GE +Y
Sbjct: 92 TDVFKPVHSGFSCYDRSLSMPYIEPTQEAIPFLMLLSLAFAGPAITIMVGEGI-LYCCLS 150
Query: 963 KSRSTIQ------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLS 1106
K R+ N ++ + VG +FG + TDI ++S G P+FL+
Sbjct: 151 KRRNGAGLEPNINAGGCNFNSFLRRAVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLT 210
Query: 1107 VCNPDFSQINCS---EGYIQNYKCRGED-SKVQEARKSFFSGHASFSXXXXXXXXXXXQA 1274
VC P+++ +N S YI C G D + + RKSF S HA+ + +
Sbjct: 211 VCKPNYTSLNVSCKENSYIVEDICSGSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNS 270
Query: 1275 RFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPG 1415
T ++LL+PLL FT I+ GL+R++ +K+HP DV GF G
Sbjct: 271 TLT-DSSKLLKPLLVFTFIICGIICGLTRITQYKNHPVDVYCGFLIG 316
>ref|NP_659184.1| lipid phosphate phosphatase-related protein type 2 [Mus musculus].
Length = 343
Score = 84.7 bits (208), Expect = 2e-16
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 31/252 (12%)
Frame = +3
Query: 789 TSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXT---GEFYRIYYLK 959
T T + +GF+C D P E + T GE R ++
Sbjct: 39 TDTFPVHTQGFFCYDSAYAKPYPGPEAASRAPPALIYALVTAGPTLTILLGELARAFFPA 98
Query: 960 EKSRSTIQ-------------NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHF 1100
S S + +P + L + +G + FG + F + +V G PHF
Sbjct: 99 PPSSSPVSGESTIVSGACCRFSPPLRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHF 158
Query: 1101 LSVCNPDFSQINCS---------EGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXX 1250
LSVC P+++ + C + ++ + C G S V AR++F A+
Sbjct: 159 LSVCRPNYTALGCPPPSPDRPGPDRFVTDQSACAGSPSLVAAARRAFPCKDAALCAYAVT 218
Query: 1251 XXXXXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGA---- 1418
F +G+RL++P L L+ AF G+ RV+++++H SDVLAGF GA
Sbjct: 219 YTAMYVTLVFRVKGSRLVKPSLCLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIAT 278
Query: 1419 -LVTCCIVFFVS 1451
LVTC + F S
Sbjct: 279 FLVTCVVHNFQS 290
>ref|NP_001164406.1| lipid phosphate phosphatase-related protein type 3 isoform 2 [Mus
musculus].
Length = 454
Score = 73.2 bits (178), Expect = 5e-13
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS---EGYI 1154
N ++ + VG +FG + TD+ +++ G P FL+VC P+++ + S YI
Sbjct: 122 NSFLRRTVRFVGVHVFGLCATALVTDVIQLATGYHTPFFLTVCKPNYTLLGTSCESNPYI 181
Query: 1155 QNYKCRGEDSK-VQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G D+ + ARK+F S HA+ S A + +LL+P+L F
Sbjct: 182 TQDICSGHDTHAILSARKTFPSQHATLSAFAAVYVSMYFNAVIS-DTTKLLKPILVFAFA 240
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPGA 1418
+ A GL++++ ++ HP DV AGF GA
Sbjct: 241 IAAGVCGLTQITQYRSHPVDVYAGFLIGA 269
>ref|NP_859009.2| lipid phosphate phosphatase-related protein type 3 isoform 1 [Mus
musculus].
Length = 716
Score = 73.2 bits (178), Expect = 5e-13
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS---EGYI 1154
N ++ + VG +FG + TD+ +++ G P FL+VC P+++ + S YI
Sbjct: 122 NSFLRRTVRFVGVHVFGLCATALVTDVIQLATGYHTPFFLTVCKPNYTLLGTSCESNPYI 181
Query: 1155 QNYKCRGEDSK-VQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G D+ + ARK+F S HA+ S A + +LL+P+L F
Sbjct: 182 TQDICSGHDTHAILSARKTFPSQHATLSAFAAVYVSMYFNAVIS-DTTKLLKPILVFAFA 240
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPGA 1418
+ A GL++++ ++ HP DV AGF GA
Sbjct: 241 IAAGVCGLTQITQYRSHPVDVYAGFLIGA 269
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 46,030,885
Number of extensions: 1182779
Number of successful extensions: 4729
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 4700
Number of HSP's successfully gapped: 11
Length of query: 501
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 395
Effective length of database: 12,433,743
Effective search space: 4911328485
Effective search space used: 4911328485
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012123
(1503 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_003704.3| lipid phosphate phosphohydrolase 3 [Homo sapien... 506 e-143
Alignment gi|NP_003702.2| lipid phosphate phosphohydrolase 1 isoform 1 [H... 240 3e-63
Alignment gi|NP_795714.1| lipid phosphate phosphohydrolase 1 isoform 2 [H... 233 5e-61
Alignment gi|NP_003703.1| lipid phosphate phosphohydrolase 2 isoform 1 [H... 222 8e-58
Alignment gi|NP_808211.1| lipid phosphate phosphohydrolase 2 isoform 3 [H... 209 4e-54
Alignment gi|NP_803545.1| lipid phosphate phosphohydrolase 2 isoform 2 [H... 182 5e-46
Alignment gi|NP_997182.1| lipid phosphate phosphatase-related protein typ... 98 2e-20
Alignment gi|NP_060223.2| lipid phosphate phosphatase-related protein typ... 98 2e-20
Alignment gi|NP_001032394.1| lipid phosphate phosphatase-related protein ... 93 6e-19
Alignment gi|NP_001010861.1| lipid phosphate phosphatase-related protein ... 93 6e-19
>ref|NP_003704.3| lipid phosphate phosphohydrolase 3 [Homo sapiens].
Length = 311
Score = 506 bits (1303), Expect = e-143
Identities = 252/293 (86%), Positives = 257/293 (87%)
Frame = +3
Query: 624 MQNYKYDKAIVAESKNGGSPALNNNPRKGGSKRVLLICLDLFCLFMAGLPFIIIETSTIK 803
MQNYKYDKAIV ESKNGGSPALNNNPR+ GSKRVLLICLDLFCLFMAGLPF+IIETSTIK
Sbjct: 1 MQNYKYDKAIVPESKNGGSPALNNNPRRSGSKRVLLICLDLFCLFMAGLPFLIIETSTIK 60
Query: 804 PYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ 983
PYHRGFYCNDE+IKYPLKTGETIND TGEFYRIYYLK KSRSTIQ
Sbjct: 61 PYHRGFYCNDESIKYPLKTGETINDAVLCAVGIVIAILAIITGEFYRIYYLK-KSRSTIQ 119
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 1163
NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY
Sbjct: 120 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNY 179
Query: 1164 KCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMMAF 1343
+CRG+DSKVQEARKSFFSGHASFS QARFTWRGARLLRPLLQFTLIMMAF
Sbjct: 180 RCRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMMAF 239
Query: 1344 YTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKTKTTLSLAPSGIR 1502
YTGLSRVSDHKHHPSDVLAGFA GALV CCIVFFVSDLFKTKTTLSL IR
Sbjct: 240 YTGLSRVSDHKHHPSDVLAGFAQGALVACCIVFFVSDLFKTKTTLSLPAPAIR 292
>ref|NP_003702.2| lipid phosphate phosphohydrolase 1 isoform 1 [Homo sapiens].
Length = 284
Score = 240 bits (612), Expect = 3e-63
Identities = 127/252 (50%), Positives = 159/252 (63%)
Frame = +3
Query: 720 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 899
R+ + LD+ C+ +AGLPF I+ TS P+ RG +CNDE+IKYP K +TI
Sbjct: 6 RLPYVALDVLCVLLAGLPFAIL-TSRHTPFQRGVFCNDESIKYPYKE-DTIPYALLGGII 63
Query: 900 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1079
GE +Y S S I+N Y+A +YK +G FLFG A SQS TDIAK SI
Sbjct: 64 IPFSIIVIILGETLSVYCNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSI 123
Query: 1080 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXX 1259
GRLRPHFL VC+PD+S+INCS+GYI+ Y CRG +V+E R SF+SGH+SFS
Sbjct: 124 GRLRPHFLDVCDPDWSKINCSDGYIEYYICRGNAERVKEGRLSFYSGHSSFSMYCMLFVA 183
Query: 1260 XXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIV 1439
QAR ARLLRP LQF L+ ++ Y GLSRVSD+KHH SDVL G GALV +
Sbjct: 184 LYLQARMKGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVAILVA 243
Query: 1440 FFVSDLFKTKTT 1475
+VSD FK +T+
Sbjct: 244 VYVSDFFKERTS 255
>ref|NP_795714.1| lipid phosphate phosphohydrolase 1 isoform 2 [Homo sapiens].
Length = 285
Score = 233 bits (593), Expect = 5e-61
Identities = 118/252 (46%), Positives = 153/252 (60%)
Frame = +3
Query: 720 RVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXX 899
R+ + LD+ C+ +A +P +++ I P+ RGF+C D +I YP T+
Sbjct: 6 RLPYVALDVLCVLLASMPMAVLKLGQIYPFQRGFFCKDNSINYPYHDS-TVTSTVLILVG 64
Query: 900 XXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSI 1079
GE +Y S S I+N Y+A +YK +G FLFG A SQS TDIAK SI
Sbjct: 65 VGLPISSIILGETLSVYCNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSI 124
Query: 1080 GRLRPHFLSVCNPDFSQINCSEGYIQNYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXX 1259
GRLRPHFL VC+PD+S+INCS+GYI+ Y CRG +V+E R SF+SGH+SFS
Sbjct: 125 GRLRPHFLDVCDPDWSKINCSDGYIEYYICRGNAERVKEGRLSFYSGHSSFSMYCMLFVA 184
Query: 1260 XXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIV 1439
QAR ARLLRP LQF L+ ++ Y GLSRVSD+KHH SDVL G GALV +
Sbjct: 185 LYLQARMKGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVAILVA 244
Query: 1440 FFVSDLFKTKTT 1475
+VSD FK +T+
Sbjct: 245 VYVSDFFKERTS 256
>ref|NP_003703.1| lipid phosphate phosphohydrolase 2 isoform 1 [Homo sapiens].
Length = 288
Score = 222 bits (565), Expect = 8e-58
Identities = 121/252 (48%), Positives = 156/252 (61%), Gaps = 1/252 (0%)
Frame = +3
Query: 717 KRVLLICLDLFCLFMAGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXX 896
+R + + LD+ CL +A LPF I+ T PY RGFYC D++I+YP + +TI
Sbjct: 3 RRWVFVLLDVLCLLVASLPFAIL-TLVNAPYKRGFYCGDDSIRYPYRP-DTITHGLMAGV 60
Query: 897 XXXXXXXXXXTGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVS 1076
GE Y +Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK
Sbjct: 61 TITATVILVSAGEAYLVYTDRLYSRSDFNN-YVAAVYKVLGTFLFGAAVSQSLTDLAKYM 119
Query: 1077 IGRLRPHFLSVCNPDFSQINCSEGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXXX 1253
IGRLRP+FL+VC+PD+S++NCS Y+Q K CRG + V EAR SF+SGH+SF
Sbjct: 120 IGRLRPNFLAVCDPDWSRVNCSV-YVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVF 178
Query: 1254 XXXXXQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCC 1433
QAR W+ ARLLRP +QF L+ A Y G +RVSD+KHH SDVL G GALV
Sbjct: 179 LALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAAL 238
Query: 1434 IVFFVSDLFKTK 1469
V ++SD FK +
Sbjct: 239 TVCYISDFFKAR 250
>ref|NP_808211.1| lipid phosphate phosphohydrolase 2 isoform 3 [Homo sapiens].
Length = 309
Score = 209 bits (533), Expect = 4e-54
Identities = 116/237 (48%), Positives = 146/237 (61%), Gaps = 1/237 (0%)
Frame = +3
Query: 762 AGLPFIIIETSTIKPYHRGFYCNDETIKYPLKTGETINDXXXXXXXXXXXXXXXXTGEFY 941
A LPF I+ T PY RGFYC D++I+YP + +TI GE Y
Sbjct: 39 ASLPFAIL-TLVNAPYKRGFYCGDDSIRYPYRP-DTITHGLMAGVTITATVILVSAGEAY 96
Query: 942 RIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPD 1121
+Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK IGRLRP+FL+VC+PD
Sbjct: 97 LVYTDRLYSRSDFNN-YVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPD 155
Query: 1122 FSQINCSEGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGAR 1298
+S++NCS Y+Q K CRG + V EAR SF+SGH+SF QAR W+ AR
Sbjct: 156 WSRVNCSV-YVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWAR 214
Query: 1299 LLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKTK 1469
LLRP +QF L+ A Y G +RVSD+KHH SDVL G GALV V ++SD FK +
Sbjct: 215 LLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKAR 271
>ref|NP_803545.1| lipid phosphate phosphohydrolase 2 isoform 2 [Homo sapiens].
Length = 232
Score = 182 bits (463), Expect = 5e-46
Identities = 97/181 (53%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Frame = +3
Query: 930 GEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSV 1109
GE Y +Y + SRS N YVAA+YK +G FLFG A+SQS TD+AK IGRLRP+FL+V
Sbjct: 16 GEAYLVYTDRLYSRSDFNN-YVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAV 74
Query: 1110 CNPDFSQINCSEGYIQNYK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTW 1286
C+PD+S++NCS Y+Q K CRG + V EAR SF+SGH+SF QAR W
Sbjct: 75 CDPDWSRVNCSV-YVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCW 133
Query: 1287 RGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFKT 1466
+ ARLLRP +QF L+ A Y G +RVSD+KHH SDVL G GALV V ++SD FK
Sbjct: 134 KWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKA 193
Query: 1467 K 1469
+
Sbjct: 194 R 194
>ref|NP_997182.1| lipid phosphate phosphatase-related protein type 1 [Homo sapiens].
Length = 325
Score = 98.2 bits (243), Expect = 2e-20
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 22/282 (7%)
Frame = +3
Query: 684 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 854
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 855 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 986
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 987 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1160
P + + + G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINN 178
Query: 1161 YK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMM 1337
C G+ +++AR+SF S HA+ S + + +RL +P+L +
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
Query: 1338 AFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
AF TGL+RVS++++H SDV+AGF G V + V FK
Sbjct: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 280
>ref|NP_060223.2| lipid phosphate phosphatase-related protein type 1 [Homo sapiens].
Length = 325
Score = 98.2 bits (243), Expect = 2e-20
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 22/282 (7%)
Frame = +3
Query: 684 ALNNNPRKGGSKRVLLICLDLFCLFMAG---LPFIIIETSTIKPYHRGFYCNDETIKYPL 854
A+ NN ++ S I ++L + MAG L + T T + + +GF+C D + P
Sbjct: 2 AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
Query: 855 KTGET---INDXXXXXXXXXXXXXXXXTGEFYRIYYLKEKSRSTIQ-------------N 986
E I GE +Y++K S I N
Sbjct: 60 PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
Query: 987 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 1160
P + + + G F FG + F + +V G L P+FL+VC P+++ +C +I N
Sbjct: 119 PLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINN 178
Query: 1161 YK-CRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLIMM 1337
C G+ +++AR+SF S HA+ S + + +RL +P+L +
Sbjct: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
Query: 1338 AFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
AF TGL+RVS++++H SDV+AGF G V + V FK
Sbjct: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 280
>ref|NP_001032394.1| lipid phosphate phosphatase-related protein type 5 isoform 1 [Homo
sapiens].
Length = 321
Score = 93.2 bits (230), Expect = 6e-19
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQ-- 1157
NP V + +G + FG + F + +V G L PHFL++C P+++ + C + Y Q
Sbjct: 113 NPLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQ-YTQFI 171
Query: 1158 --NYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G + ARK+F S A+ S +G RL +P+L L+
Sbjct: 172 SGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLM 231
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
+AF TGL+RV+++++H SDV+AGF G + +V V + FK
Sbjct: 232 CLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFK 275
>ref|NP_001010861.1| lipid phosphate phosphatase-related protein type 5 isoform 2 [Homo
sapiens].
Length = 316
Score = 93.2 bits (230), Expect = 6e-19
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Frame = +3
Query: 984 NPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQ-- 1157
NP V + +G + FG + F + +V G L PHFL++C P+++ + C + Y Q
Sbjct: 113 NPLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQ-YTQFI 171
Query: 1158 --NYKCRGEDSKVQEARKSFFSGHASFSXXXXXXXXXXXQARFTWRGARLLRPLLQFTLI 1331
C G + ARK+F S A+ S +G RL +P+L L+
Sbjct: 172 SGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLM 231
Query: 1332 MMAFYTGLSRVSDHKHHPSDVLAGFAPGALVTCCIVFFVSDLFK 1463
+AF TGL+RV+++++H SDV+AGF G + +V V + FK
Sbjct: 232 CLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFK 275
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 54,558,306
Number of extensions: 1421605
Number of successful extensions: 5800
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 5747
Number of HSP's successfully gapped: 16
Length of query: 501
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 394
Effective length of database: 14,770,016
Effective search space: 5819386304
Effective search space used: 5819386304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012123
(1503 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 1061 0.0
>Sscrofa_Chr06
|| Length = 157765593
Score = 1061 bits (535), Expect = 0.0
Identities = 538/539 (99%)
Strand = Plus / Plus
Query: 224 aggaggaggaaagtaggagttggggcagcgctccgaggtggctgggctccgcgcagctcc 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642325 aggaggaggaaagtaggagttggggcagcgctccgaggtggctgggctccgcgcagctcc 143642384
Query: 284 cattcattaagcaaccagctgcggaggaaggtggccgagcgcccgcgctgccccctcgct 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642385 cattcattaagcaaccagctgcggaggaaggtggccgagcgcccgcgctgccccctcgct 143642444
Query: 344 gctttgcgcacggacacgccagctccgcgcgtccggagcaacgcagcgctgcagaagttt 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642445 gctttgcgcacggacacgccagctccgcgcgtccggagcaacgcagcgctgcagaagttt 143642504
Query: 404 ctgctcgggagttgactctcttccccttggactttcgaacgattcggggttgagacagga 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642505 ctgctcgggagttgactctcttccccttggactttcgaacgattcggggttgagacagga 143642564
Query: 464 aaagcggaggagcaccagggagcagaaagcaccaccgcctgcccttggaagcggggcagc 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642565 aaagcggaggagcaccagggagcagaaagcaccaccgcctgcccttggaagcggggcagc 143642624
Query: 524 ggggccgcactctcccgccgcgcccggagaagcctcggtcgggaggcgaccccggcgtct 583
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 143642625 ggggccgcactctcccgccgcgccccgagaagcctcggtcgggaggcgaccccggcgtct 143642684
Query: 584 gggtgtgtggctgcagtcgtggggcgtcttggccagcgccatgcaaaactacaagtacga 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642685 gggtgtgtggctgcagtcgtggggcgtcttggccagcgccatgcaaaactacaagtacga 143642744
Query: 644 caaggctatcgtcgcggagagcaagaacggcggcagcccggcgctcaataacaacccgag 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642745 caaggctatcgtcgcggagagcaagaacggcggcagcccggcgctcaataacaacccgag 143642804
Query: 704 gaagggcggcagcaagcgggtgctgctcatctgcctggacctcttctgcctcttcatgg 762
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642805 gaagggcggcagcaagcgggtgctgctcatctgcctggacctcttctgcctcttcatgg 143642863
Score = 561 bits (283), Expect = e-157
Identities = 283/283 (100%)
Strand = Plus / Plus
Query: 920 gatcatcacgggggaattctaccgcatctattacctgaaggagaagtcccggtcgacaat 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706338 gatcatcacgggggaattctaccgcatctattacctgaaggagaagtcccggtcgacaat 143706397
Query: 980 ccagaatccctatgtggcagccctctataagcaagtgggctgcttcctcttcggctgtgc 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706398 ccagaatccctatgtggcagccctctataagcaagtgggctgcttcctcttcggctgtgc 143706457
Query: 1040 catcagccagtccttcacggacattgccaaggtctccatagggcgcctgcgtcctcactt 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706458 catcagccagtccttcacggacattgccaaggtctccatagggcgcctgcgtcctcactt 143706517
Query: 1100 cttgagcgtctgcaaccccgatttcagccagatcaactgctccgaaggctacatccaaaa 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706518 cttgagcgtctgcaaccccgatttcagccagatcaactgctccgaaggctacatccaaaa 143706577
Query: 1160 ctacaagtgtagaggcgaggacagcaaagtccaggaagccagg 1202
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143706578 ctacaagtgtagaggcgaggacagcaaagtccaggaagccagg 143706620
Score = 341 bits (172), Expect = 7e-91
Identities = 178/180 (98%)
Strand = Plus / Plus
Query: 1259 gctgtacctgcaggcccgcttcacttggcgaggtgcccggctgctccggccgctcctgca 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143717085 gctgtacctgcaggcccgcttcacttggcgaggtgcccggctgctccggccgctcctgca 143717144
Query: 1319 gttcaccctgatcatgatggccttttacacaggactgtcccgtgtgtctgatcacaagca 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143717145 gttcaccctgatcatgatggccttttacacaggactgtcccgtgtgtctgatcacaagca 143717204
Query: 1379 ccaccccagcgatgtcctggctggatttgctccaggagccctggtaacctgctgcatagt 1438
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 143717205 ccaccccagcgatgtcctggctggatttgctcaaggagccctggtagcctgctgcatagt 143717264
Score = 315 bits (159), Expect = 4e-83
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 762 gcgggcctgcccttcatcatcatcgagacaagcaccatcaagccttaccaccggggtttt 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143689202 gcgggcctgcccttcatcatcatcgagacaagcaccatcaagccttaccaccggggtttt 143689261
Query: 822 tattgcaatgacgagaccatcaagtacccgctgaaaaccggggagacaatcaatgatgct 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143689262 tattgcaatgacgagaccatcaagtacccgctgaaaaccggggagacaatcaatgatgct 143689321
Query: 882 gtgctctgcgctgtgggcattgtgatcgccatcctcgcg 920
|||||||||||||||||||||||||||||||||||||||
Sbjct: 143689322 gtgctctgcgctgtgggcattgtgatcgccatcctcgcg 143689360
Score = 291 bits (147), Expect = 6e-76
Identities = 147/147 (100%)
Strand = Plus / Plus
Query: 1 attatcctacgtcttaggctgcttaaggaaggggctgtgctttcggaatcccttctgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642117 attatcctacgtcttaggctgcttaaggaaggggctgtgctttcggaatcccttctgagc 143642176
Query: 61 caagtaaggaggtccctctctttgcctctctctcttttttaaaggacctcatgaaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143642177 caagtaaggaggtccctctctttgcctctctctcttttttaaaggacctcatgaaataaa 143642236
Query: 121 agtgccgaaaacaaacccaggcgatca 147
|||||||||||||||||||||||||||
Sbjct: 143642237 agtgccgaaaacaaacccaggcgatca 143642263
Score = 121 bits (61), Expect = 1e-24
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1199 caggaagtccttcttctctggccatgcctccttctccatgtacactatgctgtatctgat 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143707033 caggaagtccttcttctctggccatgcctccttctccatgtacactatgctgtatctgat 143707092
Query: 1259 g 1259
|
Sbjct: 143707093 g 143707093
Score = 117 bits (59), Expect = 2e-23
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1437 gttttcttcgtgtctgacctcttcaagaccaagacgactctgtccctggctccctctggc 1496
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 143732116 gttttcttcgtgtctgacctcttcaagaccaagacgactctgtccctgcctccctctgcc 143732175
Query: 1497 atcagga 1503
|||||||
Sbjct: 143732176 atcagga 143732182
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,280,005
Number of extensions: 453
Number of successful extensions: 453
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 453
Number of HSP's successfully gapped: 7
Length of query: 1503
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1482
Effective length of database: 2,808,413,156
Effective search space: 4162068297192
Effective search space used: 4162068297192
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)