Animal-Genome cDNA 20110601C-012149

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012149
         (1140 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776946.1| coronin-1A [Bos taurus].                             642   0.0  
Alignment   gi|NP_001075059.1| coronin-1C [Bos taurus].                          510   e-145
Alignment   gi|NP_001106714.1| coronin, actin binding protein, 1B [Bos taur...   502   e-142
Alignment   gi|NP_001095752.1| coronin-6 [Bos taurus].                           407   e-113
Alignment   gi|XP_002690572.1| PREDICTED: coronin, actin binding protein, 2...   314   8e-86
Alignment   gi|NP_001033309.1| coronin-2A [Bos taurus].                          302   4e-82
Alignment   gi|XP_002706553.1| PREDICTED: coronin, actin binding protein, 2...   240   2e-63
Alignment   gi|NP_001069371.1| coronin-7 [Bos taurus].                           174   1e-43
Alignment   gi|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus].       73   5e-13
Alignment   gi|NP_001070481.1| histone-binding protein RBBP4 [Bos taurus].        68   1e-11

>ref|NP_776946.1| coronin-1A [Bos taurus].
          Length = 461

 Score =  642 bits (1656), Expect = 0.0
 Identities = 309/321 (96%), Positives = 313/321 (97%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQPAKADQCYEDVRVSQ TWDSGFCAVNPKFVALICEASGGGAFLVLPL KTGR
Sbjct: 10   KFRHVFGQPAKADQCYEDVRVSQNTWDSGFCAVNPKFVALICEASGGGAFLVLPLGKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN PMVCGHTAPVLDIAWCPHNDNVIASGSEDC+VMVWEIPDGGLTLPLREPVVTLEG
Sbjct: 70   VDKNVPMVCGHTAPVLDIAWCPHNDNVIASGSEDCSVMVWEIPDGGLTLPLREPVVTLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG AVLTLGSDVHPDTIYSVDWSRDGA
Sbjct: 130  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGVAVLTLGSDVHPDTIYSVDWSRDGA 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL
Sbjct: 190  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WDTKHLEEPLSL ELDTSSGVLLPFF P+  IVYLCGKGDSSIRYFEITS+APFLHYLSM
Sbjct: 250  WDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+ESQRGMGYMPKRGLEVN
Sbjct: 310  FSSKESQRGMGYMPKRGLEVN 330


>ref|NP_001075059.1| coronin-1C [Bos taurus].
          Length = 474

 Score =  510 bits (1314), Expect = e-145
 Identities = 231/321 (71%), Positives = 282/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ  K DQCY+D+RVS+ TWDS FCAVNP+FVA+I EASGGGAFLVLPL KTGR
Sbjct: 9    KFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHKTGR 68

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK+ P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLTL L EPVV LEG
Sbjct: 69   IDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEG 128

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGIVAWHPTA+NVLLSAGCDN I++W+VGTG A++ L  D+H D IY+V W+R+G+
Sbjct: 129  HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINL-DDMHSDMIYNVSWNRNGS 187

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICT+ +DK+VR+I+PRK  IVAEK++ HEG RP+RA+F++DG + TTGFSRMSERQ+AL
Sbjct: 188  LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            W+ K++EEP++L E+DTS+GVLLPF+ P+  I+YLCGKGDSSIRYFEIT ++P++HYL+ 
Sbjct: 248  WNPKNMEEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYLNT 307

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMGYMPKRGL+VN
Sbjct: 308  FSSKEPQRGMGYMPKRGLDVN 328


>ref|NP_001106714.1| coronin, actin binding protein, 1B [Bos taurus].
          Length = 488

 Score =  502 bits (1293), Expect = e-142
 Identities = 226/321 (70%), Positives = 277/321 (86%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFLVLPLSKTGR
Sbjct: 10   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GL  PL EPVV LEG
Sbjct: 70   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLVSPLTEPVVVLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIV WHPTA+NVLLSAGCDN++L+W+VGT   +  L S +HPD IY+V W+R+G+
Sbjct: 130  HTKRVGIVTWHPTARNVLLSAGCDNMVLIWNVGTAEELYRLDS-LHPDLIYNVSWNRNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L CT+C+DK VR+I+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+AL
Sbjct: 189  LFCTACKDKSVRVIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 248

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD ++  EP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT + P++H+L+ 
Sbjct: 249  WDPENFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDEPPYIHFLNT 308

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 309  FTSKEPQRGMGSMPKRGLEVS 329


>ref|NP_001095752.1| coronin-6 [Bos taurus].
          Length = 431

 Score =  407 bits (1045), Expect = e-113
 Identities = 195/321 (60%), Positives = 242/321 (75%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ AKADQ YED+RVS+ TWDS FCAVNPKF+A+I EA GGGAF+VLPL+KTGR
Sbjct: 10   KFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN P+V GHTAPVLDI WCPHNDNVIAS S+D T+MVW+IPD      + EP++TLEG
Sbjct: 70   VDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPVRSITEPIITLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGI++WHPTA+NVLLSAG DNVI++W+VGTG  +L+L  D+HPD I+SV W+ +G+
Sbjct: 130  HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSL-DDMHPDVIHSVCWNTNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L+ T+C+DK +RII+PRKG +VA                                     
Sbjct: 189  LLATTCKDKTLRIIDPRKGQVVA------------------------------------- 211

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
                + EEP++L E+DTS+GVLLPF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ 
Sbjct: 212  ---NNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHYLNT 268

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMG+MPKRGL+V+
Sbjct: 269  FSSKEPQRGMGFMPKRGLDVS 289


>ref|XP_002690572.1| PREDICTED: coronin, actin binding protein, 2B-like [Bos taurus].
          Length = 442

 Score =  314 bits (805), Expect = 8e-86
 Identities = 148/322 (45%), Positives = 222/322 (68%), Gaps = 1/322 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFR+V+G+ A  + C++ + +++   D+ FCAVN +F+A++ E++GGG+FLV+PL +TGR
Sbjct: 11   KFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            ++ N P VCGH   VLDI W P  DN+IAS SED +V +WEIP+GGL   + E ++ L G
Sbjct: 71   IEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H++RVG+V WHPT  N+L SAG D  +L+W++  G  V  +  D H D I  + ++ DG+
Sbjct: 131  HSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMI--DCHSDVILCMSFNTDGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSERQVA 892
            L+ T+C+DK++R+IEPR G ++ E +  +   R  R VF+ + K +LTTG SR + RQ+A
Sbjct: 189  LLTTTCKDKKLRVIEPRSGRVLQEANCKNH--RVNRVVFLGNMKRLLTTGVSRWNTRQIA 246

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWD + L  PL   E+D  SG+L PF+  +  ++YL GKGD +IRY+EI+++ P+L YL 
Sbjct: 247  LWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLM 306

Query: 1073 MFSSQESQRGMGYMPKRGLEVN 1138
             F S   Q+G+G MPK GL+V+
Sbjct: 307  EFRSPAPQKGLGVMPKHGLDVS 328


>ref|NP_001033309.1| coronin-2A [Bos taurus].
          Length = 525

 Score =  302 bits (773), Expect = 4e-82
 Identities = 143/325 (44%), Positives = 221/325 (68%), Gaps = 4/325 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFG+PA  + CY+ V ++ +  D+ FCAVNP F+A++ E +GGGAFLV+PL +TG+
Sbjct: 11   KFRHVFGKPASKENCYDSVPITHSVQDNHFCAVNPHFIAVVTECTGGGAFLVIPLHQTGK 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +D + P VCGH   VLD+ W P ND  IAS SED T+ +W+IP   LT  L      L G
Sbjct: 71   LDPHYPKVCGHRGNVLDVKWNPFNDFEIASCSEDATIKIWDIPKQLLTKNLTAFRKELVG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL---TLGSDVHPDTIYSVDWSR 706
            H ++VG+V WHPTA N+L S+G D  ++VW++ +  +V+       + H D I S+ ++ 
Sbjct: 131  HARKVGLVEWHPTAANILFSSGYDYKVMVWNLDSKESVIMSPVKTINCHQDVILSMSFNT 190

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSD-GKILTTGFSRMSER 883
            +G+L+ T+C+D+++R+++PR GT++ E +  ++G R  + +F+ +  K+L+TG SR + R
Sbjct: 191  NGSLLATACKDRKIRVLDPRAGTVLQEAN--YKGHRANKVLFLGNLKKLLSTGTSRWNNR 248

Query: 884  QVALWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLH 1063
            Q+ALWD   L  P++  +LD SSGVL PF+  +  ++Y+ GKGD +I Y+EI++  P L+
Sbjct: 249  QMALWDQDDLSVPVTEVDLDGSSGVLFPFYDADTNMLYVVGKGDRNIHYYEISANKPHLN 308

Query: 1064 YLSMFSSQESQRGMGYMPKRGLEVN 1138
            YL  + S   Q+G+G MPKRGL+V+
Sbjct: 309  YLMEYHSYNPQKGIGVMPKRGLDVS 333


>ref|XP_002706553.1| PREDICTED: coronin, actin binding protein, 2B, partial [Bos taurus].
          Length = 430

 Score =  240 bits (612), Expect = 2e-63
 Identities = 120/265 (45%), Positives = 175/265 (66%), Gaps = 1/265 (0%)
 Frame = +2

Query: 347  TGRVDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVT 526
            TGR++ N P VCGH   VLDI W P  DN+IAS SED +V +WEIP+GGL   + E ++ 
Sbjct: 1    TGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLE 60

Query: 527  LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSR 706
            L GH++RVG+V WHPT  N+L SAG D  +L+W++  G  V  +  D H D I  + ++ 
Sbjct: 61   LHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMI--DCHSDVILCMSFNT 118

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSER 883
            DG+L+ T+C+DK++R+IEPR G ++ E +  +   R  R VF+ + K +LTTG SR + R
Sbjct: 119  DGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNH--RVNRVVFLGNMKRLLTTGVSRWNTR 176

Query: 884  QVALWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLH 1063
            Q+ALWD + L  PL   E+D  SG+L PF+  +  ++YL GKGD +IRY+EI+++ P+L 
Sbjct: 177  QIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLS 236

Query: 1064 YLSMFSSQESQRGMGYMPKRGLEVN 1138
            YL  F S   Q+G+  +  + L+VN
Sbjct: 237  YLMEFRSPAPQKGL--VKNQPLKVN 259


>ref|NP_001069371.1| coronin-7 [Bos taurus].
          Length = 915

 Score =  174 bits (441), Expect = 1e-43
 Identities = 109/325 (33%), Positives = 161/325 (49%), Gaps = 5/325 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTW---DSGFCAVNPKFVALICEASGGGAFLVLPLSK 346
            KFRH  G     D    +++    T      GFCA   +    +   S GG   VL L K
Sbjct: 463  KFRHAQGSVLHRDSHITNLKGLNLTTPGESDGFCANQLRVAVPLL--SSGGQVAVLELRK 520

Query: 347  TGRVDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVT 526
             GR+   A     +   V D+AW P + + +A   ED  + +W +P  GL   L  P   
Sbjct: 521  PGRLPDTALPTLQNGVAVTDLAWDPFDPHRLAVAGEDARIRLWRVPPDGLQEVLTMPEAV 580

Query: 527  LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSR 706
            L GHT+++  + +HP A +VL S+  D  + +WD+  GA  L L    H D I+ + WS 
Sbjct: 581  LTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLKVGAEQLRLQG--HRDQIFGLAWSP 638

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSER 883
            DG  + T C+D R+RI EPR      ++    EG R  R V+V DG  +L +GF   SER
Sbjct: 639  DGQQLATVCKDGRLRIYEPRGSPEPLQEGPGPEGARGARVVWVCDGHYLLVSGFDSRSER 698

Query: 884  QVALWDTKHLE-EPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFL 1060
            Q+ L+  K L   P ++  LD +   LLP + P+  +V L GKGD+ +  +E+   APF 
Sbjct: 699  QLLLYSAKALAGGPSAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLPGAPFF 758

Query: 1061 HYLSMFSSQESQRGMGYMPKRGLEV 1135
               + F+S +  +G   +PK   +V
Sbjct: 759  LECNSFTSPDPHKGFILLPKTECDV 783



 Score =  156 bits (394), Expect = 4e-38
 Identities = 98/321 (30%), Positives = 157/321 (48%), Gaps = 1/321 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRH   +  + +    D+R             +   +A    +   G   ++PL   G 
Sbjct: 8    KFRHTEARQPRREAWIGDIRAGTAPSCGNHIKASCSLIAF--NSDHPGVLGIVPLESQGE 65

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
              +    +  H+  V D+ + P +D ++A+ S D TV +W +P  G  LP   P + L  
Sbjct: 66   DKRQVTHLGCHSDLVTDLDFSPFDDFLLATASADRTVKLWRLPLSGQALP-SGPGLLLGP 124

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
               +V ++ +HPTA  VLLSA     + VWD      +  L +  H D +    WSRDGA
Sbjct: 125  EDAQVEVLQFHPTADGVLLSAA-GRAVKVWDATKQQPLTELAT--HGDLVQGAAWSRDGA 181

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKIL-TTGFSRMSERQVA 892
            L+ T+C+DK++RI +PR     A+    HE +R  R V+    + L +TGF++M ER+V 
Sbjct: 182  LLGTTCKDKQLRIFDPRAKPEAAQSTPAHENSRDGRLVWTGTQEYLVSTGFNQMREREVK 241

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWDT+     L+   LDTS   L+P   P+  ++ L GKG++ +  +E   + P L  ++
Sbjct: 242  LWDTRLFSAALTSLTLDTSPRSLVPLLDPDSGLLVLAGKGENQLYCYEAAPQQPALSPVT 301

Query: 1073 MFSSQESQRGMGYMPKRGLEV 1135
                +   RG   +P+R L V
Sbjct: 302  QCLLESVLRGAALVPRRALAV 322


>ref|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus].
          Length = 334

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
 Frame = +2

Query: 377 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEGHTKRVGI 556
           + GH   + D+AW   + N++ S S+D T+ +W++  G       + + TL+GH+  V  
Sbjct: 83  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSG-------KCLKTLKGHSNYVFC 134

Query: 557 VAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCR 736
             ++P + N+++S   D  + +WDV TG  + TL +  H D + +V ++RDG+LI +S  
Sbjct: 135 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSY 191

Query: 737 DKRVRIIEPRKGTIVAEKDRPHEGTRPVRAV-FVSDGKILTTGFSRMSERQVALWD 901
           D   RI +   G  +  K    +   PV  V F  +GK +    +   +  + LWD
Sbjct: 192 DGLCRIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYI---LAATLDNTLKLWD 242


>ref|NP_001070481.1| histone-binding protein RBBP4 [Bos taurus].
          Length = 425

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 50/222 (22%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
 Frame = +2

Query: 197 QPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLS---KTGRVDKN 367
           +P  + +C  D+R+     +    + NP     +  AS      +  +S   K G+V   
Sbjct: 160 KPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDA 219

Query: 368 APMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEGHTKR 547
             +  GHTA V D++W   ++++  S ++D  +M+W+      +    +P  +++ HT  
Sbjct: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTS----KPSHSVDAHTAE 275

Query: 548 VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGS-DVHPDTIYSVDWS-RDGALI 721
           V  ++++P ++ +L +   D  + +WD+      L L S + H D I+ V WS  +  ++
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNETIL 333

Query: 722 CTSCRDKRVRIIEPRKGTIVAEKDRPHEG-TRPVRAVFVSDG 844
            +S  D+R+ + +  K   + E+  P +    P   +F+  G
Sbjct: 334 ASSGTDRRLNVWDLSK---IGEEQSPEDAEDGPPELLFIHGG 372


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 50,095,806
Number of extensions: 1584666
Number of successful extensions: 8126
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 7846
Number of HSP's successfully gapped: 78
Length of query: 380
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 276
Effective length of database: 14,240,222
Effective search space: 3930301272
Effective search space used: 3930301272
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012149
         (1140 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_547069.2| PREDICTED: similar to Coronin-1A (Coronin-like ...   627   e-180
Alignment   gi|XP_543444.2| PREDICTED: similar to Coronin-1C (Coronin-3) (h...   509   e-144
Alignment   gi|XP_864679.1| PREDICTED: similar to coronin, actin binding pr...   507   e-144
Alignment   gi|XP_864662.1| PREDICTED: similar to coronin, actin binding pr...   507   e-144
Alignment   gi|XP_533215.2| PREDICTED: similar to coronin, actin binding pr...   507   e-144
Alignment   gi|XP_548302.2| PREDICTED: similar to coronin relative protein ...   476   e-134
Alignment   gi|XP_864648.1| PREDICTED: similar to coronin, actin binding pr...   427   e-119
Alignment   gi|XP_868335.1| PREDICTED: similar to coronin, actin binding pr...   407   e-114
Alignment   gi|XP_544743.2| PREDICTED: similar to Coronin-2B (Coronin-like ...   315   4e-86
Alignment   gi|XP_538747.2| PREDICTED: similar to coronin, actin binding pr...   301   6e-82

>ref|XP_547069.2| PREDICTED: similar to Coronin-1A (Coronin-like protein p57)
            (Coronin-like protein A) (CLIPINA) (Tryptophan
            aspartate-containing coat protein) (TACO) isoform 1
            [Canis familiaris].
          Length = 495

 Score =  627 bits (1618), Expect = e-180
 Identities = 310/355 (87%), Positives = 315/355 (88%), Gaps = 34/355 (9%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSK--- 346
            KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKF+ALICEASGGGAFLVLPL K   
Sbjct: 10   KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKEAG 69

Query: 347  -------------------------------TGRVDKNAPMVCGHTAPVLDIAWCPHNDN 433
                                           TGRVDKNAP VCGHTAPVLDIAWCPHNDN
Sbjct: 70   VGVPALRASARKACPTSQGLHCLPLWASLRGTGRVDKNAPTVCGHTAPVLDIAWCPHNDN 129

Query: 434  VIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 613
            VIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEGHTKRVGIVAWHPTAQNVLLSAGCDNV
Sbjct: 130  VIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 189

Query: 614  ILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVRIIEPRKGTIVAEKD 793
            ILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVRIIEPRKGT+VAEKD
Sbjct: 190  ILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVRIIEPRKGTVVAEKD 249

Query: 794  RPHEGTRPVRAVFVSDGKILTTGFSRMSERQVALWDTKHLEEPLSLAELDTSSGVLLPFF 973
            RPHEGTRPVRAVFVSDGKILTTGFSRMSERQVALWDTKHLEEPLSL ELDTSSGVLLPFF
Sbjct: 250  RPHEGTRPVRAVFVSDGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 309

Query: 974  TPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSMFSSQESQRGMGYMPKRGLEVN 1138
             P+  IVYLCGKGDSSIRYFEITS+APFLHYLSMFSS+ESQRGMGYMPKRGLEVN
Sbjct: 310  DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN 364


>ref|XP_543444.2| PREDICTED: similar to Coronin-1C (Coronin-3) (hCRNN4) [Canis
            familiaris].
          Length = 474

 Score =  509 bits (1311), Expect = e-144
 Identities = 230/321 (71%), Positives = 282/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ  K DQCY+D+RVS+ TWDS FCAVNP+FVA+I EASGGGAFLVLPL KTGR
Sbjct: 9    KFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHKTGR 68

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK+ P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLTL L EPVV LEG
Sbjct: 69   IDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEG 128

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGIVAWHPTA+NVLLSAGCDN I++W+VGTG A++ L  D+H D IY+V W+R+G+
Sbjct: 129  HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINL-DDMHSDMIYNVSWNRNGS 187

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICT+ +DK+VR+I+PRK  IVAEK++ HEG RP+RA+F++DG + TTGFSRMSERQ+AL
Sbjct: 188  LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            W+ K+++EP++L E+DTS+GVLLPF+ P+  I+YLCGKGDSSIRYFEIT ++P++HYL+ 
Sbjct: 248  WNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYLNT 307

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMGYMPKRGL+VN
Sbjct: 308  FSSKEPQRGMGYMPKRGLDVN 328


>ref|XP_864679.1| PREDICTED: similar to coronin, actin binding protein, 1B isoform 4
            [Canis familiaris].
          Length = 478

 Score =  507 bits (1306), Expect = e-144
 Identities = 229/321 (71%), Positives = 280/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNP+F+A+I EASGGGAFLVLPLSKTGR
Sbjct: 11   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPRFLAVIVEASGGGAFLVLPLSKTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEG
Sbjct: 71   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIV WHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY+V W+R+G+
Sbjct: 131  HTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNVSWNRNGS 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+AL
Sbjct: 190  LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD ++LEEP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT + P++H+L+ 
Sbjct: 250  WDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPPYIHFLNT 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 310  FTSKEPQRGMGSMPKRGLEVS 330


>ref|XP_864662.1| PREDICTED: similar to coronin, actin binding protein, 1B isoform 3
            [Canis familiaris].
          Length = 475

 Score =  507 bits (1306), Expect = e-144
 Identities = 229/321 (71%), Positives = 280/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNP+F+A+I EASGGGAFLVLPLSKTGR
Sbjct: 11   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPRFLAVIVEASGGGAFLVLPLSKTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEG
Sbjct: 71   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIV WHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY+V W+R+G+
Sbjct: 131  HTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNVSWNRNGS 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+AL
Sbjct: 190  LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD ++LEEP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT + P++H+L+ 
Sbjct: 250  WDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPPYIHFLNT 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 310  FTSKEPQRGMGSMPKRGLEVS 330


>ref|XP_533215.2| PREDICTED: similar to coronin, actin binding protein, 1B isoform 1
            [Canis familiaris].
          Length = 489

 Score =  507 bits (1306), Expect = e-144
 Identities = 229/321 (71%), Positives = 280/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNP+F+A+I EASGGGAFLVLPLSKTGR
Sbjct: 11   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPRFLAVIVEASGGGAFLVLPLSKTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEG
Sbjct: 71   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIV WHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY+V W+R+G+
Sbjct: 131  HTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNVSWNRNGS 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+AL
Sbjct: 190  LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD ++LEEP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT + P++H+L+ 
Sbjct: 250  WDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPPYIHFLNT 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 310  FTSKEPQRGMGSMPKRGLEVS 330


>ref|XP_548302.2| PREDICTED: similar to coronin relative protein isoform 1 [Canis
            familiaris].
          Length = 472

 Score =  476 bits (1225), Expect = e-134
 Identities = 220/321 (68%), Positives = 271/321 (84%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ AKADQ YED+RVS+ TWDS FCAVNPKF+A+I EA GGGAF+VLPL+KTGR
Sbjct: 10   KFRHVFGQAAKADQSYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN P+V GHTAPVLDI WCPHNDNVIAS S+D TVMVW+IPD      + EP++TLEG
Sbjct: 70   VDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPIITLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGI++WHPTA+NVLLSAG DNVI++W+VGTG  +L+L  D+HPD I+SV W+ +G+
Sbjct: 130  HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSL-DDLHPDVIHSVCWNSNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L+ T+C+DK +RII+PRKG +VAE+   HEG RP+RAVF   G I TTGF+RMS+R++ L
Sbjct: 189  LLATTCKDKTLRIIDPRKGQVVAERFAAHEGMRPMRAVFTRQGHIFTTGFTRMSQRELGL 248

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD  + EEP++L E+DTS+GVLLPF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ 
Sbjct: 249  WDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHYLNT 308

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMG+MPKRGLEV+
Sbjct: 309  FSSKEPQRGMGFMPKRGLEVS 329


>ref|XP_864648.1| PREDICTED: similar to coronin, actin binding protein, 1B isoform 2
            [Canis familiaris].
          Length = 434

 Score =  427 bits (1097), Expect = e-119
 Identities = 203/321 (63%), Positives = 244/321 (76%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNP+F+A+I EASGGGAFLVLPLSKTGR
Sbjct: 11   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPRFLAVIVEASGGGAFLVLPLSKTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEG
Sbjct: 71   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIV WHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY+V W+R+G+
Sbjct: 131  HTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNVSWNRNGS 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L C++C+DK VRII+PR+GT+VAE                                    
Sbjct: 190  LFCSACKDKSVRIIDPRRGTLVAE------------------------------------ 213

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
                +LEEP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT + P++H+L+ 
Sbjct: 214  ----NLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPPYIHFLNT 269

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 270  FTSKEPQRGMGSMPKRGLEVS 290


>ref|XP_868335.1| PREDICTED: similar to coronin, actin binding protein 6 isoform C
            isoform 3 [Canis familiaris].
          Length = 431

 Score =  407 bits (1047), Expect = e-114
 Identities = 197/321 (61%), Positives = 242/321 (75%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ AKADQ YED+RVS+ TWDS FCAVNPKF+A+I EA GGGAF+VLPL+KTGR
Sbjct: 10   KFRHVFGQAAKADQSYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN P+V GHTAPVLDI WCPHNDNVIAS S+D TVMVW+IPD      + EP++TLEG
Sbjct: 70   VDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPIITLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGI++WHPTA+NVLLSAG DNVI++W+VGTG  +L+L  D+HPD I+SV W+ +G+
Sbjct: 130  HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSL-DDLHPDVIHSVCWNSNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L+ T+C+DK +RII+PRKG +VA                                     
Sbjct: 189  LLATTCKDKTLRIIDPRKGQVVA------------------------------------- 211

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
                + EEP++L E+DTS+GVLLPF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ 
Sbjct: 212  ---NNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHYLNT 268

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMG+MPKRGLEV+
Sbjct: 269  FSSKEPQRGMGFMPKRGLEVS 289


>ref|XP_544743.2| PREDICTED: similar to Coronin-2B (Coronin-like protein C) (ClipinC)
            (Protein FC96) [Canis familiaris].
          Length = 501

 Score =  315 bits (808), Expect = 4e-86
 Identities = 149/322 (46%), Positives = 222/322 (68%), Gaps = 1/322 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFR+V+G+ A  + C++ + +++   D+ FCAVN +F+A++ E++GGG+FLV+PL +TGR
Sbjct: 37   KFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGR 96

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            ++ N P VCGH   VLDI W P  DN+IAS SED +V +WEIP+GGL   + E ++ L G
Sbjct: 97   IEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHG 156

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H++RVG+V WHPT  N+L SAG D  +L+W++  G  V  +  D H D I  + ++ DG+
Sbjct: 157  HSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMI--DCHSDVILCMSFNTDGS 214

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSERQVA 892
            L+ T+C+DK++R+IEPR G ++ E +  +   R  R VF+ + K +LTTG SR + RQ+A
Sbjct: 215  LLTTTCKDKKLRVIEPRSGRVLQEANCKNH--RVNRVVFLGNMKRLLTTGVSRWNTRQIA 272

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWD + L  PL   E+D  SG+L PF+  +  ++YL GKGD +IRY+EI+++ PFL YL 
Sbjct: 273  LWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPFLSYLM 332

Query: 1073 MFSSQESQRGMGYMPKRGLEVN 1138
             F S   Q+G+G MPK GL+V+
Sbjct: 333  EFRSPAPQKGLGVMPKHGLDVS 354


>ref|XP_538747.2| PREDICTED: similar to coronin, actin binding protein, 2A [Canis
            familiaris].
          Length = 540

 Score =  301 bits (772), Expect = 6e-82
 Identities = 149/326 (45%), Positives = 219/326 (67%), Gaps = 6/326 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFG+PA  + CY+ V ++ +  D+ FCAVNP F+A++ E S GGAF V+PL +TG+
Sbjct: 32   KFRHVFGKPASKENCYDSVPITHSVQDNHFCAVNPYFIAVVTECSCGGAFFVIPLHQTGK 91

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +D + P VCGH   VLDI W P ND  IAS SED T+ +W+IP   LT  L      L G
Sbjct: 92   LDPHYPKVCGHKGNVLDIKWNPFNDFEIASCSEDTTIKIWDIPKQLLTKNLTACKKELIG 151

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL-----TLGSDVHPDTIYSVDW 700
            HT+RVG+V WHPTA N+L S+G D  ++VW++ T  +V+     T+G   H   I S+ +
Sbjct: 152  HTRRVGLVEWHPTAANILFSSGYDYKVMVWNLDTKESVIMNPVRTIG--CHQGVILSMSF 209

Query: 701  SRDGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSD-GKILTTGFSRMS 877
            + +G+L+ T+C+D+++RI++PR G ++ E +    G R  + +F+ D  K+L+TG SR +
Sbjct: 210  NTNGSLLATTCKDRKIRILDPRAGAVLQEAN--CTGHRANKVLFLGDLNKLLSTGTSRWN 267

Query: 878  ERQVALWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPF 1057
             RQ+A+WD  +L  PLS  +LD SSGVL PF+  +  ++Y+ GKGD +IRY+E+++  P 
Sbjct: 268  NRQLAVWDQDNLSVPLSEVDLDGSSGVLFPFYDVDTNMLYVVGKGDGNIRYYEVSADKPH 327

Query: 1058 LHYLSMFSSQESQRGMGYMPKRGLEV 1135
            L YL+ + S   Q+G+G MPKRGL+V
Sbjct: 328  LSYLTEYRSLTPQKGIGIMPKRGLDV 353


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 51,880,669
Number of extensions: 1586155
Number of successful extensions: 8536
Number of sequences better than 1.0e-05: 84
Number of HSP's gapped: 8096
Number of HSP's successfully gapped: 110
Length of query: 380
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 276
Effective length of database: 15,407,560
Effective search space: 4252486560
Effective search space used: 4252486560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012149
         (1140 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001929380.1| PREDICTED: coronin-1C [Sus scrofa].               509   e-144
Alignment   gi|XP_003122508.2| PREDICTED: coronin-1B-like [Sus scrofa].          502   e-142
Alignment   gi|XP_003360880.1| PREDICTED: LOW QUALITY PROTEIN: coronin-1A-l...   338   3e-93
Alignment   gi|XP_003121805.1| PREDICTED: coronin-2B [Sus scrofa].               314   5e-86
Alignment   gi|XP_003122082.1| PREDICTED: coronin-2A-like [Sus scrofa].          307   6e-84
Alignment   gi|XP_003361333.1| PREDICTED: coronin-6-like [Sus scrofa].           304   7e-83
Alignment   gi|XP_003362227.1| PREDICTED: coronin-1C-like, partial [Sus scr...   263   1e-70
Alignment   gi|XP_003359180.1| PREDICTED: hypothetical protein LOC100620779...   178   6e-45
Alignment   gi|XP_003124691.2| PREDICTED: coronin-7-like [Sus scrofa].           176   3e-44
Alignment   gi|XP_003131831.2| PREDICTED: coronin-6-like [Sus scrofa].           171   9e-43

>ref|XP_001929380.1| PREDICTED: coronin-1C [Sus scrofa].
          Length = 474

 Score =  509 bits (1310), Expect = e-144
 Identities = 230/321 (71%), Positives = 281/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ  K DQCY+D+RVS+ TWDS FCAVNP+FVA+I EASGGGAFLVLPL KTGR
Sbjct: 9    KFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHKTGR 68

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK+ P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLTL L EPVV LEG
Sbjct: 69   IDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEG 128

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGIVAWHPTA+NVLLSAGCDN I++W+VGTG A++ L  D+H D IY+V W+R+G+
Sbjct: 129  HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINL-DDMHSDMIYNVSWNRNGS 187

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICT+ +DK+VR+I+PRK  I+AEK++ HEG RP+RA+F++DG + TTGFSRMSERQ+AL
Sbjct: 188  LICTASKDKKVRVIDPRKQEIIAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            W+ K +EEP++L E+DTS+GVLLPF+ P+  I+YLCGKGDSSIRYFEIT ++P++HYL+ 
Sbjct: 248  WNPKTMEEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYLNT 307

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMGYMPKRGL+VN
Sbjct: 308  FSSKEPQRGMGYMPKRGLDVN 328


>ref|XP_003122508.2| PREDICTED: coronin-1B-like [Sus scrofa].
          Length = 469

 Score =  502 bits (1293), Expect = e-142
 Identities = 226/321 (70%), Positives = 278/321 (86%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFLVLPLSKTGR
Sbjct: 10   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEG
Sbjct: 70   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEHGLTSPLTEPVVVLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGI+ WHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY++ W+R+G+
Sbjct: 130  HTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNISWNRNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+AL
Sbjct: 189  LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 248

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD  +  EP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT ++P++H+L+ 
Sbjct: 249  WDPVNFGEPMALQELDSSNGALLPFYDPDTNVVYVCGKGDSSIRYFEITDESPYIHFLNT 308

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 309  FTSKEPQRGMGSMPKRGLEVS 329


>ref|XP_003360880.1| PREDICTED: LOW QUALITY PROTEIN: coronin-1A-like, partial [Sus
           scrofa].
          Length = 400

 Score =  338 bits (867), Expect = 3e-93
 Identities = 172/207 (83%), Positives = 173/207 (83%), Gaps = 2/207 (0%)
 Frame = +2

Query: 218 CYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGRVDKNAPMVCGHTAP 397
           CYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGRVDKNAPMVCGHTAP
Sbjct: 51  CYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGRVDKNAPMVCGHTAP 110

Query: 398 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEGHTKRVGIVAW--HP 571
           VLDIAWCPHNDNVIASGSEDCTVMV     GG+ L          G  K  G   W  HP
Sbjct: 111 VLDIAWCPHNDNVIASGSEDCTVMV----SGGVVL----------GRGKAQGFXYWGHHP 156

Query: 572 TAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVR 751
                    GCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVR
Sbjct: 157 ---------GCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVR 207

Query: 752 IIEPRKGTIVAEKDRPHEGTRPVRAVF 832
           IIEPRKGTIVAEKDRPHEGTRPVRAVF
Sbjct: 208 IIEPRKGTIVAEKDRPHEGTRPVRAVF 234



 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 32/43 (74%), Positives = 33/43 (76%)
 Frame = +2

Query: 1010 GDSSIRYFEITSKAPFLHYLSMFSSQESQRGMGYMPKRGLEVN 1138
            GDSSIRYFEITS+APFLHYLSMF          YMPKRGLEVN
Sbjct: 235  GDSSIRYFEITSEAPFLHYLSMFXXXXXXXXXXYMPKRGLEVN 277


>ref|XP_003121805.1| PREDICTED: coronin-2B [Sus scrofa].
          Length = 480

 Score =  314 bits (805), Expect = 5e-86
 Identities = 148/322 (45%), Positives = 222/322 (68%), Gaps = 1/322 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFR+V+G+ A  + C++ + +++   D+ FCAVN +F+A++ E++GGG+FLV+PL +TGR
Sbjct: 16   KFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGR 75

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            ++ N P VCGH   VLDI W P  DN+IAS SED +V +WEIP+GGL   + E ++ L G
Sbjct: 76   IEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHG 135

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H++RVG+V WHPT  N+L SAG D  +L+W++  G  V  +  D H D I  + ++ DG+
Sbjct: 136  HSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMI--DCHSDVILCMSFNTDGS 193

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSERQVA 892
            L+ T+C+DK++R+IEPR G ++ E +  +   R  R VF+ + K +LTTG SR + RQ+A
Sbjct: 194  LLTTTCKDKKLRVIEPRSGRVLQEANCKNH--RVNRVVFLGNMKRLLTTGVSRWNTRQIA 251

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWD + L  PL   E+D  SG+L PF+  +  ++YL GKGD +IRY+EI+++ P+L YL 
Sbjct: 252  LWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLM 311

Query: 1073 MFSSQESQRGMGYMPKRGLEVN 1138
             F S   Q+G+G MPK GL+V+
Sbjct: 312  EFRSPAPQKGLGVMPKHGLDVS 333


>ref|XP_003122082.1| PREDICTED: coronin-2A-like [Sus scrofa].
          Length = 525

 Score =  307 bits (787), Expect = 6e-84
 Identities = 145/325 (44%), Positives = 222/325 (68%), Gaps = 4/325 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFG+PA  + CY+ V ++++  D+ FCAVNP F+A++ E +GGGAFLV+PL +TG+
Sbjct: 11   KFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGK 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +D + P VCGH   VLD+ W P +D  IAS SED T+ +W+IP   +T  L      L G
Sbjct: 71   LDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWDIPKQLMTKNLTACKKELVG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL---TLGSDVHPDTIYSVDWSR 706
            H +RVG+V WHPTA N+L S+G D  ++VW++ T  +V+         H D I S+ ++ 
Sbjct: 131  HARRVGLVEWHPTAANILFSSGYDYKVMVWNLDTKESVIMSPVRTITCHQDVILSMSFNT 190

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSD-GKILTTGFSRMSER 883
            +G+L+ T+C+D+++R+++PR G ++ E    ++G R  + +F+ +  K+L+TG SR + R
Sbjct: 191  NGSLLATACKDRKIRVLDPRAGAVLQEAS--YKGHRANKVLFLGNLKKLLSTGTSRWNNR 248

Query: 884  QVALWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLH 1063
            Q+ALWD   L  PL+  +LD SSGVL PF+ P+  ++Y+ GKGD +IRY+E+++  P L+
Sbjct: 249  QMALWDQDDLSVPLTEEDLDGSSGVLFPFYDPDTNMLYVVGKGDGNIRYYEVSADKPHLN 308

Query: 1064 YLSMFSSQESQRGMGYMPKRGLEVN 1138
            YL+ + S   Q+G+G MPKRGLEV+
Sbjct: 309  YLTEYRSYNPQKGIGVMPKRGLEVS 333


>ref|XP_003361333.1| PREDICTED: coronin-6-like [Sus scrofa].
          Length = 570

 Score =  304 bits (778), Expect = 7e-83
 Identities = 148/250 (59%), Positives = 185/250 (74%), Gaps = 8/250 (3%)
 Frame = +2

Query: 176 KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
           KFRHVFGQ AKADQ YED+RVS+ TWDS FCAVNPKF+A+I EA GGGAF+VLPL+KTGR
Sbjct: 10  KFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGR 69

Query: 356 VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
           VDKN P+V GHTAPVLDI WCPHNDNVIAS S+D T+MVW+IPD      + EP++TLEG
Sbjct: 70  VDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITEPIITLEG 129

Query: 536 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
           H+KRVGI++WHPTA+NVLLSAG DNVI++W+VGTG  +L+L  D+HPD I+S       +
Sbjct: 130 HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSL-DDIHPDVIHSXXXXXXXS 188

Query: 716 LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGT--------RPVRAVFVSDGKILTTGFSR 871
           L+ T+C+DK +RII+PRKG +VA + R              P RAV          G + 
Sbjct: 189 LLATTCKDKTLRIIDPRKGQVVAARPRREHALAPSLGQPGAPSRAVAAPKRAEAEQG-AP 247

Query: 872 MSERQVALWD 901
           + +R++ LWD
Sbjct: 248 VCQRELGLWD 257



 Score =  103 bits (258), Expect = 1e-22
 Identities = 46/63 (73%), Positives = 56/63 (88%)
 Frame = +2

Query: 950  SGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSMFSSQESQRGMGYMPKRGL 1129
            +GVLLPF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ FSS+E QRGMG+MPKRGL
Sbjct: 378  NGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHYLNTFSSKEPQRGMGFMPKRGL 437

Query: 1130 EVN 1138
            +V+
Sbjct: 438  DVS 440


>ref|XP_003362227.1| PREDICTED: coronin-1C-like, partial [Sus scrofa].
          Length = 332

 Score =  263 bits (673), Expect = 1e-70
 Identities = 116/183 (63%), Positives = 157/183 (85%)
 Frame = +2

Query: 590  LSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVRIIEPRK 769
            L +GCDN I++W+VGTG A++ L  D+H D IY+V W+R+G+LICT+ +DK+VR+I+PRK
Sbjct: 5    LLSGCDNAIIIWNVGTGEALINL-DDMHSDMIYNVSWNRNGSLICTASKDKKVRVIDPRK 63

Query: 770  GTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVALWDTKHLEEPLSLAELDTS 949
              I+ EK++ HEG RP+RA+F++DG + TTGFSRMSERQ+ALW+ K +EEP++L E+DTS
Sbjct: 64   QEIIQEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLALWNPKTMEEPIALHEMDTS 123

Query: 950  SGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSMFSSQESQRGMGYMPKRGL 1129
            +GVLLPF+ P+  I+YLCGKGDSSIRYFEIT ++P++HYL+ FSS+E QRGMGYMPKRGL
Sbjct: 124  NGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYLNTFSSKEPQRGMGYMPKRGL 183

Query: 1130 EVN 1138
            +VN
Sbjct: 184  DVN 186


>ref|XP_003359180.1| PREDICTED: hypothetical protein LOC100620779 [Sus scrofa].
          Length = 442

 Score =  178 bits (451), Expect = 6e-45
 Identities = 80/99 (80%), Positives = 87/99 (87%)
 Frame = +2

Query: 176 KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
           KFRHVFGQ  K DQCY+D+RVS+ TWDS FCAVNP+FVA+I EASGGGAFLVLPL KTGR
Sbjct: 34  KFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHKTGR 93

Query: 356 VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMV 472
           +DK+ P VCGHT PVLDI WCPHND VIASGSEDCTVMV
Sbjct: 94  IDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMV 132


>ref|XP_003124691.2| PREDICTED: coronin-7-like [Sus scrofa].
          Length = 928

 Score =  176 bits (445), Expect = 3e-44
 Identities = 109/325 (33%), Positives = 163/325 (50%), Gaps = 5/325 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTW---DSGFCAVNPKFVALICEASGGGAFLVLPLSK 346
            KFRH  G     D    +++    T      GFCA   +    +   S GG   VL L K
Sbjct: 475  KFRHTQGTVLHRDSHITNLKGLNLTTPGESDGFCANRLRVAVPLL--SSGGQVAVLELRK 532

Query: 347  TGRVDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVT 526
             GR+   A     + A V D+AW P + + +A   ED  + +W +P  GL   L  P   
Sbjct: 533  PGRLPDTALPTLQNGAAVTDLAWDPFDLHRLAVAGEDARIRLWRVPPEGLEEVLTTPEAV 592

Query: 527  LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSR 706
            L GHT+++  + +HP A +VL S+  D  I +WD+  G   L L    H D I+ + WS 
Sbjct: 593  LTGHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQAGVERLRLQG--HRDQIFGLAWSP 650

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSER 883
            +G  + T C+D R+R+ EPR      ++    EG R  R V+V DG  +L +GF   SER
Sbjct: 651  NGQQLATVCKDGRLRVYEPRSSPEPLQEGPGPEGARGARVVWVCDGHCLLVSGFDSRSER 710

Query: 884  QVALWDTKHLEE-PLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFL 1060
            Q+ L+  + L   PL++  LD +   LLP + P+  +V L GKGD+ +  +E+  +APF 
Sbjct: 711  QLLLFSAEALASGPLAVLGLDVAPSTLLPSYDPDTSLVLLTGKGDTRVFLYELLPEAPFF 770

Query: 1061 HYLSMFSSQESQRGMGYMPKRGLEV 1135
               + F+S +  +G   +PK   EV
Sbjct: 771  LECNSFTSPDPHKGFVLLPKTECEV 795



 Score =  156 bits (394), Expect = 2e-38
 Identities = 97/326 (29%), Positives = 163/326 (50%), Gaps = 6/326 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRH   +P + +    D+R             +   +A I +  G     ++PL   G 
Sbjct: 8    KFRHTEARPPRREAWISDIRAGTAPSCGNHIKSSCSLIAFISDRPG--VLGIVPLEGQGE 65

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
              ++   +  H+  V D+ + P +D ++A+ S D TV +W +P  G  LP   P + L  
Sbjct: 66   DKRHVTHLGCHSDLVTDLDFSPFDDFLLATASADRTVKLWRLPAPGQALP-SGPGLVLGP 124

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
                V ++ +HP+A  VLLSA     + VWD      +  L +  H D + S  WS+DGA
Sbjct: 125  EDVPVEVLQFHPSADGVLLSAA-GKALKVWDAARQQPLTELAA--HGDLVQSAIWSQDGA 181

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSERQVA 892
            L+ T+C+DK++RI +PR     ++  + HE +R  R V+    + +++TGF++M ER+V 
Sbjct: 182  LVGTTCKDKQLRIFDPRAKPEASQSTQAHENSRDGRLVWTGTREHLVSTGFNQMREREVK 241

Query: 893  LWDTKHLEEPLSLAELDTSS-----GVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPF 1057
            LWD +     L+   LD S      G L+P   P+  ++ L GKG+S +  +E+  + P 
Sbjct: 242  LWDIRLFSGALASLTLDASPRYERLGSLMPLLDPDSGLLVLAGKGESQLSCYEVAPQQPV 301

Query: 1058 LHYLSMFSSQESQRGMGYMPKRGLEV 1135
            L  ++    + + RG   +P+R L V
Sbjct: 302  LSPVTQCLLESALRGAALVPRRALAV 327


>ref|XP_003131831.2| PREDICTED: coronin-6-like [Sus scrofa].
          Length = 381

 Score =  171 bits (432), Expect = 9e-43
 Identities = 77/118 (65%), Positives = 98/118 (83%)
 Frame = +2

Query: 785  EKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVALWDTKHLEEPLSLAELDTSSGVLL 964
            E+   HEG RP+RAVF   G+I TTGF+RMS+R++ LWD  + EEP++L E+DTS+GVLL
Sbjct: 121  ERFAAHEGMRPMRAVFTRQGQIFTTGFTRMSQRELGLWDPNNFEEPVALQEMDTSNGVLL 180

Query: 965  PFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSMFSSQESQRGMGYMPKRGLEVN 1138
            PF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ FSS+E QRGMG+MPKRGL+V+
Sbjct: 181  PFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHYLNTFSSKEPQRGMGFMPKRGLDVS 238


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,770,583
Number of extensions: 1082510
Number of successful extensions: 5354
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 5145
Number of HSP's successfully gapped: 64
Length of query: 380
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 279
Effective length of database: 8,829,335
Effective search space: 2463384465
Effective search space used: 2463384465
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012149
         (1140 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_034028.1| coronin-1A [Mus musculus].                           636   0.0  
Alignment   gi|NP_035909.2| coronin-1C [Mus musculus].                           510   e-145
Alignment   gi|NP_035908.1| coronin-1B [Mus musculus].                           504   e-143
Alignment   gi|NP_624354.1| coronin-6 isoform A [Mus musculus].                  488   e-138
Alignment   gi|NP_624356.1| coronin-6 isoform B [Mus musculus].                  471   e-133
Alignment   gi|NP_624355.1| coronin-6 isoform C [Mus musculus].                  404   e-113
Alignment   gi|NP_780693.2| coronin-2B [Mus musculus].                           315   4e-86
Alignment   gi|NP_001158276.1| coronin-2A [Mus musculus].                        305   4e-83
Alignment   gi|NP_849224.1| coronin-2A [Mus musculus].                           305   4e-83
Alignment   gi|NP_084481.3| coronin-7 [Mus musculus].                            181   9e-46

>ref|NP_034028.1| coronin-1A [Mus musculus].
          Length = 461

 Score =  636 bits (1641), Expect = 0.0
 Identities = 303/321 (94%), Positives = 312/321 (97%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKF+ALICEASGGGAFLVLPL KTGR
Sbjct: 10   KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN P+VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL LPLREPV+TLEG
Sbjct: 70   VDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG DVHPDTIYSVDWSRDGA
Sbjct: 130  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGA 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICTSCRDKRVR+IEPRKGT+VAEKDRPHEGTRPV AVFVS+GKILTTGFSRMSERQVAL
Sbjct: 190  LICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WDTKHLEEPLSL ELDTSSGVLLPFF P+  IVYLCGKGDSSIRYFEITS+APFLHYLSM
Sbjct: 250  WDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+ESQRGMGYMPKRGLEVN
Sbjct: 310  FSSKESQRGMGYMPKRGLEVN 330


>ref|NP_035909.2| coronin-1C [Mus musculus].
          Length = 474

 Score =  510 bits (1314), Expect = e-145
 Identities = 231/321 (71%), Positives = 282/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ  K DQCY+D+RVS+ TWDS FCAVNP+FVA+I EASGGGAFLVLPL KTGR
Sbjct: 9    KFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHKTGR 68

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK+ P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLTL L EPVV LEG
Sbjct: 69   IDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEG 128

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGIVAWHPTA+NVLLSAGCDN I++W+VGTG A++ L  D+H D IY+V WSR+G+
Sbjct: 129  HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINL-DDMHSDMIYNVSWSRNGS 187

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICT+ +DK+VR+I+PRK  IVAEK++ HEG RP+RA+F++DG + TTGFSRMSERQ+AL
Sbjct: 188  LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            W+ K+++EP++L E+DTS+GVLLPF+ P+  I+YLCGKGDSSIRYFEIT ++P++HYL+ 
Sbjct: 248  WNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYLNT 307

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMGYMPKRGL+VN
Sbjct: 308  FSSKEPQRGMGYMPKRGLDVN 328


>ref|NP_035908.1| coronin-1B [Mus musculus].
          Length = 484

 Score =  504 bits (1298), Expect = e-143
 Identities = 226/321 (70%), Positives = 279/321 (86%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAF+VLPL+KTGR
Sbjct: 11   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFMVLPLNKTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEG
Sbjct: 71   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGI+ WHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY+V W+ +G+
Sbjct: 131  HTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNVSWNHNGS 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+AL
Sbjct: 190  LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD ++LEEP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT + P++H+L+ 
Sbjct: 250  WDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPPYIHFLNT 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 310  FTSKEPQRGMGSMPKRGLEVS 330


>ref|NP_624354.1| coronin-6 isoform A [Mus musculus].
          Length = 471

 Score =  488 bits (1257), Expect = e-138
 Identities = 225/321 (70%), Positives = 276/321 (85%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ AKADQ YED+RVS+ TWDS FCAVNPKF+A+I EA GGGAF+VLPL+KTGR
Sbjct: 10   KFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN P+V GHT PVLDI WCPHNDNVIAS S+D TVMVW+IPD      + EPV+TLEG
Sbjct: 70   VDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPVITLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGI++WHPTA+NVLLSAG DNVI++W+VGTG  +L+L  D+HPD I+SV W+ +G+
Sbjct: 130  HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSL-DDIHPDVIHSVCWNSNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L+ T+C+DK +RII+PRK  +VAE+ RPHEG RP+RAVF +DGK+L+TGFSRMSERQ+AL
Sbjct: 189  LLATTCKDKTLRIIDPRKSQVVAERARPHEGARPLRAVFTADGKLLSTGFSRMSERQLAL 248

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD  + EEP++L E+DTS+GVLLPF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ 
Sbjct: 249  WDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHYLNT 308

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMG+MPKRGL+V+
Sbjct: 309  FSSKEPQRGMGFMPKRGLDVS 329


>ref|NP_624356.1| coronin-6 isoform B [Mus musculus].
          Length = 471

 Score =  471 bits (1212), Expect = e-133
 Identities = 218/321 (67%), Positives = 269/321 (83%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ AKADQ YED+RVS+ TWDS FCAVNPKF+A+I EA GGGAF+VLPL+KTGR
Sbjct: 10   KFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN P+V GHT PVLDI WCPHNDNVIAS S+D TVMVW+IPD      + EPV+TLEG
Sbjct: 70   VDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPVITLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGI++WHPTA+NVLLSAG DNVI++W+VGTG  +L+L  D+HPD I+SV W+ +G+
Sbjct: 130  HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSL-DDIHPDVIHSVCWNSNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L+ T+C+DK +RII+PRK  +VAE+   HEG RP+RAVF   G I TTGF+RMS+R++ L
Sbjct: 189  LLATTCKDKTLRIIDPRKSQVVAERFAAHEGMRPMRAVFTRLGHIFTTGFTRMSQRELGL 248

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD  + EEP++L E+DTS+GVLLPF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ 
Sbjct: 249  WDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHYLNT 308

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMG+MPKRGL+V+
Sbjct: 309  FSSKEPQRGMGFMPKRGLDVS 329


>ref|NP_624355.1| coronin-6 isoform C [Mus musculus].
          Length = 431

 Score =  404 bits (1038), Expect = e-113
 Identities = 195/321 (60%), Positives = 240/321 (74%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ AKADQ YED+RVS+ TWDS FCAVNPKF+A+I EA GGGAF+VLPL+KTGR
Sbjct: 10   KFRHVFGQAAKADQAYEDIRVSKVTWDSAFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN P+V GHT PVLDI WCPHNDNVIAS S+D TVMVW+IPD      + EPV+TLEG
Sbjct: 70   VDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPVITLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGI++WHPTA+NVLLSAG DNVI++W+VGTG  +L+L  D+HPD I+SV W+ +G+
Sbjct: 130  HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSL-DDIHPDVIHSVCWNSNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L+ T+C+DK +RII+PRK  +VA                                     
Sbjct: 189  LLATTCKDKTLRIIDPRKSQVVA------------------------------------- 211

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
                + EEP++L E+DTS+GVLLPF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ 
Sbjct: 212  ---NNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHYLNT 268

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMG+MPKRGL+V+
Sbjct: 269  FSSKEPQRGMGFMPKRGLDVS 289


>ref|NP_780693.2| coronin-2B [Mus musculus].
          Length = 480

 Score =  315 bits (807), Expect = 4e-86
 Identities = 148/322 (45%), Positives = 222/322 (68%), Gaps = 1/322 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFR+V+G+ A  + C++ + +++   D+ FCAVN +F+A++ E++GGG+FLV+PL +TGR
Sbjct: 16   KFRNVYGKAANREHCFDGIPITKNVHDNHFCAVNARFLAIVTESAGGGSFLVIPLEQTGR 75

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            ++ N P VCGH   VLDI W P  DN+IAS SED +V +WEIPDGGL   + E ++ L G
Sbjct: 76   IEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPDGGLKRNMTEALLELHG 135

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H++RVG+V WHPT  N+L SAG D  +L+W++  G  V  +  D H D I  + ++ DG+
Sbjct: 136  HSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDIGEPVKMI--DCHTDVILCMSFNTDGS 193

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSERQVA 892
            L+ T+C+DK++R+IEPR G ++ E +  +   R  R VF+ + K +LTTG SR + RQ+A
Sbjct: 194  LLTTTCKDKKLRVIEPRSGRVLQEANCKNH--RVNRVVFLGNMKRLLTTGVSRWNTRQIA 251

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWD + L  P+   E+D  SG+L PF+  +  ++YL GKGD +IRY+EI+++ P+L YL 
Sbjct: 252  LWDQEDLSMPMIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLM 311

Query: 1073 MFSSQESQRGMGYMPKRGLEVN 1138
             F S   Q+G+G MPK GL+V+
Sbjct: 312  EFRSPAPQKGLGVMPKHGLDVS 333


>ref|NP_001158276.1| coronin-2A [Mus musculus].
          Length = 524

 Score =  305 bits (781), Expect = 4e-83
 Identities = 148/325 (45%), Positives = 221/325 (68%), Gaps = 4/325 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHV+G+PA  + CY+ V ++++  D+ FCAVNP F+A++ E +GGGAFLV+PL +TG+
Sbjct: 11   KFRHVYGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGK 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +D + P VCGH   VLDI W P ND  IAS SED T+ +W IP   LT  L      L G
Sbjct: 71   LDPHYPKVCGHRGNVLDIKWNPFNDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKELIG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL---TLGSDVHPDTIYSVDWSR 706
            H +RVG+V WHPT  N+L SAG D  ++VW++ T  +V+       + H D I S+ ++ 
Sbjct: 131  HARRVGLVEWHPTTANILFSAGYDYKVMVWNLDTKDSVIAGPVKTINCHQDVILSMSFNT 190

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFV-SDGKILTTGFSRMSER 883
            +G+L+ T+C+D+++RI++PR G ++ E    ++G R  + +F+ S  K+L+TG SR + R
Sbjct: 191  NGSLLATTCKDRKIRIVDPRLGIVLQEAS--YKGHRANKVLFLGSLKKLLSTGTSRWNNR 248

Query: 884  QVALWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLH 1063
            Q+ALWD ++L  PL+  +LD SSGVL PFF  +  ++Y+ GKGD +IRY+E++ + P L 
Sbjct: 249  QMALWDQENLSVPLTEEDLDGSSGVLFPFFDSDTSMLYIVGKGDGNIRYYEVSMEKPHLT 308

Query: 1064 YLSMFSSQESQRGMGYMPKRGLEVN 1138
            YL+ + S   Q+G+G MPKRGL+V+
Sbjct: 309  YLTEYRSYNPQKGIGIMPKRGLDVS 333


>ref|NP_849224.1| coronin-2A [Mus musculus].
          Length = 524

 Score =  305 bits (781), Expect = 4e-83
 Identities = 148/325 (45%), Positives = 221/325 (68%), Gaps = 4/325 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHV+G+PA  + CY+ V ++++  D+ FCAVNP F+A++ E +GGGAFLV+PL +TG+
Sbjct: 11   KFRHVYGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGK 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +D + P VCGH   VLDI W P ND  IAS SED T+ +W IP   LT  L      L G
Sbjct: 71   LDPHYPKVCGHRGNVLDIKWNPFNDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKELIG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL---TLGSDVHPDTIYSVDWSR 706
            H +RVG+V WHPT  N+L SAG D  ++VW++ T  +V+       + H D I S+ ++ 
Sbjct: 131  HARRVGLVEWHPTTANILFSAGYDYKVMVWNLDTKDSVIAGPVKTINCHQDVILSMSFNT 190

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFV-SDGKILTTGFSRMSER 883
            +G+L+ T+C+D+++RI++PR G ++ E    ++G R  + +F+ S  K+L+TG SR + R
Sbjct: 191  NGSLLATTCKDRKIRIVDPRLGIVLQEAS--YKGHRANKVLFLGSLKKLLSTGTSRWNNR 248

Query: 884  QVALWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLH 1063
            Q+ALWD ++L  PL+  +LD SSGVL PFF  +  ++Y+ GKGD +IRY+E++ + P L 
Sbjct: 249  QMALWDQENLSVPLTEEDLDGSSGVLFPFFDSDTSMLYIVGKGDGNIRYYEVSMEKPHLT 308

Query: 1064 YLSMFSSQESQRGMGYMPKRGLEVN 1138
            YL+ + S   Q+G+G MPKRGL+V+
Sbjct: 309  YLTEYRSYNPQKGIGIMPKRGLDVS 333


>ref|NP_084481.3| coronin-7 [Mus musculus].
          Length = 922

 Score =  181 bits (459), Expect = 9e-46
 Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 5/325 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTW---DSGFCAVNPKFVALICEASGGGAFLVLPLSK 346
            KFRH  G     D    +++    T      GFCA   +    +   S GG   VL L K
Sbjct: 469  KFRHTQGSLLHRDSHITNLKGLNLTTPGESDGFCANRLRVAVPLL--SSGGQVAVLELQK 526

Query: 347  TGRVDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVT 526
             GR+   A     +   V+D+ W P + + +A   ED  + +W +P GGL   L  P   
Sbjct: 527  PGRLPDTALPTLQNGTAVMDLVWDPFDPHRLAVAGEDARIRLWRVPPGGLENVLTTPETV 586

Query: 527  LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSR 706
            L GHT+++  + +HP A +VL S+  D  + +WD+ TGA  L L    H D I+S+ WS 
Sbjct: 587  LTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQTGAERLKLQG--HQDQIFSLAWSP 644

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSER 883
            DG  + T C+D  VR+ EPR   +  ++    EG R  R V+V DG  +L +GF   SER
Sbjct: 645  DGKQLATVCKDGHVRVYEPRSSPLPLQEGPGPEGGRGARIVWVCDGGCLLVSGFDSRSER 704

Query: 884  QVALWDTKHLEE-PLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFL 1060
            Q+ L+    L + P +L  LD +   LLP + P+  +V L GKGD+ +  +E+  +APF 
Sbjct: 705  QLQLYIADALAQGPSALLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYEVLPEAPFF 764

Query: 1061 HYLSMFSSQESQRGMGYMPKRGLEV 1135
               + F+S +  +G   +PK   ++
Sbjct: 765  LECNSFTSPDPHKGFVLLPKTECDI 789



 Score =  164 bits (415), Expect = 1e-40
 Identities = 97/321 (30%), Positives = 162/321 (50%), Gaps = 1/321 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRH+  +P++ +    D+R   T         +   +A    +   G   V+ L     
Sbjct: 8    KFRHMEARPSRREAWISDIRAVTTPTCGNHIKSSCSLIAF--NSDRPGVLGVISLEGHEE 65

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
              ++   +  H+  V D+ + P +D ++ASGS D T+ +W +   G  LP   P V L  
Sbjct: 66   NKRHVTYLGCHSDLVTDLDFSPFDDFLLASGSADRTIKLWRLSGTGEALP-SVPGVVLGP 124

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
                V ++ +HPT   VL+S      + VWDV     +  L  + H D + S  WSRDGA
Sbjct: 125  EELPVEVLQFHPTVDGVLVSTA-GKTVKVWDVAKQQPLTEL--EAHKDLVQSAVWSRDGA 181

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVS-DGKILTTGFSRMSERQVA 892
            ++ T+C+DK++RI +PR  T  ++  + HE  R +R  +      +++TGF++M ER+  
Sbjct: 182  IVGTACKDKQLRIFDPRARTQASQSTQAHENNRDIRLAWTGIQEHLVSTGFNQMREREAK 241

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWDT+     L+   LDTS G L+P   P+  ++ L GKG++ +  +E+T + P L  ++
Sbjct: 242  LWDTRLFSSALASVTLDTSPGPLIPLLDPDSGLLVLAGKGENQLYCYEVTPQQPALSPVT 301

Query: 1073 MFSSQESQRGMGYMPKRGLEV 1135
                +   RG   +P+R L V
Sbjct: 302  QCILENVLRGAALVPRRALAV 322


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 42,804,715
Number of extensions: 1279189
Number of successful extensions: 6309
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 6024
Number of HSP's successfully gapped: 76
Length of query: 380
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 277
Effective length of database: 12,523,851
Effective search space: 3469106727
Effective search space used: 3469106727
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012149
         (1140 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001180262.1| coronin-1A [Homo sapiens].                        632   0.0  
Alignment   gi|NP_009005.1| coronin-1A [Homo sapiens].                           632   0.0  
Alignment   gi|NP_055140.1| coronin-1C isoform 1 [Homo sapiens].                 509   e-144
Alignment   gi|NP_001018080.1| coronin-1B [Homo sapiens].                        508   e-144
Alignment   gi|NP_065174.1| coronin-1B [Homo sapiens].                           508   e-144
Alignment   gi|NP_116243.2| coronin-6 [Homo sapiens].                            474   e-134
Alignment   gi|NP_006082.3| coronin-2B isoform 1 [Homo sapiens].                 314   8e-86
Alignment   gi|NP_001177386.1| coronin-2B isoform 2 [Homo sapiens].              314   8e-86
Alignment   gi|NP_001177385.1| coronin-2B isoform 2 [Homo sapiens].              314   8e-86
Alignment   gi|NP_003380.3| coronin-2A [Homo sapiens].                           309   3e-84

>ref|NP_001180262.1| coronin-1A [Homo sapiens].
          Length = 461

 Score =  632 bits (1630), Expect = 0.0
 Identities = 303/321 (94%), Positives = 311/321 (96%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPL KTGR
Sbjct: 10   KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLGKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKNAP VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL LPLREPVVTLEG
Sbjct: 70   VDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVVTLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIVAWH TAQNVLLSAGCDNVI+VWDVGTGAA+LTLG +VHPDTIYSVDWSRDG 
Sbjct: 130  HTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDVGTGAAMLTLGPEVHPDTIYSVDWSRDGG 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICTSCRDKRVRIIEPRKGT+VAEKDRPHEGTRPVRAVFVS+GKILTTGFSRMSERQVAL
Sbjct: 190  LICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WDTKHLEEPLSL ELDTSSGVLLPFF P+  IVYLCGKGDSSIRYFEITS+APFLHYLSM
Sbjct: 250  WDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+ESQRGMGYMPKRGLEVN
Sbjct: 310  FSSKESQRGMGYMPKRGLEVN 330


>ref|NP_009005.1| coronin-1A [Homo sapiens].
          Length = 461

 Score =  632 bits (1630), Expect = 0.0
 Identities = 303/321 (94%), Positives = 311/321 (96%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPL KTGR
Sbjct: 10   KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLGKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKNAP VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL LPLREPVVTLEG
Sbjct: 70   VDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVVTLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGIVAWH TAQNVLLSAGCDNVI+VWDVGTGAA+LTLG +VHPDTIYSVDWSRDG 
Sbjct: 130  HTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDVGTGAAMLTLGPEVHPDTIYSVDWSRDGG 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICTSCRDKRVRIIEPRKGT+VAEKDRPHEGTRPVRAVFVS+GKILTTGFSRMSERQVAL
Sbjct: 190  LICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WDTKHLEEPLSL ELDTSSGVLLPFF P+  IVYLCGKGDSSIRYFEITS+APFLHYLSM
Sbjct: 250  WDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+ESQRGMGYMPKRGLEVN
Sbjct: 310  FSSKESQRGMGYMPKRGLEVN 330


>ref|NP_055140.1| coronin-1C isoform 1 [Homo sapiens].
          Length = 474

 Score =  509 bits (1311), Expect = e-144
 Identities = 230/321 (71%), Positives = 282/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ  K DQCY+D+RVS+ TWDS FCAVNP+FVA+I EASGGGAFLVLPL KTGR
Sbjct: 9    KFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHKTGR 68

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK+ P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLTL L EPVV LEG
Sbjct: 69   IDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVILEG 128

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGIVAWHPTA+NVLLSAGCDN I++W+VGTG A++ L  D+H D IY+V W+R+G+
Sbjct: 129  HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINL-DDMHSDMIYNVSWNRNGS 187

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            LICT+ +DK+VR+I+PRK  IVAEK++ HEG RP+RA+F++DG + TTGFSRMSERQ+AL
Sbjct: 188  LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            W+ K+++EP++L E+DTS+GVLLPF+ P+  I+YLCGKGDSSIRYFEIT ++P++HYL+ 
Sbjct: 248  WNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYLNT 307

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMGYMPKRGL+VN
Sbjct: 308  FSSKEPQRGMGYMPKRGLDVN 328


>ref|NP_001018080.1| coronin-1B [Homo sapiens].
          Length = 489

 Score =  508 bits (1307), Expect = e-144
 Identities = 229/321 (71%), Positives = 280/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFLVLPLSKTGR
Sbjct: 11   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEG
Sbjct: 71   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGI+AWHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY+V W+ +G+
Sbjct: 131  HTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNVSWNHNGS 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+AL
Sbjct: 190  LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD ++LEEP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT + P++H+L+ 
Sbjct: 250  WDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITEEPPYIHFLNT 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 310  FTSKEPQRGMGSMPKRGLEVS 330


>ref|NP_065174.1| coronin-1B [Homo sapiens].
          Length = 489

 Score =  508 bits (1307), Expect = e-144
 Identities = 229/321 (71%), Positives = 280/321 (87%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQP K DQCYED+RVS+ TWDS FCAVNPKF+A+I EASGGGAFLVLPLSKTGR
Sbjct: 11   KFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLPLSKTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +DK  P VCGHT PVLDI WCPHND VIASGSEDCTVMVW+IP+ GLT PL EPVV LEG
Sbjct: 71   IDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            HTKRVGI+AWHPTA+NVLLSAGCDNV+L+W+VGT   +  L S +HPD IY+V W+ +G+
Sbjct: 131  HTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDS-LHPDLIYNVSWNHNGS 189

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L C++C+DK VRII+PR+GT+VAE+++ HEG RP+RA+F++DGK+ TTGFSRMSERQ+AL
Sbjct: 190  LFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLAL 249

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD ++LEEP++L ELD+S+G LLPF+ P+  +VY+CGKGDSSIRYFEIT + P++H+L+ 
Sbjct: 250  WDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITEEPPYIHFLNT 309

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            F+S+E QRGMG MPKRGLEV+
Sbjct: 310  FTSKEPQRGMGSMPKRGLEVS 330


>ref|NP_116243.2| coronin-6 [Homo sapiens].
          Length = 472

 Score =  474 bits (1221), Expect = e-134
 Identities = 218/321 (67%), Positives = 271/321 (84%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFGQ AKADQ YED+RVS+ TWDS FCAVNPKF+A+I EA GGGAF+VLPL+KTGR
Sbjct: 10   KFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGR 69

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            VDKN P+V GHTAPVLDI WCPHNDNVIAS S+D T+MVW+IPD      + EP++TLEG
Sbjct: 70   VDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITEPIITLEG 129

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H+KRVGI++WHPTA+NVLLSAG DNVI++W+VGTG  +L+L  D+HPD I+SV W+ +G+
Sbjct: 130  HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSL-DDMHPDVIHSVCWNSNGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVAL 895
            L+ T+C+DK +RII+PRKG +VAE+   HEG RP+RAVF   G I TTGF+RMS+R++ L
Sbjct: 189  LLATTCKDKTLRIIDPRKGQVVAERFAAHEGMRPMRAVFTRQGHIFTTGFTRMSQRELGL 248

Query: 896  WDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLSM 1075
            WD  + EEP++L E+DTS+GVLLPF+ P+  IVYLCGKGDSSIRYFEIT + PF+HYL+ 
Sbjct: 249  WDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHYLNT 308

Query: 1076 FSSQESQRGMGYMPKRGLEVN 1138
            FSS+E QRGMG+MPKRGL+V+
Sbjct: 309  FSSKEPQRGMGFMPKRGLDVS 329


>ref|NP_006082.3| coronin-2B isoform 1 [Homo sapiens].
          Length = 480

 Score =  314 bits (805), Expect = 8e-86
 Identities = 148/322 (45%), Positives = 222/322 (68%), Gaps = 1/322 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFR+V+G+ A  + C++ + +++   D+ FCAVN +F+A++ E++GGG+FLV+PL +TGR
Sbjct: 16   KFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLVIPLEQTGR 75

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            ++ N P VCGH   VLDI W P  DN+IAS SED +V +WEIP+GGL   + E ++ L G
Sbjct: 76   IEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHG 135

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H++RVG+V WHPT  N+L SAG D  +L+W++  G  V  +  D H D I  + ++ DG+
Sbjct: 136  HSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMI--DCHTDVILCMSFNTDGS 193

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSERQVA 892
            L+ T+C+DK++R+IEPR G ++ E +  +   R  R VF+ + K +LTTG SR + RQ+A
Sbjct: 194  LLTTTCKDKKLRVIEPRSGRVLQEANCKNH--RVNRVVFLGNMKRLLTTGVSRWNTRQIA 251

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWD + L  PL   E+D  SG+L PF+  +  ++YL GKGD +IRY+EI+++ P+L YL 
Sbjct: 252  LWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLM 311

Query: 1073 MFSSQESQRGMGYMPKRGLEVN 1138
             F S   Q+G+G MPK GL+V+
Sbjct: 312  EFRSPAPQKGLGVMPKHGLDVS 333


>ref|NP_001177386.1| coronin-2B isoform 2 [Homo sapiens].
          Length = 475

 Score =  314 bits (805), Expect = 8e-86
 Identities = 148/322 (45%), Positives = 222/322 (68%), Gaps = 1/322 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFR+V+G+ A  + C++ + +++   D+ FCAVN +F+A++ E++GGG+FLV+PL +TGR
Sbjct: 11   KFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLVIPLEQTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            ++ N P VCGH   VLDI W P  DN+IAS SED +V +WEIP+GGL   + E ++ L G
Sbjct: 71   IEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H++RVG+V WHPT  N+L SAG D  +L+W++  G  V  +  D H D I  + ++ DG+
Sbjct: 131  HSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMI--DCHTDVILCMSFNTDGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSERQVA 892
            L+ T+C+DK++R+IEPR G ++ E +  +   R  R VF+ + K +LTTG SR + RQ+A
Sbjct: 189  LLTTTCKDKKLRVIEPRSGRVLQEANCKNH--RVNRVVFLGNMKRLLTTGVSRWNTRQIA 246

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWD + L  PL   E+D  SG+L PF+  +  ++YL GKGD +IRY+EI+++ P+L YL 
Sbjct: 247  LWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLM 306

Query: 1073 MFSSQESQRGMGYMPKRGLEVN 1138
             F S   Q+G+G MPK GL+V+
Sbjct: 307  EFRSPAPQKGLGVMPKHGLDVS 328


>ref|NP_001177385.1| coronin-2B isoform 2 [Homo sapiens].
          Length = 475

 Score =  314 bits (805), Expect = 8e-86
 Identities = 148/322 (45%), Positives = 222/322 (68%), Gaps = 1/322 (0%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFR+V+G+ A  + C++ + +++   D+ FCAVN +F+A++ E++GGG+FLV+PL +TGR
Sbjct: 11   KFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLVIPLEQTGR 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            ++ N P VCGH   VLDI W P  DN+IAS SED +V +WEIP+GGL   + E ++ L G
Sbjct: 71   IEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTEALLELHG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDVHPDTIYSVDWSRDGA 715
            H++RVG+V WHPT  N+L SAG D  +L+W++  G  V  +  D H D I  + ++ DG+
Sbjct: 131  HSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMI--DCHTDVILCMSFNTDGS 188

Query: 716  LICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGK-ILTTGFSRMSERQVA 892
            L+ T+C+DK++R+IEPR G ++ E +  +   R  R VF+ + K +LTTG SR + RQ+A
Sbjct: 189  LLTTTCKDKKLRVIEPRSGRVLQEANCKNH--RVNRVVFLGNMKRLLTTGVSRWNTRQIA 246

Query: 893  LWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLHYLS 1072
            LWD + L  PL   E+D  SG+L PF+  +  ++YL GKGD +IRY+EI+++ P+L YL 
Sbjct: 247  LWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLM 306

Query: 1073 MFSSQESQRGMGYMPKRGLEVN 1138
             F S   Q+G+G MPK GL+V+
Sbjct: 307  EFRSPAPQKGLGVMPKHGLDVS 328


>ref|NP_003380.3| coronin-2A [Homo sapiens].
          Length = 525

 Score =  309 bits (792), Expect = 3e-84
 Identities = 147/325 (45%), Positives = 221/325 (68%), Gaps = 4/325 (1%)
 Frame = +2

Query: 176  KFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLSKTGR 355
            KFRHVFG+PA  + CY+ V ++++  D+ FCAVNP F+A++ E +GGGAFLV+PL +TG+
Sbjct: 11   KFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGK 70

Query: 356  VDKNAPMVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPLREPVVTLEG 535
            +D + P VCGH   VLD+ W P +D  IAS SED T+ +W IP   LT  L      L G
Sbjct: 71   LDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVG 130

Query: 536  HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGSDV---HPDTIYSVDWSR 706
            H +RVG+V WHPTA N+L SAG D  +++W++ T  +V+T        H D I S+ ++ 
Sbjct: 131  HARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNT 190

Query: 707  DGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSD-GKILTTGFSRMSER 883
            +G+L+ T+C+D+++R+I+PR GT++ E    ++G R  + +F+ +  K+++TG SR + R
Sbjct: 191  NGSLLATTCKDRKIRVIDPRAGTVLQEAS--YKGHRASKVLFLGNLKKLMSTGTSRWNNR 248

Query: 884  QVALWDTKHLEEPLSLAELDTSSGVLLPFFTPEHKIVYLCGKGDSSIRYFEITSKAPFLH 1063
            QVALWD  +L  PL   +LD SSGVL PF+  +  ++Y+ GKGD +IRY+E+++  P L 
Sbjct: 249  QVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSADKPHLS 308

Query: 1064 YLSMFSSQESQRGMGYMPKRGLEVN 1138
            YL+ + S   Q+G+G MPKRGL+V+
Sbjct: 309  YLTEYRSYNPQKGIGVMPKRGLDVS 333


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 50,785,830
Number of extensions: 1536691
Number of successful extensions: 7969
Number of sequences better than 1.0e-05: 66
Number of HSP's gapped: 7598
Number of HSP's successfully gapped: 91
Length of query: 380
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 276
Effective length of database: 14,868,908
Effective search space: 4103818608
Effective search space used: 4103818608
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012149
         (1140 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GL892962.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...   375   e-101
Sscrofa_Chr02                                                          78   1e-11
gb|GL892945.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...    70   3e-09
gb|GL894036.2| Sus scrofa unplaced genomic scaffold ChrUScaf1920       66   5e-08

>gb|GL892962.1| Sus scrofa unplaced genomic scaffold chrU_scaffold1775
          Length = 17377

 Score =  375 bits (189), Expect = e-101
 Identities = 189/189 (100%)
 Strand = Plus / Plus

                                                                        
Query: 597  caggttgtgacaacgtgatcctggtgtgggacgtgggcactggggcggccgtgctgacgc 656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3392 caggttgtgacaacgtgatcctggtgtgggacgtgggcactggggcggccgtgctgacgc 3451

                                                                        
Query: 657  tgggctcggacgtgcacccggacacaatctacagcgtggactggagccgagacggcgccc 716
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3452 tgggctcggacgtgcacccggacacaatctacagcgtggactggagccgagacggcgccc 3511

                                                                        
Query: 717  tcatctgcacctcctgccgggacaagcgagttcgcatcattgagccccgcaaaggcacca 776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3512 tcatctgcacctcctgccgggacaagcgagttcgcatcattgagccccgcaaaggcacca 3571

                     
Query: 777  ttgtagcgg 785
            |||||||||
Sbjct: 3572 ttgtagcgg 3580



 Score =  264 bits (133), Expect = 1e-67
 Identities = 133/133 (100%)
 Strand = Plus / Plus

                                                                        
Query: 214  ccagtgctatgaggacgtgcgcgtctcacagaccacctgggacagtggcttctgtgctgt 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1581 ccagtgctatgaggacgtgcgcgtctcacagaccacctgggacagtggcttctgtgctgt 1640

                                                                        
Query: 274  caaccccaagttcgtggccttgatctgtgaggccagcgggggcggggccttcctggtact 333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1641 caaccccaagttcgtggccttgatctgtgaggccagcgggggcggggccttcctggtact 1700

                         
Query: 334  gcccctgagcaag 346
            |||||||||||||
Sbjct: 1701 gcccctgagcaag 1713



 Score =  254 bits (128), Expect = 9e-65
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                        
Query: 345  agactggccgtgtggacaagaatgcgcctatggtctgtggccacacggcgcccgtgctgg 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3096 agactggccgtgtggacaagaatgcgcctatggtctgtggccacacggcgcccgtgctgg 3155

                                                                        
Query: 405  acatcgcctggtgcccgcacaatgataacgtcattgccagtggctccgaagattgcacgg 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3156 acatcgcctggtgcccgcacaatgataacgtcattgccagtggctccgaagattgcacgg 3215

                    
Query: 465  tcatggtg 472
            ||||||||
Sbjct: 3216 tcatggtg 3223



 Score =  121 bits (61), Expect = 9e-25
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1008 agggtgacagctctatccggtacttcgagatcacttccaaagccccgttcctgcactatc 1067
            |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 4085 agggtgacagctctatccggtacttcgagatcacttccgaggccccgttcctgcactatc 4144

                         
Query: 1068 tgtctatgttcag 1080
            |||| ||||||||
Sbjct: 4145 tgtccatgttcag 4157



 Score =  109 bits (55), Expect = 3e-21
 Identities = 58/59 (98%)
 Strand = Plus / Plus

                                                                       
Query: 784  ggagaaggaccgtccccacgaggggacccggcccgtgcgagctgtgtttgtgtccgatg 842
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3736 ggagaaggaccgtccccacgaggggacccggcccgtgcgagctgtgtttgtgtctgatg 3794



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                              
Query: 145  caggatgagccggcaggtggtccgttccagcaag 178
            ||||||||||||||||||||||||||||||||||
Sbjct: 1447 caggatgagccggcaggtggtccgttccagcaag 1480



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 1108 ctacatgcccaagcgtggtctggaggtgaacaa 1140
            |||||||||||||||||||||||||||||||||
Sbjct: 4258 ctacatgcccaagcgtggtctggaggtgaacaa 4290


>Sscrofa_Chr02 
||          Length = 162569375

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                           
Query: 527     ctggagggccacaccaagcgcgtgggcatcgtggcctggcaccccacggcccagaacgtg 586
               |||||||| ||||||||||||||||||||| |  | |||||||| |||||||  ||||||
Sbjct: 3800900 ctggagggtcacaccaagcgcgtgggcatcatcacgtggcacccgacggcccgcaacgtg 3800959

                              
Query: 587     ctgctcagtgcaggt 601
               |||||||| ||||||
Sbjct: 3800960 ctgctcagcgcaggt 3800974



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                           
Query: 380     tgtggccacacggcgcccgtgctggacatcgcctggtgcccgcacaatgataacgtcatt 439
               ||||| |||||||  ||||| |||||||||| |||||| || ||||||||  | ||||| 
Sbjct: 3800663 tgtggacacacgggacccgtcctggacatcgactggtgtccccacaatgacgaagtcatc 3800722

                                                
Query: 440     gccagtggctccgaagattgcacggtcatggtg 472
               ||||| ||||| || || |||||||||||||||
Sbjct: 3800723 gccagcggctcggaggactgcacggtcatggtg 3800755



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                               
Query: 854     accaccggcttcagccgcatgagtgagcggcaggtggcgctgtgggac 901
               ||||| ||||||||||||||||| ||||||||| ||||||| ||||||
Sbjct: 3801418 accacaggcttcagccgcatgagcgagcggcagctggcgctctgggac 3801465


>gb|GL892945.1| Sus scrofa unplaced genomic scaffold chrU_scaffold176
          Length = 215

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                             
Query: 35 tcattgtcttgacgagagcatcctcagcgggcagt 69
          |||||||||||||||||||||||||||||||||||
Sbjct: 1  tcattgtcttgacgagagcatcctcagcgggcagt 35


>gb|GL894036.2| Sus scrofa unplaced genomic scaffold ChrUScaf1920
          Length = 87809

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                         
Query: 533   ggccacaccaagcgcgtgggcatcgtggcctggcaccccacggcccagaacgtgctgctc 592
             |||||| |||| || ||||||||| |  ||||||||||||| |||| |||||| ||||||
Sbjct: 85265 ggccactccaaacgtgtgggcatcctctcctggcaccccacagcccggaacgttctgctc 85206

                      
Query: 593   agtgcaggt 601
             |||||||||
Sbjct: 85205 agtgcaggt 85197


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 23,334,812
Number of extensions: 122
Number of successful extensions: 122
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 12
Length of query: 1140
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1119
Effective length of database: 2,808,413,156
Effective search space: 3142614321564
Effective search space used: 3142614321564
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)