BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012153
         (1581 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001069974.1| keratin 31 [Bos taurus].                          625   e-179
Alignment   gi|NP_001076993.1| keratin, type I cuticular Ha3-I [Bos taurus].     617   e-177
Alignment   gi|NP_001092569.1| keratin 31 [Bos taurus].                          615   e-176
Alignment   gi|NP_001069419.1| keratin, type I cuticular Ha4 [Bos taurus].       610   e-174
Alignment   gi|NP_001069541.1| keratin, type I cuticular Ha5 [Bos taurus].       534   e-151
Alignment   gi|NP_001179454.1| keratin, type I cuticular Ha6 [Bos taurus].       518   e-147
Alignment   gi|XP_002696035.1| PREDICTED: keratin 36 [Bos taurus].               518   e-147
Alignment   gi|NP_001094772.1| keratin, type I cuticular Ha2 [Bos taurus].       492   e-139
Alignment   gi|XP_002696066.1| PREDICTED: keratin 38-like [Bos taurus].          472   e-133
Alignment   gi|XP_592934.4| PREDICTED: keratin 38-like [Bos taurus].             472   e-133

>ref|NP_001069974.1| keratin 31 [Bos taurus].
          Length = 416

 Score =  625 bits (1612), Expect = e-179
 Identities = 324/402 (80%), Positives = 341/402 (84%), Gaps = 3/402 (0%)
 Frame = +3

Query: 54   MPYN-CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            M YN CLPNL                 G TLPGACNIPA V S NWFCEG+FNGNEKETM
Sbjct: 1    MSYNFCLPNLSFRSSCSSRPCVPPSCCGTTLPGACNIPANVGSCNWFCEGSFNGNEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLER+NA              PL+CPNYQSYFRTIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERENAELESRILERSQQQEPLLCPNYQSYFRTIEELQQKILCA 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLAADDFRTKY+TELGLRQLVESDIN LRR LDELTLCK+DLEAQV
Sbjct: 121  KSENARLVVQIDNAKLAADDFRTKYETELGLRQLVESDINGLRRILDELTLCKSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEEL+CLK NHE+EVN+LRSQLGDRLN+EVDAAPTVDLN VL+ETR+QYEALVETNR
Sbjct: 181  ESLKEELICLKSNHEEEVNTLRSQLGDRLNVEVDAAPTVDLNRVLNETRAQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            RDVEEW+ RQTEELNKQVVSSSEQLQS Q EIIELRRTVNALEVELQAQHNLRDSLENTL
Sbjct: 241  RDVEEWYIRQTEELNKQVVSSSEQLQSCQTEIIELRRTVNALEVELQAQHNLRDSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TETEARYS QLAQVQGLIGNVE+QLAEIR+DLERQNQEYQVLLDVRARLECEINTYRGLL
Sbjct: 301  TETEARYSCQLAQVQGLIGNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVSSSCTPCGPRTCFQSC 1250
            +SEDCKLP NPCATTNA  + I  C+SS CTPC P      C
Sbjct: 361  DSEDCKLPCNPCATTNACGKTITPCISSPCTPCAPAAPCTPC 402


>ref|NP_001076993.1| keratin, type I cuticular Ha3-I [Bos taurus].
          Length = 384

 Score =  617 bits (1592), Expect = e-177
 Identities = 318/400 (79%), Positives = 337/400 (84%)
 Frame = +3

Query: 66   CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLND 245
            CLPNL                 G TLPGACNIPA V S NWFCEG+FNG+EKETMQFLND
Sbjct: 6    CLPNLSFRSSCSSRPCVPSSCCGTTLPGACNIPANVGSCNWFCEGSFNGSEKETMQFLND 65

Query: 246  RLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENA 425
            RLASYLEKVRQLERDNA                         R +E  QQKIL+ K+ENA
Sbjct: 66   RLASYLEKVRQLERDNAELES---------------------RILERSQQKILANKAENA 104

Query: 426  RLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKE 605
            RLVVQIDNAKLAADDFRTKYQTELGLRQLVESDIN LRR LDELTLCK+DLEAQVESLKE
Sbjct: 105  RLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINGLRRILDELTLCKSDLEAQVESLKE 164

Query: 606  ELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEE 785
            EL+CLKQNHEQEVN+LRSQLGDRLN+EVDAAPTVDLN VL+ETR+QYEALVETNRRDVEE
Sbjct: 165  ELICLKQNHEQEVNTLRSQLGDRLNVEVDAAPTVDLNRVLNETRAQYEALVETNRRDVEE 224

Query: 786  WFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA 965
            W+ RQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA
Sbjct: 225  WYIRQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA 284

Query: 966  RYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDC 1145
            RYS QLAQVQGLIGNVE+QLAEIR+DLERQNQEYQVLLDVRARLECEINTYRGLL+SEDC
Sbjct: 285  RYSCQLAQVQGLIGNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRGLLDSEDC 344

Query: 1146 KLPSNPCATTNAQPIGHCVSSSCTPCGPRTCFQSCNTFGC 1265
            KLP NPCATTNA  +G CV++ CTPCGPR+ F  CNTFGC
Sbjct: 345  KLPCNPCATTNASSVGSCVTNPCTPCGPRSRFGPCNTFGC 384


>ref|NP_001092569.1| keratin 31 [Bos taurus].
          Length = 401

 Score =  615 bits (1587), Expect = e-176
 Identities = 321/403 (79%), Positives = 342/403 (84%), Gaps = 5/403 (1%)
 Frame = +3

Query: 66   CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLND 245
            CLPNL                 G TLPGACNIPA V S NWFCEG+FNG+EKETMQFLND
Sbjct: 6    CLPNLSFRSSCSSRPCVPSSCCGTTLPGACNIPANVGSCNWFCEGSFNGSEKETMQFLND 65

Query: 246  RLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENA 425
            RLASYLEKVRQLERDNA              PLVCPNYQSYFRTIEELQQKIL  KSENA
Sbjct: 66   RLASYLEKVRQLERDNAELESRILERSQQQEPLVCPNYQSYFRTIEELQQKILCSKSENA 125

Query: 426  RLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKE 605
            RLVVQIDNAKLA+DDFRTKY+TE+ LRQLVE+D+N LRR LDELTLCK+DLEA+VESLKE
Sbjct: 126  RLVVQIDNAKLASDDFRTKYETEVSLRQLVEADLNGLRRILDELTLCKSDLEARVESLKE 185

Query: 606  ELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEE 785
            EL+CLKQNHEQEVN+LRSQLGDRLN+EVDAAPTVDLN VL+ETR+QYEALVETNRRDVEE
Sbjct: 186  ELICLKQNHEQEVNTLRSQLGDRLNVEVDAAPTVDLNRVLNETRAQYEALVETNRRDVEE 245

Query: 786  WFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA 965
            W+ RQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA
Sbjct: 246  WYIRQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA 305

Query: 966  RYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDC 1145
            RYS QLAQVQGLIGNVE+QLAEIR+DLERQNQEYQVLLDVRARLECEINTYRGLL+SEDC
Sbjct: 306  RYSCQLAQVQGLIGNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRGLLDSEDC 365

Query: 1146 KLPSNPCATTNA--QPIGHCVSSSCTP---CGPRTCFQSCNTF 1259
            KLP NPCATTNA  +P   C+S+ C     CGP      CNTF
Sbjct: 366  KLPCNPCATTNACERP---CISNPCVSRARCGP------CNTF 399


>ref|NP_001069419.1| keratin, type I cuticular Ha4 [Bos taurus].
          Length = 391

 Score =  610 bits (1573), Expect = e-174
 Identities = 318/391 (81%), Positives = 335/391 (85%), Gaps = 1/391 (0%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPY+C LP L                +G TLPGACNIPA V S NWFCEG+FNGNEKETM
Sbjct: 1    MPYSCCLPTLSYRSSCSSRPCVPHSCRGTTLPGACNIPANVGSCNWFCEGSFNGNEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLERDNA              PL+CPNYQSYFRTIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERDNAELESRILERSQQQEPLLCPNYQSYFRTIEELQQKILCA 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSEN+RLV+QIDNAKLAADDFRTKY+TE  LRQLVESDINSLRR LDELTLCKADLEAQV
Sbjct: 121  KSENSRLVIQIDNAKLAADDFRTKYETERSLRQLVESDINSLRRILDELTLCKADLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELLCLK+NHE+E NSLRSQLGDRLN+EVDAAPTVDLN VL+ETR+QYEALVETNR
Sbjct: 181  ESLKEELLCLKKNHEEEANSLRSQLGDRLNVEVDAAPTVDLNRVLNETRAQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            RDVEEW+ RQTEELNKQVVSSSEQLQSYQAEIIELRR VNALEVELQAQHNLRDSLENTL
Sbjct: 241  RDVEEWYIRQTEELNKQVVSSSEQLQSYQAEIIELRRMVNALEVELQAQHNLRDSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TETEARYS QLAQVQGLIGNVE+QLAEIR+DLERQNQEYQVLLDVRARLECEINTYRGLL
Sbjct: 301  TETEARYSCQLAQVQGLIGNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNAQPIGHCVSSSCTPC 1223
            +SED KLP NPCATTNA  I  C SS+   C
Sbjct: 361  DSEDSKLPCNPCATTNASSIS-CRSSAQNRC 390


>ref|NP_001069541.1| keratin, type I cuticular Ha5 [Bos taurus].
          Length = 455

 Score =  534 bits (1375), Expect = e-151
 Identities = 273/351 (77%), Positives = 299/351 (85%)
 Frame = +3

Query: 177  SGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPN 356
            +G WF EG   GNEKETMQFLNDRLASYLEKVRQLER+NA              P +CP+
Sbjct: 84   AGGWFGEGILTGNEKETMQFLNDRLASYLEKVRQLERENAELESRIHEWCEQQVPYLCPD 143

Query: 357  YQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSL 536
            YQSYF+TIEELQ+K L  KSENARLVVQIDNAKLAADDFRTKY+TE+ +RQLVESD+N L
Sbjct: 144  YQSYFQTIEELQKKTLCTKSENARLVVQIDNAKLAADDFRTKYETEVSMRQLVESDMNGL 203

Query: 537  RRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLN 716
            RR LD+LTLCKADLEAQVESLKEELLCLK+NHE+EVNSLR QLGDRLN+EVDAAP VDLN
Sbjct: 204  RRILDDLTLCKADLEAQVESLKEELLCLKKNHEEEVNSLRCQLGDRLNVEVDAAPPVDLN 263

Query: 717  SVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNAL 896
             VL+E R QYE LVE NRR+ E+WF  QTEELN+QVVSSSEQLQSYQAEIIELRRTVNAL
Sbjct: 264  RVLNEMRCQYETLVENNRREAEDWFNTQTEELNQQVVSSSEQLQSYQAEIIELRRTVNAL 323

Query: 897  EVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVL 1076
            E+ELQAQH++RD+LE+TL ETEARYSSQLAQ+QGLIGNVE+QLAEIR DLERQNQEYQVL
Sbjct: 324  EIELQAQHSMRDALESTLAETEARYSSQLAQMQGLIGNVESQLAEIRCDLERQNQEYQVL 383

Query: 1077 LDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGP 1229
            LDVRARLECEINTYRGLL+SEDCKLP NPCA        H  S SC PC P
Sbjct: 384  LDVRARLECEINTYRGLLDSEDCKLPCNPCAP------DHSPSKSCLPCLP 428


>ref|NP_001179454.1| keratin, type I cuticular Ha6 [Bos taurus].
          Length = 456

 Score =  518 bits (1333), Expect = e-147
 Identities = 264/351 (75%), Positives = 294/351 (83%)
 Frame = +3

Query: 177  SGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPN 356
            +G WFCEG+FNGNEKETMQFLNDRLASYLEKVRQLER+NA              P +CP+
Sbjct: 77   AGGWFCEGSFNGNEKETMQFLNDRLASYLEKVRQLERENAELESRIREWYESQAPYICPD 136

Query: 357  YQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSL 536
            YQ YF+TIEELQQKIL  K++NARLV+QIDNAKLAADDFRTKY+TELG+RQLVE+D N L
Sbjct: 137  YQCYFKTIEELQQKILLTKADNARLVLQIDNAKLAADDFRTKYETELGMRQLVEADTNGL 196

Query: 537  RRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLN 716
            R+ LDELTLCKADLE QVESLKEEL+CLK+NHE+EVN+LR QLGDRLN+EVDAAP VDLN
Sbjct: 197  RQILDELTLCKADLEMQVESLKEELICLKKNHEEEVNTLRCQLGDRLNVEVDAAPPVDLN 256

Query: 717  SVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNAL 896
             +L E R QYE LVE NRRDVE WF  QTEELN+QVVSSSEQLQ  Q EIIELRR VNAL
Sbjct: 257  KILDEMRCQYETLVENNRRDVEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRNVNAL 316

Query: 897  EVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVL 1076
            E+ELQAQH++R+SLE+TL ETEARYSSQLAQ+QGLIGNVEAQLAEIR DLERQNQEYQVL
Sbjct: 317  EIELQAQHSMRNSLESTLAETEARYSSQLAQMQGLIGNVEAQLAEIRCDLERQNQEYQVL 376

Query: 1077 LDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGP 1229
            LDV+ARLE EI TYR LLE EDCKLP++PCA T  +P       S  PC P
Sbjct: 377  LDVKARLESEIATYRRLLEGEDCKLPAHPCA-TECKPAVRVPYVSTGPCAP 426


>ref|XP_002696035.1| PREDICTED: keratin 36 [Bos taurus].
          Length = 456

 Score =  518 bits (1333), Expect = e-147
 Identities = 264/351 (75%), Positives = 294/351 (83%)
 Frame = +3

Query: 177  SGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPN 356
            +G WFCEG+FNGNEKETMQFLNDRLASYLEKVRQLER+NA              P +CP+
Sbjct: 77   AGGWFCEGSFNGNEKETMQFLNDRLASYLEKVRQLERENAELESRIREWYESQAPYICPD 136

Query: 357  YQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSL 536
            YQ YF+TIEELQQKIL  K++NARLV+QIDNAKLAADDFRTKY+TELG+RQLVE+D N L
Sbjct: 137  YQCYFKTIEELQQKILLTKADNARLVLQIDNAKLAADDFRTKYETELGMRQLVEADTNGL 196

Query: 537  RRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLN 716
            R+ LDELTLCKADLE QVESLKEEL+CLK+NHE+EVN+LR QLGDRLN+EVDAAP VDLN
Sbjct: 197  RQILDELTLCKADLEMQVESLKEELICLKKNHEEEVNTLRCQLGDRLNVEVDAAPPVDLN 256

Query: 717  SVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNAL 896
             +L E R QYE LVE NRRDVE WF  QTEELN+QVVSSSEQLQ  Q EIIELRR VNAL
Sbjct: 257  KILDEMRCQYETLVENNRRDVEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRNVNAL 316

Query: 897  EVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVL 1076
            E+ELQAQH++R+SLE+TL ETEARYSSQLAQ+QGLIGNVEAQLAEIR DLERQNQEYQVL
Sbjct: 317  EIELQAQHSMRNSLESTLAETEARYSSQLAQMQGLIGNVEAQLAEIRCDLERQNQEYQVL 376

Query: 1077 LDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGP 1229
            LDV+ARLE EI TYR LLE EDCKLP++PCA T  +P       S  PC P
Sbjct: 377  LDVKARLESEIATYRRLLEGEDCKLPAHPCA-TECKPAVRVPYVSTGPCAP 426


>ref|NP_001094772.1| keratin, type I cuticular Ha2 [Bos taurus].
          Length = 405

 Score =  492 bits (1267), Expect = e-139
 Identities = 253/365 (69%), Positives = 293/365 (80%)
 Frame = +3

Query: 156  NIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXX 335
            +I +++ S + F E  F+ NE+ET+Q LN+RLA+YLE+VRQLE++N              
Sbjct: 33   SIFSSMGSNSLFYESVFSSNERETLQLLNNRLAAYLERVRQLEQENVELERQLQEACEFQ 92

Query: 336  XPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLV 515
             P V PNY  YF+ IEELQQKIL  K+ENAR+VVQIDN KLAADDFR+KY+ ELGLRQLV
Sbjct: 93   EPTVGPNYFRYFQIIEELQQKILYSKAENARIVVQIDNTKLAADDFRSKYEMELGLRQLV 152

Query: 516  ESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDA 695
            E+D N LRR LDELTLCKADLE QVESLKEEL+CLK+NHE+EV +LR QLGDRLNIEVDA
Sbjct: 153  EADTNGLRRILDELTLCKADLEMQVESLKEELMCLKKNHEEEVGALRCQLGDRLNIEVDA 212

Query: 696  APTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIEL 875
               VDLN VL E R +YEALVETNRRDVEEWF +Q EELN+QVV+SSEQLQSYQ++II+L
Sbjct: 213  VSPVDLNKVLEEMRCRYEALVETNRRDVEEWFNKQMEELNQQVVTSSEQLQSYQSDIIDL 272

Query: 876  RRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQ 1055
            +RTVN LE+ELQ QH+LRDSLENTLTETEARY SQLAQ+QGL+ NVE+QLAEIR DLERQ
Sbjct: 273  KRTVNTLEIELQTQHSLRDSLENTLTETEARYGSQLAQMQGLVTNVESQLAEIRCDLERQ 332

Query: 1056 NQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGPRT 1235
            NQEY+VLLDVRARLE EINTYRGLL+SEDCKLP NPC+T +  P     S   T C PRT
Sbjct: 333  NQEYRVLLDVRARLEAEINTYRGLLDSEDCKLPGNPCSTPSQPPCAPAPSVPRTLCVPRT 392

Query: 1236 CFQSC 1250
                C
Sbjct: 393  VCVPC 397


>ref|XP_002696066.1| PREDICTED: keratin 38-like [Bos taurus].
          Length = 432

 Score =  472 bits (1214), Expect = e-133
 Identities = 247/378 (65%), Positives = 293/378 (77%), Gaps = 3/378 (0%)
 Frame = +3

Query: 141  LPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXX 320
            LPG C+IP        F EG FN +EKETMQFLNDRLASYLE+VR+LERDNA        
Sbjct: 58   LPGTCDIPGNSGICGTFGEGFFNSHEKETMQFLNDRLASYLERVRRLERDNAELESQIRE 117

Query: 321  XXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELG 500
                    VCP+YQS+FR IEELQQKIL  KSEN +LVVQIDNAKLAADDFRTK+QTE  
Sbjct: 118  LSKCPESTVCPDYQSHFRIIEELQQKILCVKSENNKLVVQIDNAKLAADDFRTKFQTEHS 177

Query: 501  LRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLN 680
            LRQLVE+D+  +RR LD+LTL KADLEAQ+ES KEELLCLK+NHEQEV++L+ QLGD+L 
Sbjct: 178  LRQLVEADVCGMRRALDDLTLAKADLEAQLESRKEELLCLKKNHEQEVHTLKCQLGDKLK 237

Query: 681  IEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQA 860
            IE+D  PTVDL  VL E R QYEA+VETN RDVE+WF  Q+E ++ Q +S SE+LQ  Q+
Sbjct: 238  IELDVEPTVDLGRVLEEMRGQYEAMVETNLRDVEQWFQTQSEGISLQAMSCSEELQCCQS 297

Query: 861  EIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRA 1040
            EI+ELRRTVNALEVELQAQH L+D L+N+L E+EAR+ ++LAQ+Q LI N+E QL+EIRA
Sbjct: 298  EILELRRTVNALEVELQAQHTLKDCLQNSLCESEARFGTELAQMQSLISNIEEQLSEIRA 357

Query: 1041 DLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCAT-TNAQPIGHCVSSSCT 1217
            DLERQNQEYQVLLDV+ARLECEI TYR LLE+EDCKLP NPCAT  ++  +G    +SC 
Sbjct: 358  DLERQNQEYQVLLDVKARLECEIATYRNLLENEDCKLPCNPCATPVSSTCVGSSACTSCY 417

Query: 1218 PC--GPRTCFQSCNTFGC 1265
            PC  GP     SC++  C
Sbjct: 418  PCLSGPA---GSCSSPRC 432


>ref|XP_592934.4| PREDICTED: keratin 38-like [Bos taurus].
          Length = 432

 Score =  472 bits (1214), Expect = e-133
 Identities = 247/378 (65%), Positives = 293/378 (77%), Gaps = 3/378 (0%)
 Frame = +3

Query: 141  LPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXX 320
            LPG C+IP        F EG FN +EKETMQFLNDRLASYLE+VR+LERDNA        
Sbjct: 58   LPGTCDIPGNSGICGTFGEGFFNSHEKETMQFLNDRLASYLERVRRLERDNAELESQIRE 117

Query: 321  XXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELG 500
                    VCP+YQS+FR IEELQQKIL  KSEN +LVVQIDNAKLAADDFRTK+QTE  
Sbjct: 118  LSKCPESTVCPDYQSHFRIIEELQQKILCVKSENNKLVVQIDNAKLAADDFRTKFQTEHS 177

Query: 501  LRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLN 680
            LRQLVE+D+  +RR LD+LTL KADLEAQ+ES KEELLCLK+NHEQEV++L+ QLGD+L 
Sbjct: 178  LRQLVEADVCGMRRALDDLTLAKADLEAQLESRKEELLCLKKNHEQEVHTLKCQLGDKLK 237

Query: 681  IEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQA 860
            IE+D  PTVDL  VL E R QYEA+VETN RDVE+WF  Q+E ++ Q +S SE+LQ  Q+
Sbjct: 238  IELDVEPTVDLGRVLEEMRGQYEAMVETNLRDVEQWFQTQSEGISLQAMSCSEELQCCQS 297

Query: 861  EIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRA 1040
            EI+ELRRTVNALEVELQAQH L+D L+N+L E+EAR+ ++LAQ+Q LI N+E QL+EIRA
Sbjct: 298  EILELRRTVNALEVELQAQHTLKDCLQNSLCESEARFGTELAQMQSLISNIEEQLSEIRA 357

Query: 1041 DLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCAT-TNAQPIGHCVSSSCT 1217
            DLERQNQEYQVLLDV+ARLECEI TYR LLE+EDCKLP NPCAT  ++  +G    +SC 
Sbjct: 358  DLERQNQEYQVLLDVKARLECEIATYRNLLENEDCKLPCNPCATPVSSTCVGSSACTSCY 417

Query: 1218 PC--GPRTCFQSCNTFGC 1265
            PC  GP     SC++  C
Sbjct: 418  PCLSGPA---GSCSSPRC 432


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 48,453,214
Number of extensions: 1173623
Number of successful extensions: 7687
Number of sequences better than 1.0e-05: 125
Number of HSP's gapped: 7328
Number of HSP's successfully gapped: 132
Length of query: 527
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 420
Effective length of database: 14,140,958
Effective search space: 5939202360
Effective search space used: 5939202360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012153
         (1581 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_849817.1| PREDICTED: similar to type I hair keratin KA28 ...   632   0.0  
Alignment   gi|XP_548111.2| PREDICTED: similar to type I hair keratin KA27 ...   610   e-174
Alignment   gi|XP_548114.2| PREDICTED: similar to type I hair keratin KA27 ...   607   e-173
Alignment   gi|XP_548112.2| PREDICTED: similar to type I hair keratin KA27 ...   588   e-168
Alignment   gi|XP_548108.2| PREDICTED: similar to type I hair keratin 2 [Ca...   530   e-150
Alignment   gi|XP_548107.2| PREDICTED: similar to type I hair keratin 6 [Ca...   520   e-147
Alignment   gi|XP_849714.1| PREDICTED: similar to type I hair keratin 5 [Ca...   509   e-144
Alignment   gi|XP_850058.1| PREDICTED: similar to type I hair keratin KA36 ...   455   e-128
Alignment   gi|XP_548109.2| PREDICTED: similar to type I hair keratin 8 [Ca...   451   e-127
Alignment   gi|XP_548110.2| PREDICTED: similar to type I hair keratin 8 [Ca...   447   e-125

>ref|XP_849817.1| PREDICTED: similar to type I hair keratin KA28 [Canis familiaris].
          Length = 407

 Score =  632 bits (1629), Expect = 0.0
 Identities = 327/407 (80%), Positives = 345/407 (84%), Gaps = 3/407 (0%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYNC LPNL                   TLPGACNIPA V +  WFCEG+FNG+EKETM
Sbjct: 1    MPYNCCLPNLSCRSTCSSRPCVPPSCHTCTLPGACNIPANVGNCGWFCEGSFNGSEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLER+NA              P VCP+YQSYFRTIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERENAELESRIREWCQQQVPFVCPSYQSYFRTIEELQQKILCS 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDIN LRR LDELTLCK+DLEAQV
Sbjct: 121  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINGLRRILDELTLCKSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELL LKQNHEQEVN+LR Q+GDRLN+EVDAAPTVDLN VL+ETRSQYEALVETNR
Sbjct: 181  ESLKEELLSLKQNHEQEVNTLRCQIGDRLNVEVDAAPTVDLNRVLNETRSQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            RDVEEWF  QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQHNLRDSLENTL
Sbjct: 241  RDVEEWFTTQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TETEARYSSQL QVQ +I NVE+QLAEIR DLERQNQEYQVLLDV+ARLECEINTYRGLL
Sbjct: 301  TETEARYSSQLNQVQCMITNVESQLAEIRCDLERQNQEYQVLLDVKARLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVSSSCTPCGPRTCFQSCNTFGC 1265
            ESEDCKLP NPCATTNA  +PIG CV++ CTPCGPR+    CNTFGC
Sbjct: 361  ESEDCKLPCNPCATTNACDKPIGPCVTNPCTPCGPRSRCGPCNTFGC 407


>ref|XP_548111.2| PREDICTED: similar to type I hair keratin KA27 [Canis familiaris].
          Length = 409

 Score =  610 bits (1573), Expect = e-174
 Identities = 318/407 (78%), Positives = 340/407 (83%), Gaps = 5/407 (1%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYNC LPNL                   TLPGACNIPA V +  WFCEG+FNG+EKETM
Sbjct: 1    MPYNCCLPNLSCRSTCSSRPCVPPSCHTCTLPGACNIPANVGNCGWFCEGSFNGSEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLER+NA              P VCP+YQSYFRTIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERENAELESRIRERCQQQEPFVCPSYQSYFRTIEELQQKILCT 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENA+LVVQ+DNAKLAADDFRTKY+TELGLRQLVESDIN LRR LDELTLCK+DLEAQV
Sbjct: 121  KSENAKLVVQVDNAKLAADDFRTKYETELGLRQLVESDINGLRRILDELTLCKSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELLCLK+NHE+EVN+LR Q+GDRLN+EVDAAP VDLN VL+ETRSQYEALVETNR
Sbjct: 181  ESLKEELLCLKRNHEEEVNTLRCQIGDRLNVEVDAAPAVDLNRVLNETRSQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            RDVEEWF  QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQHNLRDSLENTL
Sbjct: 241  RDVEEWFTTQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TETEARYSSQL Q+Q +I NVE+QLAEIR+DLERQNQEYQVLLDVRARLECEINTYRGLL
Sbjct: 301  TETEARYSSQLGQLQCMITNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNA-QPIGHCVSSS---CTPCGPRTCFQSCNTF 1259
            ESEDCKLP NPCATTNA    G CVS+S   CTPC PR     CN+F
Sbjct: 361  ESEDCKLPCNPCATTNACGSSGSCVSNSCAPCTPCAPRPRCGPCNSF 407


>ref|XP_548114.2| PREDICTED: similar to type I hair keratin KA27 [Canis familiaris].
          Length = 410

 Score =  607 bits (1564), Expect = e-173
 Identities = 319/405 (78%), Positives = 337/405 (83%), Gaps = 3/405 (0%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYNC LPNL                   TLPGACNIPA V +  WFCEG+FNG+EKETM
Sbjct: 7    MPYNCCLPNLSCRSTCSSRPCVPPSCHTCTLPGACNIPANVGNCGWFCEGSFNGSEKETM 66

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLER+NA              P VCP+YQSYFRTIEELQQKIL  
Sbjct: 67   QFLNDRLASYLEKVRQLERENAELESRIREWCQQQVPFVCPSYQSYFRTIEELQQKILCN 126

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLA+DDFRTKY+TE+GLRQLVESDIN LRR LDELTLCK+DLEAQV
Sbjct: 127  KSENARLVVQIDNAKLASDDFRTKYETEVGLRQLVESDINGLRRILDELTLCKSDLEAQV 186

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELL LKQNHEQEVN LR Q+GDRLN+EVDAAPTVDLN VL+ETRSQYEALVETNR
Sbjct: 187  ESLKEELLSLKQNHEQEVNILRCQIGDRLNVEVDAAPTVDLNRVLNETRSQYEALVETNR 246

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            RDVEEWF  QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQHNLRDSLENTL
Sbjct: 247  RDVEEWFTTQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTL 306

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TETEARYSSQL QVQ +I NVE+QLAEIR DLERQNQEYQVLLDV+ARLECEINTYRGLL
Sbjct: 307  TETEARYSSQLNQVQCMITNVESQLAEIRCDLERQNQEYQVLLDVKARLECEINTYRGLL 366

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVSSSCTPCGPRTCFQSCNTF 1259
            ESEDCKLP NPCATTNA  +PIG CVS+   PC  R     CNTF
Sbjct: 367  ESEDCKLPCNPCATTNACDKPIGPCVSN---PCAQRAWCGPCNTF 408


>ref|XP_548112.2| PREDICTED: similar to type I hair keratin KA27 [Canis familiaris].
          Length = 393

 Score =  588 bits (1517), Expect = e-168
 Identities = 307/392 (78%), Positives = 326/392 (83%), Gaps = 1/392 (0%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYNC LPNL                   TLPGACNIPA V +  WFCEG+FNG+EKETM
Sbjct: 1    MPYNCCLPNLSCRSTCSSRPCVPPSCHTCTLPGACNIPANVGNCGWFCEGSFNGSEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLER+NA              P VCP+YQSYFRTIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERENAELESRIREWCQQQVPFVCPSYQSYFRTIEELQQKILCA 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSEN RLVVQIDNAKLA+DDFRTKYQTEL LRQLVESDIN LRR LDELTLCK+DLEAQV
Sbjct: 121  KSENTRLVVQIDNAKLASDDFRTKYQTELSLRQLVESDINGLRRILDELTLCKSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESL+EELL LK+NHE+EVN+LR Q+GDRLN+EVDAAPTVDLN VL+ETRSQYEALVETNR
Sbjct: 181  ESLREELLSLKRNHEEEVNTLRCQIGDRLNVEVDAAPTVDLNRVLNETRSQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            RDVEEWF  QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQHNLRDSLENTL
Sbjct: 241  RDVEEWFTTQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TETEARY SQLAQVQ +I NVE+QLAEIR DLERQNQEYQVLLDV+ARLECEINTYRGLL
Sbjct: 301  TETEARYGSQLAQVQYMITNVESQLAEIRCDLERQNQEYQVLLDVKARLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNAQPIGHCVSSSCTPCG 1226
            ESEDCKLP NPCATTNA        +SC  CG
Sbjct: 361  ESEDCKLPCNPCATTNA------CGNSCGSCG 386


>ref|XP_548108.2| PREDICTED: similar to type I hair keratin 2 [Canis familiaris].
          Length = 448

 Score =  530 bits (1364), Expect = e-150
 Identities = 271/373 (72%), Positives = 306/373 (82%), Gaps = 4/373 (1%)
 Frame = +3

Query: 144  PGACNIPATVSSGN----WFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXX 311
            P +C   + +SS +    W+CEG+FNGNEKETMQFLNDRLASYLEKVRQLER+NA     
Sbjct: 68   PSSCRPTSGISSSSGTCSWYCEGSFNGNEKETMQFLNDRLASYLEKVRQLERENAELESK 127

Query: 312  XXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQT 491
                     P +CP+YQSYFRTIEELQQK+L  K+ENAR+VV IDNAKLAADDFRTKY+T
Sbjct: 128  IQEACRSQVPTMCPDYQSYFRTIEELQQKVLCTKAENARMVVHIDNAKLAADDFRTKYET 187

Query: 492  ELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGD 671
            E+ +RQLVE+D N LRR LDELTLCKADLEAQVESLKEELLCLK+NHE+EV++LR QLGD
Sbjct: 188  EVAMRQLVEADTNGLRRILDELTLCKADLEAQVESLKEELLCLKKNHEEEVSALRCQLGD 247

Query: 672  RLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQS 851
            RLNIEVDAA  VDLN +L E R QYE +VETN RDVEEWF  Q EELN+QV +SSEQLQS
Sbjct: 248  RLNIEVDAASPVDLNRMLEEMRCQYETVVETNLRDVEEWFNTQMEELNQQVATSSEQLQS 307

Query: 852  YQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAE 1031
            YQ++II+LRRTVN LE+ELQAQH+LRDSLENTL ETEARYSSQLAQ+Q +I NVE+QLAE
Sbjct: 308  YQSDIIDLRRTVNTLEIELQAQHSLRDSLENTLAETEARYSSQLAQMQCMITNVESQLAE 367

Query: 1032 IRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSS 1211
            IR DLERQNQEY+VLLDV+ARLECEINTYRGLLESEDCKLPSNPC+T    P     S S
Sbjct: 368  IRCDLERQNQEYKVLLDVKARLECEINTYRGLLESEDCKLPSNPCSTPTCPPCAPSPSVS 427

Query: 1212 CTPCGPRTCFQSC 1250
             T C PRT    C
Sbjct: 428  RTICVPRTVCVPC 440


>ref|XP_548107.2| PREDICTED: similar to type I hair keratin 6 [Canis familiaris].
          Length = 467

 Score =  520 bits (1339), Expect = e-147
 Identities = 268/366 (73%), Positives = 299/366 (81%)
 Frame = +3

Query: 132  GITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXX 311
            G  L   C+    V SG WFCEG+FNG+EKETMQFLNDRLA+YLEKVRQLER+NA     
Sbjct: 65   GSYLSAGCHPSGFVGSGGWFCEGSFNGSEKETMQFLNDRLANYLEKVRQLERENAELERR 124

Query: 312  XXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQT 491
                     P +CP+YQSYF+TIEELQQKIL  K+ENARLV+QIDNAKLAADDFRTKY+T
Sbjct: 125  IREWYESQIPYICPDYQSYFKTIEELQQKILLTKAENARLVLQIDNAKLAADDFRTKYET 184

Query: 492  ELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGD 671
            EL +RQLVE+D N LRR LDELTLCKADLE+QVESLKEELLCLK+NHE+EVN+LR QLGD
Sbjct: 185  ELSMRQLVEADTNGLRRILDELTLCKADLESQVESLKEELLCLKKNHEEEVNTLRCQLGD 244

Query: 672  RLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQS 851
            RLN+EVDAAP VDLN +L + R QYEALVE NRRDVE WF  QTEELN+QVVSSSEQLQ 
Sbjct: 245  RLNVEVDAAPPVDLNKILDDMRCQYEALVENNRRDVEAWFNTQTEELNQQVVSSSEQLQC 304

Query: 852  YQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAE 1031
             Q EIIELRR VNALE+ELQAQH++R+SLE+TL ETEARY SQLAQ+Q LIGNVEAQLAE
Sbjct: 305  CQTEIIELRRNVNALEIELQAQHSMRNSLESTLAETEARYGSQLAQMQCLIGNVEAQLAE 364

Query: 1032 IRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSS 1211
            IR DLERQNQEYQVLLDV+ARLE EI TYR LLE EDCKLP++PCA T  +P       S
Sbjct: 365  IRCDLERQNQEYQVLLDVKARLESEIATYRRLLEGEDCKLPAHPCA-TEGKPSIRVPYVS 423

Query: 1212 CTPCGP 1229
              PC P
Sbjct: 424  TVPCAP 429


>ref|XP_849714.1| PREDICTED: similar to type I hair keratin 5 [Canis familiaris].
          Length = 455

 Score =  509 bits (1311), Expect = e-144
 Identities = 269/368 (73%), Positives = 297/368 (80%), Gaps = 5/368 (1%)
 Frame = +3

Query: 141  LPGACNIPATVSS-----GNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXX 305
            LP  C  P   ++     G WF E    G+EKETMQ LNDRLASYLEKVRQLE++NA   
Sbjct: 67   LPALCLPPGGFATSYSLGGGWFGESVLTGSEKETMQSLNDRLASYLEKVRQLEQENASLE 126

Query: 306  XXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKY 485
                       P +CP+YQSYFRTIEELQ+K L  K+ENARLVVQIDNAKLAADDFRTKY
Sbjct: 127  SRIREWCEQQVPYLCPDYQSYFRTIEELQKKTLCTKAENARLVVQIDNAKLAADDFRTKY 186

Query: 486  QTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQL 665
            +TE+ +RQLVESD+N LRR LD+LTLCK+DLEAQVESLKEELLCLK+NHE+EVNSLR QL
Sbjct: 187  ETEVSMRQLVESDMNGLRRILDDLTLCKSDLEAQVESLKEELLCLKKNHEEEVNSLRCQL 246

Query: 666  GDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQL 845
            GDRLN+EVDAAP VDLN VL E R QYE LVE NRRD EEWF  QTEELN+QVVSSSEQL
Sbjct: 247  GDRLNVEVDAAPPVDLNRVLDEMRCQYETLVENNRRDAEEWFNTQTEELNQQVVSSSEQL 306

Query: 846  QSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQL 1025
            QS QAEIIELRRTVNALE+E+QAQ ++RD+LE+TL ETEARYSSQLAQ+Q LIGNVEAQL
Sbjct: 307  QSCQAEIIELRRTVNALEIEMQAQQSMRDALESTLAETEARYSSQLAQMQCLIGNVEAQL 366

Query: 1026 AEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVS 1205
            AEIRADLERQNQEYQVLLDVRARLE EINTYRGLLESE+ KLP NPCA        H  +
Sbjct: 367  AEIRADLERQNQEYQVLLDVRARLEGEINTYRGLLESEEGKLPGNPCAP------DHSPA 420

Query: 1206 SSCTPCGP 1229
             SC PC P
Sbjct: 421  KSCLPCLP 428


>ref|XP_850058.1| PREDICTED: similar to type I hair keratin KA36 [Canis familiaris].
          Length = 431

 Score =  455 bits (1171), Expect = e-128
 Identities = 236/359 (65%), Positives = 278/359 (77%)
 Frame = +3

Query: 147  GACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXX 326
            G  NIP  V +  W  +G FN NEKETMQFLNDRLA+YLEKVR LE  NA          
Sbjct: 66   GNYNIPCLVGNCAWCEDGVFNSNEKETMQFLNDRLANYLEKVRGLEEMNAELECRIREQC 125

Query: 327  XXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLR 506
                PLVCP+YQ YF TIEELQQKIL  K+EN+RL VQ+DN KLAADDFR+KY++EL LR
Sbjct: 126  EEDIPLVCPDYQCYFDTIEELQQKILCTKAENSRLAVQLDNCKLAADDFRSKYESELSLR 185

Query: 507  QLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIE 686
            QL+E+DI  LR  LDELTLCKADLEA VESLKE+LLCLK+NH++EV+ LR QLGDRL++E
Sbjct: 186  QLIETDIGGLRGILDELTLCKADLEAHVESLKEDLLCLKKNHKEEVDLLRGQLGDRLSVE 245

Query: 687  VDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEI 866
            +D APT+DLN VL E R QYE ++  NRRDVEEWFA QTEELN+Q + S+EQLQ  Q EI
Sbjct: 246  LDTAPTIDLNRVLEEMRCQYETVLANNRRDVEEWFAVQTEELNQQQLCSAEQLQDCQTEI 305

Query: 867  IELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADL 1046
            +EL+RT NALE+ELQAQ +L +SLE T+ ETEA+YS+QLAQ+Q LI NVE QLAEIR DL
Sbjct: 306  LELKRTANALEIELQAQQSLTESLECTVAETEAQYSTQLAQMQCLIDNVENQLAEIRCDL 365

Query: 1047 ERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPC 1223
            ERQNQEY+VLLD +A LE EINTYRGLLESED +LP NPC+T +        S++C  C
Sbjct: 366  ERQNQEYEVLLDTKALLEGEINTYRGLLESEDSRLPCNPCSTISTS------SNTCEAC 418


>ref|XP_548109.2| PREDICTED: similar to type I hair keratin 8 [Canis familiaris].
          Length = 589

 Score =  451 bits (1161), Expect = e-127
 Identities = 233/373 (62%), Positives = 284/373 (76%)
 Frame = +3

Query: 141  LPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXX 320
            LPG  NIP  +     + EGA NG+EK TMQFLNDRLA+YLEKVRQLERDN         
Sbjct: 211  LPGTRNIPGNIGVCENYGEGAPNGHEKVTMQFLNDRLANYLEKVRQLERDNEELETKIRE 270

Query: 321  XXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELG 500
                    VCP+YQSYF+TIEELQQKIL  K+EN RL++Q+DNAKLAADDFR K+++EL 
Sbjct: 271  SSKCHESTVCPDYQSYFQTIEELQQKILCSKAENTRLIIQVDNAKLAADDFRIKHESELS 330

Query: 501  LRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLN 680
            LRQ+VE+D+  + + +D+L+L KADLEAQ ESLKEELLCLK+NHEQEV+ LR QLGD+L 
Sbjct: 331  LRQMVEADMCGMHKLMDDLSLAKADLEAQQESLKEELLCLKRNHEQEVSILRGQLGDKLQ 390

Query: 681  IEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQA 860
            I++D  PTVDL  VL + R  YEA+V+T+R DVEEWF  Q+E +++Q +S SE+L+  Q+
Sbjct: 391  IKLDVEPTVDLGRVLEDMRCHYEAMVQTSRNDVEEWFQDQSESISQQDMSCSEELRCCQS 450

Query: 861  EIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRA 1040
            EI+ELRRTVNALEVELQAQH L+D L+N+L E +AR+ ++LAQ+Q LI NVE QL+EIR 
Sbjct: 451  EILELRRTVNALEVELQAQHTLKDCLQNSLCEADARFGTELAQMQILISNVEEQLSEIRG 510

Query: 1041 DLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTP 1220
            DLERQNQEYQVLLDV+ARLECEINTYR LLESEDCKLP NPC+T        CV+S   P
Sbjct: 511  DLERQNQEYQVLLDVKARLECEINTYRKLLESEDCKLPCNPCSTA-----ASCVTS---P 562

Query: 1221 CGPRTCFQSCNTF 1259
            C  R     C TF
Sbjct: 563  CATRPSCALCPTF 575


>ref|XP_548110.2| PREDICTED: similar to type I hair keratin 8 [Canis familiaris].
          Length = 440

 Score =  447 bits (1149), Expect = e-125
 Identities = 227/361 (62%), Positives = 283/361 (78%), Gaps = 1/361 (0%)
 Frame = +3

Query: 141  LPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXX 320
            LPG  NIP  +     + EGA NG+EK TMQFLNDRLA+YLEKVRQLERDN         
Sbjct: 79   LPGTRNIPGNIGVCENYGEGAPNGHEKVTMQFLNDRLANYLEKVRQLERDNEELETKIRE 138

Query: 321  XXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELG 500
                    VCP+YQSYF+TI+ELQQKIL  K+EN R+V+QIDNAKLAADDFR K+++EL 
Sbjct: 139  SSKCHESTVCPDYQSYFQTIKELQQKILCSKAENTRMVIQIDNAKLAADDFRIKHESELS 198

Query: 501  LRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLN 680
            LRQ+VE+D+  + + +D+L+L KADLEAQ ESLKEELLCLK+NHEQEV+ LR QLGD+L 
Sbjct: 199  LRQVVEADMCGMHKLMDDLSLAKADLEAQQESLKEELLCLKRNHEQEVSILRGQLGDKLQ 258

Query: 681  IEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQA 860
            I++D  PTVDL  VL + R  YEA+V+T+R DVEEWF  Q+E +++Q +S SE+L+  Q+
Sbjct: 259  IKLDVEPTVDLGRVLEDMRCHYEAMVQTSRNDVEEWFQDQSESISQQDMSCSEELRCCQS 318

Query: 861  EIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRA 1040
            EI+ELRRTVNALEVELQAQH L+D L+N+L E +AR+ ++LAQ+Q LI NVE QL+EIR 
Sbjct: 319  EILELRRTVNALEVELQAQHTLKDCLQNSLCEADARFGTELAQMQILISNVEEQLSEIRG 378

Query: 1041 DLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIG-HCVSSSCT 1217
            DLERQNQEYQVLLDV+ARLECEI TYR LLESEDCKLP NPC+T  ++ +G  C  ++C+
Sbjct: 379  DLERQNQEYQVLLDVKARLECEIATYRKLLESEDCKLPINPCSTAASRVLGPSCAPATCS 438

Query: 1218 P 1220
            P
Sbjct: 439  P 439


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 50,448,505
Number of extensions: 1201851
Number of successful extensions: 8478
Number of sequences better than 1.0e-05: 150
Number of HSP's gapped: 7930
Number of HSP's successfully gapped: 162
Length of query: 527
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 420
Effective length of database: 15,307,552
Effective search space: 6429171840
Effective search space used: 6429171840
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012153
         (1581 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003131489.2| PREDICTED: keratin, type I cuticular Ha3-II ...   734   0.0  
Alignment   gi|XP_003358093.1| PREDICTED: keratin, type I microfibrillar, 4...   665   0.0  
Alignment   gi|XP_003131477.1| PREDICTED: keratin, type I microfibrillar 48...   665   0.0  
Alignment   gi|XP_003131478.1| PREDICTED: LOW QUALITY PROTEIN: keratin, typ...   631   0.0  
Alignment   gi|XP_003131480.2| PREDICTED: keratin, type I cuticular Ha6 iso...   528   e-150
Alignment   gi|XP_003131482.2| PREDICTED: keratin, type I cuticular Ha5-lik...   518   e-147
Alignment   gi|XP_003131481.1| PREDICTED: keratin, type I cuticular Ha2 [Su...   513   e-146
Alignment   gi|XP_003131529.2| PREDICTED: keratin, type I cytoskeletal 39 [...   420   e-117
Alignment   gi|XP_003131528.2| PREDICTED: keratin, type I cytoskeletal 40-l...   386   e-107
Alignment   gi|XP_003131485.1| PREDICTED: keratin, type I cytoskeletal 19-l...   353   1e-97

>ref|XP_003131489.2| PREDICTED: keratin, type I cuticular Ha3-II [Sus scrofa].
          Length = 439

 Score =  734 bits (1894), Expect = 0.0
 Identities = 374/405 (92%), Positives = 375/405 (92%)
 Frame = +3

Query: 51   IMPYNCLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            IMPYNCLPNL                QGITLPGACNIPATVSSGNWFCEGAFNGNEKETM
Sbjct: 35   IMPYNCLPNLSCRSSSSSRPCVPSSCQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 94

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLERDNA              PLVCPNYQSYFRTIEELQQKILSG
Sbjct: 95   QFLNDRLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQQKILSG 154

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV
Sbjct: 155  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 214

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR
Sbjct: 215  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 274

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL
Sbjct: 275  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 334

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL
Sbjct: 335  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 394

Query: 1131 ESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGPRTCFQSCNTFGC 1265
            ESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGPRTCF+SCNTFGC
Sbjct: 395  ESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGPRTCFKSCNTFGC 439


>ref|XP_003358093.1| PREDICTED: keratin, type I microfibrillar, 47.6 kDa-like [Sus
            scrofa].
          Length = 403

 Score =  665 bits (1717), Expect = 0.0
 Identities = 348/403 (86%), Positives = 355/403 (88%), Gaps = 2/403 (0%)
 Frame = +3

Query: 54   MPYNCLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQ 233
            MPYNCLPNL                QGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQ
Sbjct: 1    MPYNCLPNLSCRSSSSSRPCVPSSCQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQ 60

Query: 234  FLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGK 413
            FLNDRLASYLEKVRQLERDNA              PLVCPNYQSYFRTIEELQQKIL  K
Sbjct: 61   FLNDRLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQQKILCSK 120

Query: 414  SENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVE 593
            SENARLVVQIDNAKLA+DDFRTKY+TELGLRQLVESD+N LRR LDELTLCKADLEAQVE
Sbjct: 121  SENARLVVQIDNAKLASDDFRTKYETELGLRQLVESDLNGLRRILDELTLCKADLEAQVE 180

Query: 594  SLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRR 773
            SLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVL+ETRSQYEALVETNRR
Sbjct: 181  SLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLNETRSQYEALVETNRR 240

Query: 774  DVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLT 953
            DVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLT
Sbjct: 241  DVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLT 300

Query: 954  ETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLE 1133
            ETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLE
Sbjct: 301  ETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLE 360

Query: 1134 SEDCKLPSNPCATTNA--QPIGHCVSSSCTPCGPRTCFQSCNT 1256
            SEDCKLP NPCATTNA  + +G CVS+   PC  RT    CNT
Sbjct: 361  SEDCKLPCNPCATTNAYEKTVGPCVSN---PCVSRTWCGPCNT 400


>ref|XP_003131477.1| PREDICTED: keratin, type I microfibrillar 48 kDa, component 8C-1-like
            [Sus scrofa].
          Length = 414

 Score =  665 bits (1716), Expect = 0.0
 Identities = 346/400 (86%), Positives = 351/400 (87%), Gaps = 1/400 (0%)
 Frame = +3

Query: 54   MPYN-CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPY+ CLPNL                QGITLPGACNIPATVSSGNWFCEGAFNGNEKETM
Sbjct: 1    MPYSFCLPNLSCRSSSSSRPCVPSSCQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLERDNA              PLVCPNYQSYFRTIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQQKILCS 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLAADDFRTKY+TELGLRQLVESDIN LRR LDELTLCKADLEAQV
Sbjct: 121  KSENARLVVQIDNAKLAADDFRTKYETELGLRQLVESDINGLRRILDELTLCKADLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELLCLK NHE+EVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR
Sbjct: 181  ESLKEELLCLKSNHEEEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL
Sbjct: 241  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL
Sbjct: 301  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGPRTCFQSC 1250
            ESEDCKLP NPCATTNA+ I  CVS+ C PC P      C
Sbjct: 361  ESEDCKLPCNPCATTNAKTITPCVSNPCPPCAPAVPCTPC 400


>ref|XP_003131478.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type I cuticular Ha4-like
            [Sus scrofa].
          Length = 435

 Score =  631 bits (1628), Expect = 0.0
 Identities = 330/391 (84%), Positives = 339/391 (86%)
 Frame = +3

Query: 66   CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLND 245
            CLPNL                QGITLPGA NIPATVSSGNWFCEGAFNGNEKETMQFLND
Sbjct: 50   CLPNLSCRSSCSSRPCVPSSCQGITLPGARNIPATVSSGNWFCEGAFNGNEKETMQFLND 109

Query: 246  RLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENA 425
            RLASYLEKVRQLERDNA              PLVCPNYQSYFRTIEELQQKILS KSEN 
Sbjct: 110  RLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQQKILSAKSENT 169

Query: 426  RLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKE 605
            RLVVQ+DNAKLAADDFRTKY+ E   RQLVESDINSLRR LDELTLCKADLE QVESL+E
Sbjct: 170  RLVVQVDNAKLAADDFRTKYEVERSSRQLVESDINSLRRILDELTLCKADLETQVESLRE 229

Query: 606  ELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEE 785
            ELLCLK+NHE+EVNSLRSQLGDRLNIEVDAAPTVDLNSVL+ETRSQYEALVETNRRDVEE
Sbjct: 230  ELLCLKKNHEEEVNSLRSQLGDRLNIEVDAAPTVDLNSVLNETRSQYEALVETNRRDVEE 289

Query: 786  WFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA 965
            WFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA
Sbjct: 290  WFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA 349

Query: 966  RYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDC 1145
            RYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDC
Sbjct: 350  RYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDC 409

Query: 1146 KLPSNPCATTNAQPIGHCVSSSCTPCGPRTC 1238
            KLPSNPCATTNA       ++S   C  + C
Sbjct: 410  KLPSNPCATTNAS------ANSYVSCSQKRC 434


>ref|XP_003131480.2| PREDICTED: keratin, type I cuticular Ha6 isoform 2 [Sus scrofa].
          Length = 459

 Score =  528 bits (1359), Expect = e-150
 Identities = 273/371 (73%), Positives = 302/371 (81%), Gaps = 5/371 (1%)
 Frame = +3

Query: 132  GITLPGAC-----NIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNA 296
            G  LPG+C     N  +   SG WFCEGAFNGNEKETMQFLNDRLA+YLEKVRQLERDNA
Sbjct: 60   GSYLPGSCLSSGYNSSSFAGSGGWFCEGAFNGNEKETMQFLNDRLANYLEKVRQLERDNA 119

Query: 297  XXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFR 476
                          P +CP+YQ+YF+TIEELQQKIL  K++NARLV+QIDNAKLAADDFR
Sbjct: 120  ELESRIREWYESQIPYICPDYQAYFKTIEELQQKILITKADNARLVLQIDNAKLAADDFR 179

Query: 477  TKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLR 656
            TKY+TELG+RQLVE+D N LRR LDELTLCKADLE QVESLKEEL+CLK+NHE+EVN+LR
Sbjct: 180  TKYETELGMRQLVEADTNGLRRILDELTLCKADLEMQVESLKEELICLKKNHEEEVNTLR 239

Query: 657  SQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSS 836
             QLGDRLN+EVDAAP VDLN +L + R QYEALVE NRRDVE WF  QTEELN+QVVSSS
Sbjct: 240  CQLGDRLNVEVDAAPPVDLNKILDDMRCQYEALVENNRRDVEAWFNTQTEELNQQVVSSS 299

Query: 837  EQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVE 1016
            EQLQ  Q EIIELRR VNALE+ELQAQH++R+SLE TL ETEARYSSQLAQ+QGLI NVE
Sbjct: 300  EQLQCCQTEIIELRRNVNALEIELQAQHSMRNSLEATLAETEARYSSQLAQMQGLISNVE 359

Query: 1017 AQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGH 1196
            AQLAEIR DLERQNQEYQVLLDV+ARLE EI TYR LLE EDCKLP++PCA T  QP   
Sbjct: 360  AQLAEIRCDLERQNQEYQVLLDVKARLESEIATYRRLLEGEDCKLPAHPCA-TECQPAVR 418

Query: 1197 CVSSSCTPCGP 1229
                S  PC P
Sbjct: 419  VPYVSSVPCAP 429


>ref|XP_003131482.2| PREDICTED: keratin, type I cuticular Ha5-like [Sus scrofa].
          Length = 493

 Score =  518 bits (1335), Expect = e-147
 Identities = 266/350 (76%), Positives = 294/350 (84%)
 Frame = +3

Query: 180  GNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNY 359
            G WF EG   GNEKETMQ LNDRLASYLEKVR+LER+N+              P +CP+Y
Sbjct: 123  GGWFGEGILTGNEKETMQSLNDRLASYLEKVRRLERENSELEGRIREWCEQQEPYLCPDY 182

Query: 360  QSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLR 539
            QSYF+TIEELQ+K L  K+ENARLVVQIDNAKLAADDFR+KY+TE+ +RQLVESD+N LR
Sbjct: 183  QSYFQTIEELQKKTLCTKAENARLVVQIDNAKLAADDFRSKYETEVSMRQLVESDMNGLR 242

Query: 540  RTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNS 719
            R LD+LTLCKADLEAQVESLKEELLCLK+NHE+EVNSLR QLGDRLN+EVDAAP VDLN 
Sbjct: 243  RILDDLTLCKADLEAQVESLKEELLCLKKNHEEEVNSLRCQLGDRLNVEVDAAPPVDLNR 302

Query: 720  VLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALE 899
            VL E R QYE LVE NRRD E+WF  QTEELN+QVV+SSEQLQS QA+I+ELRR VNALE
Sbjct: 303  VLDEMRCQYETLVENNRRDAEDWFNTQTEELNQQVVTSSEQLQSCQADIMELRRNVNALE 362

Query: 900  VELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLL 1079
            +ELQAQH++RD+LE+TL ETEARYSSQLAQ+QGLIGNVEAQLAEIRADLERQNQEYQVLL
Sbjct: 363  IELQAQHSMRDALESTLAETEARYSSQLAQMQGLIGNVEAQLAEIRADLERQNQEYQVLL 422

Query: 1080 DVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGP 1229
            DVRARLE EINTYRGLLESEDCKLP NPCA       GH  S  C PC P
Sbjct: 423  DVRARLESEINTYRGLLESEDCKLPCNPCAP------GHAPSKPCLPCLP 466


>ref|XP_003131481.1| PREDICTED: keratin, type I cuticular Ha2 [Sus scrofa].
          Length = 460

 Score =  513 bits (1322), Expect = e-146
 Identities = 265/362 (73%), Positives = 297/362 (82%)
 Frame = +3

Query: 165  ATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPL 344
            ++V +   + EG+FNGNEKET+QFLNDRLA YLEKVRQLE+DNA              P 
Sbjct: 91   SSVGTYGGYHEGSFNGNEKETLQFLNDRLAKYLEKVRQLEQDNAELESKIQEASQSQVPT 150

Query: 345  VCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESD 524
            +  NY SYFRTIEELQQKIL  ++ENAR +V +DNAKLAADDFRTKY+TEL +RQLVE+D
Sbjct: 151  LSSNYHSYFRTIEELQQKILCTRAENARTIVHMDNAKLAADDFRTKYETELAMRQLVEAD 210

Query: 525  INSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPT 704
             N LRR LDELTLCKADLE QVESLKEEL+CLK+NHE+EV +L+ QLGDRLNIEVDAAP 
Sbjct: 211  TNGLRRILDELTLCKADLEMQVESLKEELMCLKKNHEEEVGALQGQLGDRLNIEVDAAPP 270

Query: 705  VDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRT 884
            VDLN VL E R QYEALVE+NRRDVEEWF  Q EELN+QV +SSEQLQSYQ++ I+LRRT
Sbjct: 271  VDLNRVLEEMRCQYEALVESNRRDVEEWFTMQMEELNQQVATSSEQLQSYQSDAIDLRRT 330

Query: 885  VNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQE 1064
            VN LE+ELQAQH+LRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQE
Sbjct: 331  VNMLEIELQAQHSLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQE 390

Query: 1065 YQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGPRTCFQ 1244
            YQVLLDVRARLECEINTYRGLLESEDCKLP NPC+T +      C  S+ +   PR    
Sbjct: 391  YQVLLDVRARLECEINTYRGLLESEDCKLPCNPCSTAS------CPQSASSSSAPRPVGV 444

Query: 1245 SC 1250
             C
Sbjct: 445  PC 446


>ref|XP_003131529.2| PREDICTED: keratin, type I cytoskeletal 39 [Sus scrofa].
          Length = 492

 Score =  420 bits (1080), Expect = e-117
 Identities = 223/352 (63%), Positives = 268/352 (76%)
 Frame = +3

Query: 153  CNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXX 332
            C+   ++   +W CE   +  EKETMQFLNDRLA+YLEKVR LER+NA            
Sbjct: 76   CSACPSLDDCHW-CEEGIHCKEKETMQFLNDRLANYLEKVRMLERENAALECKIQEECDK 134

Query: 333  XXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQL 512
              P++CP+YQS +  IEELQQKIL  K+EN+RLV QIDN KLAADD R KY+ E+ LRQL
Sbjct: 135  ELPVMCPDYQSCYAIIEELQQKILCTKAENSRLVSQIDNTKLAADDLRAKYEAEVSLRQL 194

Query: 513  VESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVD 692
            VE+D N LR+ L+ LTL +ADLEAQV SLKEELLCLK NHE+E++SL+SQLG+RL+IEV 
Sbjct: 195  VEADANGLRQILNALTLGEADLEAQVRSLKEELLCLKSNHEEEISSLQSQLGERLSIEVT 254

Query: 693  AAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIE 872
            AAP++DLN VL E R QYE++VETNRRDVE+WF  Q E+LN+QV +S++Q Q  Q EIIE
Sbjct: 255  AAPSIDLNRVLQEMRCQYESVVETNRRDVEQWFCTQMEDLNQQVATSTQQQQCCQREIIE 314

Query: 873  LRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLER 1052
            LR TVNALE ELQA H +RDS E  L ETEARY++ LAQ+Q LI N+EAQLAEIR  LER
Sbjct: 315  LRSTVNALENELQALHRMRDSQEWALAETEARYAALLAQIQRLIDNLEAQLAEIRGALER 374

Query: 1053 QNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSS 1208
            QNQEY++LLD+R+RLECEI TYR LLE  D KLP +PCA T  QP   C SS
Sbjct: 375  QNQEYEILLDIRSRLECEITTYRSLLERSDGKLPCHPCA-TKYQP-STCTSS 424


>ref|XP_003131528.2| PREDICTED: keratin, type I cytoskeletal 40-like [Sus scrofa].
          Length = 464

 Score =  386 bits (992), Expect = e-107
 Identities = 205/335 (61%), Positives = 248/335 (74%)
 Frame = +3

Query: 144  PGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXX 323
            P +C  P   S G+        GN KETM+ LNDRLASYL+KVR LE  N          
Sbjct: 50   PRSCPPPGG-SWGSGRGSSLLGGNGKETMRNLNDRLASYLDKVRALEEANVKLESCILKW 108

Query: 324  XXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGL 503
                      +Y  Y  +I  LQ++IL  K+EN+RL VQ+DN KLAADDFR+KY  EL L
Sbjct: 109  HEQRDSGSKQDYSQYEESISRLQEQILCTKAENSRLAVQLDNCKLAADDFRSKYDAELSL 168

Query: 504  RQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNI 683
            RQLVE DI+ LR  L EL+LC++DLEA VESLK++LLCLK+NHE+EVN LR QLGDRL++
Sbjct: 169  RQLVEMDISGLRGILGELSLCQSDLEAHVESLKDDLLCLKKNHEEEVNVLREQLGDRLSV 228

Query: 684  EVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAE 863
            E++ APTVDLN VL E R QYE ++  N RD+EEWFA QTEELN+Q +SS+EQLQ  Q E
Sbjct: 229  ELNTAPTVDLNKVLDEMRGQYETVLANNHRDMEEWFAVQTEELNQQQLSSAEQLQGCQTE 288

Query: 864  IIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRAD 1043
            ++EL+RT  ALE+ELQAQ +L +SLE T+ ETEA+YSSQLAQ+Q LI +VE QLAEIR D
Sbjct: 289  MLELKRTATALEIELQAQQSLTESLECTVAETEAQYSSQLAQMQRLIDSVETQLAEIRCD 348

Query: 1044 LERQNQEYQVLLDVRARLECEINTYRGLLESEDCK 1148
            LERQNQEY+VLLD +ARLECEI TYRGLLESEDC+
Sbjct: 349  LERQNQEYEVLLDTKARLECEITTYRGLLESEDCR 383


>ref|XP_003131485.1| PREDICTED: keratin, type I cytoskeletal 19-like [Sus scrofa].
          Length = 404

 Score =  353 bits (907), Expect = 1e-97
 Identities = 176/316 (55%), Positives = 234/316 (74%)
 Frame = +3

Query: 195  EGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFR 374
            +G   GNEK TMQ LNDRLASYLEKVR LE+ N               P    +Y  YF+
Sbjct: 77   DGLLAGNEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFK 136

Query: 375  TIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDE 554
            TIE+L+ KIL    EN+++V+QIDNA+LAADDFRTK++TE  LR  VE+DIN LRR LDE
Sbjct: 137  TIEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDE 196

Query: 555  LTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSET 734
            LTL + DLE Q+E LKEEL  LK+NHE+E+++L+ Q+G ++++EVD+AP +DL  +LS+ 
Sbjct: 197  LTLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDM 256

Query: 735  RSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQA 914
            RSQYE + E NR+D E WF  +TEELN++V   +EQLQ  + E+ +LRRT+  LE+ELQ+
Sbjct: 257  RSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQS 316

Query: 915  QHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRAR 1094
            Q +++ +LE TL ETEAR+ +QLAQ+Q LI  +EAQL+++RAD ERQNQEYQ L+D++ R
Sbjct: 317  QLSMKAALEGTLAETEARFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTR 376

Query: 1095 LECEINTYRGLLESED 1142
            LE EI TYR LLE +D
Sbjct: 377  LEQEIATYRNLLEGQD 392


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,249,502
Number of extensions: 755098
Number of successful extensions: 4855
Number of sequences better than 1.0e-05: 72
Number of HSP's gapped: 4649
Number of HSP's successfully gapped: 74
Length of query: 527
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 423
Effective length of database: 8,754,644
Effective search space: 3703214412
Effective search space used: 3703214412
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012153
         (1581 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_034789.2| keratin, type I cuticular Ha1 [Mus musculus].        605   e-173
Alignment   gi|NP_082259.2| keratin, type I cuticular Ha3-I [Mus musculus].      605   e-173
Alignment   gi|NP_038598.1| keratin, type I cuticular Ha3-II [Mus musculus].     601   e-172
Alignment   gi|NP_081839.1| keratin, type I cuticular Ha4 [Mus musculus].        580   e-166
Alignment   gi|NP_001167570.1| keratin, type I cuticular Ha6 [Mus musculus].     513   e-145
Alignment   gi|NP_058576.2| keratin, type I cuticular Ha5 [Mus musculus].        509   e-144
Alignment   gi|NP_001152846.2| keratin, type I cuticular Ha2 [Mus musculus].     498   e-141
Alignment   gi|NP_001034755.1| keratin, type I cytoskeletal 40 [Mus musculu...   457   e-128
Alignment   gi|NP_998895.2| keratin, type I cytoskeletal 39 [Mus musculus].      419   e-117
Alignment   gi|NP_997648.2| keratin, type I cytoskeletal 42 [Mus musculus].      374   e-103

>ref|NP_034789.2| keratin, type I cuticular Ha1 [Mus musculus].
          Length = 416

 Score =  605 bits (1561), Expect = e-173
 Identities = 317/414 (76%), Positives = 342/414 (82%), Gaps = 12/414 (2%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYNC LP L                 G TLPGACNIPA V + NWFCEG+FNGNEKETM
Sbjct: 1    MPYNCCLPALSCRTSCSSRPCVPPSCHGCTLPGACNIPANVGNCNWFCEGSFNGNEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASY+EKVRQLER+NA              PLVCP YQ+YFRTIEELQQKIL  
Sbjct: 61   QFLNDRLASYMEKVRQLERENAELECRIQERNQQQDPLVCPAYQAYFRTIEELQQKILCS 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLAADDFRTKY+TELGLRQLVESDIN LRR LDELTLCK+DLEAQV
Sbjct: 121  KSENARLVVQIDNAKLAADDFRTKYETELGLRQLVESDINGLRRILDELTLCKSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELLCLK+NHE+EVN+LR QLGDRLN+EVDAAPTVDLN VL+ETR QYEA+VETNR
Sbjct: 181  ESLKEELLCLKRNHEEEVNTLRCQLGDRLNVEVDAAPTVDLNRVLNETRCQYEAMVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            R+VEEWF  QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQH +R+SLENTL
Sbjct: 241  REVEEWFTTQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHCMRNSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TE+EARYSSQL+QVQ LI NVE+QL EIRADLERQNQEYQVLLDV+ARLECEINTYRGLL
Sbjct: 301  TESEARYSSQLSQVQCLITNVESQLGEIRADLERQNQEYQVLLDVKARLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVS---------SSCTPCGPRTCFQSCNTF 1259
            ESEDCKLP NPCAT+NA  +PIG CVS         + CTPC PR     CN+F
Sbjct: 361  ESEDCKLPCNPCATSNACGKPIGPCVSNPCVPCPPPAPCTPCVPRPRCGPCNSF 414


>ref|NP_082259.2| keratin, type I cuticular Ha3-I [Mus musculus].
          Length = 404

 Score =  605 bits (1559), Expect = e-173
 Identities = 316/408 (77%), Positives = 340/408 (83%), Gaps = 6/408 (1%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYNC LP +                 G TLPGACNIPA V + NWFCEG+FNGNEKETM
Sbjct: 1    MPYNCCLPAMSCRTSCSSRPCVPPSCHGCTLPGACNIPANVGNCNWFCEGSFNGNEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASY+EKVRQLER+NA              PLVCP YQ+YFRTIEELQQKIL G
Sbjct: 61   QFLNDRLASYMEKVRQLERENAELECRIQERNQQQDPLVCPAYQAYFRTIEELQQKILCG 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLA+DDFRTKY+TEL LRQLVE+DINSLRR LDELTLCK+DLEAQV
Sbjct: 121  KSENARLVVQIDNAKLASDDFRTKYETELSLRQLVEADINSLRRILDELTLCKSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELLCLKQNHEQEVN+LR QLGDRLN+EVDAAPTVDLN VL+ETR QYEALVETNR
Sbjct: 181  ESLKEELLCLKQNHEQEVNTLRCQLGDRLNVEVDAAPTVDLNRVLNETRCQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            R+VEEW+  QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQH LR+SLENTL
Sbjct: 241  REVEEWYTTQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHELRNSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TE+EARYSSQL+QVQ LI NVE+QL EIRADLERQNQEYQVLLD+R+RLECEINTYRGLL
Sbjct: 301  TESEARYSSQLSQVQCLITNVESQLGEIRADLERQNQEYQVLLDIRSRLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVSSSCTP---CGPRTCFQSCNTF 1259
            ESEDCKLP NPCATTNA  +PIG CV + C     CGP      CNTF
Sbjct: 361  ESEDCKLPCNPCATTNACDKPIGPCVPNPCVTRPRCGP------CNTF 402


>ref|NP_038598.1| keratin, type I cuticular Ha3-II [Mus musculus].
          Length = 404

 Score =  601 bits (1550), Expect = e-172
 Identities = 311/410 (75%), Positives = 342/410 (83%), Gaps = 6/410 (1%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYNC LP +                 G TLPGACNIPA V + NWFCEG+FNGNE+ETM
Sbjct: 1    MPYNCCLPAMSCRTSCSSRPCVPPSCHGCTLPGACNIPANVGNCNWFCEGSFNGNERETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASY+EKVRQLER+NA              PLVCP YQ+YFRTIEELQQKIL G
Sbjct: 61   QFLNDRLASYMEKVRQLERENAELECKIQERNQQQDPLVCPAYQAYFRTIEELQQKILCG 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSEN RLVVQIDNAKLAADDFRTKY++EL LRQLVESD+N LRR LDELTLCK+DLEAQV
Sbjct: 121  KSENGRLVVQIDNAKLAADDFRTKYESELSLRQLVESDLNGLRRILDELTLCKSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESL++ELLCLKQNHE+EVN+LR QLGDRLN+EVDAAPTVDLN VL+ETR QYEALVETNR
Sbjct: 181  ESLRQELLCLKQNHEEEVNTLRCQLGDRLNVEVDAAPTVDLNRVLNETRCQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            R+VEEWF  QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQH++R+SLENTL
Sbjct: 241  REVEEWFTTQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHSMRNSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
             E+EARYSSQL+QVQ LI NVE+QL EIRADLERQNQEYQVLLDV+ARLECEINTYRGLL
Sbjct: 301  AESEARYSSQLSQVQCLITNVESQLGEIRADLERQNQEYQVLLDVKARLECEINTYRGLL 360

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVSSSC---TPCGPRTCFQSCNTFGC 1265
            ESEDCKLP NPCATTNA  +PIG CV++ C   + CGP      CN+FGC
Sbjct: 361  ESEDCKLPCNPCATTNACDKPIGPCVTNPCVTRSRCGP------CNSFGC 404


>ref|NP_081839.1| keratin, type I cuticular Ha4 [Mus musculus].
          Length = 392

 Score =  580 bits (1496), Expect = e-166
 Identities = 300/388 (77%), Positives = 324/388 (83%)
 Frame = +3

Query: 63   NCLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLN 242
            +CLP L                 G TLPGACNIPA V + NWFCEG+FNGNEKETMQFLN
Sbjct: 5    SCLPALSCRTSCSSRPCVPPSCHGCTLPGACNIPANVGNCNWFCEGSFNGNEKETMQFLN 64

Query: 243  DRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSEN 422
            DRLASY+EKVRQLER+NA              PLVCP YQ+YFRTIEELQQKIL  KSEN
Sbjct: 65   DRLASYMEKVRQLERENAELECRIQERNQQQDPLVCPAYQAYFRTIEELQQKILCAKSEN 124

Query: 423  ARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLK 602
            ARLVVQIDNAKLA+DDFRTKYQTEL +RQLVE+DINSLRR LDELTLCK+DLEAQVESL+
Sbjct: 125  ARLVVQIDNAKLASDDFRTKYQTELSMRQLVEADINSLRRILDELTLCKSDLEAQVESLR 184

Query: 603  EELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVE 782
            EELLCLK+NHE+EVN+LR QLGDRLN+EVDAAPTVDLN VL+ETR QYEALVETNRR+VE
Sbjct: 185  EELLCLKKNHEEEVNTLRCQLGDRLNVEVDAAPTVDLNRVLNETRCQYEALVETNRREVE 244

Query: 783  EWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETE 962
            EWF  Q+EELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQH +R+SLENTLTE+E
Sbjct: 245  EWFTTQSEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHCMRNSLENTLTESE 304

Query: 963  ARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESED 1142
            ARYSSQL+QVQ LI NVE+QL EIRADLERQNQEYQVLLDVRARLECEINTYR LLESED
Sbjct: 305  ARYSSQLSQVQCLITNVESQLGEIRADLERQNQEYQVLLDVRARLECEINTYRSLLESED 364

Query: 1143 CKLPSNPCATTNAQPIGHCVSSSCTPCG 1226
            C LP NPCATTNA        S C PCG
Sbjct: 365  CNLPCNPCATTNAS------GSCCGPCG 386


>ref|NP_001167570.1| keratin, type I cuticular Ha6 [Mus musculus].
          Length = 473

 Score =  513 bits (1322), Expect = e-145
 Identities = 265/375 (70%), Positives = 300/375 (80%), Gaps = 2/375 (0%)
 Frame = +3

Query: 132  GITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXX 311
            G  L   C+      SG WFCEGAFNGNEK TMQ LNDRLA+YLEKVRQLE++N      
Sbjct: 65   GSYLSSGCHSSGFAGSGGWFCEGAFNGNEKATMQILNDRLANYLEKVRQLEQENTQLECR 124

Query: 312  XXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQT 491
                     P +CP+YQSYF+T EELQQKIL  KSENARL++QIDNAKLAADDFRTKY+T
Sbjct: 125  IREWYECQIPYICPDYQSYFKTAEELQQKILLTKSENARLILQIDNAKLAADDFRTKYET 184

Query: 492  ELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGD 671
            EL LRQLVE+DIN LRR LDELTLCKADLEAQVESLKEELLCLK+NHE+EVN+LRSQLGD
Sbjct: 185  ELSLRQLVEADINGLRRILDELTLCKADLEAQVESLKEELLCLKRNHEEEVNALRSQLGD 244

Query: 672  RLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQS 851
            RLN+EVDAAP VDLN +L + R QYE LVE NRRDVE WF  QTEELN+QVVSSSEQLQ 
Sbjct: 245  RLNVEVDAAPPVDLNKILDDMRCQYETLVENNRRDVEAWFNTQTEELNQQVVSSSEQLQC 304

Query: 852  YQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAE 1031
             Q EIIELRRTVN+LE+ELQAQ ++R+SLE+TL ETEARYSSQL Q+Q LI NVE+QLAE
Sbjct: 305  CQTEIIELRRTVNSLEIELQAQQSMRNSLESTLAETEARYSSQLGQMQCLITNVESQLAE 364

Query: 1032 IRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCAT--TNAQPIGHCVS 1205
            IR DLERQN EYQVLLDV+ARLE EI TYR LL+ EDCKLP++PC+T    A  + +  S
Sbjct: 365  IRCDLERQNHEYQVLLDVKARLESEIATYRRLLDGEDCKLPAHPCSTECKPAVRVPYIPS 424

Query: 1206 SSCTPCGPRTCFQSC 1250
            ++CTP GP T    C
Sbjct: 425  TTCTPAGPCTPAGPC 439


>ref|NP_058576.2| keratin, type I cuticular Ha5 [Mus musculus].
          Length = 455

 Score =  509 bits (1312), Expect = e-144
 Identities = 264/361 (73%), Positives = 296/361 (81%)
 Frame = +3

Query: 174  SSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCP 353
            + G WF EG   GNEKETMQ LNDRLASYLEKVRQLE++NA              P +CP
Sbjct: 83   TGGGWFGEGILTGNEKETMQSLNDRLASYLEKVRQLEQENASLESRIREWCEQQVPYMCP 142

Query: 354  NYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINS 533
            +YQSYFRT+EELQ+K L  K+ENARLVVQIDNAKLAADDFRTKY+TE+ LRQLVE+DIN 
Sbjct: 143  DYQSYFRTMEELQKKTLCSKAENARLVVQIDNAKLAADDFRTKYETEVSLRQLVEADING 202

Query: 534  LRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDL 713
            LRR LD+LTLCKADLEAQVESLKEELLCLK+NHE+EVNSLR QLGDRLN+EVDAAP VDL
Sbjct: 203  LRRILDDLTLCKADLEAQVESLKEELLCLKKNHEEEVNSLRCQLGDRLNVEVDAAPPVDL 262

Query: 714  NSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNA 893
            N VL E R QYE LVE NRRD E+W+  QTEELN+QVVSSSEQLQS Q++IIELRRTVN+
Sbjct: 263  NRVLDEMRCQYETLVENNRRDAEDWYDTQTEELNQQVVSSSEQLQSCQSDIIELRRTVNS 322

Query: 894  LEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQV 1073
            LE+ELQAQ ++RD+L++TL ETE RYSSQLAQ+Q +IGNVE+QL EIRADLERQNQEYQV
Sbjct: 323  LEIELQAQQSMRDALDSTLAETEGRYSSQLAQMQCMIGNVESQLGEIRADLERQNQEYQV 382

Query: 1074 LLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPCGPRTCFQSCN 1253
            LLDVRARLECEINTYRGLLESED KLP NPCA        +  S SC PC P     SC+
Sbjct: 383  LLDVRARLECEINTYRGLLESEDSKLPCNPCAP------DYSSSKSCLPCLPAV---SCS 433

Query: 1254 T 1256
            T
Sbjct: 434  T 434


>ref|NP_001152846.2| keratin, type I cuticular Ha2 [Mus musculus].
          Length = 453

 Score =  498 bits (1283), Expect = e-141
 Identities = 257/370 (69%), Positives = 297/370 (80%)
 Frame = +3

Query: 144  PGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXX 323
            P  C I +++ +   FCEGAFNGNEKETMQ LNDRLA+YLEKVRQLE++NA         
Sbjct: 78   PTGC-ISSSMGTYGLFCEGAFNGNEKETMQVLNDRLANYLEKVRQLEKENAELEGKIQDV 136

Query: 324  XXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGL 503
                   +CP+YQSYF+TIEELQQK+L  K+ENAR++V IDNAKLAADDFRTKY+TEL L
Sbjct: 137  YQGQVLTMCPDYQSYFQTIEELQQKVLCTKAENARMIVHIDNAKLAADDFRTKYETELAL 196

Query: 504  RQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNI 683
            RQLVE+D N LRR LDELTL KADLEAQVESLKEELLCLK+NHE+EV  LR QLGDRLNI
Sbjct: 197  RQLVEADTNGLRRILDELTLNKADLEAQVESLKEELLCLKRNHEEEVGVLRQQLGDRLNI 256

Query: 684  EVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAE 863
            EVDAAP VDL  +L E R QYE +VETN RDVEEWF  Q EELNKQV +SSEQLQSYQ++
Sbjct: 257  EVDAAPPVDLTRMLEEMRCQYETMVETNHRDVEEWFNMQMEELNKQVATSSEQLQSYQSD 316

Query: 864  IIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRAD 1043
            II+LRRTVN LE+ELQAQH+LRDSLENTL ETE R++SQL+Q+Q +I NVE+QL++IR D
Sbjct: 317  IIDLRRTVNTLEIELQAQHSLRDSLENTLGETEGRFTSQLSQMQCMITNVESQLSDIRCD 376

Query: 1044 LERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTPC 1223
            LERQNQEY+VLLDV+ARLECEI+TYRGLLESED KLP NPC+T + QP       S T C
Sbjct: 377  LERQNQEYKVLLDVKARLECEIDTYRGLLESEDSKLPCNPCSTPSCQPCAPSPGVSRTVC 436

Query: 1224 GPRTCFQSCN 1253
             P T    C+
Sbjct: 437  VPHTVCVPCS 446


>ref|NP_001034755.1| keratin, type I cytoskeletal 40 [Mus musculus].
          Length = 439

 Score =  457 bits (1176), Expect = e-128
 Identities = 236/375 (62%), Positives = 278/375 (74%)
 Frame = +3

Query: 141  LPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXX 320
            L G CN P  V S  W  EG+FN NEKETMQFLNDRLASYLE+VR LE +NA        
Sbjct: 64   LAGGCNSPCLVGSCAWCEEGSFNSNEKETMQFLNDRLASYLERVRSLEENNAELECRIRE 123

Query: 321  XXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELG 500
                  PLVCP+YQ YF TIEELQQKIL  K+EN+RL VQ+DN KLAADDFR+KY++EL 
Sbjct: 124  QCEPNAPLVCPDYQRYFDTIEELQQKILCTKAENSRLAVQVDNCKLAADDFRSKYESELS 183

Query: 501  LRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLN 680
            LRQLVE+DI  LR  L ELTLCK+DLEA VES+K++L+CLK+ HE+EVN LR QLGDRL+
Sbjct: 184  LRQLVENDITGLRGILGELTLCKSDLEAHVESMKDDLICLKKGHEEEVNLLREQLGDRLS 243

Query: 681  IEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQA 860
            +E+D APTVDLN VL E R QYE ++  NRRD EEWFA QTEELN+Q  SS+EQL+  Q 
Sbjct: 244  VELDTAPTVDLNKVLDEMRCQYERVLANNRRDAEEWFAAQTEELNQQQKSSAEQLEGCQT 303

Query: 861  EIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRA 1040
            E++EL+R  N LE+ELQAQ  L +SLE T+ ETEA+YS+QLAQ+Q LI +VE QLAEIR 
Sbjct: 304  EMLELKRKANTLEIELQAQQTLTESLECTVAETEAQYSTQLAQMQCLIDSVEHQLAEIRC 363

Query: 1041 DLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTP 1220
            DLERQNQEYQVLLD +ARLECEINTYRGLLE ED +LP NP  +    P   C   S + 
Sbjct: 364  DLERQNQEYQVLLDTKARLECEINTYRGLLEKEDSRLPCNP-GSGAPMPNSTCEPCSNSM 422

Query: 1221 CGPRTCFQSCNTFGC 1265
            C P + +  C    C
Sbjct: 423  CEPCSAYVICTVENC 437


>ref|NP_998895.2| keratin, type I cytoskeletal 39 [Mus musculus].
          Length = 482

 Score =  419 bits (1078), Expect = e-117
 Identities = 213/327 (65%), Positives = 261/327 (79%)
 Frame = +3

Query: 192  CEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYF 371
            C    N +EKETMQ LN+RLA+YLEKVR LE +NA              P++CP+Y SY+
Sbjct: 83   CTEGINTHEKETMQILNERLANYLEKVRMLEGENADLEDKIQEACSKALPILCPDYLSYY 142

Query: 372  RTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLD 551
             TIEELQQKIL  K+EN+RLV QIDN KLAADD R  Y+ EL LRQLVE+D N L++ LD
Sbjct: 143  TTIEELQQKILCTKAENSRLVSQIDNTKLAADDLRANYEAELSLRQLVEADANGLKQILD 202

Query: 552  ELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSE 731
             LTL KADLEA+V+SL EELLCLK NHE+EVNSL+ QLGDR+NIEV AAP+VDLN +L E
Sbjct: 203  ALTLSKADLEARVQSLTEELLCLKTNHEEEVNSLQCQLGDRINIEVTAAPSVDLNQILQE 262

Query: 732  TRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQ 911
             R +YE+++ETNR+DVEEWF  Q EELN+QVVSSS+Q Q  Q +IIELRRT++ALE+ELQ
Sbjct: 263  MRCRYESIMETNRKDVEEWFNTQMEELNQQVVSSSQQQQCCQKDIIELRRTISALEIELQ 322

Query: 912  AQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRA 1091
            AQH +R+S E  LTETEARY++ LAQ+Q LI N+EAQ+A+IR+ L+RQ+QEY+VLLD+++
Sbjct: 323  AQHRMRESQECILTETEARYTALLAQIQSLIHNLEAQVADIRSALQRQSQEYEVLLDIKS 382

Query: 1092 RLECEINTYRGLLESEDCKLPSNPCAT 1172
            RLECEI TYR LLES D +LP NPCAT
Sbjct: 383  RLECEIATYRSLLESLDGRLPCNPCAT 409


>ref|NP_997648.2| keratin, type I cytoskeletal 42 [Mus musculus].
          Length = 452

 Score =  374 bits (960), Expect = e-103
 Identities = 193/345 (55%), Positives = 251/345 (72%)
 Frame = +3

Query: 153  CNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXX 332
            C++     S     +    G+EKETMQ LNDRLA+YL++VR LE  NA            
Sbjct: 73   CSLGGGFGSSFGVSDALLGGSEKETMQNLNDRLATYLDRVRALEEANADLEVKIREWYKK 132

Query: 333  XXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLRQL 512
              P    +Y  YF+TIE+L+ KIL+   +NA +V+QIDNA+LAADDFRTKY+TEL LR  
Sbjct: 133  QGPGPARDYSPYFKTIEDLRNKILAATIDNASIVLQIDNARLAADDFRTKYETELNLRMS 192

Query: 513  VESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVD 692
            VE+DIN LRR LDELTL +ADLE Q+ESLKEEL  L++NHE+E+N+LR Q+G  +N+E+D
Sbjct: 193  VEADINGLRRVLDELTLARADLEMQIESLKEELAYLRKNHEEEMNALRGQVGGDVNVEMD 252

Query: 693  AAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIE 872
            AAP VDL+ +L+E R QYE + E NR+D EEWF  +TEELN++V +++E LQS + EI E
Sbjct: 253  AAPGVDLSRILNEMRDQYEKMAEKNRKDAEEWFFTKTEELNREVATNTEALQSSRTEITE 312

Query: 873  LRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLER 1052
            LRR+V  LE+ELQ+Q +++ SLEN+L ETEARY +QLAQ+QGLI +VE QL E+R D+ER
Sbjct: 313  LRRSVQNLEIELQSQLSMKASLENSLAETEARYGAQLAQLQGLISSVEQQLCELRCDMER 372

Query: 1053 QNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQP 1187
            QN EYQVLLDV+ RLE EI TYR LLE ED  L +   ++  +QP
Sbjct: 373  QNHEYQVLLDVKTRLEQEIATYRRLLEGEDAHLATQYSSSLASQP 417


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 41,855,446
Number of extensions: 983003
Number of successful extensions: 6271
Number of sequences better than 1.0e-05: 97
Number of HSP's gapped: 5935
Number of HSP's successfully gapped: 99
Length of query: 527
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 421
Effective length of database: 12,433,743
Effective search space: 5234605803
Effective search space used: 5234605803
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012153
         (1581 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002270.1| keratin, type I cuticular Ha3-II [Homo sapiens].     618   e-177
Alignment   gi|NP_002268.2| keratin, type I cuticular Ha1 [Homo sapiens].        618   e-177
Alignment   gi|NP_004129.2| keratin, type I cuticular Ha3-I [Homo sapiens].      612   e-175
Alignment   gi|XP_003403930.1| PREDICTED: keratin, type I cuticular Ha4-lik...   585   e-167
Alignment   gi|NP_066293.2| keratin, type I cuticular Ha4 [Homo sapiens].        583   e-166
Alignment   gi|NP_003762.1| keratin, type I cuticular Ha6 [Homo sapiens].        518   e-147
Alignment   gi|NP_002269.3| keratin, type I cuticular Ha2 [Homo sapiens].        513   e-145
Alignment   gi|NP_002271.3| keratin, type I cuticular Ha5 [Homo sapiens].        513   e-145
Alignment   gi|NP_872303.2| keratin, type I cytoskeletal 40 [Homo sapiens].      447   e-125
Alignment   gi|NP_006762.3| keratin, type I cuticular Ha8 [Homo sapiens].        444   e-125

>ref|NP_002270.1| keratin, type I cuticular Ha3-II [Homo sapiens].
          Length = 404

 Score =  618 bits (1594), Expect = e-177
 Identities = 322/406 (79%), Positives = 347/406 (85%), Gaps = 3/406 (0%)
 Frame = +3

Query: 54   MPYN-CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYN CLP+L                 G TLPGACNIPA VS+ NWFCEG+FNG+EKETM
Sbjct: 1    MPYNFCLPSLSCRTSCSSRPCVPPSCHGYTLPGACNIPANVSNCNWFCEGSFNGSEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLERDNA              PL+CP+YQSYF+TIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERDNAELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCS 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLAADDFRTKYQTE  LRQLVESDINSLRR LDELTLC++DLEAQ+
Sbjct: 121  KSENARLVVQIDNAKLAADDFRTKYQTEQSLRQLVESDINSLRRILDELTLCRSDLEAQM 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELL LKQNHEQEVN+LR QLGDRLN+EVDAAP VDLN VL+ETR+QYEALVETNR
Sbjct: 181  ESLKEELLSLKQNHEQEVNTLRCQLGDRLNVEVDAAPAVDLNQVLNETRNQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            R+VE+WFA QTEELNKQVVSSSEQLQSYQAEIIELRRTVNALE+ELQAQHNLR SLENTL
Sbjct: 241  REVEQWFATQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEIELQAQHNLRYSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TE+EARYSSQL+QVQ LI NVE+QLAEIR+DLERQNQEYQVLLDVRARLECEINTYR LL
Sbjct: 301  TESEARYSSQLSQVQSLITNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRSLL 360

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVSSSCTPCGPRTCFQSCNTFG 1262
            ESEDCKLPSNPCATTNA  +PIG CV++   PCGPR+    CNTFG
Sbjct: 361  ESEDCKLPSNPCATTNACEKPIGSCVTN---PCGPRSRCGPCNTFG 403


>ref|NP_002268.2| keratin, type I cuticular Ha1 [Homo sapiens].
          Length = 416

 Score =  618 bits (1594), Expect = e-177
 Identities = 323/414 (78%), Positives = 345/414 (83%), Gaps = 12/414 (2%)
 Frame = +3

Query: 54   MPYN-CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            MPYN CLP+L                   TLPGACNIPA VS+ NWFCEG+FNG+EKETM
Sbjct: 1    MPYNFCLPSLSCRTSCSSRPCVPPSCHSCTLPGACNIPANVSNCNWFCEGSFNGSEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLERDNA              PL+CP+YQSYF+TIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERDNAELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCT 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLAADDFRTKYQTEL LRQLVESDIN LRR LDELTLCK+DLEAQV
Sbjct: 121  KSENARLVVQIDNAKLAADDFRTKYQTELSLRQLVESDINGLRRILDELTLCKSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELLCLK NHEQEVN+LR QLGDRLN+EVDAAPTVDLN VL+ETRSQYEALVETNR
Sbjct: 181  ESLKEELLCLKSNHEQEVNTLRCQLGDRLNVEVDAAPTVDLNRVLNETRSQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            R+VE+WF  QTEELNKQVVSSSEQLQSYQAEIIELRRTVNALE+ELQAQHNLRDSLENTL
Sbjct: 241  REVEQWFTTQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEIELQAQHNLRDSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TE+EARYSSQL+QVQ LI NVE+QLAEIR+DLERQNQEYQVLLDVRARLECEINTYR LL
Sbjct: 301  TESEARYSSQLSQVQSLITNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRSLL 360

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVS---------SSCTPCGPRTCFQSCNTF 1259
            ESEDC LPSNPCATTNA  +PIG C+S         + CTPC PR     CN+F
Sbjct: 361  ESEDCNLPSNPCATTNACSKPIGPCLSNPCTSCVPPAPCTPCAPRPRCGPCNSF 414


>ref|NP_004129.2| keratin, type I cuticular Ha3-I [Homo sapiens].
          Length = 404

 Score =  612 bits (1577), Expect = e-175
 Identities = 320/406 (78%), Positives = 344/406 (84%), Gaps = 3/406 (0%)
 Frame = +3

Query: 54   MPYNC-LPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETM 230
            M Y+C LP+L                 G TLPGACNIPA VS+ NWFCEG+FNG+EKETM
Sbjct: 1    MSYSCGLPSLSCRTSCSSRPCVPPSCHGCTLPGACNIPANVSNCNWFCEGSFNGSEKETM 60

Query: 231  QFLNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSG 410
            QFLNDRLASYLEKVRQLERDNA              PLVC +YQSYF+TIEELQQKIL  
Sbjct: 61   QFLNDRLASYLEKVRQLERDNAELENLIRERSQQQEPLVCASYQSYFKTIEELQQKILCS 120

Query: 411  KSENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQV 590
            KSENARLVVQIDNAKLA+DDFRTKY+TEL LRQLVESDIN LRR LDELTLC++DLEAQV
Sbjct: 121  KSENARLVVQIDNAKLASDDFRTKYETELSLRQLVESDINGLRRILDELTLCRSDLEAQV 180

Query: 591  ESLKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNR 770
            ESLKEELLCLKQNHEQEVN+LR QLGDRLN+EVDAAPTVDLN VL+ETRSQYEALVETNR
Sbjct: 181  ESLKEELLCLKQNHEQEVNTLRCQLGDRLNVEVDAAPTVDLNQVLNETRSQYEALVETNR 240

Query: 771  RDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTL 950
            R+VE+WFA QTEELNKQVVSSSEQLQSYQAEIIELRRTVNALE+ELQAQHNLRDSLENTL
Sbjct: 241  REVEQWFATQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEIELQAQHNLRDSLENTL 300

Query: 951  TETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLL 1130
            TE+EARYSSQL+QVQ LI NVE+QLAEIR+DLERQNQEYQVLLDVRARLECEINTYR LL
Sbjct: 301  TESEARYSSQLSQVQRLITNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRSLL 360

Query: 1131 ESEDCKLPSNPCATTNA--QPIGHCVSSSCTPCGPRTCFQSCNTFG 1262
            ESEDCKLPSNPCATTNA  +  G C+S+   PCG R     CNTFG
Sbjct: 361  ESEDCKLPSNPCATTNACDKSTGPCISN---PCGLRARCGPCNTFG 403


>ref|XP_003403930.1| PREDICTED: keratin, type I cuticular Ha4-like [Homo sapiens].
          Length = 436

 Score =  585 bits (1509), Expect = e-167
 Identities = 300/387 (77%), Positives = 327/387 (84%)
 Frame = +3

Query: 66   CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLND 245
            CLP+L                 G TLPGACNIPA VS+ NWFCEG+FNG+EKETMQFLND
Sbjct: 48   CLPSLGCRTSCSSRPCVPPSCHGYTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLND 107

Query: 246  RLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENA 425
            RLASYLEKVRQLERDNA              PL+CP+YQSYF+TIEELQQKIL  K+ENA
Sbjct: 108  RLASYLEKVRQLERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENA 167

Query: 426  RLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKE 605
            RLVV IDNAKLA+DDFR+KYQTE  LR LVESDINS+RR LDELTLCK+DLE+QVESL+E
Sbjct: 168  RLVVNIDNAKLASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLRE 227

Query: 606  ELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEE 785
            EL+CLK+NHE+EVN+LRSQLGDRLN+EVD APTVDLN VL+ETRSQYEALVETNRR+VE+
Sbjct: 228  ELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPTVDLNQVLNETRSQYEALVETNRREVEQ 287

Query: 786  WFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA 965
            WFA QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQHNLRDSLENTLTE+EA
Sbjct: 288  WFATQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEA 347

Query: 966  RYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDC 1145
             YSSQL+QVQ LI NVE+QLAEIR DLERQNQEYQVLLDVRARLECEINTYR LLESEDC
Sbjct: 348  HYSSQLSQVQSLITNVESQLAEIRCDLERQNQEYQVLLDVRARLECEINTYRSLLESEDC 407

Query: 1146 KLPSNPCATTNAQPIGHCVSSSCTPCG 1226
            KLP NPCATTNA        +SC PCG
Sbjct: 408  KLPCNPCATTNAS------GNSCGPCG 428


>ref|NP_066293.2| keratin, type I cuticular Ha4 [Homo sapiens].
          Length = 436

 Score =  583 bits (1503), Expect = e-166
 Identities = 299/387 (77%), Positives = 326/387 (84%)
 Frame = +3

Query: 66   CLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLND 245
            CLP+L                 G TLPGACNIPA VS+ NWFCEG+FNG+EKETMQFLND
Sbjct: 48   CLPSLGCRTSCSSRPCVPPSCHGYTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLND 107

Query: 246  RLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENA 425
            RLASYLEKVRQLERDNA              PL+CP+YQSYF+TIEELQQKIL  K+ENA
Sbjct: 108  RLASYLEKVRQLERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENA 167

Query: 426  RLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKE 605
            RLVV IDNAKLA+DDFR+KYQTE  LR LVESDINS+RR LDELTLCK+DLE+QVESL+E
Sbjct: 168  RLVVNIDNAKLASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLRE 227

Query: 606  ELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEE 785
            EL+CLK+NHE+EVN+LRSQLGDRLN+EVD APTVDLN VL+ETRSQYEALVE NRR+VE+
Sbjct: 228  ELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPTVDLNQVLNETRSQYEALVEINRREVEQ 287

Query: 786  WFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEA 965
            WFA QTEELNKQVVSSSEQLQS QAEIIELRRTVNALE+ELQAQHNLRDSLENTLTE+EA
Sbjct: 288  WFATQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEA 347

Query: 966  RYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDC 1145
             YSSQL+QVQ LI NVE+QLAEIR DLERQNQEYQVLLDVRARLECEINTYR LLESEDC
Sbjct: 348  HYSSQLSQVQSLITNVESQLAEIRCDLERQNQEYQVLLDVRARLECEINTYRSLLESEDC 407

Query: 1146 KLPSNPCATTNAQPIGHCVSSSCTPCG 1226
            KLP NPCATTNA        +SC PCG
Sbjct: 408  KLPCNPCATTNAS------GNSCGPCG 428


>ref|NP_003762.1| keratin, type I cuticular Ha6 [Homo sapiens].
          Length = 467

 Score =  518 bits (1333), Expect = e-147
 Identities = 270/371 (72%), Positives = 301/371 (81%), Gaps = 5/371 (1%)
 Frame = +3

Query: 132  GITLPGA-----CNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNA 296
            G  LPG+     C+    V SG WFCEG+FNG+EKETMQFLNDRLA+YLEKVRQLER+NA
Sbjct: 60   GSCLPGSYLSSECHTSGFVGSGGWFCEGSFNGSEKETMQFLNDRLANYLEKVRQLERENA 119

Query: 297  XXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFR 476
                          P +CP+YQSYF+TIE+ QQKIL  KSENARLV+QIDNAKLAADDFR
Sbjct: 120  ELESRIQEWYEFQIPYICPDYQSYFKTIEDFQQKILLTKSENARLVLQIDNAKLAADDFR 179

Query: 477  TKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLR 656
            TKY+TEL LRQLVE+DIN LRR LDELTLCKADLEAQVESLKEEL+CLK+NHE+EV+ LR
Sbjct: 180  TKYETELSLRQLVEADINGLRRILDELTLCKADLEAQVESLKEELMCLKKNHEEEVSVLR 239

Query: 657  SQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSS 836
             QLGDRLN+EVDAAP VDLN +L + R QYEALVE NRRDVE WF  QTEELN+QVVSSS
Sbjct: 240  CQLGDRLNVEVDAAPPVDLNKILEDMRCQYEALVENNRRDVEAWFNTQTEELNQQVVSSS 299

Query: 837  EQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVE 1016
            EQLQ  Q EIIELRRTVNALE+ELQAQH++R+SLE+TL ETEARYSSQLAQ+Q LI NVE
Sbjct: 300  EQLQCCQTEIIELRRTVNALEIELQAQHSMRNSLESTLAETEARYSSQLAQMQCLISNVE 359

Query: 1017 AQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGH 1196
            AQL+EIR DLERQNQEYQVLLDV+ARLE EI TYR LLE EDCKLP  PCAT   +P+  
Sbjct: 360  AQLSEIRCDLERQNQEYQVLLDVKARLEGEIATYRHLLEGEDCKLPPQPCATA-CKPVIR 418

Query: 1197 CVSSSCTPCGP 1229
              S    PC P
Sbjct: 419  VPSVPPVPCVP 429


>ref|NP_002269.3| keratin, type I cuticular Ha2 [Homo sapiens].
          Length = 448

 Score =  513 bits (1322), Expect = e-145
 Identities = 270/402 (67%), Positives = 308/402 (76%), Gaps = 3/402 (0%)
 Frame = +3

Query: 57   PYNCLPNLXXXXXXXXXXXXXXXXQGITLPGACNIPATVSSGNWFCEGAFNGNEKETMQF 236
            P  CLP++                   +   A  I  ++  G+W+ EGAFNGNEKETMQF
Sbjct: 43   PMACLPSVCLPTTFRPASCLSKTYLSSSCQAASGISGSMGPGSWYSEGAFNGNEKETMQF 102

Query: 237  LNDRLASYLEKVRQLERDNAXXXXXXXXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKS 416
            LNDRLASYL +VRQLE++NA                + P+YQS+FRTIEELQQKIL  K+
Sbjct: 103  LNDRLASYLTRVRQLEQENAELESRIQEASHSQVLTMTPDYQSHFRTIEELQQKILCTKA 162

Query: 417  ENARLVVQIDNAKLAADDFRTKYQTELGLRQLVESDINSLRRTLDELTLCKADLEAQVES 596
            ENAR+VV IDNAKLAADDFR KY+ EL +RQLVE+DIN LRR LD+LTLCKADLEAQVES
Sbjct: 163  ENARMVVNIDNAKLAADDFRAKYEAELAMRQLVEADINGLRRILDDLTLCKADLEAQVES 222

Query: 597  LKEELLCLKQNHEQEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEALVETNRRD 776
            LKEEL+CLK+NHE+EV SLR QLGDRLNIEVDAAP VDL  VL E R QYEA+VE NRRD
Sbjct: 223  LKEELMCLKKNHEEEVGSLRCQLGDRLNIEVDAAPPVDLTRVLEEMRCQYEAMVEANRRD 282

Query: 777  VEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRDSLENTLTE 956
            VEEWF  Q EELN+QV +SSEQLQ+YQ++II+LRRTVN LE+ELQAQH+LRDSLENTLTE
Sbjct: 283  VEEWFNMQMEELNQQVATSSEQLQNYQSDIIDLRRTVNTLEIELQAQHSLRDSLENTLTE 342

Query: 957  TEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLES 1136
            +EARYSSQLAQ+Q +I NVEAQLAEIRADLERQNQEYQVLLDVRARLE EINTYR LLE+
Sbjct: 343  SEARYSSQLAQMQCMITNVEAQLAEIRADLERQNQEYQVLLDVRARLEGEINTYRSLLEN 402

Query: 1137 EDCKLPSNPCATTNAQPIGHCVSSSCTP---CGPRTCFQSCN 1253
            EDCKLP NPC+T +      CV S C P   C PRT    C+
Sbjct: 403  EDCKLPCNPCSTPSCTT---CVPSPCVPRTVCVPRTVGMPCS 441


>ref|NP_002271.3| keratin, type I cuticular Ha5 [Homo sapiens].
          Length = 455

 Score =  513 bits (1321), Expect = e-145
 Identities = 271/378 (71%), Positives = 299/378 (79%), Gaps = 1/378 (0%)
 Frame = +3

Query: 135  ITLPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXX 314
            + LP      +    G WF EG   GNEKETMQ LNDRLA YLEKVRQLE++NA      
Sbjct: 70   LCLPAGGFATSYSGGGGWFGEGILTGNEKETMQSLNDRLAGYLEKVRQLEQENASLESRI 129

Query: 315  XXXXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTE 494
                    P +CP+YQSYFRTIEELQ+K L  K+ENARLVV+IDNAKLAADDFRTKY+TE
Sbjct: 130  REWCEQQVPYMCPDYQSYFRTIEELQKKTLCSKAENARLVVEIDNAKLAADDFRTKYETE 189

Query: 495  LGLRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDR 674
            + LRQLVESDIN LRR LD+LTLCK+DLEAQVESLKEELLCLK+NHE+EVNSLR QLGDR
Sbjct: 190  VSLRQLVESDINGLRRILDDLTLCKSDLEAQVESLKEELLCLKKNHEEEVNSLRCQLGDR 249

Query: 675  LNIEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSY 854
            LN+EVDAAP VDLN VL E R QYE LVE NRRD E+W   Q+EELN+QVVSSSEQLQS 
Sbjct: 250  LNVEVDAAPPVDLNRVLEEMRCQYETLVENNRRDAEDWLDTQSEELNQQVVSSSEQLQSC 309

Query: 855  QAEIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEI 1034
            QAEIIELRRTVNALE+ELQAQH++RD+LE+TL ETEARYSSQLAQ+Q +I NVEAQLAEI
Sbjct: 310  QAEIIELRRTVNALEIELQAQHSMRDALESTLAETEARYSSQLAQMQCMITNVEAQLAEI 369

Query: 1035 RADLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSC 1214
            RADLERQNQEYQVLLDVRARLECEINTYRGLLESED KLP NPCA        +  S SC
Sbjct: 370  RADLERQNQEYQVLLDVRARLECEINTYRGLLESEDSKLPCNPCAP------DYSPSKSC 423

Query: 1215 TPCGP-RTCFQSCNTFGC 1265
             PC P  +C  S     C
Sbjct: 424  LPCLPAASCGPSAARTNC 441


>ref|NP_872303.2| keratin, type I cytoskeletal 40 [Homo sapiens].
          Length = 431

 Score =  447 bits (1149), Expect = e-125
 Identities = 233/374 (62%), Positives = 282/374 (75%), Gaps = 1/374 (0%)
 Frame = +3

Query: 147  GACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXXXX 326
            G+CN P  V +  W  +G F  NEKETMQFLNDRLASYLEKVR LE  NA          
Sbjct: 66   GSCNSPCLVGNCAWCEDGVFTSNEKETMQFLNDRLASYLEKVRSLEETNAELESRIQEQC 125

Query: 327  XXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELGLR 506
                P+VCP+YQ YF TIE+LQQKIL  K+EN+RL VQ+DN KLA DDF++KY++EL LR
Sbjct: 126  EQDIPMVCPDYQRYFNTIEDLQQKILCTKAENSRLAVQLDNCKLATDDFKSKYESELSLR 185

Query: 507  QLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLNIE 686
            QL+E+DI+SL   L+ELTLCK+DLEA VESLKE+LLCLK+NHE+EVN LR QLGDRL++E
Sbjct: 186  QLLEADISSLHGILEELTLCKSDLEAHVESLKEDLLCLKKNHEEEVNLLREQLGDRLSVE 245

Query: 687  VDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEI 866
            +D APT+DLN VL E R Q E ++  NRR+ EEW A QTEELN+Q +SS+EQLQ  Q EI
Sbjct: 246  LDTAPTLDLNRVLDEMRCQCETVLANNRREAEEWLAVQTEELNQQQLSSAEQLQGCQMEI 305

Query: 867  IELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADL 1046
            +EL+RT +ALE+ELQAQ +L +SLE T+ ETEA+YSSQLAQ+Q LI N+E QLAEIR DL
Sbjct: 306  LELKRTASALEIELQAQQSLTESLECTVAETEAQYSSQLAQIQCLIDNLENQLAEIRCDL 365

Query: 1047 ERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSS-SCTPC 1223
            ERQNQEYQVLLDV+ARLE EINTY GLL+SED +L  +PC+TT       C SS +C PC
Sbjct: 366  ERQNQEYQVLLDVKARLEGEINTYWGLLDSEDSRLSCSPCSTT-------CTSSNTCEPC 418

Query: 1224 GPRTCFQSCNTFGC 1265
               + +  C    C
Sbjct: 419  ---SAYVICTVENC 429


>ref|NP_006762.3| keratin, type I cuticular Ha8 [Homo sapiens].
          Length = 456

 Score =  444 bits (1143), Expect = e-125
 Identities = 234/374 (62%), Positives = 281/374 (75%), Gaps = 4/374 (1%)
 Frame = +3

Query: 141  LPGACNIPATVSSGNWFCEGAFNGNEKETMQFLNDRLASYLEKVRQLERDNAXXXXXXXX 320
            LPG C+IP  +     + E   NG+EKETMQFLNDRLA+YLEKVRQLE++NA        
Sbjct: 79   LPGTCHIPGNIGICGAYGENTLNGHEKETMQFLNDRLANYLEKVRQLEQENAELEATLLE 138

Query: 321  XXXXXXPLVCPNYQSYFRTIEELQQKILSGKSENARLVVQIDNAKLAADDFRTKYQTELG 500
                    VCP+YQSYF TIEELQQKIL  K+ENARL+VQIDNAKLAADDFR K ++E  
Sbjct: 139  RSKCHESTVCPDYQSYFHTIEELQQKILCSKAENARLIVQIDNAKLAADDFRIKLESERS 198

Query: 501  LRQLVESDINSLRRTLDELTLCKADLEAQVESLKEELLCLKQNHEQEVNSLRSQLGDRLN 680
            LRQLVE+D    ++ LD+ TL KADLEAQ ESLKEE L LK NHEQEV  LRSQLG++L 
Sbjct: 199  LRQLVEADKCGTQKLLDDATLAKADLEAQQESLKEEQLSLKSNHEQEVKILRSQLGEKLR 258

Query: 681  IEVDAAPTVDLNSVLSETRSQYEALVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQA 860
            IE+D  PT+DLN VL E R+QYEA++ETNR+DVE+WF  Q+E ++ Q +S SE+LQ  Q+
Sbjct: 259  IELDIEPTIDLNRVLGEMRAQYEAMLETNRQDVEQWFQAQSEGISLQDMSCSEELQCCQS 318

Query: 861  EIIELRRTVNALEVELQAQHNLRDSLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRA 1040
            EI+ELR TVNALEVE QAQH L+D L+N+L E E R+ ++LAQ+Q LI NVE QL+EIRA
Sbjct: 319  EILELRCTVNALEVERQAQHTLKDCLQNSLCEAEDRFGTELAQMQSLISNVEEQLSEIRA 378

Query: 1041 DLERQNQEYQVLLDVRARLECEINTYRGLLESEDCKLPSNPCATTNAQPIGHCVSSSCTP 1220
            DLERQNQEYQVLLDV+ RLE EI TYR LLESEDCKLP NPC+T+ +     CV++ C P
Sbjct: 379  DLERQNQEYQVLLDVKTRLENEIATYRNLLESEDCKLPCNPCSTSPS-----CVTAPCAP 433

Query: 1221 ---CGP-RTCFQSC 1250
               CGP  TC  +C
Sbjct: 434  RPSCGPCTTCGPTC 447


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 49,583,781
Number of extensions: 1179305
Number of successful extensions: 7727
Number of sequences better than 1.0e-05: 110
Number of HSP's gapped: 7428
Number of HSP's successfully gapped: 112
Length of query: 527
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 420
Effective length of database: 14,770,016
Effective search space: 6203406720
Effective search space used: 6203406720
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012153
         (1581 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr12                                                         797   0.0  

>Sscrofa_Chr12 
||          Length = 63588571

 Score =  797 bits (402), Expect = 0.0
 Identities = 425/432 (98%), Gaps = 1/432 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1148     gctgcccagcaacccctgcgccacgaccaacgcacagcctattgggcactgcgtcagcag 1207
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21376567 gctgcccagcaacccctgcgccacgaccaacgcacagcctattgggcactgcgtcagcag 21376508

                                                                            
Query: 1208     ttcctgcaccccttgtggccctcgcacctgcttccagtcctgtaacacctttgggtgcta 1267
                |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 21376507 ttcctgcaccccttgtggccctcgcacctgcttcaagtcctgtaacacctttgggtgcta 21376448

                                                                            
Query: 1268     gatggctggcgcccgcaggaggattgtgcaaagacgaaagaccggtgagggaccagccct 1327
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21376447 gatggctggcgcccgcaggaggattgtgcaaagacgaaagaccggtgagggaccagccct 21376388

                                                                            
Query: 1328     gctctctgtccaccatcaggctgtagaccccactccaggcatccccataactcatggtct 1387
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21376387 gctctctgtccaccatcaggctgtagaccccactccaggcatccccataactcatggtct 21376328

                                                                            
Query: 1388     gcaaggagaatgtccaggctcacctgatcttcttccttcgacgccgctctcttgtagtta 1447
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21376327 gcaaggagaatgtccaggctcacctgatcttcttccttcgacgccgctctcttgtagtta 21376268

                                                                            
Query: 1448     tcccgtgacctgatggtctgacatgtttgggctgggaacgcatgcggttgtgtgaatctt 1507
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 21376267 tcccgtgacctgatggtctgacatgtttgggctgggaacgcatgcggttgtgtgattctt 21376208

                                                                            
Query: 1508     tctgttgcttcgacctgtctgggagctctcc-aatccctctataantcgnctaataaata 1566
                |||||||||||||||||||||| |||||||| ||||||| ||||| ||| ||||||||||
Sbjct: 21376207 tctgttgcttcgacctgtctggtagctctccaaatccctttataaatcgcctaataaata 21376148

                            
Query: 1567     ttcctcttgcaa 1578
                ||||||||||||
Sbjct: 21376147 ttcctcttgcaa 21376136



 Score =  759 bits (383), Expect = 0.0
 Identities = 397/399 (99%), Gaps = 2/399 (0%)
 Strand = Plus / Minus

                                                                            
Query: 2        agagaaaag-aatcaggctttgaa-catcttccagctctgctccctccagcatcatgcct 59
                ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 21383384 agagaaaaggaatcaggctttgaaacatcttccagctctgctccctccagcatcatgcct 21383325

                                                                            
Query: 60       tacaactgcctgcccaacctgagctgccgctccagctcttcctccaggccctgcgtgccc 119
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21383324 tacaactgcctgcccaacctgagctgccgctccagctcttcctccaggccctgcgtgccc 21383265

                                                                            
Query: 120      tccagctgccagggtatcaccctacccggagcctgcaacatccctgccactgtgagcagc 179
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21383264 tccagctgccagggtatcaccctacccggagcctgcaacatccctgccactgtgagcagc 21383205

                                                                            
Query: 180      ggcaactggttctgcgagggcgccttcaatggcaacgagaaggagaccatgcagtttctg 239
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21383204 ggcaactggttctgcgagggcgccttcaatggcaacgagaaggagaccatgcagtttctg 21383145

                                                                            
Query: 240      aacgaccggctggccagctacctggagaaggtgcgccagctggagcgggacaacgcggag 299
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21383144 aacgaccggctggccagctacctggagaaggtgcgccagctggagcgggacaacgcggag 21383085

                                                                            
Query: 300      ctggagaggcagatccaggagcggtctcagcagcaggagcccctggtgtgtcccaactac 359
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21383084 ctggagaggcagatccaggagcggtctcagcagcaggagcccctggtgtgtcccaactac 21383025

                                                       
Query: 360      cagtcctacttccggaccatcgaggagctccagcagaag 398
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 21383024 cagtcctacttccggaccatcgaggagctccagcagaag 21382986



 Score =  680 bits (343), Expect = 0.0
 Identities = 352/355 (99%)
 Strand = Plus / Minus

                                                                            
Query: 44       ctccagcatcatgccttacaactgcctgcccaacctgagctgccgctccagctcttcctc 103
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 21368184 ctccagcatcatgccttacaactgcctgcccaacctgagctgccgctccagctcctcctc 21368125

                                                                            
Query: 104      caggccctgcgtgccctccagctgccagggtatcaccctacccggagcctgcaacatccc 163
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21368124 taggccctgcgtgccctccagctgccagggtatcaccctacccggagcctgcaacatccc 21368065

                                                                            
Query: 164      tgccactgtgagcagcggcaactggttctgcgagggcgccttcaatggcaacgagaagga 223
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21368064 tgccactgtgagcagcggcaactggttctgcgagggcgccttcaatggcaacgagaagga 21368005

                                                                            
Query: 224      gaccatgcagtttctgaacgaccggctggccagctacctggagaaggtgcgccagctgga 283
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21368004 gaccatgcagtttctgaacgaccggctggccagctacctggagaaggtgcgccagctgga 21367945

                                                                            
Query: 284      gcgggacaacgcggagctggagaggcagatccaggagcggtctcagcagcaggagcccct 343
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21367944 gcgggacaacgcagagctggagaggcagatccaggagcggtctcagcagcaggagcccct 21367885

                                                                       
Query: 344      ggtgtgtcccaactaccagtcctacttccggaccatcgaggagctccagcagaag 398
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21367884 ggtgtgtcccaactaccagtcctacttccggaccatcgaggagctccagcagaag 21367830



 Score =  656 bits (331), Expect = 0.0
 Identities = 354/361 (98%), Gaps = 3/361 (0%)
 Strand = Plus / Minus

                                                                            
Query: 41       tccctccagcatcatgccttacaact---gcctgcccaacctgagctgccgctccagctc 97
                ||||| ||||||||||||||||| ||   |||||||||||||||||||||||||||||||
Sbjct: 21408852 tccctgcagcatcatgccttacagcttctgcctgcccaacctgagctgccgctccagctc 21408793

                                                                            
Query: 98       ttcctccaggccctgcgtgccctccagctgccagggtatcaccctacccggagcctgcaa 157
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21408792 ctcctccaggccctgcgtgccctccagctgccagggtatcaccctacccggagcctgcaa 21408733

                                                                            
Query: 158      catccctgccactgtgagcagcggcaactggttctgcgagggcgccttcaatggcaacga 217
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21408732 catccccgccactgtgagcagcggcaactggttctgcgagggcgccttcaatggcaacga 21408673

                                                                            
Query: 218      gaaggagaccatgcagtttctgaacgaccggctggccagctacctggagaaggtgcgcca 277
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21408672 gaaggagaccatgcagtttctgaacgaccggctggccagctacctggagaaggtgcgcca 21408613

                                                                            
Query: 278      gctggagcgggacaacgcggagctggagaggcagatccaggagcggtctcagcagcagga 337
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21408612 gctggagcgggacaacgcggagctggagaggcagatccaggagcggtctcagcagcagga 21408553

                                                                            
Query: 338      gcccctggtgtgtcccaactaccagtcctacttccggaccatcgaggagctccagcagaa 397
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21408552 gcccctggtgtgtcccaactaccagtcctacttccggaccatcgaggagctccagcagaa 21408493

                 
Query: 398      g 398
                |
Sbjct: 21408492 g 21408492



 Score =  599 bits (302), Expect = e-168
 Identities = 326/334 (97%)
 Strand = Plus / Minus

                                                                            
Query: 65       ctgcctgcccaacctgagctgccgctccagctcttcctccaggccctgcgtgccctccag 124
                ||||||||||||||||||||||||||| ||||  |||||||||||||| |||||||||||
Sbjct: 21396486 ctgcctgcccaacctgagctgccgctctagctgctcctccaggccctgtgtgccctccag 21396427

                                                                            
Query: 125      ctgccagggtatcaccctacccggagcctgcaacatccctgccactgtgagcagcggcaa 184
                |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||
Sbjct: 21396426 ctgccagggtatcaccctacccggggcccgcaacatccccgccactgtgagcagcggcaa 21396367

                                                                            
Query: 185      ctggttctgcgagggcgccttcaatggcaacgagaaggagaccatgcagtttctgaacga 244
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21396366 ctggttctgcgagggcgccttcaatggcaacgagaaggagaccatgcagtttctgaacga 21396307

                                                                            
Query: 245      ccggctggccagctacctggagaaggtgcgccagctggagcgggacaacgcggagctgga 304
                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 21396306 ccggctggccagctacctggagaaggtgcgccagctggagcgggacaacgcagagctgga 21396247

                                                                            
Query: 305      gaggcagatccaggagcggtctcagcagcaggagcccctggtgtgtcccaactaccagtc 364
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21396246 gaggcagatccaggagcggtctcagcagcaggagcccctggtgtgtcccaactaccagtc 21396187

                                                  
Query: 365      ctacttccggaccatcgaggagctccagcagaag 398
                ||||||||||||||||||||||||||||||||||
Sbjct: 21396186 ctacttccggaccatcgaggagctccagcagaag 21396153



 Score =  442 bits (223), Expect = e-121
 Identities = 223/223 (100%)
 Strand = Plus / Minus

                                                                            
Query: 926      gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 985
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21364283 gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 21364224

                                                                            
Query: 986      ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 1045
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21364223 ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 21364164

                                                                            
Query: 1046     ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 1105
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21364163 ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 21364104

                                                           
Query: 1106     gatcaacacgtaccgggggctgctggagagcgaggactgcaag 1148
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21364103 gatcaacacgtaccgggggctgctggagagcgaggactgcaag 21364061



 Score =  442 bits (223), Expect = e-121
 Identities = 223/223 (100%)
 Strand = Plus / Minus

                                                                            
Query: 926      gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 985
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21377700 gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 21377641

                                                                            
Query: 986      ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 1045
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21377640 ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 21377581

                                                                            
Query: 1046     ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 1105
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21377580 ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 21377521

                                                           
Query: 1106     gatcaacacgtaccgggggctgctggagagcgaggactgcaag 1148
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21377520 gatcaacacgtaccgggggctgctggagagcgaggactgcaag 21377478



 Score =  442 bits (223), Expect = e-121
 Identities = 223/223 (100%)
 Strand = Plus / Minus

                                                                            
Query: 926      gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 985
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21392874 gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 21392815

                                                                            
Query: 986      ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 1045
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21392814 ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 21392755

                                                                            
Query: 1046     ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 1105
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21392754 ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 21392695

                                                           
Query: 1106     gatcaacacgtaccgggggctgctggagagcgaggactgcaag 1148
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21392694 gatcaacacgtaccgggggctgctggagagcgaggactgcaag 21392652



 Score =  442 bits (223), Expect = e-121
 Identities = 223/223 (100%)
 Strand = Plus / Minus

                                                                            
Query: 926      gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 985
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21406142 gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 21406083

                                                                            
Query: 986      ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 1045
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21406082 ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 21406023

                                                                            
Query: 1046     ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 1105
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21406022 ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 21405963

                                                           
Query: 1106     gatcaacacgtaccgggggctgctggagagcgaggactgcaag 1148
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21405962 gatcaacacgtaccgggggctgctggagagcgaggactgcaag 21405920



 Score =  434 bits (219), Expect = e-119
 Identities = 222/223 (99%)
 Strand = Plus / Minus

                                                                            
Query: 926      gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 985
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21436262 gagggactctctggagaacacgctgacggagacggaggcccgctacagctcgcagctggc 21436203

                                                                            
Query: 986      ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 1045
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21436202 ccaggtgcagggcctgatcggcaacgtggaggctcagctggcggagatccgggctgacct 21436143

                                                                            
Query: 1046     ggagcgtcagaaccaggagtaccaggtgctgctggacgtgcgggcccggctggagtgtga 1105
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21436142 ggagcgtcagaaccaggagtaccaggtgctgctggatgtgcgggcccggctggagtgtga 21436083

                                                           
Query: 1106     gatcaacacgtaccgggggctgctggagagcgaggactgcaag 1148
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21436082 gatcaacacgtaccgggggctgctggagagcgaggactgcaag 21436040



 Score =  359 bits (181), Expect = 3e-96
 Identities = 193/197 (97%)
 Strand = Plus / Minus

                                                                            
Query: 952      cggagacggaggcccgctacagctcgcagctggcccaggtgcagggcctgatcggcaacg 1011
                |||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 21448695 cggagacggaggcccgctacagctcgcagctggcccagatgcaaggcctgattggcaacg 21448636

                                                                            
Query: 1012     tggaggctcagctggcggagatccgggctgacctggagcgtcagaaccaggagtaccagg 1071
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21448635 tggaggctcagctggcggagatccgggctgacctggagcgtcagaaccaggagtaccagg 21448576

                                                                            
Query: 1072     tgctgctggacgtgcgggcccggctggagtgtgagatcaacacgtaccgggggctgctgg 1131
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 21448575 tgctgctggacgtgcgggcccggctggagagtgagatcaacacgtaccgggggctgctgg 21448516

                                 
Query: 1132     agagcgaggactgcaag 1148
                |||||||||||||||||
Sbjct: 21448515 agagcgaggactgcaag 21448499



 Score =  319 bits (161), Expect = 3e-84
 Identities = 164/165 (99%)
 Strand = Plus / Minus

                                                                            
Query: 636      caggaagtcaactccctccggagccagctcggggaccgcctcaacatcgaggtggacgcc 695
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21364843 caggaagtcaactccctccggagccagctcggggaccgcctcaacatcgaggtggacgcc 21364784

                                                                            
Query: 696      gctcccaccgtcgacctgaacagcgtgctcagcgagaccaggagccagtacgaggccctg 755
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 21364783 gctcccaccgtcgacctgaacagcgtgctcaacgagaccaggagccagtacgaggccctg 21364724

                                                             
Query: 756      gtggagaccaaccgcagggacgtggaggaatggttcgccaggcag 800
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21364723 gtggagaccaaccgcagggacgtggaggaatggttcgccaggcag 21364679



 Score =  319 bits (161), Expect = 3e-84
 Identities = 164/165 (99%)
 Strand = Plus / Minus

                                                                            
Query: 636      caggaagtcaactccctccggagccagctcggggaccgcctcaacatcgaggtggacgcc 695
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21378259 caggaagtcaactccctccggagccagctcggggaccgcctcaacatcgaggtggacgcc 21378200

                                                                            
Query: 696      gctcccaccgtcgacctgaacagcgtgctcagcgagaccaggagccagtacgaggccctg 755
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 21378199 gctcccaccgtcgacctgaacagcgtgctcagcgagaccaggagccagtacgaggccctc 21378140

                                                             
Query: 756      gtggagaccaaccgcagggacgtggaggaatggttcgccaggcag 800
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21378139 gtggagaccaaccgcagggacgtggaggaatggttcgccaggcag 21378095



 Score =  313 bits (158), Expect = 2e-82
 Identities = 158/158 (100%)
 Strand = Plus / Minus

                                                                            
Query: 482      gtaccagacggagctgggcttgcggcagctggtggagtcagacatcaacagcctgcgaag 541
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21379322 gtaccagacggagctgggcttgcggcagctggtggagtcagacatcaacagcctgcgaag 21379263

                                                                            
Query: 542      gaccctggacgagctgaccctgtgcaaggctgacctggaggcccaggtggagtccctgaa 601
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21379262 gaccctggacgagctgaccctgtgcaaggctgacctggaggcccaggtggagtccctgaa 21379203

                                                      
Query: 602      ggaggagctgctctgcctcaagcagaaccacgagcagg 639
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 21379202 ggaggagctgctctgcctcaagcagaaccacgagcagg 21379165



 Score =  311 bits (157), Expect = 6e-82
 Identities = 163/165 (98%)
 Strand = Plus / Minus

                                                                            
Query: 636      caggaagtcaactccctccggagccagctcggggaccgcctcaacatcgaggtggacgcc 695
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21406703 caggaagtcaactccctgcggagccagctcggggaccgcctcaacatcgaggtggacgcc 21406644

                                                                            
Query: 696      gctcccaccgtcgacctgaacagcgtgctcagcgagaccaggagccagtacgaggccctg 755
                |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21406643 gctcccactgtcgacctgaacagcgtgctcagcgagaccaggagccagtacgaggccctg 21406584

                                                             
Query: 756      gtggagaccaaccgcagggacgtggaggaatggttcgccaggcag 800
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21406583 gtggagaccaaccgcagggacgtggaggaatggttcgccaggcag 21406539



 Score =  303 bits (153), Expect = 2e-79
 Identities = 162/165 (98%)
 Strand = Plus / Minus

                                                                            
Query: 636      caggaagtcaactccctccggagccagctcggggaccgcctcaacatcgaggtggacgcc 695
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21393433 caggaagtcaactccctgcggagccagctcggggaccgcctcaacatcgaggtggacgcc 21393374

                                                                            
Query: 696      gctcccaccgtcgacctgaacagcgtgctcagcgagaccaggagccagtacgaggccctg 755
                ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| 
Sbjct: 21393373 gctcccaccgtcgacctgaacagcgtgctcaacgagaccaggagccagtacgaggccctc 21393314

                                                             
Query: 756      gtggagaccaaccgcagggacgtggaggaatggttcgccaggcag 800
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21393313 gtggagaccaaccgcagggacgtggaggaatggttcgccaggcag 21393269



 Score =  264 bits (133), Expect = 1e-67
 Identities = 148/153 (96%)
 Strand = Plus / Minus

                                                                            
Query: 487      agacggagctgggcttgcggcagctggtggagtcagacatcaacagcctgcgaaggaccc 546
                |||||||||||||||||||||||||||||||||||||| | ||| ||||||| |||| ||
Sbjct: 21366250 agacggagctgggcttgcggcagctggtggagtcagacctgaacggcctgcgcaggatcc 21366191

                                                                            
Query: 547      tggacgagctgaccctgtgcaaggctgacctggaggcccaggtggagtccctgaaggagg 606
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21366190 tggacgagctgaccctgtgcaaggctgacctggaggcccaggtggagtccctgaaggagg 21366131

                                                 
Query: 607      agctgctctgcctcaagcagaaccacgagcagg 639
                |||||||||||||||||||||||||||||||||
Sbjct: 21366130 agctgctctgcctcaagcagaaccacgagcagg 21366098



 Score =  256 bits (129), Expect = 3e-65
 Identities = 129/129 (100%)
 Strand = Plus / Minus

                                                                            
Query: 798      cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 857
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21364583 cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 21364524

                                                                            
Query: 858      gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 917
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21364523 gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 21364464

                         
Query: 918      cacaacctg 926
                |||||||||
Sbjct: 21364463 cacaacctg 21364455



 Score =  256 bits (129), Expect = 3e-65
 Identities = 129/129 (100%)
 Strand = Plus / Minus

                                                                            
Query: 798      cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 857
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21377999 cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 21377940

                                                                            
Query: 858      gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 917
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21377939 gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 21377880

                         
Query: 918      cacaacctg 926
                |||||||||
Sbjct: 21377879 cacaacctg 21377871



 Score =  256 bits (129), Expect = 3e-65
 Identities = 129/129 (100%)
 Strand = Plus / Minus

                                                                            
Query: 798      cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 857
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21393173 cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 21393114

                                                                            
Query: 858      gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 917
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21393113 gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 21393054

                         
Query: 918      cacaacctg 926
                |||||||||
Sbjct: 21393053 cacaacctg 21393045



 Score =  256 bits (129), Expect = 3e-65
 Identities = 129/129 (100%)
 Strand = Plus / Minus

                                                                            
Query: 798      cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 857
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21406443 cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 21406384

                                                                            
Query: 858      gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 917
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21406383 gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 21406324

                         
Query: 918      cacaacctg 926
                |||||||||
Sbjct: 21406323 cacaacctg 21406315



 Score =  232 bits (117), Expect = 5e-58
 Identities = 129/133 (96%)
 Strand = Plus / Minus

                                                                            
Query: 487      agacggagctgggcttgcggcagctggtggagtcagacatcaacagcctgcgaaggaccc 546
                |||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||
Sbjct: 21407874 agacggagctgggcttgcggcagctggtggagtcagacatcaatggcctgcgcaggatcc 21407815

                                                                            
Query: 547      tggacgagctgaccctgtgcaaggctgacctggaggcccaggtggagtccctgaaggagg 606
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21407814 tggacgagctgaccctgtgcaaggctgacctggaggcccaggtggagtccctgaaggagg 21407755

                             
Query: 607      agctgctctgcct 619
                |||||||||||||
Sbjct: 21407754 agctgctctgcct 21407742



 Score =  220 bits (111), Expect = 2e-54
 Identities = 120/123 (97%)
 Strand = Plus / Minus

                                                                            
Query: 185      ctggttctgcgagggcgccttcaatggcaacgagaaggagaccatgcagtttctgaacga 244
                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 21462922 ctggttctgcgagggcgccttcaatggcaacgagaaggagaccatgcagttcctgaacga 21462863

                                                                            
Query: 245      ccggctggccagctacctggagaaggtgcgccagctggagcgggacaacgcggagctgga 304
                ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 21462862 ccggctggccaactacctggagaaggtgcgccagctggagcgggacaatgcggagctgga 21462803

                   
Query: 305      gag 307
                |||
Sbjct: 21462802 gag 21462800



 Score =  216 bits (109), Expect = 3e-53
 Identities = 175/197 (88%)
 Strand = Plus / Minus

                                                                            
Query: 952      cggagacggaggcccgctacagctcgcagctggcccaggtgcagggcctgatcggcaacg 1011
                ||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||
Sbjct: 21459939 cggagacggaggcccgctacagctcacagctggcccagatgcagggcctgatcagcaacg 21459880

                                                                            
Query: 1012     tggaggctcagctggcggagatccgggctgacctggagcgtcagaaccaggagtaccagg 1071
                ||||||| |||||||| ||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 21459879 tggaggcccagctggccgagatccgctgtgacctggagcgtcagaaccaggagtaccagg 21459820

                                                                            
Query: 1072     tgctgctggacgtgcgggcccggctggagtgtgagatcaacacgtaccgggggctgctgg 1131
                |||||||||| ||   ||||||||||||||  ||||||  |||||||||  | |||||||
Sbjct: 21459819 tgctgctggatgtcaaggcccggctggagtcggagatcgccacgtaccgccgcctgctgg 21459760

                                 
Query: 1132     agagcgaggactgcaag 1148
                || | || |||||||||
Sbjct: 21459759 agggagaagactgcaag 21459743



 Score =  200 bits (101), Expect = 2e-48
 Identities = 122/129 (94%)
 Strand = Plus / Minus

                                                                            
Query: 503      gcggcagctggtggagtcagacatcaacagcctgcgaaggaccctggacgagctgaccct 562
                |||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||
Sbjct: 21395359 gcggcagctggtggagtcagacatcaacagcctgcgtaggatcttggacgagctgaccct 21395300

                                                                            
Query: 563      gtgcaaggctgacctggaggcccaggtggagtccctgaaggaggagctgctctgcctcaa 622
                 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 21395299 ctgcaaggctgacctggagacccaggtggagtccctgagggaggagctgctctgcctcaa 21395240

                         
Query: 623      gcagaacca 631
                | |||||||
Sbjct: 21395239 gaagaacca 21395231



 Score =  194 bits (98), Expect = 1e-46
 Identities = 122/130 (93%)
 Strand = Plus / Minus

                                                                            
Query: 502      tgcggcagctggtggagtcagacatcaacagcctgcgaaggaccctggacgagctgaccc 561
                |||| |||||||||||||||||||| ||| ||||||| |||| |||||| || |||||||
Sbjct: 21450309 tgcgccagctggtggagtcagacatgaacggcctgcgcaggatcctggatgatctgaccc 21450250

                                                                            
Query: 562      tgtgcaaggctgacctggaggcccaggtggagtccctgaaggaggagctgctctgcctca 621
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21450249 tgtgcaaggctgacctggaggcccaggtggagtccctgaaggaggagctgctctgcctca 21450190

                          
Query: 622      agcagaacca 631
                || |||||||
Sbjct: 21450189 agaagaacca 21450180



 Score =  174 bits (88), Expect = 1e-40
 Identities = 88/88 (100%)
 Strand = Plus / Minus

                                                                            
Query: 397      agatcctgagtggcaagtctgagaacgccaggctggtggtgcagattgacaatgccaagc 456
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21380648 agatcctgagtggcaagtctgagaacgccaggctggtggtgcagattgacaatgccaagc 21380589

                                            
Query: 457      tggctgccgatgacttcaggaccaagta 484
                ||||||||||||||||||||||||||||
Sbjct: 21380588 tggctgccgatgacttcaggaccaagta 21380561



 Score =  161 bits (81), Expect = 1e-36
 Identities = 162/189 (85%)
 Strand = Plus / Minus

                                                                            
Query: 210      ggcaacgagaaggagaccatgcagtttctgaacgaccggctggccagctacctggagaag 269
                ||||||||||||||||| |||||||  || || |||||||||||||||||||||||||||
Sbjct: 21452148 ggcaacgagaaggagacaatgcagtccctcaatgaccggctggccagctacctggagaag 21452089

                                                                            
Query: 270      gtgcgccagctggagcgggacaacgcggagctggagaggcagatccaggagcggtctcag 329
                ||||| | |||||||||||| ||| ||||||||||| | |  ||||  ||| ||| | ||
Sbjct: 21452088 gtgcggcggctggagcgggagaactcggagctggagggccgcatccgagagtggtgtgag 21452029

                                                                            
Query: 330      cagcaggagcccctggtgtgtcccaactaccagtcctacttccggaccatcgaggagctc 389
                ||||||||||||    |||| ||| |||||||||||||||||| |||||||||||| |||
Sbjct: 21452028 cagcaggagccctacctgtgccccgactaccagtcctacttccagaccatcgaggaactc 21451969

                         
Query: 390      cagcagaag 398
                ||| |||||
Sbjct: 21451968 cagaagaag 21451960



 Score =  155 bits (78), Expect = 9e-35
 Identities = 135/154 (87%)
 Strand = Plus / Minus

                                                                            
Query: 482      gtaccagacggagctgggcttgcggcagctggtggagtcagacatcaacagcctgcgaag 541
                |||| |||||||||||| | ||||||||||||||||| | || | |||| |||||||  |
Sbjct: 21439737 gtacgagacggagctggccatgcggcagctggtggaggctgataccaacggcctgcgccg 21439678

                                                                            
Query: 542      gaccctggacgagctgaccctgtgcaaggctgacctggaggcccaggtggagtccctgaa 601
                || ||||||||||||||| |||||||||||||||||||||   |||||||||||||||||
Sbjct: 21439677 gatcctggacgagctgacgctgtgcaaggctgacctggagatgcaggtggagtccctgaa 21439618

                                                  
Query: 602      ggaggagctgctctgcctcaagcagaaccacgag 635
                 ||||||||| | ||||||||| |||||||||||
Sbjct: 21439617 agaggagctgatgtgcctcaagaagaaccacgag 21439584



 Score =  155 bits (78), Expect = 9e-35
 Identities = 99/106 (93%)
 Strand = Plus / Minus

                                                                            
Query: 202      ccttcaatggcaacgagaaggagaccatgcagtttctgaacgaccggctggccagctacc 261
                |||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||
Sbjct: 21441308 ccttcaatggcaacgagaaggagaccctgcagttcctgaacgaccggctggccaaatacc 21441249

                                                              
Query: 262      tggagaaggtgcgccagctggagcgggacaacgcggagctggagag 307
                ||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 21441248 tggagaaggtgcggcagctggagcaggacaatgcggagctggagag 21441203



 Score =  155 bits (78), Expect = 9e-35
 Identities = 135/154 (87%)
 Strand = Plus / Minus

                                                                            
Query: 482      gtaccagacggagctgggcttgcggcagctggtggagtcagacatcaacagcctgcgaag 541
                |||| |||||||||||||| ||||||||||||||||| | || | |||| |||||||  |
Sbjct: 21461433 gtacgagacggagctgggcatgcggcagctggtggaggctgataccaacggcctgcgccg 21461374

                                                                            
Query: 542      gaccctggacgagctgaccctgtgcaaggctgacctggaggcccaggtggagtccctgaa 601
                || |||||| |||||||| |||||||||||||||||||||   |||||||||||||||||
Sbjct: 21461373 gatcctggatgagctgacgctgtgcaaggctgacctggagatgcaggtggagtccctgaa 21461314

                                                  
Query: 602      ggaggagctgctctgcctcaagcagaaccacgag 635
                |||||||||| | ||||||||| |||| ||||||
Sbjct: 21461313 ggaggagctgatatgcctcaagaagaatcacgag 21461280



 Score =  151 bits (76), Expect = 1e-33
 Identities = 112/124 (90%)
 Strand = Plus / Minus

                                                                            
Query: 798      cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 857
                ||||| |||||||||||| ||||||||||||||||||| ||||||||||||| || ||||
Sbjct: 21460258 cagacggaggagctgaaccagcaggtggtgtccagctccgagcagctgcagtgctgccag 21460199

                                                                            
Query: 858      gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 917
                 | |||||||||||||| |||||||  ||||||||||||||| | |||||||||||||||
Sbjct: 21460198 acagagatcatcgagctaagacgcaatgtcaacgccctggagatcgagctgcaggcccag 21460139

                    
Query: 918      caca 921
                ||||
Sbjct: 21460138 caca 21460135



 Score =  143 bits (72), Expect = 3e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                            
Query: 798      cagaccgaggagctgaacaagcaggtggtgtccagctcggagcagctgcagtcctaccag 857
                ||||| |||||||||||| ||||||||||  ||||||| |||||||||||||||| ||||
Sbjct: 21449569 cagacggaggagctgaaccagcaggtggtaaccagctcagagcagctgcagtcctgccag 21449510

                                                                            
Query: 858      gcggagatcatcgagctgagacgcacggtcaacgccctggaggtggagctgcaggcccag 917
                || || ||||| |||||||||||||  ||||||||||||||| | |||||||||||||||
Sbjct: 21449509 gcagatatcatggagctgagacgcaatgtcaacgccctggagatcgagctgcaggcccag 21449450

                    
Query: 918      caca 921
                ||||
Sbjct: 21449449 caca 21449446



 Score =  125 bits (63), Expect = 8e-26
 Identities = 72/75 (96%)
 Strand = Plus / Minus

                                                                            
Query: 409      gcaagtctgagaacgccaggctggtggtgcagattgacaatgccaagctggctgccgatg 468
                |||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 21408286 gcaagtctgagaacgccaggctggtggtgcagatcgacaatgccaaactggccgccgatg 21408227

                               
Query: 469      acttcaggaccaagt 483
                |||||||||||||||
Sbjct: 21408226 acttcaggaccaagt 21408212



 Score =  125 bits (63), Expect = 8e-26
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                            
Query: 214      acgagaaggagaccatgcagtttctgaacgaccggctggccagctacctggagaaggtgc 273
                ||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 21422215 acgagaagctgaccatgcagttcctgaatgaccggctggccagctacctggagaaggtgc 21422156

                                                               
Query: 274      gccagctggagcgggacaacgcggagctggagaggcagatccaggag 320
                | ||||||||| ||||| || |||| ||||||| |||||||| ||||
Sbjct: 21422155 ggcagctggagggggacgacacggacctggagaagcagatcctggag 21422109



 Score =  119 bits (60), Expect = 5e-24
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                            
Query: 397      agatcctgagtggcaagtctgagaacgccaggctggtggtgcagattgacaatgccaagc 456
                |||| ||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||
Sbjct: 21396051 agattctgagtgccaagtctgagaacaccaggctggtggtgcaggtcgacaatgccaagc 21395992

                                            
Query: 457      tggctgccgatgacttcaggaccaagta 484
                |||| |||||||||||||| ||||||||
Sbjct: 21395991 tggccgccgatgacttcagaaccaagta 21395964



 Score =  109 bits (55), Expect = 5e-21
 Identities = 70/75 (93%)
 Strand = Plus / Minus

                                                                            
Query: 409      gcaagtctgagaacgccaggctggtggtgcagattgacaatgccaagctggctgccgatg 468
                ||||||||||||| |||||||||||||||||||| ||||| |||||||||||| | ||||
Sbjct: 21366842 gcaagtctgagaatgccaggctggtggtgcagatcgacaacgccaagctggcttctgatg 21366783

                               
Query: 469      acttcaggaccaagt 483
                |||||||||||||||
Sbjct: 21366782 acttcaggaccaagt 21366768



 Score =  103 bits (52), Expect = 3e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                            
Query: 417      gagaacgccaggctggtggtgcagattgacaatgccaagctggctgccgatgacttcagg 476
                ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 21450597 gagaatgccaggctggtggtgcagattgacaatgccaagctggccgcagatgacttcagg 21450538

                        
Query: 477      accaagta 484
                | ||||||
Sbjct: 21450537 agcaagta 21450530



 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                            
Query: 1006     gcaacgtggaggctcagctggcggagatccgggctgacctggagcgtcagaaccaggagt 1065
                ||||||||||||  |||||| | ||||||| ||| ||||||||||  ||||||||| |||
Sbjct: 21419097 gcaacgtggaggagcagctgtctgagatcccggcggacctggagcagcagaaccagtagt 21419038

                                                   
Query: 1066     accaggtgctgctggacgtgcgggcccggctggag 1100
                |||||||||||||||| || | |||| ||||||||
Sbjct: 21419037 accaggtgctgctggatgtccaggcctggctggag 21419003



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                            
Query: 660      cagctcggggaccgcctcaacatcgaggtggacgccgctcccaccgtcgacctgaacagc 719
                ||||| ||||||||||| ||||||||||| |||||||| ||| |||| ||||||||||| 
Sbjct: 21438264 cagcttggggaccgcctgaacatcgaggtagacgccgcgccccccgtggacctgaacagg 21438205

                                                                            
Query: 720      gtgctcagcgagaccaggagccagtacgaggccctggtggagaccaaccgcagggacgtg 779
                |||||    ||||   |  | || || ||||| ||||||||| ||||||||||||| |||
Sbjct: 21438204 gtgctggaagagatgcgttgtcaatatgaggctctggtggagtccaaccgcagggatgtg 21438145

                                     
Query: 780      gaggaatggttcgccaggcag 800
                ||||| |||||| ||| ||||
Sbjct: 21438144 gaggagtggttcaccatgcag 21438124



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1014     gaggctcagctggcggagatccgggctgacctggagcgtcagaaccaggagtaccaggtg 1073
                |||||||||||||| ||||||||||  | ||||||  | |||||||| || ||| || | 
Sbjct: 21988936 gaggctcagctggcagagatccggggggccctggaaagacagaaccaagaatacgagatt 21988877

                                                               
Query: 1074     ctgctggacgtgcgggcccggctggagtgtgagatcaacacgtaccg 1120
                ||||||||| | ||| ||||||||||||||||||| | |||||||||
Sbjct: 21988876 ctgctggacatccggtcccggctggagtgtgagattaccacgtaccg 21988830



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1014     gaggctcagctggcggagatccgggctgacctggagcgtcagaaccaggagtaccaggtg 1073
                |||||||||||||| ||||||||||  | ||||||  | |||||||| || ||| || | 
Sbjct: 21692519 gaggctcagctggcagagatccggggggccctggaaagacagaaccaagaatacgagatt 21692460

                                                               
Query: 1074     ctgctggacgtgcgggcccggctggagtgtgagatcaacacgtaccg 1120
                ||||||||| | ||| |||| |||||||||||||| | |||||||||
Sbjct: 21692459 ctgctggacatccggtcccgtctggagtgtgagattaccacgtaccg 21692413



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1040     tgacctggagcgtcagaaccaggagtaccaggtgctgctggacgtg 1085
                |||| ||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 21322445 tgacatggagcgccagaaccacgagtaccaggtgctgctggacgtg 21322490



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                          
Query: 566      caaggctgacctggaggcccaggtggagtccctgaaggaggagctgctctgcctcaag 623
                ||||||||||||||| ||||||  |||| ||||||||||| ||| |||||||||||||
Sbjct: 21420716 caaggctgacctggaagcccagcaggagcccctgaaggagaagcagctctgcctcaag 21420659



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                            
Query: 410      caagtctgagaacgccaggctggtggtgcagattgacaatgccaagctggctgccgatga 469
                |||| |||| ||||||||||||||  ||||||||||||| || || |||||||| |||||
Sbjct: 21461771 caaggctgataacgccaggctggtcctgcagattgacaacgctaaactggctgctgatga 21461712

                              
Query: 470      cttcaggaccaagt 483
                |||| | |||||||
Sbjct: 21461711 cttccgcaccaagt 21461698



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                            
Query: 513      gtggagtcagacatcaacagcctgcgaaggaccctggacgagctgaccctgtgcaaggct 572
                |||||| | ||||||||| | ||||| |||   ||||||||||||||||||  ||  || 
Sbjct: 21883738 gtggaggccgacatcaacgggctgcgcagggtgctggacgagctgaccctggtcagagcc 21883679

                                                                            
Query: 573      gacctggaggcccaggtggagtccctgaaggaggagctgctctgcctcaagcagaaccac 632
                ||||||||| ||||| | ||| ||||||| |||||||||  || ||| ||| ||||||||
Sbjct: 21883678 gacctggagacccagatcgagaccctgaacgaggagctggcctacctgaagaagaaccac 21883619

                   
Query: 633      gag 635
                |||
Sbjct: 21883618 gag 21883616


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,507,759
Number of extensions: 328
Number of successful extensions: 328
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 325
Number of HSP's successfully gapped: 47
Length of query: 1581
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1559
Effective length of database: 2,808,408,574
Effective search space: 4378308966866
Effective search space used: 4378308966866
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)