Animal-Genome cDNA 20110601C-012161

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012161
         (1774 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001076854.1| keratin, type II cuticular Hb3 [Bos taurus].      737   0.0  
Alignment   gi|NP_001069674.1| keratin, type II cuticular Hb1 [Bos taurus].      718   0.0  
Alignment   gi|NP_001179997.1| keratin, type II cuticular Hb6 [Bos taurus].      679   0.0  
Alignment   gi|XP_002687299.1| PREDICTED: keratin 86 [Bos taurus].               679   0.0  
Alignment   gi|NP_001069381.1| keratin, type II cuticular Hb5 [Bos taurus].      586   e-167
Alignment   gi|XP_608645.2| PREDICTED: intermediate filament type II kerati...   558   e-159
Alignment   gi|XP_001254951.1| PREDICTED: intermediate filament type II ker...   558   e-159
Alignment   gi|XP_002687301.1| PREDICTED: intermediate filament type II ker...   549   e-156
Alignment   gi|NP_001094581.1| keratin 85 [Bos taurus].                          528   e-150
Alignment   gi|NP_001179264.1| keratin, type II cuticular Hb4 [Bos taurus].      441   e-123

>ref|NP_001076854.1| keratin, type II cuticular Hb3 [Bos taurus].
          Length = 493

 Score =  737 bits (1903), Expect = 0.0
 Identities = 376/474 (79%), Positives = 390/474 (82%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRPGRCCI+AAPYRGISCYRGLT                               
Sbjct: 19   CVSACGPRPGRCCITAAPYRGISCYRGLTGGFGSRSVCGGFRAGYCSRSFGYRSGGVGGL 78

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL
Sbjct: 79   SPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 138

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNRQCCESNLEPLF GYIETLRREAE VEADSGRL+SELNHVQEVLEGYKKK
Sbjct: 139  LETKLQFYQNRQCCESNLEPLFEGYIETLRREAECVEADSGRLSSELNHVQEVLEGYKKK 198

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAYIRKSDLEAN EAL+QEIDFLRRLYEEEIRVLQA+
Sbjct: 199  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANSEALIQEIDFLRRLYEEEIRVLQAN 258

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSR LNM+NIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATV+RHGE
Sbjct: 259  ISDTSVIVKMDNSRGLNMDNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVIRHGE 318

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNR+IQRLTAE+ENAKCQNSKL              LND          
Sbjct: 319  TLRRTKEEINELNRLIQRLTAEVENAKCQNSKLEAAVTQAEQQGEVALNDARCKLAGLEE 378

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEG+GA          
Sbjct: 379  ALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVGAVNVCVSSSRG 438

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSCGLGR 1542
                 DLCVSGSRPVTGSVCSAPCSGN+AVSTGLCAPCGQLNTTCGGGSC LGR
Sbjct: 439  GVVCGDLCVSGSRPVTGSVCSAPCSGNLAVSTGLCAPCGQLNTTCGGGSCSLGR 492


>ref|NP_001069674.1| keratin, type II cuticular Hb1 [Bos taurus].
          Length = 500

 Score =  718 bits (1854), Expect = 0.0
 Identities = 370/478 (77%), Positives = 389/478 (81%), Gaps = 5/478 (1%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRPGRCCI+AAPYRGISCYRGLT                               
Sbjct: 14   CVSACGPRPGRCCITAAPYRGISCYRGLTGGFGSRSICGGFRAGSFGRSFGYRSGGVGGL 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            +PPCITTVS+NE LLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL
Sbjct: 74   NPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNRQCCESNLEPLFNGYIETLRREAE VEADSGRL+SELN +QEVLEGYKKK
Sbjct: 134  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAECVEADSGRLSSELNSLQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEANVEAL+QEIDFLRRLYEEEIRVLQAH
Sbjct: 194  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANVEALIQEIDFLRRLYEEEIRVLQAH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+NIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATV+RHGE
Sbjct: 254  ISDTSVIVKMDNSRDLNMDNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNR+IQRLTAE+ENAKCQNSKL              LND          
Sbjct: 314  TLRRTKEEINELNRVIQRLTAEVENAKCQNSKLEAAVTQAEQQGEAALNDAKCKLAGLEE 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEG+G+          
Sbjct: 374  ALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVGSVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLN--TTCGGG---SCGLG 1539
                 DLCVSGSRPVTGSVCSAPCSGN+AVSTGLCAPCG  N  T+CG G   SCG+G
Sbjct: 434  GVVCGDLCVSGSRPVTGSVCSAPCSGNLAVSTGLCAPCGPCNSVTSCGLGGISSCGVG 491


>ref|NP_001179997.1| keratin, type II cuticular Hb6 [Bos taurus].
          Length = 486

 Score =  679 bits (1752), Expect = 0.0
 Identities = 351/463 (75%), Positives = 369/463 (79%), Gaps = 2/463 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRPGRCCI+AAPYRGISCYRGLT                               
Sbjct: 14   CVSACGPRPGRCCITAAPYRGISCYRGLTGGFGSRSVCGGFRAGYCGRSFGYRSGGVGGL 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNRQCCESNLEPLFNGYIETLRREAE VEADSGRL+SELN +QEVLEGYKKK
Sbjct: 134  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAECVEADSGRLSSELNSLQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKKDVDCAY+RKSDLEANVEAL+QEIDFLRRLYEEEIRVLQAH
Sbjct: 194  YEEEVSLRATAENEFVALKKDVDCAYLRKSDLEANVEALIQEIDFLRRLYEEEIRVLQAH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+NIVAEIKA YDDIASRSRAEAESWYRSKCEEIKATV+RHGE
Sbjct: 254  ISDTSVIVKMDNSRDLNMDNIVAEIKAHYDDIASRSRAEAESWYRSKCEEIKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNR IQRLTAE+ENAKCQNSKL              LND          
Sbjct: 314  TLRRTKEEINELNRTIQRLTAEVENAKCQNSKLEAAVTQAEQQGEAALNDAKCKLAGLEE 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEG+G+          
Sbjct: 374  ALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVGSVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRP-VTGSVCSAPCSGNVAVSTG-LCAPCGQL 1503
                 DLC SG+ P VT SVCSAPCSGNV V T   C PC ++
Sbjct: 434  GVVCGDLCASGAAPAVTTSVCSAPCSGNVVVGTSDACGPCSRV 476


>ref|XP_002687299.1| PREDICTED: keratin 86 [Bos taurus].
          Length = 486

 Score =  679 bits (1752), Expect = 0.0
 Identities = 351/463 (75%), Positives = 369/463 (79%), Gaps = 2/463 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRPGRCCI+AAPYRGISCYRGLT                               
Sbjct: 14   CVSACGPRPGRCCITAAPYRGISCYRGLTGGFGSRSVCGGFRAGYCGRSFGYRSGGVGGL 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNRQCCESNLEPLFNGYIETLRREAE VEADSGRL+SELN +QEVLEGYKKK
Sbjct: 134  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAECVEADSGRLSSELNSLQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKKDVDCAY+RKSDLEANVEAL+QEIDFLRRLYEEEIRVLQAH
Sbjct: 194  YEEEVSLRATAENEFVALKKDVDCAYLRKSDLEANVEALIQEIDFLRRLYEEEIRVLQAH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+NIVAEIKA YDDIASRSRAEAESWYRSKCEEIKATV+RHGE
Sbjct: 254  ISDTSVIVKMDNSRDLNMDNIVAEIKAHYDDIASRSRAEAESWYRSKCEEIKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNR IQRLTAE+ENAKCQNSKL              LND          
Sbjct: 314  TLRRTKEEINELNRTIQRLTAEVENAKCQNSKLEAAVTQAEQQGEAALNDAKCKLAGLEE 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEG+G+          
Sbjct: 374  ALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVGSVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRP-VTGSVCSAPCSGNVAVSTG-LCAPCGQL 1503
                 DLC SG+ P VT SVCSAPCSGNV V T   C PC ++
Sbjct: 434  GVVCGDLCASGAAPAVTTSVCSAPCSGNVVVGTSDACGPCSRV 476


>ref|NP_001069381.1| keratin, type II cuticular Hb5 [Bos taurus].
          Length = 507

 Score =  586 bits (1511), Expect = e-167
 Identities = 320/487 (65%), Positives = 352/487 (72%), Gaps = 15/487 (3%)
 Frame = +1

Query: 127  SACGPRPG-RCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-- 297
            SA  P+ G RCCI+AAPYRG+SCYRGLT                                
Sbjct: 22   SAVAPKTGSRCCITAAPYRGVSCYRGLTGFGSRSVSALGSCGPRIAVGGFRAGSCNRSFG 81

Query: 298  --------PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKV 453
                     SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIK LN+RFAAFIDKV
Sbjct: 82   YRSGGVGGLSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKNLNSRFAAFIDKV 141

Query: 454  RFLEQQNKLLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQ 633
            RFLEQQNKLLETK QFYQN++CCESNLEPLFNGYIETLRREAE VEAD GRLASELNHVQ
Sbjct: 142  RFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAEHVEADGGRLASELNHVQ 201

Query: 634  EVLEGYKKKYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYE 813
            EVLEGYKKKYEEEVALRATAENEFV LKKDVDCAY+RKSDLEANVEALV+E +FL+RLY+
Sbjct: 202  EVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESNFLKRLYD 261

Query: 814  EEIRVLQAHISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEI 993
            EEI++L AHISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+
Sbjct: 262  EEIQILNAHISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRNKCEEM 321

Query: 994  KATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDX 1173
            KATV+RHGETLRRTKEEINELNR+IQRLTAEIENAKCQ +KL              LND 
Sbjct: 322  KATVIRHGETLRRTKEEINELNRIIQRLTAEIENAKCQRTKLEAAVAEAEQQGEAALNDA 381

Query: 1174 XXXXXXXXXXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAX 1353
                            DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEG+G+ 
Sbjct: 382  RCKLAGLEEALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVGSV 441

Query: 1354 XXXXXXXXXXXXXXDLCVS---GSRPVTGSVCSAPCSGNVAV-STGLCAPCGQLNTTCGG 1521
                           L  S   G +  +G V +    G++ V +   C PC         
Sbjct: 442  NVCVSSSRGGVTCGGLTYSTTAGRQIASGPVAT---GGSITVLAPDSCVPC---QPRASS 495

Query: 1522 GSCGLGR 1542
             SCG  R
Sbjct: 496  FSCGSSR 502


>ref|XP_608645.2| PREDICTED: intermediate filament type II keratin-like [Bos taurus].
          Length = 480

 Score =  558 bits (1437), Expect = e-159
 Identities = 302/475 (63%), Positives = 344/475 (72%), Gaps = 2/475 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRP RCCI+AAPYRG+SCYRGLT                              P
Sbjct: 34   CVSACGPRPSRCCITAAPYRGVSCYRGLT---GGFSSRSVCGGSRAGSSSRSFGYRSGGP 90

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCIT+VS+N+ LL PLNLEIDPNAQ +K +EKEQIK LN++FAAFIDKV FLEQQNKL
Sbjct: 91   SPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKL 150

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK +FYQN++CCESNLEPLFNGYIETLRREAE VEAD+GRLASELN +QEVL+GYKKK
Sbjct: 151  LETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKK 210

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVAL+ TAENEFV +K++V+ AY+ K DLEAN  +LV+E+ FL+ LYEEE+RV+QAH
Sbjct: 211  YEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAH 270

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSV+VK+DNSR LNM++IVAEIKA YD+IASRSRAEAESWYRSK EEIKATV+RHGE
Sbjct: 271  ISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGE 330

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNR+IQRLTAEIENAK QNSKL              LND          
Sbjct: 331  TLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEK 390

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+++KLGLDIEIATYRRLLEGEEQRLCEGI A          
Sbjct: 391  TLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISA---------- 440

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNT--TCGGGSCGLG 1539
                 ++ VS SR            G V         CG L+   TCG GS G+G
Sbjct: 441  ----VNVRVSSSR------------GGVV--------CGDLSATRTCGIGSYGVG 471


>ref|XP_001254951.1| PREDICTED: intermediate filament type II keratin-like [Bos taurus].
          Length = 480

 Score =  558 bits (1437), Expect = e-159
 Identities = 302/475 (63%), Positives = 344/475 (72%), Gaps = 2/475 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRP RCCI+AAPYRG+SCYRGLT                              P
Sbjct: 34   CVSACGPRPSRCCITAAPYRGVSCYRGLT---GGFSSRSVCGGSRAGSSSRSFGYRSGGP 90

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCIT+VS+N+ LL PLNLEIDPNAQ +K +EKEQIK LN++FAAFIDKV FLEQQNKL
Sbjct: 91   SPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKL 150

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK +FYQN++CCESNLEPLFNGYIETLRREAE VEAD+GRLASELN +QEVL+GYKKK
Sbjct: 151  LETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKK 210

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVAL+ TAENEFV +K++V+ AY+ K DLEAN  +LV+E+ FL+ LYEEE+RV+QAH
Sbjct: 211  YEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAH 270

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSV+VK+DNSR LNM++IVAEIKA YD+IASRSRAEAESWYRSK EEIKATV+RHGE
Sbjct: 271  ISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGE 330

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNR+IQRLTAEIENAK QNSKL              LND          
Sbjct: 331  TLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEK 390

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+++KLGLDIEIATYRRLLEGEEQRLCEGI A          
Sbjct: 391  TLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISA---------- 440

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNT--TCGGGSCGLG 1539
                 ++ VS SR            G V         CG L+   TCG GS G+G
Sbjct: 441  ----VNVRVSSSR------------GGVV--------CGDLSATRTCGIGSYGVG 471


>ref|XP_002687301.1| PREDICTED: intermediate filament type II keratin-like [Bos taurus].
          Length = 482

 Score =  549 bits (1415), Expect = e-156
 Identities = 301/477 (63%), Positives = 343/477 (71%), Gaps = 4/477 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRP RCCI+AAPYRG+SCYRGLT                              P
Sbjct: 34   CVSACGPRPSRCCITAAPYRGVSCYRGLT---GGFSSRSVCGGSRAGSSSRSFGYRSGGP 90

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCIT+VS+N+ LL PLNLEIDPNAQ +K +EKEQIK LN++FAAFIDKV FLEQQNKL
Sbjct: 91   SPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKL 150

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK +FYQN++CCESNLEPLFNGYIETLRREAE VEAD+GRLASELN +QEVL+GYKKK
Sbjct: 151  LETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKK 210

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDF--LRRLYEEEIRVLQ 834
            YEEEVAL+ TAENEFV +K++V+ AY+ K DLEAN  +LV+E+    L+ LYEEE+RV+Q
Sbjct: 211  YEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVCVLGLKTLYEEELRVMQ 270

Query: 835  AHISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRH 1014
            AHISDTSV+VK+DNSR LNM++IVAEIKA YD+IASRSRAEAESWYRSK EEIKATV+RH
Sbjct: 271  AHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRH 330

Query: 1015 GETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXX 1194
            GETLRRTKEEINELNR+IQRLTAEIENAK QNSKL              LND        
Sbjct: 331  GETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGL 390

Query: 1195 XXXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXX 1374
                     DMACL+KEYQEV+++KLGLDIEIATYRRLLEGEEQRLCEGI A        
Sbjct: 391  EKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISA-------- 442

Query: 1375 XXXXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNT--TCGGGSCGLG 1539
                   ++ VS SR            G V         CG L+   TCG GS G+G
Sbjct: 443  ------VNVRVSSSR------------GGVV--------CGDLSATRTCGIGSYGVG 473


>ref|NP_001094581.1| keratin 85 [Bos taurus].
          Length = 493

 Score =  528 bits (1360), Expect = e-150
 Identities = 275/399 (68%), Positives = 311/399 (77%), Gaps = 2/399 (0%)
 Frame = +1

Query: 298  PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNK 477
            P PPCITTVS+NE LL PLNLEIDP AQCVK EEKEQIK LNN+FAAFIDKVRFLEQQNK
Sbjct: 90   PIPPCITTVSVNESLLAPLNLEIDPKAQCVKHEEKEQIKGLNNKFAAFIDKVRFLEQQNK 149

Query: 478  LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            LLETKLQFYQN QCCESNLEPLFNGYIETLRREAE VEA+SGRLASELNHV+EVLEGYKK
Sbjct: 150  LLETKLQFYQNHQCCESNLEPLFNGYIETLRREAECVEANSGRLASELNHVEEVLEGYKK 209

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYEEEVAL+ TAENEFV LKKD+DCAY+RK+DLEANVEAL +E+ FL+ LY+EEI +LQ+
Sbjct: 210  KYEEEVALKTTAENEFVVLKKDIDCAYLRKADLEANVEALKEEMSFLQSLYDEEIYLLQS 269

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
             ISDTSV+VK+DNSR+LNM+++VAEIKAQYD IASRSRAE ESWY++KCEE+K TV + G
Sbjct: 270  QISDTSVVVKMDNSRELNMDSVVAEIKAQYDGIASRSRAEVESWYQTKCEEMKVTVTQQG 329

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            E LRRTKEEINELNRMIQRLTAE+ENAK Q  KL              LND         
Sbjct: 330  ENLRRTKEEINELNRMIQRLTAEVENAKQQRCKLETALAEAEQQGEAALNDAKCKLAGLE 389

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXX 1377
                    DMACL+KEYQEV+NSKLGLD+EIATYR+LLEGEE RLCEG+G+         
Sbjct: 390  EALQKAKQDMACLLKEYQEVMNSKLGLDVEIATYRKLLEGEESRLCEGVGSINICVSRSQ 449

Query: 1378 XXXXXXDLCVSGSRPVTGSV--CSAPCSGNVAVSTGLCA 1488
                  DL  +  R + G+    SA CS +V    G C+
Sbjct: 450  GGVICGDLDSTVPRGLGGTAISSSALCSPSVG---GFCS 485


>ref|NP_001179264.1| keratin, type II cuticular Hb4 [Bos taurus].
          Length = 593

 Score =  441 bits (1133), Expect = e-123
 Identities = 241/443 (54%), Positives = 303/443 (68%), Gaps = 19/443 (4%)
 Frame = +1

Query: 298  PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNK 477
            P+ P IT V++N+ LLTPLNLEIDPNAQ VK++EKEQIK LNN+FA+FIDKVRFLEQQNK
Sbjct: 124  PAAPSITAVTVNQSLLTPLNLEIDPNAQRVKRDEKEQIKTLNNKFASFIDKVRFLEQQNK 183

Query: 478  LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            LLETK  F Q ++C +SNLEPLF  YI  LRR+ ++V +D  RL +E NH+Q+VLEG+KK
Sbjct: 184  LLETKWNFLQEQKCAKSNLEPLFENYITNLRRQLDVVNSDQARLEAERNHMQDVLEGFKK 243

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYEEEV LRA+AENEFVALKKDVD A++ K+DLEANV+ L+QEIDFL+ LYE EI++LQ+
Sbjct: 244  KYEEEVGLRASAENEFVALKKDVDTAFLSKADLEANVDTLIQEIDFLKTLYEAEIQLLQS 303

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            HIS+TSVIVK+DNSRDLN++ I+A+IKAQY++IA RSRA+AE+WY++K EE++ T  +H 
Sbjct: 304  HISETSVIVKMDNSRDLNVDGIIADIKAQYEEIARRSRADAEAWYQTKYEEMRVTAGQHC 363

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR T++E+NELNR+IQRL AEIE+AK Q  KL              LND         
Sbjct: 364  DNLRNTRDEMNELNRLIQRLKAEIEHAKAQRCKLEAAVAEAEQQGEAALNDAKCKLAELE 423

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXX 1377
                    DMA  +KEYQE++N KL LDIEIATYRRLLEGEE R+CEG+G          
Sbjct: 424  GALQQAKQDMARQLKEYQELMNVKLALDIEIATYRRLLEGEEIRICEGVG---------- 473

Query: 1378 XXXXXXDLCVSGSRPVTGSVC--------SAPCSGNVAV----------STGLC-APCGQ 1500
                  D+ VS SR   G VC        S+ C G V +          S+G C +  G 
Sbjct: 474  ----PVDIAVSSSR--GGLVCGPESLYSSSSLCRGGVIISGSGSSSNIRSSGFCSSSVGG 527

Query: 1501 LNTTCGGGSCGLGRY*AAPIPGE 1569
                 GG   G G    + + GE
Sbjct: 528  ARVVGGGDLLGAGSRGGSVLVGE 550


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 56,385,242
Number of extensions: 1563016
Number of successful extensions: 9807
Number of sequences better than 1.0e-05: 108
Number of HSP's gapped: 9419
Number of HSP's successfully gapped: 112
Length of query: 591
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 483
Effective length of database: 14,107,870
Effective search space: 6814101210
Effective search space used: 6814101210
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012161
         (1774 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_850166.1| PREDICTED: similar to keratin, hair, basic, 3 [...   711   0.0  
Alignment   gi|XP_543657.2| PREDICTED: similar to type II keratin Kb21 isof...   697   0.0  
Alignment   gi|XP_543656.2| PREDICTED: similar to type II keratin Kb26 [Can...   672   0.0  
Alignment   gi|XP_860589.1| PREDICTED: similar to type II keratin Kb21 isof...   624   e-179
Alignment   gi|XP_543653.2| PREDICTED: similar to keratin, hair, basic, 5 [...   597   e-171
Alignment   gi|XP_543654.2| PREDICTED: similar to keratin, hair, basic, 5 [...   530   e-150
Alignment   gi|XP_860523.1| PREDICTED: similar to Keratin, type II cuticula...   423   e-118
Alignment   gi|XP_543652.1| PREDICTED: similar to Keratin, type II cuticula...   423   e-118
Alignment   gi|XP_543651.2| PREDICTED: similar to keratin complex 2, basic,...   415   e-116
Alignment   gi|XP_543650.2| PREDICTED: similar to cytokeratin type II [Cani...   358   9e-99

>ref|XP_850166.1| PREDICTED: similar to keratin, hair, basic, 3 [Canis familiaris].
          Length = 578

 Score =  711 bits (1836), Expect = 0.0
 Identities = 364/491 (74%), Positives = 383/491 (78%)
 Frame = +1

Query: 49   HLPVXXXXXXXXXXXXXXXXXXXXCASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXX 228
            HLPV                    CASACGPRPGRCCI+AAPYRGISCYRGLT       
Sbjct: 86   HLPVSSMTCGFSNVGCGFGPRTLSCASACGPRPGRCCITAAPYRGISCYRGLTGGFGSRS 145

Query: 229  XXXXXXXXXXXXXXXXXXXXXXXPSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQ 408
                                   PSPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQ
Sbjct: 146  VCGAFRAGSCGRSFGYRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQ 205

Query: 409  IKCLNNRFAAFIDKVRFLEQQNKLLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELV 588
            IKCLN+RFAAFIDKVRFLEQQNKLLETK QFYQNR+CCESNLEPLF GYIETLRREAE V
Sbjct: 206  IKCLNSRFAAFIDKVRFLEQQNKLLETKWQFYQNRKCCESNLEPLFEGYIETLRREAECV 265

Query: 589  EADSGRLASELNHVQEVLEGYKKKYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANV 768
            EADSGRLASELNHVQEV+EGYKKKYEEEVALRATAENEFVALKK+VDCAY+RKSDLEAN 
Sbjct: 266  EADSGRLASELNHVQEVMEGYKKKYEEEVALRATAENEFVALKKEVDCAYLRKSDLEANA 325

Query: 769  EALVQEIDFLRRLYEEEIRVLQAHISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRS 948
            EAL +EIDFLRRLYEEEIRVL AHISDTSVIVK+DNSRDLNM+ IVAEIKAQYDDIASRS
Sbjct: 326  EALTEEIDFLRRLYEEEIRVLHAHISDTSVIVKMDNSRDLNMDCIVAEIKAQYDDIASRS 385

Query: 949  RAEAESWYRSKCEEIKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXX 1128
            RAEAESWYRSKCEE+KATV+RHGETLRRTKEEINELNRMIQRLTAE+ENAKCQN+KL   
Sbjct: 386  RAEAESWYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNTKLEAA 445

Query: 1129 XXXXXXXXXXXLNDXXXXXXXXXXXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRL 1308
                       L D                 DMACL+KEYQEV+NSKLGLDIEIATYRRL
Sbjct: 446  VTQAEQQGEAALTDARCKLAELEAALQKAKQDMACLVKEYQEVMNSKLGLDIEIATYRRL 505

Query: 1309 LEGEEQRLCEGIGAXXXXXXXXXXXXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCA 1488
            LEGEE RLCEG+GA               DLCVSGSRPVTGSVCSAPC+GNVAVSTG+CA
Sbjct: 506  LEGEEHRLCEGVGAVNVCVSSSRGGVVCGDLCVSGSRPVTGSVCSAPCTGNVAVSTGMCA 565

Query: 1489 PCGQLNTTCGG 1521
            PCG LNTTCGG
Sbjct: 566  PCGPLNTTCGG 576


>ref|XP_543657.2| PREDICTED: similar to type II keratin Kb21 isoform 1 [Canis
            familiaris].
          Length = 513

 Score =  697 bits (1800), Expect = 0.0
 Identities = 358/481 (74%), Positives = 380/481 (79%), Gaps = 8/481 (1%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCI+AAPYRG+SCYRGLT                              P
Sbjct: 14   CASACGPRPGRCCITAAPYRGVSCYRGLTGGFGSRSVCGAFRAGSCGRSFGYRSGGVCGP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESNLEPLF GYIETLRREAE VEADSGRLASELNHVQEVLEGYKKK
Sbjct: 134  LETKWQFYQNRKCCESNLEPLFEGYIETLRREAECVEADSGRLASELNHVQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKKDVDCAY+RKSDLEAN EAL +EIDFLRRLYEEEIRVL AH
Sbjct: 194  YEEEVSLRATAENEFVALKKDVDCAYLRKSDLEANAEALTEEIDFLRRLYEEEIRVLHAH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ IVAEIKAQYDDIASRSRAEAESWYRSKCEE+KATV+RHGE
Sbjct: 254  ISDTSVIVKMDNSRDLNMDCIVAEIKAQYDDIASRSRAEAESWYRSKCEEMKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNRMIQRLTAE+ENAKCQN+KL              L D          
Sbjct: 314  TLRRTKEEINELNRMIQRLTAEVENAKCQNTKLEAAVTQAEQQGEAALTDARCKLAELEA 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEE RLCEG+GA          
Sbjct: 374  ALQKAKQDMACLVKEYQEVMNSKLGLDIEIATYRRLLEGEEHRLCEGVGAVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLN--------TTCGGGSCGL 1536
                 DLCVSGSRPVTGSVCSAPCSGN+AVSTG+CAPC            T+CG G+ G+
Sbjct: 434  GVVCGDLCVSGSRPVTGSVCSAPCSGNLAVSTGMCAPCAPCAPCAPCNSITSCGLGTGGV 493

Query: 1537 G 1539
            G
Sbjct: 494  G 494


>ref|XP_543656.2| PREDICTED: similar to type II keratin Kb26 [Canis familiaris].
          Length = 485

 Score =  672 bits (1733), Expect = 0.0
 Identities = 343/459 (74%), Positives = 362/459 (78%), Gaps = 1/459 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCI+AAPYRG+SCYRGLT                              P
Sbjct: 14   CASACGPRPGRCCITAAPYRGVSCYRGLTGGFGSRSVCGAFRAGSCGRSFGYRSGGVCGP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESNLEPLF GYIETLRREAE VEADSGRLASELNHVQEVLEGYKKK
Sbjct: 134  LETKWQFYQNRKCCESNLEPLFEGYIETLRREAECVEADSGRLASELNHVQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKKDVDCAY+RKSDLEAN EAL +EIDFLRRLYEEEIRVL AH
Sbjct: 194  YEEEVSLRATAENEFVALKKDVDCAYLRKSDLEANAEALTEEIDFLRRLYEEEIRVLHAH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ IVAEIKAQYDDI SRSRAEAESWYRSKCEE+KATV+RHGE
Sbjct: 254  ISDTSVIVKMDNSRDLNMDCIVAEIKAQYDDIVSRSRAEAESWYRSKCEEMKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNRMIQRLTAE+ENAKCQN+KL              L D          
Sbjct: 314  TLRRTKEEINELNRMIQRLTAEVENAKCQNTKLEAAVTQAEQQGEAALTDARCKLAELEA 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEG+GA          
Sbjct: 374  ALQKAKQDMACLVKEYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVGAVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRP-VTGSVCSAPCSGNVAVSTGLCAPC 1494
                 DLC SG+ P VT  VCSAPCSGN+ V T  C PC
Sbjct: 434  GVVCGDLCASGAAPAVTSRVCSAPCSGNLVVGTSACTPC 472


>ref|XP_860589.1| PREDICTED: similar to type II keratin Kb21 isoform 3 [Canis
            familiaris].
          Length = 481

 Score =  624 bits (1609), Expect = e-179
 Identities = 330/481 (68%), Positives = 350/481 (72%), Gaps = 8/481 (1%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCI+AAPYRG+SCYRGLT                              P
Sbjct: 14   CASACGPRPGRCCITAAPYRGVSCYRGLTGGFGSRSVCGAFRAGSCGRSFGYRSGGVCGP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESNLEPLF GYIETLRREAE VEADSGRLASELNHVQEVLEGYKKK
Sbjct: 134  LETKWQFYQNRKCCESNLEPLFEGYIETLRREAECVEADSGRLASELNHVQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKK                                EIRVL AH
Sbjct: 194  YEEEVSLRATAENEFVALKK--------------------------------EIRVLHAH 221

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ IVAEIKAQYDDIASRSRAEAESWYRSKCEE+KATV+RHGE
Sbjct: 222  ISDTSVIVKMDNSRDLNMDCIVAEIKAQYDDIASRSRAEAESWYRSKCEEMKATVIRHGE 281

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNRMIQRLTAE+ENAKCQN+KL              L D          
Sbjct: 282  TLRRTKEEINELNRMIQRLTAEVENAKCQNTKLEAAVTQAEQQGEAALTDARCKLAELEA 341

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEE RLCEG+GA          
Sbjct: 342  ALQKAKQDMACLVKEYQEVMNSKLGLDIEIATYRRLLEGEEHRLCEGVGAVNVCVSSSRG 401

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLN--------TTCGGGSCGL 1536
                 DLCVSGSRPVTGSVCSAPCSGN+AVSTG+CAPC            T+CG G+ G+
Sbjct: 402  GVVCGDLCVSGSRPVTGSVCSAPCSGNLAVSTGMCAPCAPCAPCAPCNSITSCGLGTGGV 461

Query: 1537 G 1539
            G
Sbjct: 462  G 462


>ref|XP_543653.2| PREDICTED: similar to keratin, hair, basic, 5 [Canis familiaris].
          Length = 507

 Score =  597 bits (1540), Expect = e-171
 Identities = 322/477 (67%), Positives = 349/477 (73%), Gaps = 14/477 (2%)
 Frame = +1

Query: 127  SACGPRPG-RCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-- 297
            SA  P+ G RCCISAAPYRG+SCYRGLT                                
Sbjct: 22   SAVAPKTGNRCCISAAPYRGVSCYRGLTGFGSRSLSNLGSCGPRMAVGGFRAGSCGRSFG 81

Query: 298  --------PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKV 453
                    PSPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLNNRFAAFIDKV
Sbjct: 82   YRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNNRFAAFIDKV 141

Query: 454  RFLEQQNKLLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQ 633
            RFLEQQNKLLETK QFYQN++CCESNLEPLFNGYIETLRREAE VEAD GRLASELNHVQ
Sbjct: 142  RFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAECVEADGGRLASELNHVQ 201

Query: 634  EVLEGYKKKYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYE 813
            EVLEGYKKKYEEEVALRATAENEFV LKKDVDCAY+RKSDLEANVEALV+E  FL+RLY+
Sbjct: 202  EVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLKRLYD 261

Query: 814  EEIRVLQAHISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEI 993
            EE++VL AHISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYRSKCEE+
Sbjct: 262  EELQVLHAHISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRSKCEEM 321

Query: 994  KATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDX 1173
            KATV+RHGETLRRTKEEINELNRMIQRLTAEIENAKCQ +KL              L D 
Sbjct: 322  KATVIRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALTDA 381

Query: 1174 XXXXXXXXXXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAX 1353
                            DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEE RLCEG+G+ 
Sbjct: 382  RCKLAELEAALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEHRLCEGVGSV 441

Query: 1354 XXXXXXXXXXXXXXDLCVSGSRPVTGSVCSAPCSGNVAV-STGLCAPC--GQLNTTC 1515
                           L  S +     +   A   G++ V +   CAPC   Q + TC
Sbjct: 442  NVCVSSSRGGVACGGLTYSSTPGRQIASGPAATGGSITVMAPDSCAPCQPRQASFTC 498


>ref|XP_543654.2| PREDICTED: similar to keratin, hair, basic, 5 [Canis familiaris].
          Length = 484

 Score =  530 bits (1364), Expect = e-150
 Identities = 278/405 (68%), Positives = 317/405 (78%), Gaps = 7/405 (1%)
 Frame = +1

Query: 298  PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNK 477
            PSPPCIT+VS+NE LLTPLNLEIDPNAQCVK +EKEQIKCLNN+FAAFIDKVRFLEQQNK
Sbjct: 81   PSPPCITSVSVNESLLTPLNLEIDPNAQCVKHQEKEQIKCLNNKFAAFIDKVRFLEQQNK 140

Query: 478  LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            LLETK QFYQNR+CCESNLEPLF GY+ETLRREAE VEADSGRLASELNHVQEVLEGYKK
Sbjct: 141  LLETKWQFYQNRKCCESNLEPLFQGYLETLRREAECVEADSGRLASELNHVQEVLEGYKK 200

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYEEEVALR TAENEFV LKKD+D AY+RK+DLEANVE L +E  FL+ LYEEEI +L +
Sbjct: 201  KYEEEVALRTTAENEFVVLKKDIDSAYLRKADLEANVEVLREETAFLQALYEEEIYLLHS 260

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
             ISDTSV+VK+DNSR+LNM+++VAEIKAQYDD+ASRSRAEAESWY++KCEE+KATV + G
Sbjct: 261  QISDTSVVVKMDNSRELNMDSVVAEIKAQYDDVASRSRAEAESWYQTKCEEMKATVSQQG 320

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            E LRRTKEE++ELNR+IQRLTAE+ENAK Q  KL              L D         
Sbjct: 321  ENLRRTKEELHELNRLIQRLTAEVENAKQQRCKLEGAVAEAEQQGEAALRDAKCKLAGLE 380

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXX 1377
                    DMACL+KEYQEV+NSKLGLD+EIATYR+LLEGEE RLCEG+G+         
Sbjct: 381  EALQKAKQDMACLLKEYQEVMNSKLGLDVEIATYRKLLEGEESRLCEGVGS--------- 431

Query: 1378 XXXXXXDLCVSGSRPVTGSVCSAPCS------GNVAVSTG-LCAP 1491
                  ++CVS S+   G VC    +      G VA S+G LCAP
Sbjct: 432  -----VNICVSRSQ--GGVVCGDLSATVPRGLGGVATSSGILCAP 469


>ref|XP_860523.1| PREDICTED: similar to Keratin, type II cuticular Hb4 (Hair keratin,
            type II Hb4) isoform 2 [Canis familiaris].
          Length = 554

 Score =  423 bits (1088), Expect = e-118
 Identities = 220/397 (55%), Positives = 279/397 (70%)
 Frame = +1

Query: 298  PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNK 477
            P+ P IT V++N+ LLTPLNLEIDPNAQ VK++EKEQIK LNN+FA+FIDKVRFLEQQNK
Sbjct: 87   PAAPSITAVTVNQSLLTPLNLEIDPNAQRVKKDEKEQIKTLNNKFASFIDKVRFLEQQNK 146

Query: 478  LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            LLETK  F Q ++C  SNLEPLF  YI  LRR+ ++  +D  R  +E NH+Q+VLEG+KK
Sbjct: 147  LLETKWNFLQEQKCARSNLEPLFENYITNLRRQLDVANSDRARFEAERNHMQDVLEGFKK 206

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYEEEV  RA AENEFVALKKDVD A++ KSDLEANV+ L QEIDFL+ LY  EI++LQ+
Sbjct: 207  KYEEEVGFRANAENEFVALKKDVDTAFLNKSDLEANVDTLTQEIDFLKTLYMAEIQLLQS 266

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            HIS+TSVIVK+DNSRDLN++ I+ E+KAQY+++A RSRA+AE+WY++K EE++ T  +H 
Sbjct: 267  HISETSVIVKMDNSRDLNVDGIIDEVKAQYEEVARRSRADAEAWYQTKYEEMRVTASQHC 326

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR T++EINEL R+IQRL AEIE+AK Q +KL              L D         
Sbjct: 327  DNLRNTRDEINELTRLIQRLKAEIEHAKSQRAKLEAAVAEAEQQGEAALTDAKCKLAELE 386

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXX 1377
                    DMA  ++EYQE++N KL LDIEIATYRRLLEGEE R+CEG+G          
Sbjct: 387  GALQQAKQDMARQLREYQELMNVKLALDIEIATYRRLLEGEEIRICEGVGPVNISVSSSR 446

Query: 1378 XXXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCA 1488
                     ++ S  ++ S  + P SG+   S   CA
Sbjct: 447  GGTVCGPDALAASAALSRSAVTCP-SGSGIRSVSTCA 482


>ref|XP_543652.1| PREDICTED: similar to Keratin, type II cuticular Hb4 (Hair keratin,
            type II Hb4) isoform 1 [Canis familiaris].
          Length = 586

 Score =  423 bits (1088), Expect = e-118
 Identities = 220/397 (55%), Positives = 279/397 (70%)
 Frame = +1

Query: 298  PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNK 477
            P+ P IT V++N+ LLTPLNLEIDPNAQ VK++EKEQIK LNN+FA+FIDKVRFLEQQNK
Sbjct: 119  PAAPSITAVTVNQSLLTPLNLEIDPNAQRVKKDEKEQIKTLNNKFASFIDKVRFLEQQNK 178

Query: 478  LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            LLETK  F Q ++C  SNLEPLF  YI  LRR+ ++  +D  R  +E NH+Q+VLEG+KK
Sbjct: 179  LLETKWNFLQEQKCARSNLEPLFENYITNLRRQLDVANSDRARFEAERNHMQDVLEGFKK 238

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYEEEV  RA AENEFVALKKDVD A++ KSDLEANV+ L QEIDFL+ LY  EI++LQ+
Sbjct: 239  KYEEEVGFRANAENEFVALKKDVDTAFLNKSDLEANVDTLTQEIDFLKTLYMAEIQLLQS 298

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            HIS+TSVIVK+DNSRDLN++ I+ E+KAQY+++A RSRA+AE+WY++K EE++ T  +H 
Sbjct: 299  HISETSVIVKMDNSRDLNVDGIIDEVKAQYEEVARRSRADAEAWYQTKYEEMRVTASQHC 358

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR T++EINEL R+IQRL AEIE+AK Q +KL              L D         
Sbjct: 359  DNLRNTRDEINELTRLIQRLKAEIEHAKSQRAKLEAAVAEAEQQGEAALTDAKCKLAELE 418

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXX 1377
                    DMA  ++EYQE++N KL LDIEIATYRRLLEGEE R+CEG+G          
Sbjct: 419  GALQQAKQDMARQLREYQELMNVKLALDIEIATYRRLLEGEEIRICEGVGPVNISVSSSR 478

Query: 1378 XXXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCA 1488
                     ++ S  ++ S  + P SG+   S   CA
Sbjct: 479  GGTVCGPDALAASAALSRSAVTCP-SGSGIRSVSTCA 514


>ref|XP_543651.2| PREDICTED: similar to keratin complex 2, basic, gene 20 [Canis
            familiaris].
          Length = 518

 Score =  415 bits (1067), Expect = e-116
 Identities = 227/407 (55%), Positives = 279/407 (68%), Gaps = 1/407 (0%)
 Frame = +1

Query: 310  CITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLLET 489
            CI  V+INE LL PL LEIDP  Q VK++EKEQIKCLNNRFA+FI+KVRFLEQ+NKLLET
Sbjct: 89   CIAPVTINESLLVPLELEIDPAVQRVKRDEKEQIKCLNNRFASFINKVRFLEQKNKLLET 148

Query: 490  KLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEE 669
            K  F Q ++CC+SN+EP+F  YI  LRR+ + V  D  RL SEL  +Q+ LE YKKKYEE
Sbjct: 149  KWNFMQQQRCCQSNIEPIFEAYICALRRQLDCVAGDRARLESELCSLQDALESYKKKYEE 208

Query: 670  EVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAHISD 849
            E++LR  AENEFVALKK+VD A++ K+DLE N EALVQEIDFL+ LYEEE+ +LQ+ IS+
Sbjct: 209  ELSLRPCAENEFVALKKEVDTAFLIKADLETNAEALVQEIDFLKGLYEEEMCLLQSQISE 268

Query: 850  TSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGETLR 1029
            TSVIVK+DNSR+L+++ I+AEIKAQYDDIASRS+AEAE+WY+S+ EE++ T   H + LR
Sbjct: 269  TSVIVKMDNSRELDVDGIIAEIKAQYDDIASRSKAEAEAWYQSRYEELRLTAGNHCDNLR 328

Query: 1030 RTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXXXXX 1209
              K EI E+N++IQRL  EIE  K Q  KL              L D             
Sbjct: 329  NRKNEILEMNKLIQRLQQEIEAVKAQRCKLEAAVTQAEQQGEAALGDAKCKLAGLEAALQ 388

Query: 1210 XXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXXXXX 1389
                DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEE RLCEGIG              
Sbjct: 389  KAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEHRLCEGIG-------------- 434

Query: 1390 XXDLCVSGSRPVTGSVCSAPCSGNVAV-STGLCAPCGQLNTTCGGGS 1527
              ++ VS S+   G+V   PC+ +  V  T  C     +  + GG S
Sbjct: 435  PVNISVSSSK---GAVLYEPCTVSTPVLRTEYCPGAPGVLKSSGGCS 478


>ref|XP_543650.2| PREDICTED: similar to cytokeratin type II [Canis familiaris].
          Length = 975

 Score =  358 bits (919), Expect = 9e-99
 Identities = 202/410 (49%), Positives = 267/410 (65%), Gaps = 1/410 (0%)
 Frame = +1

Query: 313  ITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLLETK 492
            I  V++N+ LLTPL+LEIDP+ Q V++EEKEQIK LNN+FA+FIDKVRFLEQQNK+LETK
Sbjct: 559  IQEVTVNQSLLTPLHLEIDPSLQRVRKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLETK 618

Query: 493  LQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEEE 672
                Q  +   +N+EP+F  YI  LRR+ E +  +  RL SEL ++Q+V+E +K KYEEE
Sbjct: 619  WSLLQEHKTTRANIEPMFEAYISNLRRQLECLGGERTRLESELKNMQDVVEDFKNKYEEE 678

Query: 673  VALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAHISDT 852
            +  R  AENEFV LKKDVD AY+ K +LEA V+AL+ EI+FLR  Y+ E+  LQA IS+T
Sbjct: 679  INRRTVAENEFVVLKKDVDAAYMNKVELEAKVDALMDEINFLRAFYDAELAQLQAQISET 738

Query: 853  SVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGETLRR 1032
            SV++ +DN+R L++++I++E+KAQY+DIA+RSRAEAESWY++K EE++ +  RHG+ LR 
Sbjct: 739  SVVLSMDNNRKLDLDSIISEVKAQYEDIANRSRAEAESWYQTKYEELQRSAGRHGDDLRT 798

Query: 1033 TKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXXXXXX 1212
            TK EI+ELNR++QRL +EI+N K Q + +              L D              
Sbjct: 799  TKMEISELNRVMQRLRSEIDNLKKQCATMQSAIADAEQRGELALKDAKHKLAELEDALQK 858

Query: 1213 XXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLC-EGIGAXXXXXXXXXXXXX 1389
               DMA  ++EYQE++N KL LDIEIATYR+LLEGEE RL  EG+G              
Sbjct: 859  AKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEECRLTGEGVG-------------- 904

Query: 1390 XXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSCGLG 1539
                      PV  SV S+  SG    S+G     G L  T GG S  LG
Sbjct: 905  ----------PVNISVVSS--SGGTGYSSG----GGSLCMTGGGYSSSLG 938



 Score =  355 bits (912), Expect = 6e-98
 Identities = 186/350 (53%), Positives = 250/350 (71%), Gaps = 3/350 (0%)
 Frame = +1

Query: 304  PPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLL 483
            P  I  V++N+ LLTPLNL+IDP  Q V++EE+EQIK LNN+FA+FIDKVRFLEQQNK+L
Sbjct: 118  PGGIQEVTVNQSLLTPLNLQIDPAIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVL 177

Query: 484  ETKLQFYQNR--QCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            ETK +  Q +  +    NLEP F+ YI  LRR+ + V  + GRL +EL ++Q+V+E +K 
Sbjct: 178  ETKWELLQEQGSKTVRQNLEPFFDTYINDLRRQLDSVTTERGRLDAELRNMQDVVEDFKV 237

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            +YE+E+  R  AENEFVALKKDVD AY+ K +LEA V +L  EI+FLR L+E E+  +Q 
Sbjct: 238  RYEDEINKRTAAENEFVALKKDVDSAYMNKVELEAKVNSLTDEINFLRMLFEAELSQMQT 297

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
             +SDTSV++ +DN+R L++++I+AE+KAQY+DIA+RSRAEAESWY++K EE++ T  RHG
Sbjct: 298  QVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQVTAGRHG 357

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR TK+EI+E+NR+IQRL AEI++ K Q S L              L D         
Sbjct: 358  DDLRNTKQEISEMNRVIQRLRAEIDSIKKQCSSLQTAIADAEQRGELALKDARAKLVDLE 417

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLC-EGI 1344
                    DMA L++EYQE++N KL LD+EIATYR+LLEGEE RL  EG+
Sbjct: 418  EALQKAKQDMARLLREYQELMNVKLALDVEIATYRKLLEGEECRLSGEGV 467


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 58,985,544
Number of extensions: 1620002
Number of successful extensions: 10379
Number of sequences better than 1.0e-05: 118
Number of HSP's gapped: 9970
Number of HSP's successfully gapped: 137
Length of query: 591
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 483
Effective length of database: 15,274,216
Effective search space: 7377446328
Effective search space used: 7377446328
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012161
         (1774 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003126205.1| PREDICTED: keratin, type II cuticular Hb3-li...   772   0.0  
Alignment   gi|XP_003126201.1| PREDICTED: keratin, type II cuticular Hb1-li...   736   0.0  
Alignment   gi|XP_003126204.1| PREDICTED: keratin, type II cuticular Hb1-li...   731   0.0  
Alignment   gi|XP_003126207.1| PREDICTED: keratin, type II cuticular Hb5 [S...   600   e-172
Alignment   gi|XP_003355442.1| PREDICTED: keratin, type II microfibrillar, ...   568   e-162
Alignment   gi|XP_003126215.2| PREDICTED: keratin, type II cuticular Hb5-li...   494   e-140
Alignment   gi|XP_003355443.1| PREDICTED: keratin, type II microfibrillar, ...   439   e-123
Alignment   gi|XP_003126206.1| PREDICTED: keratin, type II cuticular Hb2 [S...   427   e-119
Alignment   gi|XP_003126221.1| PREDICTED: keratin, type II cytoskeletal 5 [...   360   1e-99
Alignment   gi|XP_003355441.1| PREDICTED: keratin, type II cytoskeletal 75-...   358   7e-99

>ref|XP_003126205.1| PREDICTED: keratin, type II cuticular Hb3-like [Sus scrofa].
          Length = 493

 Score =  772 bits (1993), Expect = 0.0
 Identities = 398/475 (83%), Positives = 398/475 (83%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGLT                              P
Sbjct: 19   CASACGPRPGRCCISAAPYRGISCYRGLTGGFGSRSVGGGFRAGSYGRSFGYRSGGVVRP 78

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQ KL
Sbjct: 79   SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQTKL 138

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK
Sbjct: 139  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 198

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH
Sbjct: 199  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 258

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE
Sbjct: 259  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 318

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNRMIQRLTAEIENAKCQNSKL              LND          
Sbjct: 319  TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLEAAVAEAEQQGEVALNDAKCKLAELEA 378

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGA          
Sbjct: 379  ALQKAKQDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAVNVCVSSSRG 438

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSCGLGRY 1545
                 DLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSCGLGRY
Sbjct: 439  GVVCGDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSCGLGRY 493


>ref|XP_003126201.1| PREDICTED: keratin, type II cuticular Hb1-like isoform 1 [Sus
            scrofa].
          Length = 497

 Score =  736 bits (1900), Expect = 0.0
 Identities = 383/475 (80%), Positives = 391/475 (82%), Gaps = 2/475 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGLT                              P
Sbjct: 14   CASACGPRPGRCCISAAPYRGISCYRGLTGGFGSRSVGGGFRAGSYGRSFGYRSGGVVRP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIK LNNRFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKFLNNRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK
Sbjct: 134  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH
Sbjct: 194  YEEEVALRATAENEFVALKKDVDCAYVRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVKLDNSRDLNM+NIVAEIKA YDDIASRSRAEAESWYRSKCEEIKATVVRHGE
Sbjct: 254  ISDTSVIVKLDNSRDLNMDNIVAEIKAHYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNRMIQRLTAEIENAKCQNSKL              LND          
Sbjct: 314  TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLEAAVAEAEQQGEVALNDAKCKLAELEA 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEG+G+          
Sbjct: 374  ALQKAKQDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGVGSVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLN--TTCGGGSCGLG 1539
                 DLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCG  +  T+CG G+ G+G
Sbjct: 434  GVVCGDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGPCSSVTSCGLGTGGVG 488


>ref|XP_003126204.1| PREDICTED: keratin, type II cuticular Hb1-like isoform 4 [Sus
            scrofa].
          Length = 498

 Score =  731 bits (1888), Expect = 0.0
 Identities = 383/476 (80%), Positives = 391/476 (82%), Gaps = 3/476 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGLT                              P
Sbjct: 14   CASACGPRPGRCCISAAPYRGISCYRGLTGGFGSRSVGGGFRAGSYGRSFGYRSGGVVRP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIK LNNRFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKFLNNRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK
Sbjct: 134  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 193

Query: 661  -YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
             YEEEVALRATAENEFVALKKDVDCAY+RKSDLEANVEALVQEIDFLRRLYEEEIRVLQA
Sbjct: 194  RYEEEVALRATAENEFVALKKDVDCAYVRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 253

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            HISDTSVIVKLDNSRDLNM+NIVAEIKA YDDIASRSRAEAESWYRSKCEEIKATVVRHG
Sbjct: 254  HISDTSVIVKLDNSRDLNMDNIVAEIKAHYDDIASRSRAEAESWYRSKCEEIKATVVRHG 313

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKL              LND         
Sbjct: 314  ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLEAAVAEAEQQGEVALNDAKCKLAELE 373

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXX 1377
                    DMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEG+G+         
Sbjct: 374  AALQKAKQDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGVGSVNVCVSSSR 433

Query: 1378 XXXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLN--TTCGGGSCGLG 1539
                  DLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCG  +  T+CG G+ G+G
Sbjct: 434  GGVVCGDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGPCSSVTSCGLGTGGVG 489


>ref|XP_003126207.1| PREDICTED: keratin, type II cuticular Hb5 [Sus scrofa].
          Length = 507

 Score =  600 bits (1548), Expect = e-172
 Identities = 330/498 (66%), Positives = 358/498 (71%), Gaps = 26/498 (5%)
 Frame = +1

Query: 127  SACGPRPG-RCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-- 297
            SA  P+ G RCCISAAPYRG+SCYRGLT                                
Sbjct: 22   SAVAPKTGSRCCISAAPYRGVSCYRGLTGFGSRSVSALGSSGPRIAVGGFRAGSGGRSFG 81

Query: 298  --------PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKV 453
                    PSPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIK LN+RFAAFIDKV
Sbjct: 82   YRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKNLNSRFAAFIDKV 141

Query: 454  RFLEQQNKLLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQ 633
            RFLEQQNKLLETK QFYQN++CCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQ
Sbjct: 142  RFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQ 201

Query: 634  EVLEGYKKKYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYE 813
            EVLEGYKKKYEEEVALRATAENEFV LKKDVDCAY+RKSDLEANVEALV+E  FL+RLY+
Sbjct: 202  EVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLKRLYD 261

Query: 814  EEIRVLQAHISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEI 993
            EE+++L AHISDTSVIVK+DNSRDLNMN +VAEIKAQYDD+ASRSRAEAESWYRSKCEE+
Sbjct: 262  EELQILHAHISDTSVIVKMDNSRDLNMNCVVAEIKAQYDDVASRSRAEAESWYRSKCEEM 321

Query: 994  KATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDX 1173
            KATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQ +KL              LND 
Sbjct: 322  KATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDA 381

Query: 1174 XXXXXXXXXXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAX 1353
                            DMACL+KEYQEVLNSKLGLDIEIATYRRLLEGEE RLCEG+G+ 
Sbjct: 382  RCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGS- 440

Query: 1354 XXXXXXXXXXXXXXDLCVSGSRPVTGS------------VCSAPCS--GNVAV-STGLCA 1488
                          ++CVS SR    S            + S P +  G++ V +   CA
Sbjct: 441  -------------VNVCVSSSRGGVSSGGLTYSTTPGRQITSGPVATGGSITVMAPDSCA 487

Query: 1489 PCGQLNTTCGGGSCGLGR 1542
            PC          SCG  R
Sbjct: 488  PC---QPRASSFSCGSSR 502


>ref|XP_003355442.1| PREDICTED: keratin, type II microfibrillar, component 7C-like [Sus
            scrofa].
          Length = 477

 Score =  568 bits (1464), Expect = e-162
 Identities = 295/410 (71%), Positives = 324/410 (79%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SA GPRPGRCCI+AAPYRG+SCYRGLT                              P
Sbjct: 28   CTSASGPRPGRCCITAAPYRGVSCYRGLTGGFGSRSVSGGFGAGSSGRSFGYRSGGVVRP 87

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVSINE LL PLNLEID NAQ VKQEEKEQIK LN+RFAAFIDKVRFLEQQNKL
Sbjct: 88   SPPCITTVSINESLLAPLNLEIDHNAQSVKQEEKEQIKILNSRFAAFIDKVRFLEQQNKL 147

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQF+QNR+CCESNLEPLFNGYIETLRREAE VEAD GRLASELNHV EVLEGYKKK
Sbjct: 148  LETKLQFFQNRKCCESNLEPLFNGYIETLRREAERVEADRGRLASELNHVHEVLEGYKKK 207

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALR TAENEFV +K++V+   ++K+DL+AN ++L +E+ FL+ LYEEEIRVLQAH
Sbjct: 208  YEEEVALRTTAENEFVRIKQEVNSLSVQKADLKANAQSLAEEVGFLKTLYEEEIRVLQAH 267

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDT VIVK+DNSRDLNM++I+AEIKA YDDIASRSRAEAESWYR+K EEIKATVV+HGE
Sbjct: 268  ISDTLVIVKMDNSRDLNMDSIIAEIKAHYDDIASRSRAEAESWYRTKYEEIKATVVQHGE 327

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNR+IQRLTAEIENAK QNSKL              LND          
Sbjct: 328  TLRRTKEEINELNRVIQRLTAEIENAKRQNSKLEAAVSQAEQQGQAALNDARYKLTELEA 387

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGA 1350
                   DMA L+KEYQEV++SKL LDIEIATYRRLLEGEEQRLCEG+GA
Sbjct: 388  ALQKAKQDMAFLLKEYQEVMSSKLALDIEIATYRRLLEGEEQRLCEGVGA 437


>ref|XP_003126215.2| PREDICTED: keratin, type II cuticular Hb5-like [Sus scrofa].
          Length = 492

 Score =  494 bits (1272), Expect = e-140
 Identities = 262/404 (64%), Positives = 311/404 (76%), Gaps = 7/404 (1%)
 Frame = +1

Query: 298  PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNK 477
            PSPP ITTVSI E LLTPLNLEIDP AQCVKQEEKEQ KCLNNRFAAF D+VRFLEQQNK
Sbjct: 89   PSPPYITTVSIIEGLLTPLNLEIDPKAQCVKQEEKEQTKCLNNRFAAFTDEVRFLEQQNK 148

Query: 478  LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            LLETK QFYQNR+CC+S+LE LFNGYIE LRREAE VEADSGRLASELNHVQEVLEGY+K
Sbjct: 149  LLETKWQFYQNRKCCKSSLELLFNGYIEMLRREAECVEADSGRLASELNHVQEVLEGYRK 208

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYEEEVAL+A AENEFV LKKD+DCAY+RK+DLEANVEAL +E+ FLR L++EEI +LQ+
Sbjct: 209  KYEEEVALKAAAENEFVVLKKDIDCAYLRKADLEANVEALKEEMGFLRSLHDEEIYLLQS 268

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
             ISDTSV+VK+DNSR+L+ +++VA+IK QYD++ASR++AEA+SWY++KCE+ KATV + G
Sbjct: 269  QISDTSVVVKMDNSRELSRDSVVADIKGQYDNVASRNQAEAKSWYQTKCEQFKATVTQQG 328

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            ETL RTKE+I EL R+IQRLTAE+EN K Q  KL              LND         
Sbjct: 329  ETLCRTKEDIKELTRVIQRLTAEVENTKQQRCKLEANVAEAEQQGKAALNDAHCKLADLE 388

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXX 1377
                    DMACL+KEYQEVLNSKLGL +EIATYR+LLEGEE RLCEG+G+         
Sbjct: 389  AALQKARQDMACLVKEYQEVLNSKLGLHVEIATYRKLLEGEETRLCEGVGS--------- 439

Query: 1378 XXXXXXDLCVSGSRPVTGSVCSAPCS------GNVAVSTG-LCA 1488
                  ++CVS S+   G V   P S      G++++S+G LC+
Sbjct: 440  -----INICVSHSQ--GGVVYGGPGSTVPRGLGSMSISSGALCS 476


>ref|XP_003355443.1| PREDICTED: keratin, type II microfibrillar, component 7C-like,
           partial [Sus scrofa].
          Length = 284

 Score =  439 bits (1128), Expect = e-123
 Identities = 225/266 (84%), Positives = 230/266 (86%), Gaps = 1/266 (0%)
 Frame = +1

Query: 121 CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
           CASACGPRPGRCCISAAPYRGISCYRGLT                              P
Sbjct: 19  CASACGPRPGRCCISAAPYRGISCYRGLTGGFSSRSVGGGFRAGSGGRSFGYRSGGVVRP 78

Query: 301 SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKV-RFLEQQNK 477
           SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIK LNNRFAAFIDKV   LEQQNK
Sbjct: 79  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKFLNNRFAAFIDKVGALLEQQNK 138

Query: 478 LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
           LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK
Sbjct: 139 LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 198

Query: 658 KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
           KYEEEVALRATAENEFVALKKDVDCAY++KSDLEANVEAL QEIDFLRRLYEEE+RVL A
Sbjct: 199 KYEEEVALRATAENEFVALKKDVDCAYVQKSDLEANVEALTQEIDFLRRLYEEELRVLHA 258

Query: 838 HISDTSVIVKLDNSRDLNMNNIVAEI 915
           HISDTSVIVK+DNSRDL+MNNIVAEI
Sbjct: 259 HISDTSVIVKMDNSRDLDMNNIVAEI 284


>ref|XP_003126206.1| PREDICTED: keratin, type II cuticular Hb2 [Sus scrofa].
          Length = 514

 Score =  427 bits (1097), Expect = e-119
 Identities = 230/410 (56%), Positives = 283/410 (69%)
 Frame = +1

Query: 310  CITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLLET 489
            CIT V+INE LL PL LEIDP+ Q VK++EKEQIKCLNNRFA+FI+KVRFLEQ+NKLLET
Sbjct: 89   CITPVTINESLLVPLELEIDPSVQRVKRDEKEQIKCLNNRFASFINKVRFLEQKNKLLET 148

Query: 490  KLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEE 669
            K  F Q ++CC++N+EP+F  YI  LRR+ + V  D  RL SEL  VQE LE YKKKYEE
Sbjct: 149  KWNFMQQQRCCQNNIEPIFEAYICALRRQLDCVAGDRARLESELCSVQETLEAYKKKYEE 208

Query: 670  EVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAHISD 849
            E++LR  AENEFVALKKDVD A+++K+DLE N EAL+QE+DFLR LY+EEI +LQ+ IS+
Sbjct: 209  ELSLRPCAENEFVALKKDVDTAFLKKADLETNTEALIQELDFLRSLYDEEICLLQSQISE 268

Query: 850  TSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGETLR 1029
            TSVIVK+DNSR+L+++ I+AEIKAQYD+IASRS+AEAE+WY+ + EE++ T   H + LR
Sbjct: 269  TSVIVKMDNSRELDVDGIIAEIKAQYDEIASRSKAEAEAWYQGRYEELRLTAGNHCDNLR 328

Query: 1030 RTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXXXXX 1209
              K EI E+N++IQRL  +IEN K Q  KL              LND             
Sbjct: 329  NRKNEILEMNKLIQRLQQDIENVKAQRCKLEGTIAEAEQQGEAALNDAKCKLAGLEEALQ 388

Query: 1210 XXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXXXXX 1389
                DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEE RLCEGIG              
Sbjct: 389  KAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEHRLCEGIG-------------- 434

Query: 1390 XXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSCGLG 1539
              ++ VS S+   G+V   PC     VST +  P G       GG   +G
Sbjct: 435  PVNISVSSSK---GAVLYEPC----VVSTPVYCPGGPSVLKSSGGCSIVG 477


>ref|XP_003126221.1| PREDICTED: keratin, type II cytoskeletal 5 [Sus scrofa].
          Length = 602

 Score =  360 bits (925), Expect = 1e-99
 Identities = 186/351 (52%), Positives = 250/351 (71%), Gaps = 3/351 (0%)
 Frame = +1

Query: 304  PPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLL 483
            P  I  V++N+ LLTPLNL+IDP  Q V+ EE+EQIK LNN+FA+FIDKVRFLEQQNK+L
Sbjct: 142  PGGIQEVTVNQSLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVL 201

Query: 484  ETKLQFYQNR--QCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            +TK    Q +  +    NLEPLF  YI  LRR+ + +  + GRL SEL ++Q+++E +K 
Sbjct: 202  DTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDFKN 261

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYE+E+  R TAENEFV LKKDVD AY+ K +LEA V+AL+ EI+F +  +E E+  +Q 
Sbjct: 262  KYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFTKMFFEAELSQMQT 321

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            H+SDTSV++ +DN+R+L++++I+AE+KAQY+DIA+RSR EAESWY++K EE++ T  RHG
Sbjct: 322  HVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRTEAESWYQTKYEELQQTAGRHG 381

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR TK EI+E+NRMIQRL AEI+N K Q + L              L D         
Sbjct: 382  DDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELE 441

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLC-EGIG 1347
                    DMA L++EYQE++N+KL LD+EIATYR+LLEGEE RL  EG+G
Sbjct: 442  DALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVG 492


>ref|XP_003355441.1| PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa].
          Length = 526

 Score =  358 bits (918), Expect = 7e-99
 Identities = 199/406 (49%), Positives = 261/406 (64%), Gaps = 1/406 (0%)
 Frame = +1

Query: 313  ITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLLETK 492
            I  V++N+ LLTPL+LEIDP+ Q V++EE+EQIK LNN+FA+FIDKVRFLEQQNK+LETK
Sbjct: 115  IQEVTVNQSLLTPLHLEIDPSLQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETK 174

Query: 493  LQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEEE 672
                Q  +   +N+EP+F  YI  LRR+ + +  +  RL  EL  +Q+V+E +K KYEEE
Sbjct: 175  WSLLQEHKTTRANIEPMFEAYISNLRRQLDSLGGERSRLEVELKSMQDVVEDFKNKYEEE 234

Query: 673  VALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAHISDT 852
            +  R  AENEFV LKKDVD AY+ K +LEA VEAL+ EI+FLR  Y+ E+  LQA IS+T
Sbjct: 235  INRRTVAENEFVVLKKDVDAAYMSKVELEAKVEALMDEINFLRAFYDAELAQLQAQISET 294

Query: 853  SVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGETLRR 1032
            SVI+ +DN+R L++++I++E+KAQY+DIA+RSRAEAESWY+ K EE++ +  RHG+ LR 
Sbjct: 295  SVILSMDNNRKLDLDSIISEVKAQYEDIANRSRAEAESWYQIKYEELQRSAGRHGDDLRS 354

Query: 1033 TKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXXXXXX 1212
            TK EI+ELNR+IQRL +EI+N K Q + L              L D              
Sbjct: 355  TKMEISELNRVIQRLRSEIDNLKKQCATLQSAIADAEQRGELALKDAKHKLAELEDALQK 414

Query: 1213 XXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLC-EGIGAXXXXXXXXXXXXX 1389
               DMA  ++EYQE++N KL LDIEIATYR+LLEGEE RL  EG+G              
Sbjct: 415  AKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEECRLTGEGVG-------------- 460

Query: 1390 XXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGS 1527
                      PV  SV S+      +   GLC   G L+    GGS
Sbjct: 461  ----------PVNISVVSSSGGSGYSSGGGLCMTGGGLSYGSSGGS 496


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 36,455,807
Number of extensions: 1013002
Number of successful extensions: 6222
Number of sequences better than 1.0e-05: 61
Number of HSP's gapped: 5949
Number of HSP's successfully gapped: 65
Length of query: 591
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 486
Effective length of database: 8,729,747
Effective search space: 4242657042
Effective search space used: 4242657042
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012161
         (1774 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001188252.1| type II hair keratin [Mus musculus].              682   0.0  
Alignment   gi|XP_003086030.1| PREDICTED: keratin, type II cuticular Hb6 is...   680   0.0  
Alignment   gi|XP_003085115.1| PREDICTED: keratin, type II cuticular Hb6 is...   678   0.0  
Alignment   gi|XP_003086031.1| PREDICTED: keratin, type II cuticular Hb6 is...   676   0.0  
Alignment   gi|NP_001159629.1| keratin, type II cuticular Hb1 [Mus musculus].    672   0.0  
Alignment   gi|NP_034797.1| keratin, type II cuticular Hb6 [Mus musculus].       650   0.0  
Alignment   gi|XP_003085116.1| PREDICTED: keratin, type II cuticular Hb6 is...   615   e-176
Alignment   gi|XP_003086032.1| PREDICTED: keratin, type II cuticular Hb6 is...   615   e-176
Alignment   gi|NP_001003668.2| keratin, type II cuticular Hb3 [Mus musculus].    612   e-175
Alignment   gi|XP_003085117.1| PREDICTED: keratin, type II cuticular Hb6 is...   600   e-172

>ref|NP_001188252.1| type II hair keratin [Mus musculus].
          Length = 479

 Score =  682 bits (1761), Expect = 0.0
 Identities = 346/470 (73%), Positives = 372/470 (79%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 12   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 71

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 72   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 131

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIETLRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 132  LETKWQFYQNRKCCESNMEPLFEGYIETLRREAECVEADSGRLAAELNHAQESMEGYKKR 191

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 192  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 251

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+KATV+RHGE
Sbjct: 252  ISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGE 311

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQN+KL              L D          
Sbjct: 312  TLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEG 371

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+GA          
Sbjct: 372  ALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVGAVNVCVSSSRG 431

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSC 1530
                 DLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCG  +  C  G C
Sbjct: 432  GVVCGDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCG--SGPCHPGRC 479


>ref|XP_003086030.1| PREDICTED: keratin, type II cuticular Hb6 isoform 1 [Mus musculus].
          Length = 479

 Score =  680 bits (1755), Expect = 0.0
 Identities = 345/470 (73%), Positives = 371/470 (78%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 12   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 71

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 72   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 131

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIETLRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 132  LETKWQFYQNRKCCESNMEPLFEGYIETLRREAECVEADSGRLAAELNHAQESMEGYKKR 191

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 192  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 251

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+KATV+RHGE
Sbjct: 252  ISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGE 311

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQN+KL              L D          
Sbjct: 312  TLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEG 371

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+GA          
Sbjct: 372  ALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVGAVNVCVSSSRG 431

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSC 1530
                 DLCVSG RPVTGSVCSAPCSGNVAVSTGLCAPCG  +  C  G C
Sbjct: 432  GVVCGDLCVSGLRPVTGSVCSAPCSGNVAVSTGLCAPCG--SGPCHPGRC 479


>ref|XP_003085115.1| PREDICTED: keratin, type II cuticular Hb6 isoform 2 [Mus musculus].
          Length = 479

 Score =  678 bits (1750), Expect = 0.0
 Identities = 345/470 (73%), Positives = 370/470 (78%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 12   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 71

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 72   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 131

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIETLRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 132  LETKWQFYQNRKCCESNMEPLFEGYIETLRREAECVEADSGRLAAELNHAQESMEGYKKR 191

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 192  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 251

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+KATV+RHGE
Sbjct: 252  ISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGE 311

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQ  KL              L D          
Sbjct: 312  TLRRTREEINELNRMIQRLTAEIENAKCQVCKLEAAVTQSEQQGEAALADARCKLAELEG 371

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+GA          
Sbjct: 372  ALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVGAVNVCVSSSRG 431

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSC 1530
                 DLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCG  +  C  G C
Sbjct: 432  GVVCGDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCG--SGPCHPGRC 479


>ref|XP_003086031.1| PREDICTED: keratin, type II cuticular Hb6 isoform 2 [Mus musculus].
          Length = 479

 Score =  676 bits (1744), Expect = 0.0
 Identities = 344/470 (73%), Positives = 369/470 (78%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 12   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 71

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 72   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 131

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIETLRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 132  LETKWQFYQNRKCCESNMEPLFEGYIETLRREAECVEADSGRLAAELNHAQESMEGYKKR 191

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 192  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 251

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+KATV+RHGE
Sbjct: 252  ISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGE 311

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQ  KL              L D          
Sbjct: 312  TLRRTREEINELNRMIQRLTAEIENAKCQVCKLEAAVTQSEQQGEAALADARCKLAELEG 371

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+GA          
Sbjct: 372  ALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVGAVNVCVSSSRG 431

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSC 1530
                 DLCVSG RPVTGSVCSAPCSGNVAVSTGLCAPCG  +  C  G C
Sbjct: 432  GVVCGDLCVSGLRPVTGSVCSAPCSGNVAVSTGLCAPCG--SGPCHPGRC 479


>ref|NP_001159629.1| keratin, type II cuticular Hb1 [Mus musculus].
          Length = 481

 Score =  672 bits (1735), Expect = 0.0
 Identities = 337/466 (72%), Positives = 368/466 (78%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 14   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN++FAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSKFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIE LRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 134  LETKWQFYQNRKCCESNMEPLFEGYIEALRREAECVEADSGRLAAELNHAQESMEGYKKR 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 194  YEEEVSLRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTS++VK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEEIKATV+RHGE
Sbjct: 254  ISDTSIVVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEIKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQN+KL              L D          
Sbjct: 314  TLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEG 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+GA          
Sbjct: 374  ALQKAKQDMACLLKEYQEVMNSKLGLDVEITTYRRLLEGEEQRLCEGVGAVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCG 1518
                 DLCVSGSRPV GS CSAPCSGN+AV+TGLCAPCG    +CG
Sbjct: 434  GVVCGDLCVSGSRPVIGSACSAPCSGNLAVNTGLCAPCGSA-VSCG 478


>ref|NP_034797.1| keratin, type II cuticular Hb6 [Mus musculus].
          Length = 486

 Score =  650 bits (1676), Expect = 0.0
 Identities = 330/469 (70%), Positives = 360/469 (76%), Gaps = 2/469 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 14   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN++FAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSKFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIE LRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 134  LETKWQFYQNRKCCESNMEPLFEGYIEALRREAECVEADSGRLAAELNHAQESMEGYKKR 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 194  YEEEVSLRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTS++VK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEEIKATV+RHGE
Sbjct: 254  ISDTSIVVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEIKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQN+KL              L D          
Sbjct: 314  TLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEG 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+G+          
Sbjct: 374  ALQKAKQDMACLLKEYQEVMNSKLGLDVEITTYRRLLEGEEQRLCEGVGSVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRP-VTGSVCSAPCSGNVAVST-GLCAPCGQLNTTCGG 1521
                 DLCVSG+ P V   VCSAPCSGNV V T   CAPC       GG
Sbjct: 434  GVVCGDLCVSGTAPAVNTRVCSAPCSGNVVVGTPNACAPCAGAGACSGG 482


>ref|XP_003085116.1| PREDICTED: keratin, type II cuticular Hb6 isoform 3 [Mus musculus].
          Length = 589

 Score =  615 bits (1585), Expect = e-176
 Identities = 309/410 (75%), Positives = 334/410 (81%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 12   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 71

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 72   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 131

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIETLRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 132  LETKWQFYQNRKCCESNMEPLFEGYIETLRREAECVEADSGRLAAELNHAQESMEGYKKR 191

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 192  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 251

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+KATV+RHGE
Sbjct: 252  ISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGE 311

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQN+KL              L D          
Sbjct: 312  TLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEG 371

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGA 1350
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+GA
Sbjct: 372  ALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVGA 421


>ref|XP_003086032.1| PREDICTED: keratin, type II cuticular Hb6 isoform 3 [Mus musculus].
          Length = 589

 Score =  615 bits (1585), Expect = e-176
 Identities = 309/410 (75%), Positives = 334/410 (81%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 12   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 71

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 72   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 131

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIETLRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 132  LETKWQFYQNRKCCESNMEPLFEGYIETLRREAECVEADSGRLAAELNHAQESMEGYKKR 191

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 192  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 251

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+KATV+RHGE
Sbjct: 252  ISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGE 311

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQN+KL              L D          
Sbjct: 312  TLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEG 371

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGA 1350
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+GA
Sbjct: 372  ALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVGA 421


>ref|NP_001003668.2| keratin, type II cuticular Hb3 [Mus musculus].
          Length = 495

 Score =  612 bits (1577), Expect = e-175
 Identities = 311/433 (71%), Positives = 341/433 (78%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 19   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSRSVCGPFRSGSCGRSFGYRSGGVCGP 78

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN++FAAFIDKVRFLEQQNKL
Sbjct: 79   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSKFAAFIDKVRFLEQQNKL 138

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIE LRREAE VEADSGRLA+ELNHVQE +EGYKK+
Sbjct: 139  LETKWQFYQNRKCCESNMEPLFEGYIEALRREAECVEADSGRLAAELNHVQESMEGYKKR 198

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRAT+ENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLR+LYEEE R+L +H
Sbjct: 199  YEEEVALRATSENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRQLYEEETRLLHSH 258

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSV+VK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+KATV+RHGE
Sbjct: 259  ISDTSVVVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGE 318

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQN+KL              L D          
Sbjct: 319  TLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALTDARCKLAELEG 378

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQRLCEG+G+          
Sbjct: 379  ALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVGS---------- 428

Query: 1381 XXXXXDLCVSGSR 1419
                 ++CVS SR
Sbjct: 429  ----VNVCVSSSR 437


>ref|XP_003085117.1| PREDICTED: keratin, type II cuticular Hb6 isoform 4 [Mus musculus].
          Length = 414

 Score =  600 bits (1548), Expect = e-172
 Identities = 303/403 (75%), Positives = 327/403 (81%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            CASACGPRPGRCCISAAPYRGISCYRGL+                              P
Sbjct: 12   CASACGPRPGRCCISAAPYRGISCYRGLSGGFGSQSVCGAFRSGSCGRSFGYRSGGICGP 71

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVK EEKEQIKCLN+RFAAFIDKVRFLEQQNKL
Sbjct: 72   SPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKCLNSRFAAFIDKVRFLEQQNKL 131

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETK QFYQNR+CCESN+EPLF GYIETLRREAE VEADSGRLA+ELNH QE +EGYKK+
Sbjct: 132  LETKWQFYQNRKCCESNMEPLFEGYIETLRREAECVEADSGRLAAELNHAQESMEGYKKR 191

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEAN EAL QE DFLRR+Y+EE R+L +H
Sbjct: 192  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETRILHSH 251

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSVIVK+DNSRDLNM+ +VAEIKAQYDDIASRSRAEAESWYR+KCEE+KATV+RHGE
Sbjct: 252  ISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIRHGE 311

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRT+EEINELNRMIQRLTAEIENAKCQN+KL              L D          
Sbjct: 312  TLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEG 371

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQR 1329
                   DMACL+KEYQEV+NSKLGLD+EI TYRRLLEGEEQR
Sbjct: 372  ALQKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQR 414


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 48,214,943
Number of extensions: 1277802
Number of successful extensions: 7640
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 7272
Number of HSP's successfully gapped: 85
Length of query: 591
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 484
Effective length of database: 12,403,707
Effective search space: 6003394188
Effective search space used: 6003394188
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012161
         (1774 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002272.2| keratin, type II cuticular Hb1 [Homo sapiens].       726   0.0  
Alignment   gi|NP_002273.3| keratin, type II cuticular Hb3 [Homo sapiens].       723   0.0  
Alignment   gi|NP_002275.1| keratin, type II cuticular Hb6 [Homo sapiens].       655   0.0  
Alignment   gi|NP_002274.1| keratin, type II cuticular Hb5 [Homo sapiens].       600   e-171
Alignment   gi|NP_149034.2| keratin, type II cuticular Hb4 [Homo sapiens].       432   e-121
Alignment   gi|NP_149022.3| keratin, type II cuticular Hb2 [Homo sapiens].       427   e-119
Alignment   gi|NP_000415.2| keratin, type II cytoskeletal 5 [Homo sapiens].      360   3e-99
Alignment   gi|NP_005545.1| keratin, type II cytoskeletal 6A [Homo sapiens].     355   1e-97
Alignment   gi|NP_775109.2| keratin, type II cytoskeletal 6C [Homo sapiens].     352   5e-97
Alignment   gi|NP_004684.2| keratin, type II cytoskeletal 75 [Homo sapiens].     352   6e-97

>ref|NP_002272.2| keratin, type II cuticular Hb1 [Homo sapiens].
          Length = 505

 Score =  726 bits (1875), Expect = 0.0
 Identities = 367/473 (77%), Positives = 389/473 (82%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRPGRCCI+AAPYRGISCYRGLT                              P
Sbjct: 14   CISACGPRPGRCCITAAPYRGISCYRGLTGGFGSHSVCGGFRAGSCGRSFGYRSGGVCGP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVKQEEKEQIK LN+RFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKSLNSRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNR+CC+SNLEPLF GYIETLRREAE VEADSGRLASELNHVQEVLEGYKKK
Sbjct: 134  LETKLQFYQNRECCQSNLEPLFEGYIETLRREAECVEADSGRLASELNHVQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKKDVDCAY+RKSDLEANVEAL+QEIDFLRRLYEEEI +LQ+H
Sbjct: 194  YEEEVSLRATAENEFVALKKDVDCAYLRKSDLEANVEALIQEIDFLRRLYEEEILILQSH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSV+VKLDNSRDLNM+ I+AEIKAQYDDI +RSRAEAESWYRSKCEE+KATV+RHGE
Sbjct: 254  ISDTSVVVKLDNSRDLNMDCIIAEIKAQYDDIVTRSRAEAESWYRSKCEEMKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNRMIQRLTAE+ENAKCQNSKL              L+D          
Sbjct: 314  TLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAALSDARCKLAELEG 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACLI+EYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEGIGA          
Sbjct: 374  ALQKAKQDMACLIREYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGIGAVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSCGLG 1539
                 DLCVSGSRPVTGSVCSAPC+GNVAVSTGLCAPCGQLNTTCGGGSCG+G
Sbjct: 434  GVVCGDLCVSGSRPVTGSVCSAPCNGNVAVSTGLCAPCGQLNTTCGGGSCGVG 486


>ref|NP_002273.3| keratin, type II cuticular Hb3 [Homo sapiens].
          Length = 493

 Score =  723 bits (1866), Expect = 0.0
 Identities = 366/475 (77%), Positives = 388/475 (81%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRP RCCI+AAPYRGISCYRGLT                              P
Sbjct: 19   CVSACGPRPSRCCITAAPYRGISCYRGLTGGFGSHSVCGGFRAGSCGRSFGYRSGGVCGP 78

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVKQEEKEQIK LN+RFAAFIDKVRFLEQQNKL
Sbjct: 79   SPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKSLNSRFAAFIDKVRFLEQQNKL 138

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNR+CC+SNLEPLF GYIETLRREAE VEADSGRLASELNHVQEVLEGYKKK
Sbjct: 139  LETKLQFYQNRECCQSNLEPLFAGYIETLRREAECVEADSGRLASELNHVQEVLEGYKKK 198

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEVALRATAENEFVALKKDVDCAY+RKSDLEANVEAL+QEIDFLRRLYEEEIR+LQ+H
Sbjct: 199  YEEEVALRATAENEFVALKKDVDCAYLRKSDLEANVEALIQEIDFLRRLYEEEIRILQSH 258

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSV+VKLDNSRDLNM+ IVAEIKAQYDDIA+RSRAEAESWYRSKCEE+KATV+RHGE
Sbjct: 259  ISDTSVVVKLDNSRDLNMDCIVAEIKAQYDDIATRSRAEAESWYRSKCEEMKATVIRHGE 318

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNRMIQRLTAE+ENAKCQNSKL              L+D          
Sbjct: 319  TLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAALSDARCKLAELEG 378

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACLI+EYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEG+ A          
Sbjct: 379  ALQKAKQDMACLIREYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVEAVNVCVSSSRG 438

Query: 1381 XXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGSCGLGRY 1545
                 DLCVSGSRPVTGSVCSAPC+GN+ VSTGLC PCGQLNTTCGGGSCG GR+
Sbjct: 439  GVVCGDLCVSGSRPVTGSVCSAPCNGNLVVSTGLCKPCGQLNTTCGGGSCGQGRH 493


>ref|NP_002275.1| keratin, type II cuticular Hb6 [Homo sapiens].
          Length = 486

 Score =  655 bits (1691), Expect = 0.0
 Identities = 341/472 (72%), Positives = 368/472 (77%), Gaps = 2/472 (0%)
 Frame = +1

Query: 121  CASACGPRPGRCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 300
            C SACGPRPGRCCI+AAPYRGISCYRGLT                              P
Sbjct: 14   CISACGPRPGRCCITAAPYRGISCYRGLTGGFGSHSVCGGFRAGSCGRSFGYRSGGVCGP 73

Query: 301  SPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKL 480
            SPPCITTVS+NE LLTPLNLEIDPNAQCVKQEEKEQIK LN+RFAAFIDKVRFLEQQNKL
Sbjct: 74   SPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKSLNSRFAAFIDKVRFLEQQNKL 133

Query: 481  LETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKK 660
            LETKLQFYQNR+CC+SNLEPLF GYIETLRREAE VEADSGRLASELNHVQEVLEGYKKK
Sbjct: 134  LETKLQFYQNRECCQSNLEPLFEGYIETLRREAECVEADSGRLASELNHVQEVLEGYKKK 193

Query: 661  YEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAH 840
            YEEEV+LRATAENEFVALKKDVDCAY+RKSDLEANVEAL+QEIDFLRRLYEEEIRVLQ+H
Sbjct: 194  YEEEVSLRATAENEFVALKKDVDCAYLRKSDLEANVEALIQEIDFLRRLYEEEIRVLQSH 253

Query: 841  ISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGE 1020
            ISDTSV+VKLDNSRDLNM+ I+AEIKAQYDDI +RSRAEAESWYRSKCEE+KATV+RHGE
Sbjct: 254  ISDTSVVVKLDNSRDLNMDCIIAEIKAQYDDIVTRSRAEAESWYRSKCEEMKATVIRHGE 313

Query: 1021 TLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXX 1200
            TLRRTKEEINELNRMIQRLTAE+ENAKCQNSKL              L+D          
Sbjct: 314  TLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEAALSDARCKLAELEG 373

Query: 1201 XXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXX 1380
                   DMACLI+EYQEV+NSKLGLDIEIATYRRLLEGEEQRLCEG+G+          
Sbjct: 374  ALQKAKQDMACLIREYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVGSVNVCVSSSRG 433

Query: 1381 XXXXXDLCVSGSRPVTGS-VCSAPCSGNVAV-STGLCAPCGQLNTTCGGGSC 1530
                 DLC S + PV  + V S P + NV V +T  CAP  ++     GGSC
Sbjct: 434  GVVCGDLCASTTAPVVSTRVSSVPSNSNVVVGTTNACAPSARVGVC--GGSC 483


>ref|NP_002274.1| keratin, type II cuticular Hb5 [Homo sapiens].
          Length = 507

 Score =  600 bits (1547), Expect = e-171
 Identities = 329/485 (67%), Positives = 356/485 (73%), Gaps = 13/485 (2%)
 Frame = +1

Query: 127  SACGPRPG-RCCISAAPYRGISCYRGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-- 297
            SA  P+ G RCCISAAPYRG+SCYRGLT                                
Sbjct: 22   SAVAPKTGNRCCISAAPYRGVSCYRGLTGFGSRSLCNLGSCGPRIAVGGFRAGSCGRSFG 81

Query: 298  --------PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKV 453
                    PSPPCITTVS+NE LLTPLNLEIDPNAQCVKQEEKEQIK LN+RFAAFIDKV
Sbjct: 82   YRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKSLNSRFAAFIDKV 141

Query: 454  RFLEQQNKLLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQ 633
            RFLEQQNKLLETK QFYQN++CCESNLEPLF+GYIETLRREAE VEADSGRLASELNHVQ
Sbjct: 142  RFLEQQNKLLETKWQFYQNQRCCESNLEPLFSGYIETLRREAECVEADSGRLASELNHVQ 201

Query: 634  EVLEGYKKKYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYE 813
            EVLEGYKKKYEEEVALRATAENEFV LKKDVDCAY+RKSDLEANVEALV+E  FLRRLYE
Sbjct: 202  EVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLRRLYE 261

Query: 814  EEIRVLQAHISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEI 993
            EEIRVLQAHISDTSVIVK+DNSRDLNM+ I+AEIKAQYDD+ASRSRAEAESWYRSKCEE+
Sbjct: 262  EEIRVLQAHISDTSVIVKMDNSRDLNMDCIIAEIKAQYDDVASRSRAEAESWYRSKCEEM 321

Query: 994  KATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDX 1173
            KATV+RHGETLRRTKEEINELNRMIQRLTAEIENAKCQ +KL              L+D 
Sbjct: 322  KATVIRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALSDA 381

Query: 1174 XXXXXXXXXXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAX 1353
                            DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEE RLCEG+G+ 
Sbjct: 382  RCKLAELEGALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEHRLCEGVGSV 441

Query: 1354 XXXXXXXXXXXXXXDLCVSGS--RPVTGSVCSAPCSGNVAVSTGLCAPCGQLNTTCGGGS 1527
                           L  S +  R +T S  SA       V+   CAPC   +++    S
Sbjct: 442  NVCVSSSRGGVSCGGLSYSTTPGRQIT-SGPSAIGGSITVVAPDSCAPCQPRSSSF---S 497

Query: 1528 CGLGR 1542
            CG  R
Sbjct: 498  CGSSR 502


>ref|NP_149034.2| keratin, type II cuticular Hb4 [Homo sapiens].
          Length = 600

 Score =  432 bits (1112), Expect = e-121
 Identities = 228/401 (56%), Positives = 287/401 (71%), Gaps = 1/401 (0%)
 Frame = +1

Query: 298  PSPPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNK 477
            P+ P IT V++N+ LLTPLNLEIDPNAQ VK++EKEQIK LNN+FA+FIDKVRFLEQQNK
Sbjct: 132  PAAPSITAVTVNKSLLTPLNLEIDPNAQRVKKDEKEQIKTLNNKFASFIDKVRFLEQQNK 191

Query: 478  LLETKLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            LLETK  F Q ++C  SNLEPLF  YI  LRR+ E++ +D  RL +E NH+Q+VLEG+KK
Sbjct: 192  LLETKWSFLQEQKCIRSNLEPLFESYITNLRRQLEVLVSDQARLQAERNHLQDVLEGFKK 251

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYEEEV  RA AENEFVALKKDVD A++ KSDLEANV+ L QEIDFL+ LY EEI++LQ+
Sbjct: 252  KYEEEVVCRANAENEFVALKKDVDAAFMNKSDLEANVDTLTQEIDFLKTLYMEEIQLLQS 311

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            HIS+TSVIVK+DNSRDLN++ I+AE+KAQY+++A RSRA+AE+WY++K EE++ T  +H 
Sbjct: 312  HISETSVIVKMDNSRDLNLDGIIAEVKAQYEEVARRSRADAEAWYQTKYEEMQVTAGQHC 371

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR  + EINEL R+IQRL AEIE+AK Q +KL              L+D         
Sbjct: 372  DNLRNIRNEINELTRLIQRLKAEIEHAKAQRAKLEAAVAEAEQQGEATLSDAKCKLADLE 431

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIG-AXXXXXXXX 1374
                    DMA  + EYQE++N+KLGLDIEIATYRRLLEGEE RLCEG+G          
Sbjct: 432  CALQQAKQDMARQLCEYQELMNAKLGLDIEIATYRRLLEGEESRLCEGVGPVNISVSSSR 491

Query: 1375 XXXXXXXDLCVSGSRPVTGSVCSAPCSGNVAVSTGLCAPCG 1497
                   +  V+GS    G V  +  S +V  ++G+ A CG
Sbjct: 492  GGLVCGPEPLVAGSTLSRGGVTFSG-SSSVCATSGVLASCG 531


>ref|NP_149022.3| keratin, type II cuticular Hb2 [Homo sapiens].
          Length = 513

 Score =  427 bits (1097), Expect = e-119
 Identities = 237/423 (56%), Positives = 285/423 (67%), Gaps = 12/423 (2%)
 Frame = +1

Query: 310  CITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLLET 489
            CIT V+INE LL PL LEIDP  Q VK++EKEQIKCLNNRFA+FI+KVRFLEQ+NKLLET
Sbjct: 91   CITPVTINESLLVPLALEIDPTVQRVKRDEKEQIKCLNNRFASFINKVRFLEQKNKLLET 150

Query: 490  KLQFYQNRQCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEE 669
            K  F Q ++CC++N+EP+F GYI  LRR+ + V  D  RL SEL  +Q  LEGYKKKYEE
Sbjct: 151  KWNFMQQQRCCQTNIEPIFEGYISALRRQLDCVSGDRVRLESELCSLQAALEGYKKKYEE 210

Query: 670  EVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQAHISD 849
            E++LR   ENEFVALKKDVD A++ K+DLE N EALVQEIDFL+ LYEEEI +LQ+ IS+
Sbjct: 211  ELSLRPCVENEFVALKKDVDTAFLMKADLETNAEALVQEIDFLKSLYEEEICLLQSQISE 270

Query: 850  TSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHGETLR 1029
            TSVIVK+DNSR+L+++ I+AEIKAQYDDIASRS+AEAE+WY+ + EE++ T   H + LR
Sbjct: 271  TSVIVKMDNSRELDVDGIIAEIKAQYDDIASRSKAEAEAWYQCRYEELRVTAGNHCDNLR 330

Query: 1030 RTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXXXXXX 1209
              K EI E+N++IQRL  E EN K Q  KL              LND             
Sbjct: 331  NRKNEILEMNKLIQRLQQETENVKAQRCKLEGAIAEAEQQGEAALNDAKCKLAGLEEALQ 390

Query: 1210 XXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLCEGIGAXXXXXXXXXXXXX 1389
                DMACL+KEYQEV+NSKLGLDIEIATYRRLLEGEE RLCEGIG              
Sbjct: 391  KAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEHRLCEGIG-------------- 436

Query: 1390 XXDLCVSGSRPVTGSVCSAPC-------SGNVAVSTGLCA--PCGQLNTTC---GGGSCG 1533
              ++ VS S+   G+    PC       S  V  S G C+    G+L   C   G  SCG
Sbjct: 437  PVNISVSSSK---GAFLYEPCGVSTPVLSTGVLRSNGGCSIVGTGELYVPCEPQGLLSCG 493

Query: 1534 LGR 1542
             GR
Sbjct: 494  SGR 496


>ref|NP_000415.2| keratin, type II cytoskeletal 5 [Homo sapiens].
          Length = 590

 Score =  360 bits (923), Expect = 3e-99
 Identities = 184/351 (52%), Positives = 252/351 (71%), Gaps = 3/351 (0%)
 Frame = +1

Query: 304  PPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLL 483
            P  I  V++N+ LLTPLNL+IDP+ Q V+ EE+EQIK LNN+FA+FIDKVRFLEQQNK+L
Sbjct: 137  PGGIQEVTVNQSLLTPLNLQIDPSIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVL 196

Query: 484  ETKLQFYQNR--QCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            +TK    Q +  +    NLEPLF  YI  LRR+ + +  + GRL SEL ++Q+++E +K 
Sbjct: 197  DTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRNMQDLVEDFKN 256

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYE+E+  R TAENEFV LKKDVD AY+ K +LEA V+AL+ EI+F++  ++ E+  +Q 
Sbjct: 257  KYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFMKMFFDAELSQMQT 316

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            H+SDTSV++ +DN+R+L++++I+AE+KAQY++IA+RSR EAESWY++K EE++ T  RHG
Sbjct: 317  HVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIANRSRTEAESWYQTKYEELQQTAGRHG 376

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR TK EI+E+NRMIQRL AEI+N K Q + L              L D         
Sbjct: 377  DDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELE 436

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLC-EGIG 1347
                    DMA L++EYQE++N+KL LD+EIATYR+LLEGEE RL  EG+G
Sbjct: 437  EALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVG 487


>ref|NP_005545.1| keratin, type II cytoskeletal 6A [Homo sapiens].
          Length = 564

 Score =  355 bits (910), Expect = 1e-97
 Identities = 185/351 (52%), Positives = 246/351 (70%), Gaps = 3/351 (0%)
 Frame = +1

Query: 304  PPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLL 483
            P  I  V++N+ LLTPLNL+IDP  Q V+ EE+EQIK LNN+FA+FIDKVRFLEQQNK+L
Sbjct: 132  PGGIQEVTVNQSLLTPLNLQIDPTIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQNKVL 191

Query: 484  ETKLQFYQNR--QCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            ETK    Q +  +    NLEPLF  YI  LRR+ + +  + GRL SEL  +Q+++E +K 
Sbjct: 192  ETKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRGMQDLVEDFKN 251

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYE+E+  R  AENEFV LKKDVD AY+ K +L+A  + L  EI+FLR LY+ E+  +Q 
Sbjct: 252  KYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKADTLTDEINFLRALYDAELSQMQT 311

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            HISDTSV++ +DN+R+L++++I+AE+KAQY++IA RSRAEAESWY++K EE++ T  RHG
Sbjct: 312  HISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQTKYEELQVTAGRHG 371

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR TK+EI E+NRMIQRL +EI++ K Q + L              L D         
Sbjct: 372  DDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALKDAKNKLEGLE 431

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRL-CEGIG 1347
                    D+A L+KEYQE++N KL LD+EIATYR+LLEGEE RL  EG+G
Sbjct: 432  DALQKAKQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLNGEGVG 482


>ref|NP_775109.2| keratin, type II cytoskeletal 6C [Homo sapiens].
          Length = 564

 Score =  352 bits (904), Expect = 5e-97
 Identities = 184/351 (52%), Positives = 246/351 (70%), Gaps = 3/351 (0%)
 Frame = +1

Query: 304  PPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLL 483
            P  I  V++N+ LLTPLNL+IDP  Q V+ EE+EQIK LNN+FA+FIDKVRFLEQQNK+L
Sbjct: 132  PGGIQEVTVNQSLLTPLNLQIDPAIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQNKVL 191

Query: 484  ETKLQFYQNR--QCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            +TK    Q +  +    NLEPLF  YI  LRR+ + +  + GRL SEL ++Q+++E  K 
Sbjct: 192  DTKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRNMQDLVEDLKN 251

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            KYE+E+  R  AENEFV LKKDVD AY+ K +L+A  + L  EI+FLR LY+ E+  +Q 
Sbjct: 252  KYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKADTLTDEINFLRALYDAELSQMQT 311

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
            HISDTSV++ +DN+R+L++++I+AE+KAQY++IA RSRAEAESWY++K EE++ T  RHG
Sbjct: 312  HISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQTKYEELQVTAGRHG 371

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR TK+EI E+NRMIQRL +EI++ K Q + L              L D         
Sbjct: 372  DDLRNTKQEIAEINRMIQRLRSEIDHVKKQCASLQAAIADAEQRGEMALKDAKNKLEGLE 431

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRL-CEGIG 1347
                    D+A L+KEYQE++N KL LD+EIATYR+LLEGEE RL  EG+G
Sbjct: 432  DALQKAKQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLNGEGVG 482


>ref|NP_004684.2| keratin, type II cytoskeletal 75 [Homo sapiens].
          Length = 551

 Score =  352 bits (903), Expect = 6e-97
 Identities = 197/417 (47%), Positives = 268/417 (64%), Gaps = 5/417 (1%)
 Frame = +1

Query: 304  PPCITTVSINECLLTPLNLEIDPNAQCVKQEEKEQIKCLNNRFAAFIDKVRFLEQQNKLL 483
            P  I  V++N+ LLTPL+L+IDP  Q V+ EE+EQIK LNN+FA+FIDKVRFLEQQNK+L
Sbjct: 118  PGGIQEVTVNQSLLTPLHLQIDPTIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQNKVL 177

Query: 484  ETKLQFYQNR--QCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKK 657
            ETK    Q +  +    NLEPLF+ Y   LRR+ E +  + GRL +EL ++Q+V+E +K 
Sbjct: 178  ETKWALLQEQGSRTVRQNLEPLFDSYTSELRRQLESITTERGRLEAELRNMQDVVEDFKV 237

Query: 658  KYEEEVALRATAENEFVALKKDVDCAYIRKSDLEANVEALVQEIDFLRRLYEEEIRVLQA 837
            +YE+E+  R  AENEFVALKKDVD AY+ K +LEA V++L +EI+F+  +++ E+  LQ 
Sbjct: 238  RYEDEINKRTAAENEFVALKKDVDAAYMNKVELEAKVKSLPEEINFIHSVFDAELSQLQT 297

Query: 838  HISDTSVIVKLDNSRDLNMNNIVAEIKAQYDDIASRSRAEAESWYRSKCEEIKATVVRHG 1017
             + DTSV++ +DN+R+L++++I+AE+KAQY+DIA+RSRAEAESWY++K EE++ T  RHG
Sbjct: 298  QVGDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQVTAGRHG 357

Query: 1018 ETLRRTKEEINELNRMIQRLTAEIENAKCQNSKLXXXXXXXXXXXXXXLNDXXXXXXXXX 1197
            + LR TK+EI+E+NRMIQRL AEI++ K Q S L              L D         
Sbjct: 358  DDLRNTKQEISEMNRMIQRLRAEIDSVKKQCSSLQTAIADAEQRGELALKDARAKLVDLE 417

Query: 1198 XXXXXXXXDMACLIKEYQEVLNSKLGLDIEIATYRRLLEGEEQRLC-EGIGAXXXXXXXX 1374
                    DMA L++EYQE++N KL LD+EIATYR+LLEGEE RL  EG+          
Sbjct: 418  EALQKAKQDMARLLREYQELMNIKLALDVEIATYRKLLEGEECRLSGEGVSPVNISV--- 474

Query: 1375 XXXXXXXDLCVSGSRPVTGSVCSAPCSGNV--AVSTGLCAPCGQLNTTCGGGSCGLG 1539
                            VT ++ S   SG+     + GL    G   TT GG S G G
Sbjct: 475  ----------------VTSTLSSGYGSGSSIGGGNLGLGGGSGYSFTTSGGHSLGAG 515


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 57,571,841
Number of extensions: 1561589
Number of successful extensions: 9145
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 8837
Number of HSP's successfully gapped: 84
Length of query: 591
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 483
Effective length of database: 14,737,052
Effective search space: 7117996116
Effective search space used: 7117996116
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012161
         (1774 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr05                                                         876   0.0  
Sscrofa_Chr12                                                          86   8e-14
Sscrofa_Chr10                                                          66   7e-08

>Sscrofa_Chr05 
||          Length = 111506441

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Plus

                                                                            
Query: 12       ttagctccgtcctctgccagcttctccactgttcagacacctccctgtctccagcatgac 71
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18073108 ttagctccgtcctctgccagcttctccactgttcagacacctccctgtctccagcatgac 18073167

                                                                            
Query: 72       ctgtggcttcagctccatgagctctggattcagcggccgtgctttcagctgcgcctcagc 131
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18073168 ctgtggcttcagctccatgagctctggattcagcggccgtgctttcagctgcgcctcagc 18073227

                                                                            
Query: 132      ctgcgggccccggcctggccgctgctgcatctcggccgccccctaccggggcatctcctg 191
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18073228 ctgcgggccccggcctggccgctgctgcatctcggccgccccctaccggggcatctcctg 18073287

                                                                            
Query: 192      ctaccgcggcctcaccgggggctttggcagccgcagcgtcggcggaggcttccgcgctgg 251
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18073288 ctaccgcggcctcaccgggggctttggcagccgcagcgtcggcggaggcttccgcgctgg 18073347

                                                                            
Query: 252      ctcctatggccgcagcttcgggtaccgctctggcggcgtggtccgtcccagcccgccctg 311
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18073348 ctcctatggccgcagcttcgggtaccgctctggcggcgtggtccgtcccagcccgccctg 18073407

                                                                            
Query: 312      catcaccaccgtgtccatcaacgagtgcctcctcacgcccctcaacctggagatcgaccc 371
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18073408 catcaccaccgtgtccatcaacgagtgcctcctcacgcccctcaacctggagatcgaccc 18073467

                                                                            
Query: 372      caacgcccagtgtgtgaagcaagaggagaaggagcagatcaagtgtctcaacaacaggtt 431
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18073468 caacgcccagtgtgtgaagcaagaggagaaggagcagatcaagtgtctcaacaacaggtt 18073527

                                      
Query: 432      cgccgccttcattgacaaggtg 453
                ||||||||||||||||||||||
Sbjct: 18073528 cgccgccttcattgacaaggtg 18073549



 Score =  821 bits (414), Expect = 0.0
 Identities = 414/414 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1361     gtgtcagcagctcccggggcggggtcgtgtgcggggacctctgcgtgtctggctcccggc 1420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18080297 gtgtcagcagctcccggggcggggtcgtgtgcggggacctctgcgtgtctggctcccggc 18080356

                                                                            
Query: 1421     ccgtgacgggcagcgtctgcagcgccccctgcagcgggaacgtggcagtgagcaccggct 1480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18080357 ccgtgacgggcagcgtctgcagcgccccctgcagcgggaacgtggcagtgagcaccggct 18080416

                                                                            
Query: 1481     tgtgtgcgccctgcggccagctcaacaccacctgcggaggggggtcctgcggcctgggga 1540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18080417 tgtgtgcgccctgcggccagctcaacaccacctgcggaggggggtcctgcggcctgggga 18080476

                                                                            
Query: 1541     ggtattaggccgcccccatccccggggagagccagagaggccccttcgatccaccagtcg 1600
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18080477 ggtattaggccgcccccatccccggggagagccagagaggccccttcgatccaccagtcg 18080536

                                                                            
Query: 1601     tgccacagcccccactgccagctgagaacagcggctccttggtagatttccacccgtgtt 1660
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18080537 tgccacagcccccactgccagctgagaacagcggctccttggtagatttccacccgtgtt 18080596

                                                                            
Query: 1661     tctgagaatacatcacggcatccttcgcatcagccactcctcagtgcttctggtcccact 1720
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18080597 tctgagaatacatcacggcatccttcgcatcagccactcctcagtgcttctggtcccact 18080656

                                                                      
Query: 1721     ggaacgggtgctgccggggaaaggacccctcccttcctgggtctccgcccctgg 1774
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18080657 ggaacgggtgctgccggggaaaggacccctcccttcctgggtctccgcccctgg 18080710



 Score =  660 bits (333), Expect = 0.0
 Identities = 351/357 (98%)
 Strand = Plus / Plus

                                                                            
Query: 97       ggattcagcggccgtgctttcagctgcgcctcagcctgcgggccccggcctggccgctgc 156
                ||||||||| ||||  | |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18107549 ggattcagcagccgcaccttcagctgcgcctcagcctgcgggccccggcccggccgctgc 18107608

                                                                            
Query: 157      tgcatctcggccgccccctaccggggcatctcctgctaccgcggcctcaccgggggcttt 216
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18107609 tgcatctcggccgccccctaccggggcatctcctgctaccgcggcctcaccgggggcttt 18107668

                                                                            
Query: 217      ggcagccgcagcgtcggcggaggcttccgcgctggctcctatggccgcagcttcgggtac 276
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18107669 ggcagccgcagcgtcggcggaggcttccgcgctggctcctatggccgcagcttcgggtac 18107728

                                                                            
Query: 277      cgctctggcggcgtggtccgtcccagcccgccctgcatcaccaccgtgtccatcaacgag 336
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18107729 cgctctggcggcgtggtccgtcccagcccgccctgcatcaccaccgtgtccatcaacgag 18107788

                                                                            
Query: 337      tgcctcctcacgcccctcaacctggagatcgaccccaacgcccagtgtgtgaagcaagag 396
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18107789 tgcctcctcacgcccctcaacctggagatcgaccccaacgcccagtgtgtgaagcaagag 18107848

                                                                         
Query: 397      gagaaggagcagatcaagtgtctcaacaacaggttcgccgccttcattgacaaggtg 453
                ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 18107849 gagaaggagcagatcaagtttctcaacaacaggttcgccgccttcattgacaaggtg 18107905



 Score =  632 bits (319), Expect = e-178
 Identities = 334/339 (98%)
 Strand = Plus / Plus

                                                                            
Query: 115      ttcagctgcgcctcagcctgcgggccccggcctggccgctgctgcatctcggccgccccc 174
                |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 18142956 ttcagctgcgcctcagcctgcgggccccggcccggccgctgctgcatctcggccgccccc 18143015

                                                                            
Query: 175      taccggggcatctcctgctaccgcggcctcaccgggggctttggcagccgcagcgtcggc 234
                |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 18143016 taccggggcatctcctgctaccgcggcctcaccgggggctttagcagccgcagcgtcggc 18143075

                                                                            
Query: 235      ggaggcttccgcgctggctcctatggccgcagcttcgggtaccgctctggcggcgtggtc 294
                |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 18143076 ggaggcttccgcgctggctccggtggccgcagcttcgggtaccgctctggcggcgtggtc 18143135

                                                                            
Query: 295      cgtcccagcccgccctgcatcaccaccgtgtccatcaacgagtgcctcctcacgcccctc 354
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18143136 cgtcccagcccgccctgcatcaccaccgtgtccatcaacgagtgcctcctcacgcccctc 18143195

                                                                            
Query: 355      aacctggagatcgaccccaacgcccagtgtgtgaagcaagaggagaaggagcagatcaag 414
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18143196 aacctggagatcgaccccaacgcccagtgtgtgaagcaagaggagaaggagcagatcaag 18143255

                                                       
Query: 415      tgtctcaacaacaggttcgccgccttcattgacaaggtg 453
                | |||||||||||||||||||||||||||||||||||||
Sbjct: 18143256 tttctcaacaacaggttcgccgccttcattgacaaggtg 18143294



 Score =  611 bits (308), Expect = e-172
 Identities = 338/348 (97%)
 Strand = Plus / Plus

                                                                            
Query: 106      ggccgtgctttcagctgcgcctcagcctgcgggccccggcctggccgctgctgcatctcg 165
                |||||| | ||||||||| |||| |||||||  || ||| | ||||||||||||||||||
Sbjct: 18152741 ggccgtaccttcagctgcacctctgcctgcgtacctcgggcaggccgctgctgcatctcg 18152800

                                                                            
Query: 166      gccgccccctaccggggcatctcctgctaccgcggcctcaccgggggctttggcagccgc 225
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18152801 gccgccccctaccggggcatctcctgctaccgcggcctcaccgggggctttggcagccgc 18152860

                                                                            
Query: 226      agcgtcggcggaggcttccgcgctggctcctatggccgcagcttcgggtaccgctctggc 285
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18152861 agcgtcggcggaggcttccgcgctggctcctatggccgcagcttcgggtaccgctctggc 18152920

                                                                            
Query: 286      ggcgtggtccgtcccagcccgccctgcatcaccaccgtgtccatcaacgagtgcctcctc 345
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18152921 ggcgtggtccgtcccagcccgccctgcatcaccaccgtgtccatcaacgagtgcctcctc 18152980

                                                                            
Query: 346      acgcccctcaacctggagatcgaccccaacgcccagtgtgtgaagcaagaggagaaggag 405
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18152981 acgcccctcaacctggagatcgaccccaacgcccagtgtgtgaagcaagaggagaaggag 18153040

                                                                
Query: 406      cagatcaagtgtctcaacaacaggttcgccgccttcattgacaaggtg 453
                |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 18153041 cagatcaagtttctcaacaacaggttcgccgccttcattgacaaggtg 18153088



 Score =  458 bits (231), Expect = e-126
 Identities = 312/339 (92%)
 Strand = Plus / Minus

                                                                            
Query: 115      ttcagctgcgcctcagcctgcgggccccggcctggccgctgctgcatctcggccgccccc 174
                ||||||||| ||||||| |  ||||||||||| ||||||||||||||| |||| ||||||
Sbjct: 18137206 ttcagctgcacctcagcttctgggccccggccgggccgctgctgcatcacggctgccccc 18137147

                                                                            
Query: 175      taccggggcatctcctgctaccgcggcctcaccgggggctttggcagccgcagcgtcggc 234
                ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 18137146 taccgaggcgtctcctgctaccgcggcctcactgggggctttggcagccgcagcgtcagc 18137087

                                                                            
Query: 235      ggaggcttccgcgctggctcctatggccgcagcttcgggtaccgctctggcggcgtggtc 294
                ||||||||| | |||||||||  |||||||||||||||||||||||| || |||||||||
Sbjct: 18137086 ggaggcttcggtgctggctccagtggccgcagcttcgggtaccgctcgggtggcgtggtc 18137027

                                                                            
Query: 295      cgtcccagcccgccctgcatcaccaccgtgtccatcaacgagtgcctcctcacgcccctc 354
                |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 18137026 cgtcccagcccgccctgcatcaccaccgtgtccatcaacgagagcctcctcgcgcccctc 18136967

                                                                            
Query: 355      aacctggagatcgaccccaacgcccagtgtgtgaagcaagaggagaaggagcagatcaag 414
                |||||||||||||||| ||| |||||||  ||||||||||||||||||||||||||||| 
Sbjct: 18136966 aacctggagatcgaccacaatgcccagtccgtgaagcaagaggagaaggagcagatcaaa 18136907

                                                       
Query: 415      tgtctcaacaacaggttcgccgccttcattgacaaggtg 453
                  |||||||| ||||||||||||||||||||||||||||
Sbjct: 18136906 attctcaacagcaggttcgccgccttcattgacaaggtg 18136868



 Score =  448 bits (226), Expect = e-123
 Identities = 226/226 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1104     ccagaactccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccct 1163
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18088277 ccagaactccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccct 18088218

                                                                            
Query: 1164     caacgatgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcagga 1223
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18088217 caacgatgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcagga 18088158

                                                                            
Query: 1224     catggcctgcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctggacat 1283
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18088157 catggcctgcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctggacat 18088098

                                                              
Query: 1284     cgagatcgccacctaccggcgcctgctggagggcgaggagcagagg 1329
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18088097 cgagatcgccacctaccggcgcctgctggagggcgaggagcagagg 18088052



 Score =  448 bits (226), Expect = e-123
 Identities = 226/226 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1104     ccagaactccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccct 1163
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18112829 ccagaactccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccct 18112888

                                                                            
Query: 1164     caacgatgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcagga 1223
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18112889 caacgatgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcagga 18112948

                                                                            
Query: 1224     catggcctgcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctggacat 1283
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18112949 catggcctgcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctggacat 18113008

                                                              
Query: 1284     cgagatcgccacctaccggcgcctgctggagggcgaggagcagagg 1329
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18113009 cgagatcgccacctaccggcgcctgctggagggcgaggagcagagg 18113054



 Score =  440 bits (222), Expect = e-120
 Identities = 225/226 (99%)
 Strand = Plus / Plus

                                                                            
Query: 1104     ccagaactccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccct 1163
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18078884 ccagaactccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccct 18078943

                                                                            
Query: 1164     caacgatgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcagga 1223
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18078944 caacgatgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcagga 18079003

                                                                            
Query: 1224     catggcctgcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctggacat 1283
                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 18079004 catggcctgcctgatcaaggagtaccaggaggtgctgaactccaagctgggtctggacat 18079063

                                                              
Query: 1284     cgagatcgccacctaccggcgcctgctggagggcgaggagcagagg 1329
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18079064 cgagatcgccacctaccggcgcctgctggagggcgaggagcagagg 18079109



 Score =  414 bits (209), Expect = e-113
 Identities = 212/213 (99%)
 Strand = Plus / Plus

                                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 508
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18108642 aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 18108701

                                                                            
Query: 509      accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 568
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18108702 accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 18108761

                                                                            
Query: 569      ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 628
                |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 18108762 ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctctgagctcaaccacg 18108821

                                                 
Query: 629      tgcaggaggtgctggagggctacaagaagaagt 661
                |||||||||||||||||||||||||||||||||
Sbjct: 18108822 tgcaggaggtgctggagggctacaagaagaagt 18108854



 Score =  406 bits (205), Expect = e-110
 Identities = 212/213 (99%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 508
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18075432 aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 18075491

                                                                            
Query: 509      accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 568
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18075492 accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 18075551

                                                                            
Query: 569      ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 628
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 18075552 ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctc-accacg 18075610

                                                 
Query: 629      tgcaggaggtgctggagggctacaagaagaagt 661
                |||||||||||||||||||||||||||||||||
Sbjct: 18075611 tgcaggaggtgctggagggctacaagaagaagt 18075643



 Score =  406 bits (205), Expect = e-110
 Identities = 211/213 (99%)
 Strand = Plus / Plus

                                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 508
                ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 18076021 aggtgcgcttcctggagcagcagacaaagctgctggagaccaagctgcagttctaccaga 18076080

                                                                            
Query: 509      accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 568
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18076081 accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 18076140

                                                                            
Query: 569      ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 628
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18076141 ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 18076200

                                                 
Query: 629      tgcaggaggtgctggagggctacaagaagaagt 661
                |||||||||||||||||||||||||||||||||
Sbjct: 18076201 tgcaggaggtgctggagggctacaagaagaagt 18076233



 Score =  406 bits (205), Expect = e-110
 Identities = 212/213 (99%), Gaps = 1/213 (0%)
 Strand = Plus / Plus

                                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 508
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18145514 aggtgcgcttc-tggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 18145572

                                                                            
Query: 509      accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 568
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18145573 accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 18145632

                                                                            
Query: 569      ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 628
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18145633 ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 18145692

                                                 
Query: 629      tgcaggaggtgctggagggctacaagaagaagt 661
                |||||||||||||||||||||||||||||||||
Sbjct: 18145693 tgcaggaggtgctggagggctacaagaagaagt 18145725



 Score =  369 bits (186), Expect = 4e-99
 Identities = 207/214 (96%)
 Strand = Plus / Plus

                                                                            
Query: 1112     ccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccctcaacgatg 1171
                |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 18033887 ccaaactggaggctgccgtggctgaagctgagcagcagggcgaggcggctctcaacgatg 18033946

                                                                            
Query: 1172     ccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcaggacatggcct 1231
                ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18033947 cccgctgcaagctggcggagctggaggccgccctgcagaaggccaagcaggacatggcct 18034006

                                                                            
Query: 1232     gcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcg 1291
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18034007 gcctggtcaaggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcg 18034066

                                                  
Query: 1292     ccacctaccggcgcctgctggagggcgaggagca 1325
                ||||||||||||||||||||||||||||||||||
Sbjct: 18034067 ccacctaccggcgcctgctggagggcgaggagca 18034100



 Score =  335 bits (169), Expect = 5e-89
 Identities = 202/213 (94%)
 Strand = Plus / Minus

                                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 508
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 18136239 aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttcttccaga 18136180

                                                                            
Query: 509      accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 568
                ||||| ||||||| ||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 18136179 accgcaagtgctgtgagagcaacctggagccactgttcaatggctacattgagacgctga 18136120

                                                                            
Query: 569      ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 628
                ||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 18136119 ggcgggaggccgagcgcgtggaggccgaccgtgggaggctggcctccgaactcaaccacg 18136060

                                                 
Query: 629      tgcaggaggtgctggagggctacaagaagaagt 661
                |||| ||||||||||||||||||||||||||||
Sbjct: 18136059 tgcacgaggtgctggagggctacaagaagaagt 18136027



 Score =  331 bits (167), Expect = 8e-88
 Identities = 167/167 (100%)
 Strand = Plus / Plus

                                                                            
Query: 815      aggagatccgcgttctccaagcccacatctcagacacctcggtcattgtcaagttggaca 874
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18078136 aggagatccgcgttctccaagcccacatctcagacacctcggtcattgtcaagttggaca 18078195

                                                                            
Query: 875      acagccgggacctgaacatgaataacatcgtggcggagatcaaggctcagtatgatgaca 934
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18078196 acagccgggacctgaacatgaataacatcgtggcggagatcaaggctcagtatgatgaca 18078255

                                                               
Query: 935      tcgccagccgcagccgggccgaggctgagagctggtaccgcagcaag 981
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18078256 tcgccagccgcagccgggccgaggctgagagctggtaccgcagcaag 18078302



 Score =  327 bits (165), Expect = 1e-86
 Identities = 201/213 (94%)
 Strand = Plus / Plus

                                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 508
                ||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 18030977 aggtgcgcttccttgagcagcagaacaagctgctggagaccaagtggcagttctaccaga 18031036

                                                                            
Query: 509      accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 568
                |||  |  ||||| ||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 18031037 accagcgctgctgtgagagcaacctggagcctctgttcaatggctacatcgagacactga 18031096

                                                                            
Query: 569      ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 628
                |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 18031097 ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctctgagctcaaccacg 18031156

                                                 
Query: 629      tgcaggaggtgctggagggctacaagaagaagt 661
                |||||||||||||||||||||||||||||||||
Sbjct: 18031157 tgcaggaggtgctggagggctacaagaagaagt 18031189



 Score =  313 bits (158), Expect = 2e-82
 Identities = 185/194 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1132     gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 1191
                ||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| | |
Sbjct: 18176705 gctgaggctgagcagcagggtgaggcggccctcaacgatgccaagtgcaagctggcaggg 18176764

                                                                            
Query: 1192     ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 1251
                |||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 18176765 ctggaggaggccctgcagaaggccaagcaggacatggcctgcctgctcaaggagtaccag 18176824

                                                                            
Query: 1252     gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 1311
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18176825 gaggtgatgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 18176884

                              
Query: 1312     gagggcgaggagca 1325
                ||||||||||||||
Sbjct: 18176885 gagggcgaggagca 18176898



 Score =  313 bits (158), Expect = 2e-82
 Identities = 185/194 (95%)
 Strand = Plus / Minus

                                                                            
Query: 1132     gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 1191
                ||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| | |
Sbjct: 18245151 gctgaggctgagcagcagggtgaggcggccctcaacgatgccaagtgcaagctggcaggg 18245092

                                                                            
Query: 1192     ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 1251
                |||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 18245091 ctggaggaggccctgcagaaggccaagcaggacatggcctgcctgctcaaggagtaccag 18245032

                                                                            
Query: 1252     gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 1311
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18245031 gaggtgatgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 18244972

                              
Query: 1312     gagggcgaggagca 1325
                ||||||||||||||
Sbjct: 18244971 gagggcgaggagca 18244958



 Score =  299 bits (151), Expect = 3e-78
 Identities = 163/167 (97%)
 Strand = Plus / Plus

                                                                            
Query: 815      aggagatccgcgttctccaagcccacatctcagacacctcggtcattgtcaagttggaca 874
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18112020 aggagatccgcgtcctccaagcccacatctcagacacctcggtcattgtcaagttggaca 18112079

                                                                            
Query: 875      acagccgggacctgaacatgaataacatcgtggcggagatcaaggctcagtatgatgaca 934
                |||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||
Sbjct: 18112080 acagccgggacctgaacatggataacatcgtggcggagatcaaggctcactacgatgaca 18112139

                                                               
Query: 935      tcgccagccgcagccgggccgaggctgagagctggtaccgcagcaag 981
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18112140 tcgccagccgcagccgggccgaggctgagagctggtaccgcagcaag 18112186



 Score =  272 bits (137), Expect = 6e-70
 Identities = 194/213 (91%)
 Strand = Plus / Minus

                                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaagctgcagttctaccaga 508
                ||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||
Sbjct: 18053452 aggtgcgcttccttgagcagcagaataagctgctggagaccaagtggcagttctaccaga 18053393

                                                                            
Query: 509      accgccagtgctgcgagagcaacctggagccgctcttcaatggctacatcgagacgctga 568
                ||||  | |||||| |||||| |||||||| ||| |||||||||||||| |||| ||| |
Sbjct: 18053392 accgaaaatgctgcaagagcagcctggagctgctgttcaatggctacattgagatgctaa 18053333

                                                                            
Query: 569      ggcgggaggccgagctcgtggaggccgacagcgggaggctggcctccgagctcaaccacg 628
                ||||||||||||||  ||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 18053332 ggcgggaggccgagtgcgtggaggctgatagcgggaggctggcctccgagctcaaccacg 18053273

                                                 
Query: 629      tgcaggaggtgctggagggctacaagaagaagt 661
                |||||||||||||||||||||||| ||||||||
Sbjct: 18053272 tgcaggaggtgctggagggctacaggaagaagt 18053240



 Score =  266 bits (134), Expect = 4e-68
 Identities = 203/226 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1104     ccagaactccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccct 1163
                |||||||||||||||||||||||| ||| |  | ||||||||||||||| ||| ||||||
Sbjct: 18133525 ccagaactccaagctggaggctgctgtgtcccaggctgagcagcagggccaggcggccct 18133466

                                                                            
Query: 1164     caacgatgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcagga 1223
                ||| ||||||   | ||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 18133465 caatgatgcccgctacaagctgactgagctggaggcggccctgcagaaggccaagcagga 18133406

                                                                            
Query: 1224     catggcctgcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctggacat 1283
                |||||||| |||| |||||||||||||||||||| |||  ||||||||||  ||||||||
Sbjct: 18133405 catggccttcctgctcaaggagtaccaggaggtgatgagttccaagctggctctggacat 18133346

                                                              
Query: 1284     cgagatcgccacctaccggcgcctgctggagggcgaggagcagagg 1329
                |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 18133345 cgagattgccacctaccggcgcctgctggagggcgaggagcagagg 18133300



 Score =  258 bits (130), Expect = 9e-66
 Identities = 136/138 (98%)
 Strand = Plus / Plus

                                                                            
Query: 1361     gtgtcagcagctcccggggcggggtcgtgtgcggggacctctgcgtgtctggctcccggc 1420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18113601 gtgtcagcagctcccggggcggggtcgtgtgcggggacctctgcgtgtctggctcccggc 18113660

                                                                            
Query: 1421     ccgtgacgggcagcgtctgcagcgccccctgcagcgggaacgtggcagtgagcaccggct 1480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 18113661 ccgtgacgggcagcgtctgcagcgccccctgcagcgggaacgtggcagtgagcaccggcc 18113720

                                  
Query: 1481     tgtgtgcgccctgcggcc 1498
                |||| |||||||||||||
Sbjct: 18113721 tgtgcgcgccctgcggcc 18113738



 Score =  254 bits (128), Expect = 1e-64
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                            
Query: 980      agtgtgaggagatcaaggccacggtggtccggcacggggagaccctgcgccgcaccaagg 1039
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18078516 agtgtgaggagatcaaggccacggtggtccggcacggggagaccctgcgccgcaccaagg 18078575

                                                                            
Query: 1040     aggagatcaacgagctgaaccgcatgatccagaggctgacggccgagatcgagaatgcca 1099
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18078576 aggagatcaacgagctgaaccgcatgatccagaggctgacggccgagatcgagaatgcca 18078635

                        
Query: 1100     agtgccag 1107
                ||||||||
Sbjct: 18078636 agtgccag 18078643



 Score =  254 bits (128), Expect = 1e-64
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                            
Query: 980      agtgtgaggagatcaaggccacggtggtccggcacggggagaccctgcgccgcaccaagg 1039
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18112461 agtgtgaggagatcaaggccacggtggtccggcacggggagaccctgcgccgcaccaagg 18112520

                                                                            
Query: 1040     aggagatcaacgagctgaaccgcatgatccagaggctgacggccgagatcgagaatgcca 1099
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18112521 aggagatcaacgagctgaaccgcatgatccagaggctgacggccgagatcgagaatgcca 18112580

                        
Query: 1100     agtgccag 1107
                ||||||||
Sbjct: 18112581 agtgccag 18112588



 Score =  252 bits (127), Expect = 6e-64
 Identities = 193/215 (89%)
 Strand = Plus / Plus

                                                                            
Query: 238      ggcttccgcgctggctcctatggccgcagcttcgggtaccgctctggcggcgtggtccgt 297
                ||||||||||||||||||  |||||||||||||||||||||||| || ||||||  | | 
Sbjct: 18029117 ggcttccgcgctggctccggtggccgcagcttcgggtaccgctccgggggcgtgtgcggc 18029176

                                                                            
Query: 298      cccagcccgccctgcatcaccaccgtgtccatcaacgagtgcctcctcacgcccctcaac 357
                |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 18029177 cccagcccgccctgcatcaccaccgtgtccgtcaatgagagcctcctcacgcccctcaac 18029236

                                                                            
Query: 358      ctggagatcgaccccaacgcccagtgtgtgaagcaagaggagaaggagcagatcaagtgt 417
                ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||   
Sbjct: 18029237 ctggagatcgaccccaatgcgcagtgcgtgaagcatgaggagaaggagcagatcaagaac 18029296

                                                   
Query: 418      ctcaacaacaggttcgccgccttcattgacaaggt 452
                ||||||| |||||| || |||||||| ||||||||
Sbjct: 18029297 ctcaacagcaggtttgctgccttcatcgacaaggt 18029331



 Score =  214 bits (108), Expect = 1e-52
 Identities = 123/128 (96%)
 Strand = Plus / Plus

                                                                            
Query: 980      agtgtgaggagatcaaggccacggtggtccggcacggggagaccctgcgccgcaccaagg 1039
                ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 18033348 agtgtgaggagatgaaggccacggtggtccggcacggggagaccctgcgccgcaccaaag 18033407

                                                                            
Query: 1040     aggagatcaacgagctgaaccgcatgatccagaggctgacggccgagatcgagaatgcca 1099
                |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 18033408 aggagatcaacgagctgaaccgcatgatccagaggctgacagccgagattgaaaatgcca 18033467

                        
Query: 1100     agtgccag 1107
                ||||||||
Sbjct: 18033468 agtgccag 18033475



 Score =  210 bits (106), Expect = 2e-51
 Identities = 151/166 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1113     caagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccctcaacgatgc 1172
                ||||||||||||   |||||| || || |||||||||||| |||  |||||||| |||||
Sbjct: 18047675 caagctggaggccaacgtggccgaggcagagcagcagggcaaggccgccctcaatgatgc 18047616

                                                                            
Query: 1173     caagtgcaagctggcggagctggaggccgccctgcagaaggccaagcaggacatggcctg 1232
                | | |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 18047615 ccactgcaagctggcggacctggaggccgccctgcagaaggccaggcaggacatggcctg 18047556

                                                              
Query: 1233     cctgatcaaggagtaccaggaggtgctgaactccaagctgggcctg 1278
                |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 18047555 cctggtcaaggagtaccaggaggtgctgaactccaagctgggcctg 18047510



 Score =  198 bits (100), Expect = 7e-48
 Identities = 142/156 (91%)
 Strand = Plus / Minus

                                                                            
Query: 298      cccagcccgccctgcatcaccaccgtgtccatcaacgagtgcctcctcacgcccctcaac 357
                ||||||||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||||
Sbjct: 18055332 cccagcccgccctacatcaccactgtgtccatcattgagggcctcctcacgcccctcaac 18055273

                                                                            
Query: 358      ctggagatcgaccccaacgcccagtgtgtgaagcaagaggagaaggagcagatcaagtgt 417
                ||||||||||||||||| || |||||||||||||| |||||||| ||||||| |||||||
Sbjct: 18055272 ctggagatcgaccccaaagcgcagtgtgtgaagcaggaggagaaagagcagaccaagtgt 18055213

                                                    
Query: 418      ctcaacaacaggttcgccgccttcattgacaaggtg 453
                ||||||||||||||||| || |||| |||| |||||
Sbjct: 18055212 ctcaacaacaggttcgctgctttcactgacgaggtg 18055177



 Score =  198 bits (100), Expect = 7e-48
 Identities = 118/124 (95%)
 Strand = Plus / Minus

                                                                            
Query: 984      tgaggagatcaaggccacggtggtccggcacggggagaccctgcgccgcaccaaggagga 1043
                |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 18133886 tgaggagatcaaggccacagtggtccagcacggggagaccctgcgccgcaccaaggagga 18133827

                                                                            
Query: 1044     gatcaacgagctgaaccgcatgatccagaggctgacggccgagatcgagaatgccaagtg 1103
                |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||| |
Sbjct: 18133826 gatcaatgagctgaaccgcgtgatccagaggctgacagccgagatcgagaatgccaagcg 18133767

                    
Query: 1104     ccag 1107
                ||||
Sbjct: 18133766 ccag 18133763



 Score =  196 bits (99), Expect = 3e-47
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                            
Query: 719      aggacgtggactgcgcctacatccgcaagtcagacctggaggccaacgtggaggccctgg 778
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18077469 aggacgtggactgcgcctacatccgcaagtcagacctggaggccaacgtggaggccctgg 18077528

                                                       
Query: 779      tccaggagatcgacttcctgcggcgactgtatgaggagg 817
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 18077529 tccaggagatcgacttcctgcggcgactgtatgaggagg 18077567



 Score =  188 bits (95), Expect = 7e-45
 Identities = 98/99 (98%)
 Strand = Plus / Plus

                                                                            
Query: 719      aggacgtggactgcgcctacatccgcaagtcagacctggaggccaacgtggaggccctgg 778
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 18111698 aggacgtggactgcgcctacgtccgcaagtcagacctggaggccaacgtggaggccctgg 18111757

                                                       
Query: 779      tccaggagatcgacttcctgcggcgactgtatgaggagg 817
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 18111758 tccaggagatcgacttcctgcggcgactgtatgaggagg 18111796



 Score =  157 bits (79), Expect = 3e-35
 Identities = 145/167 (86%)
 Strand = Plus / Minus

                                                                            
Query: 815      aggagatccgcgttctccaagcccacatctcagacacctcggtcattgtcaagttggaca 874
                |||||||| | || || ||||||||||||||||| || | ||||||||||||| ||||||
Sbjct: 18134320 aggagatcagagtccttcaagcccacatctcagatactttggtcattgtcaagatggaca 18134261

                                                                            
Query: 875      acagccgggacctgaacatgaataacatcgtggcggagatcaaggctcagtatgatgaca 934
                |||||||||||||||||||| |    ||| | || |||||||||||||| ||||||||||
Sbjct: 18134260 acagccgggacctgaacatggactctatcattgctgagatcaaggctcactatgatgaca 18134201

                                                               
Query: 935      tcgccagccgcagccgggccgaggctgagagctggtaccgcagcaag 981
                | |||||||| || ||||| |||||||||||||||||||||| ||||
Sbjct: 18134200 ttgccagccgtagtcgggctgaggctgagagctggtaccgcaccaag 18134154



 Score =  151 bits (76), Expect = 2e-33
 Identities = 178/212 (83%)
 Strand = Plus / Plus

                                                                            
Query: 1112     ccaagctggaggctgccgtggctgaagctgagcagcagggcgaggtggccctcaacgatg 1171
                |||||||||| || || |||||  | || |||||||||||||||| ||||||||| ||||
Sbjct: 18013594 ccaagctggaagccgcggtggcccaggcggagcagcagggcgaggcggccctcaatgatg 18013653

                                                                            
Query: 1172     ccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcaggacatggcct 1231
                ||||| |||||||||| || || |||| |||||| ||| |||||||||||||||||||  
Sbjct: 18013654 ccaagagcaagctggcagatctagagggcgcccttcagcaggccaagcaggacatggcgc 18013713

                                                                            
Query: 1232     gcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcg 1291
                ||| | |    |||||||||||| || ||||   |||| ||| |||||||||||||||||
Sbjct: 18013714 gccagctgcgtgagtaccaggagctgatgaatgtcaagttggccctggacatcgagatcg 18013773

                                                
Query: 1292     ccacctaccggcgcctgctggagggcgaggag 1323
                |||||||| |||||||||| || |||||||||
Sbjct: 18013774 ccacctacaggcgcctgctagaaggcgaggag 18013805



 Score =  151 bits (76), Expect = 2e-33
 Identities = 163/192 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1132     gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 1191
                ||||| ||||||||||  || ||| |||||||||| || |||| |  ||||||||| |||
Sbjct: 18369999 gctgatgctgagcagcgtggggagctggccctcaaggacgccaggaacaagctggccgag 18370058

                                                                            
Query: 1192     ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 1251
                |||||||  |||||||||||||||||||||||||||||| | ||| | | ||||||||||
Sbjct: 18370059 ctggaggatgccctgcagaaggccaagcaggacatggcccggctgctgagggagtaccag 18370118

                                                                            
Query: 1252     gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 1311
                ||| |  ||||| ||||||||| ||||||| | ||||||||||||||| ||   ||||||
Sbjct: 18370119 gagctcatgaacaccaagctggccctggacgtggagatcgccacctacaggaagctgctg 18370178

                            
Query: 1312     gagggcgaggag 1323
                ||||||||||||
Sbjct: 18370179 gagggcgaggag 18370190



 Score =  145 bits (73), Expect = 1e-31
 Identities = 133/153 (86%)
 Strand = Plus / Plus

                                                                            
Query: 829      ctccaagcccacatctcagacacctcggtcattgtcaagttggacaacagccgggacctg 888
                ||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 18032943 ctccatgcccacatctcagacacctccgtcatcgtcaagatggacaacagccgggacctg 18033002

                                                                            
Query: 889      aacatgaataacatcgtggcggagatcaaggctcagtatgatgacatcgccagccgcagc 948
                |||||||||    | || || ||||||||||||||||| || ||  | ||||||||||| 
Sbjct: 18033003 aacatgaattgtgttgtcgccgagatcaaggctcagtacgacgatgttgccagccgcagt 18033062

                                                 
Query: 949      cgggccgaggctgagagctggtaccgcagcaag 981
                ||||| |||||||||  ||||||||||||||||
Sbjct: 18033063 cgggctgaggctgagtcctggtaccgcagcaag 18033095



 Score =  143 bits (72), Expect = 4e-31
 Identities = 162/192 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1132     gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 1191
                ||||| || |||||||  || ||| |||||||||| || ||||||  ||||||||| |||
Sbjct: 18157233 gctgacgcagagcagcgtggggagctggccctcaaggacgccaagcacaagctggccgag 18157292

                                                                            
Query: 1192     ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 1251
                ||||||| ||||||||||||||||||||||||||||||  | | | |    |||||||||
Sbjct: 18157293 ctggaggacgccctgcagaaggccaagcaggacatggcgcgacagctgcgtgagtaccag 18157352

                                                                            
Query: 1252     gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 1311
                ||| || |||||  |||||||| |||||||||||||||||||||||||||    ||||||
Sbjct: 18157353 gagctgatgaacgtcaagctggccctggacatcgagatcgccacctaccgcaagctgctg 18157412

                            
Query: 1312     gagggcgaggag 1323
                ||||||||||||
Sbjct: 18157413 gagggcgaggag 18157424



 Score =  143 bits (72), Expect = 4e-31
 Identities = 162/192 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1132     gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 1191
                ||||| || |||||||  || ||| |||||||||| ||||||| |  ||||||||| |||
Sbjct: 18204596 gctgatgccgagcagcgtggggagatggccctcaaggatgccaggaacaagctggccgag 18204655

                                                                            
Query: 1192     ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 1251
                |||||||  |||||||||||||||||||||||||||||| | ||| | ||||||||||||
Sbjct: 18204656 ctggaggatgccctgcagaaggccaagcaggacatggccaggctgctgaaggagtaccag 18204715

                                                                            
Query: 1252     gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 1311
                ||| |  ||||| ||||||||| ||||||| | ||||| ||||||||| ||   ||||||
Sbjct: 18204716 gagctcatgaacaccaagctggccctggacgtggagattgccacctacaggaagctgctg 18204775

                            
Query: 1312     gagggcgaggag 1323
                || |||||||||
Sbjct: 18204776 gaaggcgaggag 18204787



 Score =  143 bits (72), Expect = 4e-31
 Identities = 162/192 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1132     gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 1191
                ||||| || |||||||  || ||| |||||||||| || ||||||  ||||||||| |||
Sbjct: 18263586 gctgacgcagagcagcgtggggagctggccctcaaggacgccaagcacaagctggccgag 18263527

                                                                            
Query: 1192     ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 1251
                ||||||| ||||||||||||||||||||||||||||||  | | | |    |||||||||
Sbjct: 18263526 ctggaggacgccctgcagaaggccaagcaggacatggcgcgacagctgcgtgagtaccag 18263467

                                                                            
Query: 1252     gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 1311
                ||| || |||||  |||||||| |||||||||||||||||||||||||||    ||||||
Sbjct: 18263466 gagctgatgaacgtcaagctggccctggacatcgagatcgccacctaccgcaagctgctg 18263407

                            
Query: 1312     gagggcgaggag 1323
                ||||||||||||
Sbjct: 18263406 gagggcgaggag 18263395



 Score =  133 bits (67), Expect = 4e-28
 Identities = 91/99 (91%)
 Strand = Plus / Plus

                                                                            
Query: 719      aggacgtggactgcgcctacatccgcaagtcagacctggaggccaacgtggaggccctgg 778
                |||| ||||||||||||||| | |  || |||||||||||||||||||||||||||||| 
Sbjct: 18147589 aggatgtggactgcgcctacgtgcagaaatcagacctggaggccaacgtggaggccctga 18147648

                                                       
Query: 779      tccaggagatcgacttcctgcggcgactgtatgaggagg 817
                 ||||||||||||||||||||||||||||||||||||||
Sbjct: 18147649 cccaggagatcgacttcctgcggcgactgtatgaggagg 18147687



 Score =  127 bits (64), Expect = 2e-26
 Identities = 160/192 (83%)
 Strand = Plus / Plus

                                                                            
Query: 1132     gctgaagctgagcagcagggcgaggtggccctcaacgatgccaagtgcaagctggcggag 1191
                ||||| || |||||||  || ||| |||||||||| ||||||| |  ||||||||| |||
Sbjct: 18186862 gctgatgccgagcagcgtggggagatggccctcaaggatgccaggaacaagctggccgag 18186921

                                                                            
Query: 1192     ctggaggccgccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccag 1251
                |||||||  |||||||  ||||||||||||||||||||| | ||| | ||||||||||||
Sbjct: 18186922 ctggaggatgccctgcttaaggccaagcaggacatggccaggctgctgaaggagtaccag 18186981

                                                                            
Query: 1252     gaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctg 1311
                ||| |  ||||| ||||||||| ||||||| | ||||| ||||||||| ||   ||||||
Sbjct: 18186982 gagctcatgaacgccaagctggccctggacgtggagattgccacctacaggaagctgctg 18187041

                            
Query: 1312     gagggcgaggag 1323
                || |||||||||
Sbjct: 18187042 gaaggcgaggag 18187053



 Score =  123 bits (62), Expect = 4e-25
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                            
Query: 660      gtatgaagaagaagtggcacttcgagctactgcggagaatgagtttgtggctctaaagaa 719
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18077290 gtatgaagaagaagtggcacttcgagctactgcggagaatgagtttgtggctctaaagaa 18077349

                  
Query: 720      gg 721
                ||
Sbjct: 18077350 gg 18077351



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                            
Query: 815      aggagatccgcgttctccaagcccacatctcagacacctcggtcattgtcaagttggaca 874
                ||||| |||| || ||||| || ||||||||||||||||| ||||| |||||| ||||||
Sbjct: 18148166 aggagctccgagtcctccacgctcacatctcagacacctccgtcatcgtcaagatggaca 18148225

                                                         
Query: 875      acagccgggacctgaacatgaataacatcgtggcggagatc 915
                |||||||||||||| ||||||| ||||| || || ||||||
Sbjct: 18148226 acagccgggacctggacatgaacaacattgtcgccgagatc 18148266



 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                            
Query: 719      aggacgtggactgcgcctacatccgcaagtcagacctggaggccaacgtggaggccctgg 778
                |||| ||||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 18031906 aggatgtggactgcgcctacctgcggaagtcagacctggaggccaacgtggaggccctgg 18031965

                 
Query: 779      t 779
                |
Sbjct: 18031966 t 18031966



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1243     gagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccgg 1302
                |||||||||||| | || |||  |||| ||| ||||||||||||||||||||||||||||
Sbjct: 15694018 gagtaccaggagctcctcaacgtcaagatggccctggacatcgagatcgccacctaccgg 15694077

                                     
Query: 1303     cgcctgctggagggcgaggag 1323
                   ||||||||||||||||||
Sbjct: 15694078 aagctgctggagggcgaggag 15694098



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 101/121 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1179     caagctggcggagctggaggccgccctgcagaaggccaagcaggacatggcctgcctgat 1238
                |||||||| ||| |||||||  |||||||||||||||||||||||||||||  | ||| |
Sbjct: 18100110 caagctggtggacctggaggatgccctgcagaaggccaagcaggacatggcacggctgct 18100051

                                                                            
Query: 1239     caaggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcgccaccta 1298
                  | |||||||||||| |  |||||  ||||||||  |||||| | ||||||||||||||
Sbjct: 18100050 gcacgagtaccaggagctcatgaacatcaagctggctctggacgtggagatcgccaccta 18099991

                 
Query: 1299     c 1299
                |
Sbjct: 18099990 c 18099990



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 101/121 (83%)
 Strand = Plus / Minus

                                                                            
Query: 1179     caagctggcggagctggaggccgccctgcagaaggccaagcaggacatggcctgcctgat 1238
                |||||||| ||| |||||||  |||||||||||||||||||||||||||||  | ||| |
Sbjct: 18279080 caagctggtggacctggaggatgccctgcagaaggccaagcaggacatggcacggctgct 18279021

                                                                            
Query: 1239     caaggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcgccaccta 1298
                  | |||||||||||| |  |||||  ||||||||  |||||| | ||||||||||||||
Sbjct: 18279020 gcacgagtaccaggagctcatgaacatcaagctggctctggacgtggagatcgccaccta 18278961

                 
Query: 1299     c 1299
                |
Sbjct: 18278960 c 18278960



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                            
Query: 1201     gccctgcagaaggccaagcaggacatggcctgcctgatcaaggagtaccaggaggtgctg 1260
                ||||||||| | |||||| ||||| ||||| | ||| | ||||||||||||||| || ||
Sbjct: 18542495 gccctgcagcaagccaaggaggacctggcccggctgctgaaggagtaccaggagttgatg 18542436

                                                                            
Query: 1261     aactccaagctgggcctggacatcgagatcgccacctaccggcgcctgctggagggcgag 1320
                ||   |||||||| ||||||| | ||||||||||||||| ||  ||| ||||| ||||||
Sbjct: 18542435 aatgtcaagctggccctggacgttgagatcgccacctacaggaccctcctggaaggcgag 18542376

                   
Query: 1321     gag 1323
                |||
Sbjct: 18542375 gag 18542373



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1267     aagctgggcctggacatcgagatcgccacctaccggcgcctgctggagggcgaggag 1323
                ||||||| |||||||||||||||||||||||||||    ||||||||||||||||||
Sbjct: 18442946 aagctggccctggacatcgagatcgccacctaccgcaagctgctggagggcgaggag 18442890



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                            
Query: 979      aagtgtgaggagatcaaggccacggtggtccggcacggggagaccctgcgccgcaccaag 1038
                ||||| ||| || ||||||||||||||   | ||| || ||||||||  || | ||||||
Sbjct: 18049175 aagtgcgagcagttcaaggccacggtgacacagcagggcgagaccctctgcaggaccaag 18049116

                                                                
Query: 1039     gaggagatcaacgagctgaaccgcatgatccagaggctgacggccgag 1086
                ||||| ||||| ||||||| |||  |||||||||||||||||||||||
Sbjct: 18049115 gaggacatcaaggagctgacccgtgtgatccagaggctgacggccgag 18049068



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                    
Query: 1327     aggctatgtgaaggcattggagctgtgaatgtctgt 1362
                ||||||||||||||||||||||||||||||||||||
Sbjct: 18079790 aggctatgtgaaggcattggagctgtgaatgtctgt 18079825



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 90/108 (83%)
 Strand = Plus / Plus

                                                                            
Query: 841      atctcagacacctcggtcattgtcaagttggacaacagccgggacctgaacatgaataac 900
                |||||||| ||||||||||| || ||| ||||||| |||||||| ||| || || ||  |
Sbjct: 18171443 atctcagagacctcggtcatcgtgaagatggacaatagccgggagctggacgtggatggc 18171502

                                                                
Query: 901      atcgtggcggagatcaaggctcagtatgatgacatcgccagccgcagc 948
                ||| | || ||||||||||| ||||| || || |||||||||||||||
Sbjct: 18171503 atcattgccgagatcaaggcccagtacgacgaaatcgccagccgcagc 18171550



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                            
Query: 841      atctcagacacctcggtcattgtcaagttggacaacagccgggacctgaacatgaataac 900
                |||||||| ||||||||||| || ||| ||||||| |||||||| ||| || || ||  |
Sbjct: 18250405 atctcagagacctcggtcatcgtgaagatggacaatagccgggagctggacgtggatggc 18250346

                                                                
Query: 901      atcgtggcggagatcaaggctcagtatgatgacatcgccagccgcagc 948
                ||| | || ||||||||||| ||||| || || |||||||||||||||
Sbjct: 18250345 atcattgccgagatcaaggcccagtacgacgaaatcgccagccgcagc 18250298



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                    
Query: 922      cagtatgatgacatcgccagccgcagccgggccgaggctgagagctggtacc 973
                |||||||| |||||||||| ||||||||||||||||||||||  ||||||||
Sbjct: 18281803 cagtatgaggacatcgccaaccgcagccgggccgaggctgagtcctggtacc 18281752



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1042     gagatcaacgagctgaaccgcatgatccagaggctgacggccgagatcgagaatgccaag 1101
                |||||||| |||||||||||| |||||||||||||||  || ||||||||| | ||||||
Sbjct: 18013021 gagatcaatgagctgaaccgcctgatccagaggctgaatgcagagatcgagcacgccaag 18013080



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 402      ggagcagatcaagtgtctcaacaacaggttcgccgccttcattgacaaggtg 453
                |||||||||||||  ||||||||||| ||||||| ||||||| |||||||||
Sbjct: 18092919 ggagcagatcaagactctcaacaacaagttcgcctccttcatcgacaaggtg 18092868



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 402      ggagcagatcaagtgtctcaacaacaggttcgccgccttcattgacaaggtg 453
                |||||||||||||  ||||||||||| ||||||| ||||||| |||||||||
Sbjct: 18272244 ggagcagatcaagactctcaacaacaagttcgcctccttcatcgacaaggtg 18272193



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaag 492
                ||||||| ||||||||||||||||||||| | ||||||||||||
Sbjct: 18284656 aggtgcggttcctggagcagcagaacaaggttctggagaccaag 18284613



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaag 492
                ||||||| |||||||||||||||||| || ||||||||||||||
Sbjct: 18395118 aggtgcggttcctggagcagcagaaccaggtgctggagaccaag 18395075



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaag 492
                ||||||| |||||||||||||||||| || ||||||||||||||
Sbjct: 18449183 aggtgcggttcctggagcagcagaaccaggtgctggagaccaag 18449140



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                            
Query: 1159     gccctcaacgatgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaag 1218
                |||||||| |||||| ||  |||||||   ||||||||||  ||||||||||||||||||
Sbjct: 18507792 gccctcaaagatgcccagaacaagctgaatgagctggaggaggccctgcagaaggccaag 18507733

                                                                            
Query: 1219     caggacatggcctgcctgatcaaggagtaccaggaggtgctgaactccaagctgggcctg 1278
                 ||||| ||||| ||||| |    || ||||||||  || ||||| |||| |||| ||||
Sbjct: 18507732 gaggacctggcccgcctgctgcgtgactaccaggaactgatgaacaccaaactggccctg 18507673

                                    
Query: 1279     gacatcgagatcgccaccta 1298
                ||| | ||||| ||||||||
Sbjct: 18507672 gacgtggagattgccaccta 18507653



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 449      aggtgcgcttcctggagcagcagaacaagctgctggagaccaag 492
                ||||||| ||||||||||||||||| ||| ||||||||||||||
Sbjct: 18610813 aggtgcggttcctggagcagcagaataaggtgctggagaccaag 18610770



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1243     gagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcgccacctaccgg 1302
                |||||||||||| || ||| ||  ||||||| ||||||  | ||||||||||||||||| 
Sbjct: 18618901 gagtaccaggagctgatgagcttgaagctggccctggatgtggagatcgccacctaccgc 18618842

                                    
Query: 1303     cgcctgctggagggcgagga 1322
                 | |||||||||||||||||
Sbjct: 18618841 aggctgctggagggcgagga 18618822



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 166/208 (79%), Gaps = 2/208 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1117     ctggaggctgccgtggctgaagctgagcagcagggcgaggtggccctcaacgatgccaag 1176
                |||||||||||| | ||||| || |||||||  || ||| ||||  |||| |||||  ||
Sbjct: 18664403 ctggaggctgccattgctgatgccgagcagcgtggggagctggctgtcaaggatgctcag 18664344

                                                                            
Query: 1177     tgcaagctggcggagctggaggccgccctgcagaa-ggccaagcaggacatggcctgcct 1235
                  ||||||||| |||||||||||||||||| ||||  |||||||||||||||||  | | 
Sbjct: 18664343 gccaagctggccgagctggaggccgccctg-agaaccgccaagcaggacatggcgcggca 18664285

                                                                            
Query: 1236     gatcaaggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcgccac 1295
                | |    |||||||||||  || ||||   |||||||| ||||||| | |||||||||||
Sbjct: 18664284 gctgcgtgagtaccaggaactgatgaatgtcaagctggccctggacgtggagatcgccac 18664225

                                            
Query: 1296     ctaccggcgcctgctggagggcgaggag 1323
                ||||||    ||||||||||| ||||||
Sbjct: 18664224 ctaccgcaagctgctggagggagaggag 18664197



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 727      gactgcgcctacatccgcaagtcagacctggaggccaacgtggaggc 773
                |||||||||||| | |||||| | |||||||||||||||||||||||
Sbjct: 18050855 gactgcgcctacctgcgcaaggctgacctggaggccaacgtggaggc 18050809



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 1170     tgccaagtgcaagctggcggagctggaggccgccctgcagaaggccaagcaggacatgg 1228
                ||||||| ||||||||||   ||||||||||||| |||||  |||||||||||||||||
Sbjct: 18124104 tgccaagagcaagctggcctggctggaggccgccttgcagcgggccaagcaggacatgg 18124046



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 914      tcaaggctcagtatgatgacatcgccagccgcagccgggccgaggctgaga 964
                ||||||| ||||| || || ||||||| |||||||||||||||||||||||
Sbjct: 18665439 tcaaggcccagtacgaggagatcgccaaccgcagccgggccgaggctgaga 18665389



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 395      aggagaaggagcagatcaagtgtctcaacaacaggttcgccgccttcattgacaaggtg 453
                ||||||||||||||||||||  ||||||||| | ||| ||| ||||||| |||||||||
Sbjct: 18670839 aggagaaggagcagatcaagactctcaacaataagtttgcctccttcatcgacaaggtg 18670781


>Sscrofa_Chr12 
||          Length = 63588571

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1241     aggagtaccaggaggtgctgaactccaagctgggcctggacatcgagatcgccacctacc 1300
                |||||||||||||| |||| |||   ||||||| ||||||||||||||||||||||||| 
Sbjct: 18705892 aggagtaccaggagctgctcaacgttaagctggccctggacatcgagatcgccacctaca 18705951

                                       
Query: 1301     ggcgcctgctggagggcgaggag 1323
                ||   ||||||||||||||||||
Sbjct: 18705952 ggaagctgctggagggcgaggag 18705974



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                      
Query: 1285     gagatcgccacctaccggcgcctgctggagggcgagga 1322
                ||||||||||||||||| ||||||||||||||||||||
Sbjct: 21256670 gagatcgccacctaccgccgcctgctggagggcgagga 21256633



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 1285     gagatcgccacctaccggcgcctgctggagggcgagga 1322
                ||||||||||||||||| ||||||||||||||||||||
Sbjct: 21322509 gagatcgccacctaccgccgcctgctggagggcgagga 21322546



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 1285     gagatcgccacctaccggcgcctgctggagggcgagga 1322
                ||||||||||||||||| ||||||||||||||||||||
Sbjct: 21330262 gagatcgccacctaccgccgcctgctggagggcgagga 21330299



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 1285     gagatcgccacctaccggcgcctgctggagggcgagga 1322
                ||||||||||||||||| ||||||||||||||||||||
Sbjct: 21342954 gagatcgccacctaccgccgcctgctggagggcgagga 21342991



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 1285     gagatcgccacctaccggcgcctgctggagggcgagga 1322
                ||||||||||||||||| ||||||||||||||||||||
Sbjct: 21499762 gagatcgccacctaccgccgcctgctggagggcgagga 21499799


>Sscrofa_Chr10 
||          Length = 79102373

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                                 
Query: 445      gacaaggtgcgcttcctggagcagcagaacaag 477
                |||||||||||||||||||||||||||||||||
Sbjct: 48227503 gacaaggtgcgcttcctggagcagcagaacaag 48227535


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 40,039,907
Number of extensions: 408
Number of successful extensions: 408
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 402
Number of HSP's successfully gapped: 80
Length of query: 1774
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1752
Effective length of database: 2,808,408,574
Effective search space: 4920331821648
Effective search space used: 4920331821648
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)