Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012230
(1236 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_786995.2| follistatin precursor [Bos taurus]. 541 e-158
Alignment gi|NP_001069178.1| follistatin-related protein 3 precursor [Bos... 231 1e-60
Alignment gi|XP_002694239.1| PREDICTED: neurexin 2-like [Bos taurus]. 96 7e-20
Alignment gi|XP_604151.4| PREDICTED: neurexin 2-like [Bos taurus]. 96 7e-20
Alignment gi|NP_001017950.1| follistatin-related protein 1 precursor [Bos... 73 5e-13
Alignment gi|XP_001254149.2| PREDICTED: follistatin-like 1, partial [Bos ... 73 5e-13
Alignment gi|XP_002689913.1| PREDICTED: tomoregulin-1-like [Bos taurus]. 69 9e-12
Alignment gi|NP_001192405.1| tomoregulin-1 [Bos taurus]. 69 1e-11
Alignment gi|NP_001069569.1| tomoregulin-2 precursor [Bos taurus]. 69 1e-11
Alignment gi|XP_618573.4| PREDICTED: low density lipoprotein receptor-rel... 55 2e-07
>ref|NP_786995.2| follistatin precursor [Bos taurus].
Length = 344
Score = 541 bits (1395), Expect(2) = e-158
Identities = 243/257 (94%), Positives = 247/257 (96%)
Frame = +1
Query: 424 KHQPGGXXXXXXXXXQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 603
+HQPGG QFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS
Sbjct: 5 RHQPGGLCLLLLLLCQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 64
Query: 604 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 783
WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN
Sbjct: 65 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 124
Query: 784 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT 963
ITWKGPVCGLDGKTYRNECALLKARCKEQPEL+VQYQGKCKKTCRDVFCPGSSTCVVDQT
Sbjct: 125 ITWKGPVCGLDGKTYRNECALLKARCKEQPELQVQYQGKCKKTCRDVFCPGSSTCVVDQT 184
Query: 964 NNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS 1143
NNAYCVTCNRICPEPTSSEQYLCGNDGVTY SACHLRKATCLLGRSIGLAYEGKCIKAKS
Sbjct: 185 NNAYCVTCNRICPEPTSSEQYLCGNDGVTYPSACHLRKATCLLGRSIGLAYEGKCIKAKS 244
Query: 1144 CEDIQCTGGKKCLWDFR 1194
C+DIQCTGGKKCLWDF+
Sbjct: 245 CDDIQCTGGKKCLWDFK 261
Score = 36.2 bits (82), Expect(2) = e-158
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3
Query: 1170 KKVLMGFQXXRGRCSLCDELCP 1235
KK L F+ RGRCSLC ELCP
Sbjct: 254 KKCLWDFKVGRGRCSLCGELCP 275
Score = 99.0 bits (245), Expect = 8e-21
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Frame = +1
Query: 682 CKETCENVDCGPGKKCRMNKKNKPRCV-CAPDCSNITWKGP-VCGLDGKTYRNECALLKA 855
CK+TC +V C C +++ N CV C C T +CG DG TY + C L KA
Sbjct: 164 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYPSACHLRKA 223
Query: 856 RCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVD-QTNNAYCVTCNRICPEPTSSEQY 1026
C + + Y+GKC K+C D+ C G C+ D + C C +CPE + SE+
Sbjct: 224 TCLLGRSIGLAYEGKCIKAKSCDDIQCTGGKKCLWDFKVGRGRCSLCGELCPE-SKSEEP 282
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
+C +D TY+S C +++A C G + + + G C
Sbjct: 283 VCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316
Score = 59.3 bits (142), Expect = 7e-09
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 673 CIPCKETCENVDCGPGKKCRMN-KKNKPRC-VCAPDCSNITWKGPVCGLDGKTYRNECAL 846
CI K +C+++ C GKKC + K + RC +C C + PVC D TY +ECA+
Sbjct: 239 CIKAK-SCDDIQCTGGKKCLWDFKVGRGRCSLCGELCPESKSEEPVCASDNATYASECAM 297
Query: 847 LKARCKEQPELEVQYQGKCKKTCRD 921
+A C LEV++ G C D
Sbjct: 298 KEAACSSGVLLEVKHSGSCNSISED 322
>ref|NP_001069178.1| follistatin-related protein 3 precursor [Bos taurus].
Length = 261
Score = 231 bits (589), Expect = 1e-60
Identities = 103/214 (48%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
Frame = +1
Query: 490 AQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAP 669
A G CWL+Q + C ++ KT++S+ ECC++G + T+W+ N + ++ G
Sbjct: 33 APGGVCWLQQGREATCSLVLKTDVSQAECCASGNIDTAWSNFTHPGNKIS--LLGFLGLV 90
Query: 670 NCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALL 849
+C+PCK++CE V+CGPGK CRM +PRC CAPDC+ + + VCG DG TYR+EC L
Sbjct: 91 HCLPCKDSCEGVECGPGKACRM-LGGRPRCECAPDCTGLPARLQVCGSDGATYRDECELR 149
Query: 850 KARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPTSSEQY 1026
ARC+ P+L V Y+G+C+K+C V C +CVVDQT +A+CV C CP P+S Q
Sbjct: 150 AARCRGHPDLRVMYRGRCRKSCAHVVCLRPQSCVVDQTGSAHCVVCRAAPCPAPSSPGQE 209
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
LCGN+ VTY S+CHLR+ATC LGRSIG+ + G C
Sbjct: 210 LCGNNNVTYLSSCHLRQATCFLGRSIGVRHPGSC 243
Score = 49.7 bits (117), Expect = 5e-06
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = +1
Query: 901 CKKTCRDVFC-PGSSTCVVDQTNNAYCVTCNRICPEPTS--SEQYLCGNDGVTYSSACHL 1071
CK +C V C PG + ++ C P+ T + +CG+DG TY C L
Sbjct: 95 CKDSCEGVECGPGKACRMLGGRPRCECA------PDCTGLPARLQVCGSDGATYRDECEL 148
Query: 1072 RKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWD-FRXAEAVVPSAMSC 1230
R A C + + Y G+C KSC + C + C+ D A VV A C
Sbjct: 149 RAARCRGHPDLRVMYRGRC--RKSCAHVVCLRPQSCVVDQTGSAHCVVCRAAPC 200
>ref|XP_002694239.1| PREDICTED: neurexin 2-like [Bos taurus].
Length = 2043
Score = 95.9 bits (237), Expect = 7e-20
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Frame = +1
Query: 682 CKETCE-NVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR 858
C E C N C ++++ +PRC C + ++ PVC DG TY N+C +A
Sbjct: 397 CPEPCRFNAVC-------LSRRGRPRCSCDRVVCDGAYR-PVCAHDGHTYDNDCWRQQAE 448
Query: 859 CKEQPELEVQYQGKCKKT---CRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSE-QY 1026
C++Q + +++QG C ++ CR V CP + C V + A C CP+ S
Sbjct: 449 CQQQRSIPMKHQGPCDQSPSPCRGVQCPFGAMCAV-KNGEAECA-----CPKACSGVYDP 502
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSC 1146
+CG+DG+TY SAC L C LGR I +A G C + C
Sbjct: 503 VCGSDGITYGSACELEATACALGREIRVARRGPCDRCGQC 542
Score = 90.5 bits (223), Expect = 3e-18
Identities = 57/158 (36%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Frame = +1
Query: 709 CGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQ 888
CG + + + RCVC +C + PVCG DG+TY +EC L C Q L V
Sbjct: 539 CGQCRFGALCEAETGRCVCPSEC--VASAQPVCGSDGRTYASECELHVHACTHQISLHVA 596
Query: 889 YQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACH 1068
G C+ TC D C + C Q C C R P P +CG+DGVTY S+C
Sbjct: 597 SAGPCQ-TCGDTVCAFGAVCSAGQ---CVCPRCERPPPGP------VCGSDGVTYGSSCE 646
Query: 1069 LRKATCLLGRSIGLAYEGKCIKAK-------SCEDIQC 1161
LR+A C I A+ G C +A+ S ED +C
Sbjct: 647 LREAACQQQTQIEEAWAGPCEQAECGSGGSGSGEDGEC 684
Score = 82.0 bits (201), Expect = 1e-15
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Frame = +1
Query: 688 ETCENVDCGPGKKCR--MNKKNKPRCVCAPD-CSNITWKGPVCGLDGKTYRNECALLKAR 858
+ C + CG G C ++ + CVC C ++ PVCG D TY NEC L +A+
Sbjct: 172 DACRGMLCGFGAVCEPSADEPGRASCVCKKSSCPSVV--APVCGSDASTYSNECELQRAQ 229
Query: 859 CKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPT--SSEQY 1026
C +Q + + +G C + C +V C STCV +A +T +CP + E
Sbjct: 230 CSQQRRIRLLRRGPCGTRDPCSNVTCSFGSTCV----PSADGLTATCLCPATCLGAPEGP 285
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
+CG+DG Y S C L + C +I ++G C
Sbjct: 286 VCGSDGSDYPSECQLLRHACAHQENIFKKFDGPC 319
Score = 80.5 bits (197), Expect = 3e-15
Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 19/235 (8%)
Frame = +1
Query: 481 DRSAQAGNCWLRQAKNGRCQVLYKTELSKEECC-STGRLSTSWTEEDVNDNT-LFKWMIF 654
DR Q L +A+ GRC + S + C S GR S E V+ T +
Sbjct: 537 DRCGQCRFGALCEAETGRCVCPSECVASAQPVCGSDGRTYASECELHVHACTHQISLHVA 596
Query: 655 NGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRN 834
+ G PC +TC + C G C + PRC P GPVCG DG TY +
Sbjct: 597 SAG-----PC-QTCGDTVCAFGAVCSAGQCVCPRCERPPP-------GPVCGSDGVTYGS 643
Query: 835 ECALLKARCKEQPELEVQYQGKCKKT--------------CRDVFCPGSSTCVVDQTNNA 972
C L +A C++Q ++E + G C++ C C + + +
Sbjct: 644 SCELREAACQQQTQIEEAWAGPCEQAECGSGGSGSGEDGECEPELCRQRGGIWDEDSEDG 703
Query: 973 YCV---TCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
CV +C + P +CG+DGVTY + C L+KA C + + +G C
Sbjct: 704 PCVCGFSCQGVLRSP------VCGSDGVTYRTECELKKARCESQPELYVVAQGAC 752
Score = 68.9 bits (167), Expect = 9e-12
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Frame = +1
Query: 679 PCKETCENVDCGPGKKCRMNKKNK-PRCVCAPDCSNITWKG-PVCGLDGKTYRNECALLK 852
PC + C+ + CR+N + + P + P+ + +G PVCG DG TY N+C + +
Sbjct: 318 PC-DPCQGFLSDLSRTCRVNPRTRRPEMLLRPE--SCPPRGTPVCGDDGVTYDNDCVMGR 374
Query: 853 ARCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQY 1026
+ L+ G+C + C + C ++ C + + C +C+R+ + + +
Sbjct: 375 TGAAQGILLQKVRSGQCQPRDQCPEP-CRFNAVC-LSRRGRPRC-SCDRVVCD--GAYRP 429
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS-CEDIQCTGGKKCLWDFRXAE 1203
+C +DG TY + C ++A C RSI + ++G C ++ S C +QC G C AE
Sbjct: 430 VCAHDGHTYDNDCWRQQAECQQQRSIPMKHQGPCDQSPSPCRGVQCPFGAMCAVKNGEAE 489
Query: 1204 AVVPSAMS 1227
P A S
Sbjct: 490 CACPKACS 497
Score = 63.5 bits (153), Expect = 4e-10
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 19/90 (21%)
Frame = +1
Query: 694 CENVDCGPG------------KKCRM-------NKKNKPRCVCAPDCSNITWKGPVCGLD 816
CE +CG G + CR + ++ P CVC C + + PVCG D
Sbjct: 666 CEQAECGSGGSGSGEDGECEPELCRQRGGIWDEDSEDGP-CVCGFSCQGVL-RSPVCGSD 723
Query: 817 GKTYRNECALLKARCKEQPELEVQYQGKCK 906
G TYR EC L KARC+ QPEL V QG C+
Sbjct: 724 GVTYRTECELKKARCESQPELYVVAQGACR 753
Score = 59.7 bits (143), Expect = 5e-09
Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 3/163 (1%)
Frame = +1
Query: 649 IFNGGAPNCIPCKETCENVDCGPGKKCRMN-KKNKPRCVCAPDCSNITWKGPVCGL--DG 819
I G C PC C P R + ++ C C P + GP CG DG
Sbjct: 838 IVTDGRSGCTPCS-------CDPRGAVRDDCEQMTGLCSCKPGVA-----GPKCGQCPDG 885
Query: 820 KTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRIC 999
+ AL A C+ KTC ++ C ++CV ++ +A+CV C
Sbjct: 886 R------ALGPAGCETD--------SSPPKTCAEMLCEFGASCV-EEAGSAHCVCPTPTC 930
Query: 1000 PEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
P +++ +CG+DGVTY + C LR C G I + G C
Sbjct: 931 PGADATK--VCGSDGVTYGNECQLRTIACRQGLEISIQSFGPC 971
Score = 56.2 bits (134), Expect = 6e-08
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +1
Query: 913 CRDVFCPGSSTCV--VDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATC 1086
CR + C + C D+ A CV CP + +CG+D TYS+ C L++A C
Sbjct: 174 CRGMLCGFGAVCEPSADEPGRASCVCKKSSCPSVVAP---VCGSDASTYSNECELQRAQC 230
Query: 1087 LLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCL 1182
R I L G C C ++ C+ G C+
Sbjct: 231 SQQRRIRLLRRGPCGTRDPCSNVTCSFGSTCV 262
>ref|XP_604151.4| PREDICTED: neurexin 2-like [Bos taurus].
Length = 2043
Score = 95.9 bits (237), Expect = 7e-20
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Frame = +1
Query: 682 CKETCE-NVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR 858
C E C N C ++++ +PRC C + ++ PVC DG TY N+C +A
Sbjct: 397 CPEPCRFNAVC-------LSRRGRPRCSCDRVVCDGAYR-PVCAHDGHTYDNDCWRQQAE 448
Query: 859 CKEQPELEVQYQGKCKKT---CRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSE-QY 1026
C++Q + +++QG C ++ CR V CP + C V + A C CP+ S
Sbjct: 449 CQQQRSIPMKHQGPCDQSPSPCRGVQCPFGAMCAV-KNGEAECA-----CPKACSGVYDP 502
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSC 1146
+CG+DG+TY SAC L C LGR I +A G C + C
Sbjct: 503 VCGSDGITYGSACELEATACALGREIRVARRGPCDRCGQC 542
Score = 90.5 bits (223), Expect = 3e-18
Identities = 57/158 (36%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Frame = +1
Query: 709 CGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQ 888
CG + + + RCVC +C + PVCG DG+TY +EC L C Q L V
Sbjct: 539 CGQCRFGALCEAETGRCVCPSEC--VASAQPVCGSDGRTYASECELHVHACTHQISLHVA 596
Query: 889 YQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACH 1068
G C+ TC D C + C Q C C R P P +CG+DGVTY S+C
Sbjct: 597 SAGPCQ-TCGDTVCAFGAVCSAGQ---CVCPRCERPPPGP------VCGSDGVTYGSSCE 646
Query: 1069 LRKATCLLGRSIGLAYEGKCIKAK-------SCEDIQC 1161
LR+A C I A+ G C +A+ S ED +C
Sbjct: 647 LREAACQQQTQIEEAWAGPCEQAECGSGGSGSGEDGEC 684
Score = 82.0 bits (201), Expect = 1e-15
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Frame = +1
Query: 688 ETCENVDCGPGKKCR--MNKKNKPRCVCAPD-CSNITWKGPVCGLDGKTYRNECALLKAR 858
+ C + CG G C ++ + CVC C ++ PVCG D TY NEC L +A+
Sbjct: 172 DACRGMLCGFGAVCEPSADEPGRASCVCKKSSCPSVV--APVCGSDASTYSNECELQRAQ 229
Query: 859 CKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPT--SSEQY 1026
C +Q + + +G C + C +V C STCV +A +T +CP + E
Sbjct: 230 CSQQRRIRLLRRGPCGTRDPCSNVTCSFGSTCV----PSADGLTATCLCPATCLGAPEGP 285
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
+CG+DG Y S C L + C +I ++G C
Sbjct: 286 VCGSDGSDYPSECQLLRHACAHQENIFKKFDGPC 319
Score = 80.5 bits (197), Expect = 3e-15
Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 19/235 (8%)
Frame = +1
Query: 481 DRSAQAGNCWLRQAKNGRCQVLYKTELSKEECC-STGRLSTSWTEEDVNDNT-LFKWMIF 654
DR Q L +A+ GRC + S + C S GR S E V+ T +
Sbjct: 537 DRCGQCRFGALCEAETGRCVCPSECVASAQPVCGSDGRTYASECELHVHACTHQISLHVA 596
Query: 655 NGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRN 834
+ G PC +TC + C G C + PRC P GPVCG DG TY +
Sbjct: 597 SAG-----PC-QTCGDTVCAFGAVCSAGQCVCPRCERPPP-------GPVCGSDGVTYGS 643
Query: 835 ECALLKARCKEQPELEVQYQGKCKKT--------------CRDVFCPGSSTCVVDQTNNA 972
C L +A C++Q ++E + G C++ C C + + +
Sbjct: 644 SCELREAACQQQTQIEEAWAGPCEQAECGSGGSGSGEDGECEPELCRQRGGIWDEDSEDG 703
Query: 973 YCV---TCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
CV +C + P +CG+DGVTY + C L+KA C + + +G C
Sbjct: 704 PCVCGFSCQGVLRSP------VCGSDGVTYRTECELKKARCESQPELYVVAQGAC 752
Score = 68.9 bits (167), Expect = 9e-12
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Frame = +1
Query: 679 PCKETCENVDCGPGKKCRMNKKNK-PRCVCAPDCSNITWKG-PVCGLDGKTYRNECALLK 852
PC + C+ + CR+N + + P + P+ + +G PVCG DG TY N+C + +
Sbjct: 318 PC-DPCQGFLSDLSRTCRVNPRTRRPEMLLRPE--SCPPRGTPVCGDDGVTYDNDCVMGR 374
Query: 853 ARCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQY 1026
+ L+ G+C + C + C ++ C + + C +C+R+ + + +
Sbjct: 375 TGAAQGILLQKVRSGQCQPRDQCPEP-CRFNAVC-LSRRGRPRC-SCDRVVCD--GAYRP 429
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS-CEDIQCTGGKKCLWDFRXAE 1203
+C +DG TY + C ++A C RSI + ++G C ++ S C +QC G C AE
Sbjct: 430 VCAHDGHTYDNDCWRQQAECQQQRSIPMKHQGPCDQSPSPCRGVQCPFGAMCAVKNGEAE 489
Query: 1204 AVVPSAMS 1227
P A S
Sbjct: 490 CACPKACS 497
Score = 63.5 bits (153), Expect = 4e-10
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 19/90 (21%)
Frame = +1
Query: 694 CENVDCGPG------------KKCRM-------NKKNKPRCVCAPDCSNITWKGPVCGLD 816
CE +CG G + CR + ++ P CVC C + + PVCG D
Sbjct: 666 CEQAECGSGGSGSGEDGECEPELCRQRGGIWDEDSEDGP-CVCGFSCQGVL-RSPVCGSD 723
Query: 817 GKTYRNECALLKARCKEQPELEVQYQGKCK 906
G TYR EC L KARC+ QPEL V QG C+
Sbjct: 724 GVTYRTECELKKARCESQPELYVVAQGACR 753
Score = 59.7 bits (143), Expect = 5e-09
Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 3/163 (1%)
Frame = +1
Query: 649 IFNGGAPNCIPCKETCENVDCGPGKKCRMN-KKNKPRCVCAPDCSNITWKGPVCGL--DG 819
I G C PC C P R + ++ C C P + GP CG DG
Sbjct: 838 IVTDGRSGCTPCS-------CDPRGAVRDDCEQMTGLCSCKPGVA-----GPKCGQCPDG 885
Query: 820 KTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRIC 999
+ AL A C+ KTC ++ C ++CV ++ +A+CV C
Sbjct: 886 R------ALGPAGCETD--------SSPPKTCAEMLCEFGASCV-EEAGSAHCVCPTPTC 930
Query: 1000 PEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
P +++ +CG+DGVTY + C LR C G I + G C
Sbjct: 931 PGADATK--VCGSDGVTYGNECQLRTIACRQGLEISIQSFGPC 971
Score = 56.2 bits (134), Expect = 6e-08
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +1
Query: 913 CRDVFCPGSSTCV--VDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATC 1086
CR + C + C D+ A CV CP + +CG+D TYS+ C L++A C
Sbjct: 174 CRGMLCGFGAVCEPSADEPGRASCVCKKSSCPSVVAP---VCGSDASTYSNECELQRAQC 230
Query: 1087 LLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCL 1182
R I L G C C ++ C+ G C+
Sbjct: 231 SQQRRIRLLRRGPCGTRDPCSNVTCSFGSTCV 262
>ref|NP_001017950.1| follistatin-related protein 1 precursor [Bos taurus].
Length = 307
Score = 73.2 bits (178), Expect = 5e-13
Identities = 35/91 (38%), Positives = 50/91 (54%)
Frame = +1
Query: 694 CENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQP 873
C NV CG G++C + +K +P C+C C K PVCG +GKTY N C L + C
Sbjct: 30 CANVFCGAGRECAVTEKGEPTCLCIEQCK--PHKRPVCGSNGKTYLNHCELHRDACLTGS 87
Query: 874 ELEVQYQGKCKKTCRDVFCPGSSTCVVDQTN 966
+++V Y G CK+ + P +S V Q+N
Sbjct: 88 KIQVDYDGHCKE--KKSVSPSASPVVCYQSN 116
Score = 53.1 bits (126), Expect = 5e-07
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = +1
Query: 880 EVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSS 1059
E Q + K K C +VFC C V + C+ + P ++ +CG++G TY +
Sbjct: 20 EEQVRSK-SKICANVFCGAGRECAVTEKGEPTCLCIEQCKPH----KRPVCGSNGKTYLN 74
Query: 1060 ACHLRKATCLLGRSIGLAYEGKCIKAKS 1143
C L + CL G I + Y+G C + KS
Sbjct: 75 HCELHRDACLTGSKIQVDYDGHCKEKKS 102
>ref|
Animal-Genome cDNA 20110601C-012230
Animal-Genome cDNA 20110601C-012230
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012230
(1236 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536475.2| PREDICTED: similar to Follistatin precursor (FS... 379 e-110
Alignment gi|XP_855222.1| PREDICTED: similar to Follistatin-related prote... 182 6e-46
Alignment gi|XP_536713.2| PREDICTED: similar to agrin isoform 1 [Canis fa... 96 9e-20
Alignment gi|XP_855650.1| PREDICTED: similar to agrin isoform 2 [Canis fa... 96 9e-20
Alignment gi|XP_850499.1| PREDICTED: similar to Follistatin-related prote... 73 5e-13
Alignment gi|XP_867211.1| PREDICTED: similar to transmembrane protein wit... 72 1e-12
Alignment gi|XP_536010.2| PREDICTED: similar to Transmembrane protein wit... 69 1e-11
Alignment gi|XP_532014.2| PREDICTED: similar to transmembrane protein wit... 67 3e-11
Alignment gi|XP_860591.1| PREDICTED: similar to SPARC-like protein 1 prec... 54 2e-07
Alignment gi|XP_535648.2| PREDICTED: similar to SPARC-like protein 1 prec... 54 2e-07
>ref|XP_536475.2| PREDICTED: similar to Follistatin precursor (FS) (Activin-binding
protein) [Canis familiaris].
Length = 354
Score = 379 bits (973), Expect(2) = e-110
Identities = 188/268 (70%), Positives = 198/268 (73%), Gaps = 11/268 (4%)
Frame = +1
Query: 424 KHQPGGXXXXXXXXXQFMEDRSAQA--GNCWLRQAKNGRCQVLYKTELSKEECCSTGRLS 597
+H PGG QFMEDR+A G C R + Y + T L
Sbjct: 5 RHPPGGLCLLLLLLCQFMEDRNAHGKRGGCAARGG-SAAAGASYFSVGGAGSALGTAALG 63
Query: 598 TSWTEEDV---NDNTLFKWMIFNGGAPNC---IPCK---ETCENVDCGPGKKCRMNKKNK 750
WT + K + P+ P K +TCENVDCGPGKKCRMNKKNK
Sbjct: 64 RRWTNLATPGWSGVRRLKAVTLWDRQPSLERGYPLKGKGKTCENVDCGPGKKCRMNKKNK 123
Query: 751 PRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFC 930
PRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFC
Sbjct: 124 PRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFC 183
Query: 931 PGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGL 1110
PGSSTCVVDQTNNAYCVTCNR+CPEPTSSEQYLCGNDGVTY SACHLRKATCLLGRSIGL
Sbjct: 184 PGSSTCVVDQTNNAYCVTCNRMCPEPTSSEQYLCGNDGVTYPSACHLRKATCLLGRSIGL 243
Query: 1111 AYEGKCIKAKSCEDIQCTGGKKCLWDFR 1194
AYEGKCIKAKSCEDIQCTGGKKCLWDF+
Sbjct: 244 AYEGKCIKAKSCEDIQCTGGKKCLWDFK 271
ih.gov/protein/XP_001254149.2>XP_001254149.2
| PREDICTED: follistatin-like 1, partial [Bos taurus].
Length = 317
Score = 73.2 bits (178), Expect = 5e-13
Identities = 35/91 (38%), Positives = 50/91 (54%)
Frame = +1
Query: 694 CENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQP 873
C NV CG G++C + +K +P C+C C K PVCG +GKTY N C L + C
Sbjct: 10 CANVFCGAGRECAVTEKGEPTCLCIEQCK--PHKRPVCGSNGKTYLNHCELHRDACLTGS 67
Query: 874 ELEVQYQGKCKKTCRDVFCPGSSTCVVDQTN 966
+++V Y G CK+ + P +S V Q+N
Sbjct: 68 KIQVDYDGHCKE--KKSVSPSASPVVCYQSN 96
Score = 52.8 bits (125), Expect = 6e-07
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +1
Query: 907 KTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATC 1086
K C +VFC C V + C+ + P ++ +CG++G TY + C L + C
Sbjct: 8 KICANVFCGAGRECAVTEKGEPTCLCIEQCKPH----KRPVCGSNGKTYLNHCELHRDAC 63
Query: 1087 LLGRSIGLAYEGKCIKAKS 1143
L G I + Y+G C + KS
Sbjct: 64 LTGSKIQVDYDGHCKEKKS 82
>ref|XP_002689913.1| PREDICTED: tomoregulin-1-like [Bos taurus].
Length = 378
Score = 68.9 bits (167), Expect = 9e-12
Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Frame = +1
Query: 658 GGAPNCIPCKE---------TCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCG 810
GG I C E C+ C G C+ + +C C C T PVCG
Sbjct: 54 GGKGKSINCSELNVRESDLRVCDESSCKYGGVCKEDGDGL-KCACQFQCH--TNYIPVCG 110
Query: 811 LDGKTYRNECALLKARCKEQPELEVQYQGKC---------------------KKTCRDVF 927
+G TY+NEC L +A CK Q E+ V +G C +K +
Sbjct: 111 SNGDTYQNECFLRRAACKHQKEITVVARGPCYSDNGSGSGEGEEEGSGAEVHRKHSKCGP 170
Query: 928 CPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIG 1107
C + C D N CV CN C S +C +DG +Y++ C +R+A+C+ I
Sbjct: 171 CKYKAECDED-AENVGCV-CNIDC--SGYSFNPVCASDGSSYNNPCFVREASCIKQEQID 226
Query: 1108 LAYEGKC 1128
+ + G C
Sbjct: 227 IRHLGHC 233
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 709 CGPGK---KCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPEL 879
CGP K +C + +N CVC DCS ++ PVC DG +Y N C + +A C +Q ++
Sbjct: 168 CGPCKYKAECDEDAENVG-CVCNIDCSGYSFN-PVCASDGSSYNNPCFVREASCIKQEQI 225
Query: 880 EVQYQGKCKKT 912
++++ G C T
Sbjct: 226 DIRHLGHCTDT 236
>ref|NP_001192405.1| tomoregulin-1 [Bos taurus].
Length = 378
Score = 68.6 bits (166), Expect = 1e-11
Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Frame = +1
Query: 658 GGAPNCIPCKE---------TCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCG 810
GG + C E C+ C G C+ + +C C C T PVCG
Sbjct: 54 GGKGKSVNCSELNVRESDLRVCDESSCKYGGVCKEDGDGL-KCACQFQCH--TNYIPVCG 110
Query: 811 LDGKTYRNECALLKARCKEQPELEVQYQGKC---------------------KKTCRDVF 927
+G TY+NEC L +A CK Q E+ V +G C +K +
Sbjct: 111 SNGDTYQNECFLRRAACKHQKEITVVARGPCYSDNGSGSGEGEEEGSGAEVHRKHSKCGP 170
Query: 928 CPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIG 1107
C + C D N CV CN C S +C +DG +Y++ C +R+A+C+ I
Sbjct: 171 CKYKAECDED-AENVGCV-CNIDC--SGYSFNPVCASDGSSYNNPCFVREASCIKQEQID 226
Query: 1108 LAYEGKC 1128
+ + G C
Sbjct: 227 IRHLGHC 233
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 709 CGPGK---KCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPEL 879
CGP K +C + +N CVC DCS ++ PVC DG +Y N C + +A C +Q ++
Sbjct: 168 CGPCKYKAECDEDAENVG-CVCNIDCSGYSFN-PVCASDGSSYNNPCFVREASCIKQEQI 225
Query: 880 EVQYQGKCKKT 912
++++ G C T
Sbjct: 226 DIRHLGHCTDT 236
>ref|NP_001069569.1| tomoregulin-2 precursor [Bos taurus].
Length = 374
Score = 68.6 bits (166), Expect = 1e-11
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Frame = +1
Query: 757 CVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKC----------- 903
CVC C++ PVCG +G++Y+NEC L +A CK+Q E+ V +G C
Sbjct: 89 CVCQFKCNSDYV--PVCGSNGESYQNECYLRQAACKQQSEILVVSEGSCATDAGSGSGDG 146
Query: 904 ----------KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTY 1053
K+T C + C D + +CV CN C + + LC +DG +Y
Sbjct: 147 VHEGSGETSQKETSTCDICQFGAECDED-AEDVWCV-CNIDCSQTNFNP--LCASDGKSY 202
Query: 1054 SSACHLRKATCLLGRSIGLAYEGKC 1128
+AC +++A+C I + G+C
Sbjct: 203 DNACQIKEASCQKQEKIEVMSLGRC 227
Score = 52.0 bits (123), Expect = 1e-06
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 685 KETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCK 864
KET C G +C + ++ CVC DCS + P+C DGK+Y N C + +A C+
Sbjct: 157 KETSTCDICQFGAECDEDAEDV-WCVCNIDCSQTNFN-PLCASDGKSYDNACQIKEASCQ 214
Query: 865 EQPELEVQYQGKCK 906
+Q ++EV G+C+
Sbjct: 215 KQEKIEVMSLGRCQ 228
>ref|XP_618573.4| PREDICTED: low density lipoprotein receptor-related protein 1B [Bos
taurus].
Length = 2206
Score = 54.7 bits (130), Expect = 2e-07
Identities = 55/192 (28%), Positives = 72/192 (37%), Gaps = 28/192 (14%)
Frame = +1
Query: 682 CKETCENVDCGPGKKCRMNKKNKPRCVCAPD----------CSNITWKGPVCGLDGKTYR 831
CK TCEN G +C +N+K RC C P CSN G C + R
Sbjct: 1822 CKLTCEN-----GGRCILNEKGDLRCHCWPSYSGERCEINHCSNYCQNGGTC-MPSVLGR 1875
Query: 832 NECALLKARCKEQPELEVQYQG-KCKKTCRDVFCPGSSTCVVDQTNNAYC---------- 978
C+ + + G C KT + FC TC V N YC
Sbjct: 1876 PTCSCA-----------LGFTGPNCGKTVCEDFCQNGGTCSVTAGNQPYCHCQPEHTGDR 1924
Query: 979 ---VTCNRICPEPTSSEQYLCGNDGVTYSSACHLR--KATCLLGRSIGLAYEGKCIKAKS 1143
C+ C +SE G+DG + C +R + C + + I + G CI K
Sbjct: 1925 CQYYVCHHYC---VNSESCTIGDDG-SVECVCPIRYEGSKCEIDKCI-RCHGGHCIINKD 1979
Query: 1144 CEDI--QCTGGK 1173
EDI CT GK
Sbjct: 1980 SEDISCNCTNGK 1991
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,092,653
Number of extensions: 1611108
Number of successful extensions: 6325
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 6195
Number of HSP's successfully gapped: 39
Length of query: 412
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 307
Effective length of database: 14,207,134
Effective search space: 4361590138
Effective search space used: 4361590138
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Score = 38.9 bits (89), Expect(2) = e-110
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3
Query: 1170 KKVLMGFQXXRGRCSLCDELCP 1235
KK L F+ RGRCSLCDELCP
Sbjct: 264 KKCLWDFKVGRGRCSLCDELCP 285
Score = 100 bits (248), Expect = 4e-21
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Frame = +1
Query: 682 CKETCENVDCGPGKKCRMNKKNKPRCV-CAPDCSNITWKGP-VCGLDGKTYRNECALLKA 855
CK+TC +V C C +++ N CV C C T +CG DG TY + C L KA
Sbjct: 174 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRMCPEPTSSEQYLCGNDGVTYPSACHLRKA 233
Query: 856 RCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVD-QTNNAYCVTCNRICPEPTSSEQY 1026
C + + Y+GKC K+C D+ C G C+ D + C C+ +CPE + SE+
Sbjct: 234 TCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPE-SKSEEP 292
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
+C +D TY+S C +++A C G + + + G C
Sbjct: 293 VCASDNATYASECAMKEAACSSGVLLEVKHSGSC 326
Score = 59.7 bits (143), Expect = 6e-09
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 673 CIPCKETCENVDCGPGKKCRMN-KKNKPRC-VCAPDCSNITWKGPVCGLDGKTYRNECAL 846
CI K +CE++ C GKKC + K + RC +C C + PVC D TY +ECA+
Sbjct: 249 CIKAK-SCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPESKSEEPVCASDNATYASECAM 307
Query: 847 LKARCKEQPELEVQYQGKCKKTCRD 921
+A C LEV++ G C D
Sbjct: 308 KEAACSSGVLLEVKHSGSCNSISED 332
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012230
(1236 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003662.1| follistatin precursor [Sus scrofa]. 542 e-159
Alignment gi|XP_003356160.1| PREDICTED: agrin-like [Sus scrofa]. 97 2e-20
Alignment gi|XP_003359822.1| PREDICTED: hypothetical protein LOC100622982... 72 5e-13
Alignment gi|XP_003122087.1| PREDICTED: UPF0439 protein C9orf30 homolog i... 69 5e-12
Alignment gi|XP_003133602.2| PREDICTED: tomoregulin-2 [Sus scrofa]. 69 7e-12
Alignment gi|XP_003122088.1| PREDICTED: UPF0439 protein C9orf30 homolog i... 67 2e-11
Alignment gi|XP_003356162.1| PREDICTED: agrin-like [Sus scrofa]. 59 4e-09
Alignment gi|NP_001090891.1| SPARC-like protein 1 [Sus scrofa]. 55 6e-08
Alignment gi|XP_003357144.1| PREDICTED: SPARC-like protein 1-like [Sus sc... 54 2e-07
Alignment gi|XP_003134185.2| PREDICTED: SPARC-like isoform 1 [Sus scrofa]. 52 5e-07
>ref|NP_001003662.1| follistatin precursor [Sus scrofa].
Length = 344
Score = 542 bits (1397), Expect(2) = e-159
Identities = 245/257 (95%), Positives = 247/257 (96%)
Frame = +1
Query: 424 KHQPGGXXXXXXXXXQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 603
KHQPGG QFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS
Sbjct: 5 KHQPGGLCLLLLLLCQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 64
Query: 604 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 783
WTEEDVNDNTLFKWMIFNGGAP+CIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN
Sbjct: 65 WTEEDVNDNTLFKWMIFNGGAPSCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 124
Query: 784 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT 963
ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT
Sbjct: 125 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT 184
Query: 964 NNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS 1143
NNAYCVTCNRICPEPTSS QYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS
Sbjct: 185 NNAYCVTCNRICPEPTSSGQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS 244
Query: 1144 CEDIQCTGGKKCLWDFR 1194
CEDIQCTGGKKCLWDF+
Sbjct: 245 CEDIQCTGGKKCLWDFK 261
Score = 38.9 bits (89), Expect(2) = e-159
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3
Query: 1170 KKVLMGFQXXRGRCSLCDELCP 1235
KK L F+ RGRCSLCDELCP
Sbjct: 254 KKCLWDFKAGRGRCSLCDELCP 275
Score = 103 bits (257), Expect = 2e-22
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Frame = +1
Query: 682 CKETCENVDCGPGKKCRMNKKNKPRCV-CAPDCSNITWKGP-VCGLDGKTYRNECALLKA 855
CK+TC +V C C +++ N CV C C T G +CG DG TY + C L KA
Sbjct: 164 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSGQYLCGNDGVTYSSACHLRKA 223
Query: 856 RCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVD-QTNNAYCVTCNRICPEPTSSEQY 1026
C + + Y+GKC K+C D+ C G C+ D + C C+ +CPE + SE+
Sbjct: 224 TCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKAGRGRCSLCDELCPE-SKSEEP 282
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
+C +D TY+S C +++A C G + + + G C
Sbjct: 283 VCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316
Score = 60.1 bits (144), Expect = 3e-09
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 673 CIPCKETCENVDCGPGKKCRMN-KKNKPRC-VCAPDCSNITWKGPVCGLDGKTYRNECAL 846
CI K +CE++ C GKKC + K + RC +C C + PVC D TY +ECA+
Sbjct: 239 CIKAK-SCEDIQCTGGKKCLWDFKAGRGRCSLCDELCPESKSEEPVCASDNATYASECAM 297
Query: 847 LKARCKEQPELEVQYQGKCKKTCRD 921
+A C LEV++ G C D
Sbjct: 298 KEAACSSGVLLEVKHSGSCNSISED 322
>ref|XP_003356160.1| PREDICTED: agrin-like [Sus scrofa].
Length = 1015
Score = 96.7 bits (239), Expect = 2e-20
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Frame = +1
Query: 673 CIP---CKETCE-NVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNEC 840
C+P C ETC + C ++++ +PRC C + ++ PVC DG TY N+C
Sbjct: 196 CLPRDQCPETCRFSAVC-------LSRRGRPRCSCDRVICDGAYR-PVCAHDGHTYDNDC 247
Query: 841 ALLKARCKEQPELEVQYQGKCKKT---CRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPT 1011
+A C++Q + ++QG C + C V CP +TC V + A CV C + C +
Sbjct: 248 WRQQAECQQQRSIPAKHQGPCDQPPSPCLGVQCPFGATCAV-KNGEAECV-CQQTC---S 302
Query: 1012 SSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSC 1146
+CG+DGVTY SAC L C LG+ I +A G C + C
Sbjct: 303 GLYDPVCGSDGVTYGSACELEATACALGQEIRVARRGPCDRCGQC 347
Score = 87.4 bits (215), Expect = 1e-17
Identities = 57/158 (36%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Frame = +1
Query: 709 CGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQ 888
CG + + + RCVC +C + PVCG DG TY +EC L C Q L V
Sbjct: 344 CGQCRFGALCEAETGRCVCPSEC--VASAQPVCGSDGHTYASECELHVHACTHQISLHVA 401
Query: 889 YQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACH 1068
G C+ TC + C + C+ Q C C P P +CG+DGVTY SAC
Sbjct: 402 SAGHCQ-TCGESVCAFGAVCLAGQ---CVCPRCEHPPPGP------VCGSDGVTYRSACE 451
Query: 1069 LRKATCLLGRSIGLAYEGKCIKAK-------SCEDIQC 1161
LR+A C R I A G C +A+ S ED +C
Sbjct: 452 LREAACQQQRQIEEARGGPCEQAECGSGGSGSGEDGEC 489
Score = 79.3 bits (194), Expect = 4e-15
Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 15/231 (6%)
Frame = +1
Query: 481 DRSAQAGNCWLRQAKNGRCQVLYKTELSKEECC-STGRLSTSWTEEDVNDNTLFKWMIFN 657
DR Q L +A+ GRC + S + C S G S E V+ T + +
Sbjct: 342 DRCGQCRFGALCEAETGRCVCPSECVASAQPVCGSDGHTYASECELHVHACT-HQISLHV 400
Query: 658 GGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNE 837
A +C +TC C G C + PRC P GPVCG DG TYR+
Sbjct: 401 ASAGHC----QTCGESVCAFGAVCLAGQCVCPRCEHPPP-------GPVCGSDGVTYRSA 449
Query: 838 CALLKARCKEQPELEVQYQGKCKKT--------------CRDVFCPGSSTCVVDQTNNAY 975
C L +A C++Q ++E G C++ C C + + +
Sbjct: 450 CELREAACQQQRQIEEARGGPCEQAECGSGGSGSGEDGECEQELCRQRGGIWDEDSEDGP 509
Query: 976 CVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
CV C+ C S +CG+DGVTY + C L+KA C + + + +G C
Sbjct: 510 CV-CDFSCQGVLRSP--VCGSDGVTYGTECELKKARCDSRQELYVVAQGAC 557
Score = 73.6 bits (179), Expect = 2e-13
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Frame = +1
Query: 685 KETCENVDCGPGKKC-RMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARC 861
++ C N+ C G C R + C+C C + PVCG DG Y +EC LL+ C
Sbjct: 52 RDPCSNITCSFGSTCARSSDGLTATCLCPATCLGAP-ESPVCGSDGTDYPSECQLLRHAC 110
Query: 862 KEQPELEVQYQGKCKKTCRDVFCPGSSTCVVD-QTNNAYCVTCNRICPEPTSSEQYLCGN 1038
Q + ++ G C C+ S C V+ +T + + CP S + +CG+
Sbjct: 111 ARQENVFKKFDGPC-DPCQGALNDLSRVCRVNPRTRHPEMLLRPESCP---SRQAPVCGD 166
Query: 1039 DGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCL 1182
DGVTY + C + + G + G+C+ C + C CL
Sbjct: 167 DGVTYDNDCVMGRTGATRGLLLQKVRSGQCLPRDQCPE-TCRFSAVCL 213
Score = 54.7 bits (130), Expect = 1e-07
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Frame = +1
Query: 694 CENVDCGPG------------KKCRM-------NKKNKPRCVCAPDCSNITWKGPVCGLD 816
CE +CG G + CR + ++ P CVC C + + PVCG D
Sbjct: 471 CEQAECGSGGSGSGEDGECEQELCRQRGGIWDEDSEDGP-CVCDFSCQGVL-RSPVCGSD 528
Query: 817 GKTYRNECALLKARCKEQPELEVQYQGKCK 906
G TY EC L KARC + EL V QG C+
Sbjct: 529 GVTYGTECELKKARCDSRQELYVVAQGACR 558
>ref|XP_003359822.1| PREDICTED: hypothetical protein LOC100622982 [Sus scrofa].
Length = 85
Score = 72.4 bits (176), Expect = 5e-13
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = -2
Query: 785 MLEQSGAQTQRGLFFLFIRHFFPGPQSTFSHVSLHG 678
MLEQSGAQTQRGLFFLFIRHFFPGPQSTFSHVS G
Sbjct: 1 MLEQSGAQTQRGLFFLFIRHFFPGPQSTFSHVSKMG 36
>ref|XP_003122087.1| PREDICTED: UPF0439 protein C9orf30 homolog isoform 1 [Sus scrofa].
Length = 378
Score = 68.9 bits (167), Expect = 5e-12
Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Frame = +1
Query: 658 GGAPNCIPCKE---------TCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCG 810
GG I C E C+ C G C+ + +C C C T PVCG
Sbjct: 54 GGKGKSINCSELNVRESDIRVCDESSCKYGGVCKEDGDGL-KCACQFQCH--TNYIPVCG 110
Query: 811 LDGKTYRNECALLKARCKEQPELEVQYQGKC---------------------KKTCRDVF 927
+G TY+NEC L +A CK Q E+ V +G C +K +
Sbjct: 111 SNGDTYQNECFLRRAACKHQKEITVVARGPCYSDNGSGSGEGEEEGSGAEVHRKHSKCGP 170
Query: 928 CPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIG 1107
C + C D N CV CN C S +C +DG +Y++ C +R+A+C+ I
Sbjct: 171 CKYKAECDED-AENVGCV-CNIDC--SGYSFNPVCASDGSSYNNPCFVREASCIKQEQID 226
Query: 1108 LAYEGKC 1128
+ + G C
Sbjct: 227 IRHLGHC 233
Score = 52.0 bits (123), Expect = 7e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 709 CGPGK---KCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPEL 879
CGP K +C + +N CVC DCS ++ PVC DG +Y N C + +A C +Q ++
Sbjct: 168 CGPCKYKAECDEDAENVG-CVCNIDCSGYSFN-PVCASDGSSYNNPCFVREASCIKQEQI 225
Query: 880 EVQYQGKCKKT 912
++++ G C T
Sbjct: 226 DIRHLGHCTDT 236
>ref|XP_003133602.2| PREDICTED: tomoregulin-2 [Sus scrofa].
Length = 250
Score = 68.6 bits (166), Expect = 7e-12
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Frame = +1
Query: 757 CVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKC----------- 903
CVC C++ PVCG +G++Y+NEC L +A CK+Q E+ V +G C
Sbjct: 89 CVCQFKCNSDYV--PVCGSNGESYQNECYLRQAACKQQSEILVVSEGSCATDAGSGSGDG 146
Query: 904 ----------KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTY 1053
K+T C + C D + +CV CN C + + LC +DG +Y
Sbjct: 147 VHEGSGETSQKETSTCDICQFGAECDED-AEDVWCV-CNIDCSQTNFNP--LCASDGKSY 202
Query: 1054 SSACHLRKATCLLGRSIGLAYEGKC 1128
+AC +++A+C I + G+C
Sbjct: 203 DNACQIKEASCQKQEKIEVMSLGRC 227
Score = 52.0 bits (123), Expect = 7e-07
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 685 KETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCK 864
KET C G +C + ++ CVC DCS + P+C DGK+Y N C + +A C+
Sbjct: 157 KETSTCDICQFGAECDEDAEDV-WCVCNIDCSQTNFN-PLCASDGKSYDNACQIKEASCQ 214
Query: 865 EQPELEVQYQGKCK 906
+Q ++EV G+C+
Sbjct: 215 KQEKIEVMSLGRCQ 228
>ref|XP_003122088.1| PREDICTED: UPF0439 protein C9orf30 homolog isoform 2 [Sus scrofa].
Length = 454
Score = 67.4 bits (163), Expect = 2e-11
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Frame = +1
Query: 694 CENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQP 873
C+ C G C+ + +C C C T PVCG +G TY+NEC L +A CK Q
Sbjct: 151 CDESSCKYGGVCKEDGDGL-KCACQFQCH--TNYIPVCGSNGDTYQNECFLRRAACKHQK 207
Query: 874 ELEVQYQGKC---------------------KKTCRDVFCPGSSTCVVDQTNNAYCVTCN 990
E+ V +G C +K + C + C D N CV CN
Sbjct: 208 EITVVARGPCYSDNGSGSGEGEEEGSGAEVHRKHSKCGPCKYKAECDED-AENVGCV-CN 265
Query: 991 RICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
C S +C +DG +Y++ C +R+A+C+ I + + G C
Sbjct: 266 IDC--SGYSFNPVCASDGSSYNNPCFVREASCIKQEQIDIRHLGHC 309
Score = 52.0 bits (123), Expect = 7e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 709 CGPGK---KCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPEL 879
CGP K +C + +N CVC DCS ++ PVC DG +Y N C + +A C +Q ++
Sbjct: 244 CGPCKYKAECDEDAENVG-CVCNIDCSGYSFN-PVCASDGSSYNNPCFVREASCIKQEQI 301
Query: 880 EVQYQGKCKKT 912
++++ G C T
Sbjct: 302 DIRHLGHCTDT 312
>ref|XP_003356162.1| PREDICTED: agrin-like [Sus scrofa].
Length = 1209
Score = 59.3 bits (142), Expect = 4e-09
Identities = 46/145 (31%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Frame = +1
Query: 751 PRCVCAP------DCSNITW--------KGPVCGL--DGKTYRNECALLKARCKEQPELE 882
P C C P DC +T GP CG DG AL A C+ P
Sbjct: 52 PACSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGH------ALGPAGCETDPS-- 103
Query: 883 VQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPT---SSEQYLCGNDGVTY 1053
KTC ++ C ++CV ++ +A+CV CP PT ++ +CG+DGVTY
Sbjct: 104 ------APKTCAEMPCEFGASCV-EEAGSAHCV-----CPTPTCLGANATKVCGSDGVTY 151
Query: 1054 SSACHLRKATCLLGRSIGLAYEGKC 1128
+ C LR C G I + G C
Sbjct: 152 GNECQLRTIACRQGLDISVQSLGPC 176
Score = 48.9 bits (115), Expect = 6e-06
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 688 ETCENVDCGPGKKCRMNKKNKPRCVC-APDC--SNITWKGPVCGLDGKTYRNECALLKAR 858
+TC + C G C + + CVC P C +N T VCG DG TY NEC L
Sbjct: 106 KTCAEMPCEFGASC-VEEAGSAHCVCPTPTCLGANAT---KVCGSDGVTYGNECQLRTIA 161
Query: 859 CKEQPELEVQYQGKCKK 909
C++ ++ VQ G C++
Sbjct: 162 CRQGLDISVQSLGPCQE 178
>ref|NP_001090891.1| SPARC-like protein 1 [Sus scrofa].
Length = 662
Score = 55.5 bits (132), Expect = 6e-08
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Frame = +1
Query: 892 QGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHL 1071
+G +C C C DQ +CV + + PT +CG D TY+S+CHL
Sbjct: 424 RGHSVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHL 483
Query: 1072 RKATCLL-----GRSIGLAYEGKCIKAKSCEDIQCT 1164
C L G + L Y G C +C D + T
Sbjct: 484 FATKCRLEGTKKGHQLQLDYFGACKSIPACTDFEVT 519
Score = 52.0 bits (123), Expect = 7e-07
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +1
Query: 688 ETCENVDCGPGKKCRMNKKNKPRCVCAP--DCSNITWKGPVCGLDGKTYRNECALLKARC 861
++C + C G C+ +++ KP CVC C VCG D +TY + C L +C
Sbjct: 429 DSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHLFATKC 488
Query: 862 -----KEQPELEVQYQGKCKK--TCRD 921
K+ +L++ Y G CK C D
Sbjct: 489 RLEGTKKGHQLQLDYFGACKSIPACTD 515
>ref|XP_003357144.1| PREDICTED: SPARC-like protein 1-like [Sus scrofa].
Length = 705
Score = 53.5 bits (127), Expect = 2e-07
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Frame = +1
Query: 688 ETCENVDCGPGKKCRMNKKNKPRCVCAP--DCSNITWKGPVCGLDGKTYRNECALLKARC 861
++C + C G C+ +++ KP CVC C VCG D +TY + C L +C
Sbjct: 472 DSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHLFATKC 531
Query: 862 -----KEQPELEVQYQGKCKK--TCRD 921
K++ +L++ Y G CK C D
Sbjct: 532 RLEGTKKEHQLQLDYFGACKSIPACTD 558
Score = 52.4 bits (124), Expect = 5e-07
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +1
Query: 892 QGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHL 1071
+G +C C C DQ +CV + + PT +CG D TY+S+CHL
Sbjct: 467 RGHSVDSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKLLDQVCGTDNQTYASSCHL 526
Query: 1072 RKATCLL-----GRSIGLAYEGKCIKAKSCEDIQCT 1164
C L + L Y G C +C D + T
Sbjct: 527 FATKCRLEGTKKEHQLQLDYFGACKSIPACTDFEVT 562
>ref|XP_003134185.2| PREDICTED: SPARC-like isoform 1 [Sus scrofa].
Length = 300
Score = 52.4 bits (124), Expect = 5e-07
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Frame = +1
Query: 880 EVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPTSSEQYLCGNDGVTYS 1056
E + + + C++ C C +D+ N+ CV + CP P + +C ND T+
Sbjct: 58 EAEEEVVAENPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPXXXXRQVCSNDNKTFD 117
Query: 1057 SACHLRKATCLL-----GRSIGLAYEGKCIKAKSCEDIQCT 1164
S+CH C L G + L Y G C C D + T
Sbjct: 118 SSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELT 158
Score = 48.1 bits (113), Expect = 1e-05
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Frame = +1
Query: 652 FNGGAPNC---IPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCS---NITWKGPVCGL 813
F+ GA + + C+N C GK C +++ N P CVC S VC
Sbjct: 52 FDDGAEEAEEEVVAENPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPXXXXRQVCSN 111
Query: 814 DGKTYRNECALLKARC-----KEQPELEVQYQGKCK 906
D KT+ + C +C K+ +L + Y G CK
Sbjct: 112 DNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCK 147
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,212,140
Number of extensions: 1067567
Number of successful extensions: 4193
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 4117
Number of HSP's successfully gapped: 31
Length of query: 412
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 311
Effective length of database: 8,829,335
Effective search space: 2745923185
Effective search space used: 2745923185
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012230
(1236 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032072.1| follistatin [Mus musculus]. 530 e-154
Alignment gi|NP_113557.1| follistatin-related protein 3 precursor [Mus mu... 225 5e-59
Alignment gi|NP_067617.3| agrin [Mus musculus]. 99 5e-21
Alignment gi|NP_032073.2| follistatin-related protein 1 precursor [Mus mu... 72 7e-13
Alignment gi|NP_062764.1| tomoregulin-2 precursor [Mus musculus]. 69 1e-11
Alignment gi|NP_067411.1| tomoregulin-1 precursor [Mus musculus]. 67 3e-11
Alignment gi|NP_033268.1| SPARC precursor [Mus musculus]. 52 1e-06
Alignment gi|NP_034227.3| SPARC-like protein 1 precursor [Mus musculus]. 51 2e-06
Alignment gi|NP_848788.2| follistatin-related protein 5 precursor [Mus mu... 51 2e-06
Alignment gi|NP_071710.2| SPARC-related modular calcium-binding protein 2... 49 8e-06
>ref|NP_032072.1| follistatin [Mus musculus].
Length = 343
Score = 530 bits (1366), Expect(2) = e-154
Identities = 241/255 (94%), Positives = 243/255 (95%)
Frame = +1
Query: 424 KHQPGGXXXXXXXXXQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 603
+HQPGG QFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS
Sbjct: 5 RHQPGGLCLLLLLLCQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 64
Query: 604 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 783
WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN
Sbjct: 65 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 124
Query: 784 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT 963
ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT
Sbjct: 125 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT 184
Query: 964 NNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS 1143
NNAYCVTCNRICPEP+SSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCI KS
Sbjct: 185 NNAYCVTCNRICPEPSSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCI-TKS 243
Query: 1144 CEDIQCTGGKKCLWD 1188
CEDIQC GGKKCLWD
Sbjct: 244 CEDIQCGGGKKCLWD 258
Score = 35.8 bits (81), Expect(2) = e-154
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3
Query: 1170 KKVLMGFQXXRGRCSLCDELCP 1235
KK L + RGRCSLCDELCP
Sbjct: 253 KKCLWDSKVGRGRCSLCDELCP 274
Score = 96.7 bits (239), Expect = 3e-20
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Frame = +1
Query: 682 CKETCENVDCGPGKKCRMNKKNKPRCV-----CAPDCSNITWKGPVCGLDGKTYRNECAL 846
CK+TC +V C C +++ N CV C S+ + +CG DG TY + C L
Sbjct: 164 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQY---LCGNDGVTYSSACHL 220
Query: 847 LKARCKEQPELEVQYQGKC-KKTCRDVFCPGSSTCVVD-QTNNAYCVTCNRICPEPTSSE 1020
KA C + + Y+GKC K+C D+ C G C+ D + C C+ +CP+ S E
Sbjct: 221 RKATCLLGRSIGLAYEGKCITKSCEDIQCGGGKKCLWDSKVGRGRCSLCDELCPDSKSDE 280
Query: 1021 QYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
+C +D TY+S C +++A C G + + + G C
Sbjct: 281 P-VCASDNATYASECAMKEAACSSGVLLEVKHSGSC 315
>ref|NP_113557.1| follistatin-related protein 3 precursor [Mus musculus].
Length = 256
Score = 225 bits (574), Expect = 5e-59
Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 1/215 (0%)
Frame = +1
Query: 487 SAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGA 666
S G CWL+Q + C ++ KT +S+EECC++G ++T+W+ N + ++ G
Sbjct: 30 SVPGGVCWLQQGREATCSLVLKTRVSREECCASGNINTAWSNFTHPGNKIS--LLGFLGL 87
Query: 667 PNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECAL 846
+C+PCK++C+ V+CGPGK CRM +P C C P+C + VCG DG TYR+EC L
Sbjct: 88 VHCLPCKDSCDGVECGPGKACRM-LGGRPHCECVPNCEGLPAGFQVCGSDGATYRDECEL 146
Query: 847 LKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPTSSEQ 1023
ARC+ P+L V Y+G+C+K+C V CP +C+VDQT +A+CV C CP P++ Q
Sbjct: 147 RTARCRGHPDLRVMYRGRCQKSCAQVVCPRPQSCLVDQTGSAHCVVCRAAPCPVPSNPGQ 206
Query: 1024 YLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
LCGN+ VTY S+CHLR+ATC LGRSIG+ + G C
Sbjct: 207 ELCGNNNVTYISSCHLRQATCFLGRSIGVRHPGIC 241
Score = 51.6 bits (122), Expect = 1e-06
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 901 CKKTCRDVFC-PGSSTCVVDQTNNAYCV-TCNRICPEPTSSEQYLCGNDGVTYSSACHLR 1074
CK +C V C PG + ++ + CV C + P + +CG+DG TY C LR
Sbjct: 93 CKDSCDGVECGPGKACRMLGGRPHCECVPNCEGL---PAGFQ--VCGSDGATYRDECELR 147
Query: 1075 KATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWD-FRXAEAVVPSAMSC 1230
A C + + Y G+C KSC + C + CL D A VV A C
Sbjct: 148 TARCRGHPDLRVMYRGRC--QKSCAQVVCPRPQSCLVDQTGSAHCVVCRAAPC 198
>ref|NP_067617.3| agrin [Mus musculus].
Length = 2034
Score = 99.4 bits (246), Expect = 5e-21
Identities = 57/162 (35%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Frame = +1
Query: 682 CKETCE-NVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKG---PVCGLDGKTYRNECALL 849
C ETC+ N C ++++ +P C C +T G PVC DG TY N+C
Sbjct: 397 CPETCQFNSVC-------LSRRGRPHC----SCDRVTCDGAYRPVCAQDGHTYDNDCWRQ 445
Query: 850 KARCKEQPELEVQYQGKCKKT---CRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSE 1020
+A C++Q + ++QG C +T CR C +TC V + A C C R+C +
Sbjct: 446 QAECRQQQTIPPKHQGPCDQTPSPCRGAQCAFGATCTV-KNGKAVC-ECQRVC---SGGY 500
Query: 1021 QYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSC 1146
+CG+DGVTY S C L C LGR I +A G C + C
Sbjct: 501 DPVCGSDGVTYGSVCELESMACTLGREIRVARRGPCDRCGQC 542
Score = 85.5 bits (210), Expect = 8e-17
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +1
Query: 664 APNCIPCKETCENVDCGPGKKCRMNKKNKPR--CVCAPD-CSNITWKGPVCGLDGKTYRN 834
AP+ P + C + CG G C + ++ R CVC + C + PVCG D TY N
Sbjct: 166 APSMPP--DVCRGMLCGFGAVCEPSVEDPGRASCVCKKNVCPAMV--APVCGSDASTYSN 221
Query: 835 ECALLKARCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVD---QTNNAYCVTCNRIC 999
EC L +A+C +Q + + QG C + C +V C STCV QT + C T
Sbjct: 222 ECELQRAQCNQQRRIRLLRQGPCGSRDPCANVTCSFGSTCVPSADGQTASCLCPTTCFGA 281
Query: 1000 PEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
P+ T +CG+DGV Y S C L + C I ++G C
Sbjct: 282 PDGT-----VCGSDGVDYPSECQLLRHACANQEHIFKKFDGPC 319
Score = 85.5 bits (210), Expect = 8e-17
Identities = 68/231 (29%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Frame = +1
Query: 481 DRSAQAGNCWLRQAKNGRCQVLYK-TELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFN 657
DR Q L + + GRC + E ++ C S G S E V+ T + ++
Sbjct: 537 DRCGQCRFGSLCEVETGRCVCPSECVESAQPVCGSDGHTYASECELHVHACT-HQISLYV 595
Query: 658 GGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNE 837
A +C C ET C G C + PRC P GPVCG DG TY +
Sbjct: 596 ASAGHCQTCGETV----CTFGAVCSAGQCVCPRCEHPPP-------GPVCGSDGVTYLSA 644
Query: 838 CALLKARCKEQPELEVQYQGKCK--------------KTCRDVFCPGSSTCVVDQTNNAY 975
C L +A C++Q ++E G C+ C C + + +
Sbjct: 645 CELREAACQQQVQIEEARAGPCEPAECGSGGSGSGEDNACEQELCRQHGGVWDEDSEDGP 704
Query: 976 CVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
CV C+ C S +CG+DGVTYS+ CHL+KA C + + +A +G C
Sbjct: 705 CV-CDFSCQSVLKSP--VCGSDGVTYSTECHLKKARCEARQELYVAAQGAC 752
Score = 81.6 bits (200), Expect = 1e-15
Identities = 54/154 (35%), Positives = 68/154 (44%)
Frame = +1
Query: 709 CGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQ 888
CG + + + RCVC +C + PVCG DG TY +EC L C Q L V
Sbjct: 539 CGQCRFGSLCEVETGRCVCPSEC--VESAQPVCGSDGHTYASECELHVHACTHQISLYVA 596
Query: 889 YQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACH 1068
G C+ TC + C + C Q C C P P +CG+DGVTY SAC
Sbjct: 597 SAGHCQ-TCGETVCTFGAVCSAGQ---CVCPRCEHPPPGP------VCGSDGVTYLSACE 646
Query: 1069 LRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGG 1170
LR+A C I A +A CE +C G
Sbjct: 647 LREAACQQQVQIEEA------RAGPCEPAECGSG 674
Score = 61.2 bits (147), Expect = 2e-09
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Frame = +1
Query: 673 CIPCKETCENVDCGPGKKCRMNKKNK-PRCVCAPDCSNITWKGPVCGLDGKTYRNECALL 849
C PC+ + +++ CR+N + + P + P+ + P+CG DG TY N+C +
Sbjct: 319 CDPCQGSMSDLN----HICRVNPRTRHPEMLLRPE-NCPAQHTPICGDDGVTYENDCVMS 373
Query: 850 KARCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQ 1023
+ L+ G+C + C + C +S C + + +C +C+R+ + + +
Sbjct: 374 RIGAARGLLLQKVRSGQCQTRDQCPET-CQFNSVC-LSRRGRPHC-SCDRVTCD--GAYR 428
Query: 1024 YLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS-CEDIQCTGGKKC 1179
+C DG TY + C ++A C ++I ++G C + S C QC G C
Sbjct: 429 PVCAQDGHTYDNDCWRQQAECRQQQTIPPKHQGPCDQTPSPCRGAQCAFGATC 481
Score = 57.8 bits (138), Expect = 2e-08
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 913 CRDVFCPGSSTCV--VDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATC 1086
CR + C + C V+ A CV +CP + +CG+D TYS+ C L++A C
Sbjct: 174 CRGMLCGFGAVCEPSVEDPGRASCVCKKNVCPAMVAP---VCGSDASTYSNECELQRAQC 230
Query: 1087 LLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCL 1182
R I L +G C C ++ C+ G C+
Sbjct: 231 NQQRRIRLLRQGPCGSRDPCANVTCSFGSTCV 262
Score = 56.2 bits (134), Expect = 5e-08
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Frame = +1
Query: 694 CENVDCGPG------------KKCRMN-------KKNKPRCVCAPDCSNITWKGPVCGLD 816
CE +CG G + CR + ++ P CVC C ++ K PVCG D
Sbjct: 666 CEPAECGSGGSGSGEDNACEQELCRQHGGVWDEDSEDGP-CVCDFSCQSVL-KSPVCGSD 723
Query: 817 GKTYRNECALLKARCKEQPELEVQYQGKCK 906
G TY EC L KARC+ + EL V QG C+
Sbjct: 724 GVTYSTECHLKKARCEARQELYVAAQGACR 753
Score = 55.8 bits (133), Expect = 7e-08
Identities = 47/163 (28%), Positives = 66/163 (40%), Gaps = 3/163 (1%)
Frame = +1
Query: 649 IFNGGAPNCIPCKETCENVDCGPGKKCRMN-KKNKPRCVCAPDCSNITWKGPVCGL--DG 819
I G C PC C P R + ++ C C P + GP CG DG
Sbjct: 838 IVTDGHSGCTPCS-------CDPRGAVRDDCEQMTGLCSCRPGVA-----GPKCGQCPDG 885
Query: 820 KTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRIC 999
+ AL C+ P V TC ++ C ++CV ++ A CV C
Sbjct: 886 Q------ALGHLGCEADPTTPV--------TCVEMHCEFGASCV-EEAGFAQCVCPTLTC 930
Query: 1000 PEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
PE S++ +CG+DGVTY + C L+ C I + G C
Sbjct: 931 PEANSTK--VCGSDGVTYGNECQLKTIACRQRLDISIQSLGPC 971
>ref|NP_032073.2| follistatin-related protein 1 precursor [Mus musculus].
Length = 306
Score = 72.4 bits (176), Expect = 7e-13
Identities = 35/91 (38%), Positives = 49/91 (53%)
Frame = +1
Query: 694 CENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQP 873
C NV CG G++C + +K +P C+C C K PVCG +GKTY N C L + C
Sbjct: 29 CANVFCGAGRECAVTEKGEPTCLCIEQCK--PHKRPVCGSNGKTYLNHCELHRDACLTGS 86
Query: 874 ELEVQYQGKCKKTCRDVFCPGSSTCVVDQTN 966
+++V Y G CK+ + P +S V Q N
Sbjct: 87 KIQVDYDGHCKE--KKSASPSASPVVCYQAN 115
Score = 52.8 bits (125), Expect = 6e-07
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +1
Query: 907 KTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATC 1086
K C +VFC C V + C+ + P ++ +CG++G TY + C L + C
Sbjct: 27 KICANVFCGAGRECAVTEKGEPTCLCIEQCKPH----KRPVCGSNGKTYLNHCELHRDAC 82
Query: 1087 LLGRSIGLAYEGKCIKAKS 1143
L G I + Y+G C + KS
Sbjct: 83 LTGSKIQVDYDGHCKEKKS 101
>ref|NP_062764.1| tomoregulin-2 precursor [Mus musculus].
Length = 374
Score = 68.6 bits (166), Expect = 1e-11
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Frame = +1
Query: 757 CVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKC----------- 903
CVC C++ PVCG +G++Y+NEC L +A CK+Q E+ V +G C
Sbjct: 89 CVCQFKCNSDYV--PVCGSNGESYQNECYLRQAACKQQSEILVVSEGSCATDTGSGSGDG 146
Query: 904 ----------KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTY 1053
K+T C + C D + +CV CN C + + LC +DG +Y
Sbjct: 147 VHEGSGETSQKETSTCDICQFGAECDED-AEDVWCV-CNIDCSQTNFNP--LCASDGKSY 202
Query: 1054 SSACHLRKATCLLGRSIGLAYEGKC 1128
+AC +++A+C I + G+C
Sbjct: 203 DNACQIKEASCQKQEKIEVMSLGRC 227
Score = 52.0 bits (123), Expect = 1e-06
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 685 KETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCK 864
KET C G +C + ++ CVC DCS + P+C DGK+Y N C + +A C+
Sbjct: 157 KETSTCDICQFGAECDEDAEDV-WCVCNIDCSQTNFN-PLCASDGKSYDNACQIKEASCQ 214
Query: 865 EQPELEVQYQGKCK 906
+Q ++EV G+C+
Sbjct: 215 KQEKIEVMSLGRCQ 228
>ref|NP_067411.1| tomoregulin-1 precursor [Mus musculus].
Length = 372
Score = 67.0 bits (162), Expect = 3e-11
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Frame = +1
Query: 694 CENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQP 873
C+ C G C+ + +C C C T PVCG +G TY+NEC L +A CK Q
Sbjct: 69 CDESSCKYGGVCKEDGDGL-KCACQFQCH--TNYIPVCGSNGDTYQNECFLRRAACKHQK 125
Query: 874 ELEVQYQGKC---------------------KKTCRDVFCPGSSTCVVDQTNNAYCVTCN 990
++ V +G C +K + C + C D N CV CN
Sbjct: 126 DITVVARGPCYSDNGSGSGEGEEEGSGAGAHRKHSKCGPCKYKAECDED-AENVGCV-CN 183
Query: 991 RICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGG 1170
C S +C +DG +Y++ C +R+A+C+ I + + G C +D+ G
Sbjct: 184 IDC--SGYSFNPVCASDGSSYNNPCFVREASCIKQEQIDIRHLGHC---TDTDDVSLLGK 238
Query: 1171 K 1173
K
Sbjct: 239 K 239
>ref|NP_033268.1| SPARC precursor [Mus musculus].
Length = 302
Score = 51.6 bits (122), Expect = 1e-06
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +1
Query: 913 CRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPTSSEQYLCGNDGVTYSSACHLRKATCL 1089
C++ C C +D++N CV + CP P + +C ND T+ S+CH C
Sbjct: 71 CQNHHCKHGKVCELDESNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 130
Query: 1090 L-----GRSIGLAYEGKCIKAKSCEDIQCT 1164
L G + L Y G C C D + T
Sbjct: 131 LEGTKKGHKLHLDYIGPCKYIAPCLDSELT 160
>ref|NP_034227.3| SPARC-like protein 1 precursor [Mus musculus].
Length = 650
Score = 51.2 bits (121), Expect = 2e-06
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Frame = +1
Query: 664 APNCIPCKE---------TCENVDCGPGKKCRMNKKNKPRCVC--APDCSNITWKGPVCG 810
+PN P E +C N C G C+ + + KP CVC C CG
Sbjct: 400 SPNAEPSDEGNSREHSAGSCTNFQCKRGHICKTDPQGKPHCVCQDPETCPPAKILDQACG 459
Query: 811 LDGKTYRNECALLKARC-----KEQPELEVQYQGKCKK--TCRD 921
D +TY + C L +C K+ +L++ Y G CK C D
Sbjct: 460 TDNQTYASSCHLFATKCRLEGTKKGHQLQLDYFGACKSIPACTD 503
>ref|NP_848788.2| follistatin-related protein 5 precursor [Mus musculus].
Length = 847
Score = 50.8 bits (120), Expect = 2e-06
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 691 TCENVDCGPGKKCRMNKKNK-PRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKE 867
+CEN CG G+ C +N++ + C C C PVCG DG+ Y N C + +A C +
Sbjct: 64 SCENKYCGLGRHCVINRETRHAECACMDLCKQ--HYKPVCGSDGEFYENHCEVHRAACLK 121
Query: 868 QPELEVQYQGKC 903
+ ++ + + C
Sbjct: 122 KQKITIVHNEDC 133
>ref|NP_071710.2| SPARC-related modular calcium-binding protein 2 precursor [Mus
musculus].
Length = 447
Score = 48.9 bits (115), Expect = 8e-06
Identities = 33/127 (25%), Positives = 51/127 (40%)
Frame = +1
Query: 763 CAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSS 942
C+ DC + K P+C DG+T+ + C +A+CK+ P+LE+ ++G CK R C
Sbjct: 40 CSLDCPSSPQK-PLCASDGRTFLSRCEFQRAKCKD-PQLEIAHRGNCKDVSR---CVAER 94
Query: 943 TCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEG 1122
+Q + PE C +DG CH C G G
Sbjct: 95 KYTQEQARKEFQQV---FIPE--------CNDDGTYSQVQCHSYTGYCWCVTPNGRPISG 143
Query: 1123 KCIKAKS 1143
+ K+
Sbjct: 144 TAVAHKT 150
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,820,713
Number of extensions: 1334405
Number of successful extensions: 5254
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 5117
Number of HSP's successfully gapped: 23
Length of query: 412
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 308
Effective length of database: 12,493,815
Effective search space: 3848095020
Effective search space used: 3848095020
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012230
(1236 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_037541.1| follistatin isoform FST344 precursor [Homo sapi... 543 e-159
Alignment gi|NP_006341.1| follistatin isoform FST317 precursor [Homo sapi... 543 e-159
Alignment gi|NP_005851.1| follistatin-related protein 3 precursor [Homo s... 231 1e-60
Alignment gi|NP_940978.2| agrin precursor [Homo sapiens]. 93 4e-19
Alignment gi|NP_009016.1| follistatin-related protein 1 precursor [Homo s... 73 5e-13
Alignment gi|NP_057276.2| tomoregulin-2 precursor [Homo sapiens]. 70 3e-12
Alignment gi|NP_003683.2| tomoregulin-1 precursor [Homo sapiens]. 69 1e-11
Alignment gi|NP_001185741.1| C9orf30-TMEFF1 fusion protein [Homo sapiens]. 67 3e-11
Alignment gi|NP_001121782.1| SPARC-like protein 1 precursor [Homo sapiens]. 54 4e-07
Alignment gi|NP_004675.3| SPARC-like protein 1 precursor [Homo sapiens]. 54 4e-07
>ref|NP_037541.1| follistatin isoform FST344 precursor [Homo sapiens].
Length = 344
Score = 543 bits (1398), Expect(2) = e-159
Identities = 244/257 (94%), Positives = 247/257 (96%)
Frame = +1
Query: 424 KHQPGGXXXXXXXXXQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 603
+HQPGG QFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS
Sbjct: 5 RHQPGGLCLLLLLLCQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 64
Query: 604 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 783
WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN
Sbjct: 65 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 124
Query: 784 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT 963
ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQG+CKKTCRDVFCPGSSTCVVDQT
Sbjct: 125 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQT 184
Query: 964 NNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS 1143
NNAYCVTCNRICPEP SSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS
Sbjct: 185 NNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS 244
Query: 1144 CEDIQCTGGKKCLWDFR 1194
CEDIQCTGGKKCLWDF+
Sbjct: 245 CEDIQCTGGKKCLWDFK 261
Score = 38.9 bits (89), Expect(2) = e-159
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3
Query: 1170 KKVLMGFQXXRGRCSLCDELCP 1235
KK L F+ RGRCSLCDELCP
Sbjct: 254 KKCLWDFKVGRGRCSLCDELCP 275
Score = 97.1 bits (240), Expect = 3e-20
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Frame = +1
Query: 682 CKETCENVDCGPGKKCRMNKKNKPRCV-----CAPDCSNITWKGPVCGLDGKTYRNECAL 846
CK+TC +V C C +++ N CV C S+ + +CG DG TY + C L
Sbjct: 164 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQY---LCGNDGVTYSSACHL 220
Query: 847 LKARCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVD-QTNNAYCVTCNRICPEPTSS 1017
KA C + + Y+GKC K+C D+ C G C+ D + C C+ +CP+ S
Sbjct: 221 RKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSD 280
Query: 1018 EQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
E +C +D TY+S C +++A C G + + + G C
Sbjct: 281 EP-VCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316
Score = 59.3 bits (142), Expect = 7e-09
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 673 CIPCKETCENVDCGPGKKCRMN-KKNKPRC-VCAPDCSNITWKGPVCGLDGKTYRNECAL 846
CI K +CE++ C GKKC + K + RC +C C + PVC D TY +ECA+
Sbjct: 239 CIKAK-SCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAM 297
Query: 847 LKARCKEQPELEVQYQGKCKKTCRD 921
+A C LEV++ G C D
Sbjct: 298 KEAACSSGVLLEVKHSGSCNSISED 322
>ref|NP_006341.1| follistatin isoform FST317 precursor [Homo sapiens].
Length = 317
Score = 543 bits (1398), Expect(2) = e-159
Identities = 244/257 (94%), Positives = 247/257 (96%)
Frame = +1
Query: 424 KHQPGGXXXXXXXXXQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 603
+HQPGG QFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS
Sbjct: 5 RHQPGGLCLLLLLLCQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTS 64
Query: 604 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 783
WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN
Sbjct: 65 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 124
Query: 784 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQT 963
ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQG+CKKTCRDVFCPGSSTCVVDQT
Sbjct: 125 ITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQT 184
Query: 964 NNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS 1143
NNAYCVTCNRICPEP SSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS
Sbjct: 185 NNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKS 244
Query: 1144 CEDIQCTGGKKCLWDFR 1194
CEDIQCTGGKKCLWDF+
Sbjct: 245 CEDIQCTGGKKCLWDFK 261
Score = 38.9 bits (89), Expect(2) = e-159
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3
Query: 1170 KKVLMGFQXXRGRCSLCDELCP 1235
KK L F+ RGRCSLCDELCP
Sbjct: 254 KKCLWDFKVGRGRCSLCDELCP 275
Score = 97.1 bits (240), Expect = 3e-20
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Frame = +1
Query: 682 CKETCENVDCGPGKKCRMNKKNKPRCV-----CAPDCSNITWKGPVCGLDGKTYRNECAL 846
CK+TC +V C C +++ N CV C S+ + +CG DG TY + C L
Sbjct: 164 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQY---LCGNDGVTYSSACHL 220
Query: 847 LKARCKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVD-QTNNAYCVTCNRICPEPTSS 1017
KA C + + Y+GKC K+C D+ C G C+ D + C C+ +CP+ S
Sbjct: 221 RKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSD 280
Query: 1018 EQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
E +C +D TY+S C +++A C G + + + G C
Sbjct: 281 EP-VCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316
Score = 57.8 bits (138), Expect = 2e-08
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 673 CIPCKETCENVDCGPGKKCRMN-KKNKPRC-VCAPDCSNITWKGPVCGLDGKTYRNECAL 846
CI K +CE++ C GKKC + K + RC +C C + PVC D TY +ECA+
Sbjct: 239 CIKAK-SCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAM 297
Query: 847 LKARCKEQPELEVQYQGKC 903
+A C LEV++ G C
Sbjct: 298 KEAACSSGVLLEVKHSGSC 316
>ref|NP_005851.1| follistatin-related protein 3 precursor [Homo sapiens].
Length = 263
Score = 231 bits (589), Expect = 1e-60
Identities = 101/214 (47%), Positives = 144/214 (67%), Gaps = 1/214 (0%)
Frame = +1
Query: 490 AQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAP 669
A G CWL+Q + C ++ +T++++ ECC++G + T+W+ N + ++ G
Sbjct: 33 APGGVCWLQQGQEATCSLVLQTDVTRAECCASGNIDTAWSNLTHPGNKIN--LLGFLGLV 90
Query: 670 NCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALL 849
+C+PCK++C+ V+CGPGK CRM +PRC CAPDCS + + VCG DG TYR+EC L
Sbjct: 91 HCLPCKDSCDGVECGPGKACRM-LGGRPRCECAPDCSGLPARLQVCGSDGATYRDECELR 149
Query: 850 KARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPTSSEQY 1026
ARC+ P+L V Y+G+C+K+C V CP +CVVDQT +A+CV C CP P+S Q
Sbjct: 150 AARCRGHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQE 209
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
LCGN+ VTY S+CH+R+ATC LGRSIG+ + G C
Sbjct: 210 LCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC 243
Score = 51.6 bits (122), Expect = 1e-06
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +1
Query: 901 CKKTCRDVFC-PGSSTCVVDQTNNAYCVT-CNRICPEPTSSEQYLCGNDGVTYSSACHLR 1074
CK +C V C PG + ++ C C+ + + +CG+DG TY C LR
Sbjct: 95 CKDSCDGVECGPGKACRMLGGRPRCECAPDCSGL-----PARLQVCGSDGATYRDECELR 149
Query: 1075 KATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWD-FRXAEAVVPSAMSC 1230
A C + + Y G+C KSCE + C + C+ D A VV A C
Sbjct: 150 AARCRGHPDLSVMYRGRC--RKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPC 200
>ref|NP_940978.2| agrin precursor [Homo sapiens].
Length = 2045
Score = 93.2 bits (230), Expect = 4e-19
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Frame = +1
Query: 694 CENVDCGPGKKCRMN-----KKNKPRCVCAPDCSNITWKG---PVCGLDGKTYRNECALL 849
C+ D P + CR N ++ +PRC C +T G PVC DG+TY ++C
Sbjct: 389 CQGRDQCP-EPCRFNAVCLSRRGRPRC----SCDRVTCDGAYRPVCAQDGRTYDSDCWRQ 443
Query: 850 KARCKEQPELEVQYQGKCKKT---CRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSE 1020
+A C++Q + ++QG C + C V C +TC V N C + C +S
Sbjct: 444 QAECRQQRAIPSKHQGPCDQAPSPCLGVQCAFGATCAVK--NGQAACECLQAC---SSLY 498
Query: 1021 QYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSC 1146
+CG+DGVTY SAC L C LGR I +A +G C + C
Sbjct: 499 DPVCGSDGVTYGSACELEATACTLGREIQVARKGPCDRCGQC 540
Score = 89.0 bits (219), Expect = 8e-18
Identities = 54/144 (37%), Positives = 67/144 (46%)
Frame = +1
Query: 709 CGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQ 888
CG + + + RCVC +C + PVCG DG TY +EC L C Q L V
Sbjct: 537 CGQCRFGALCEAETGRCVCPSEC--VALAQPVCGSDGHTYPSECMLHVHACTHQISLHVA 594
Query: 889 YQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACH 1068
G C+ TC D C + C Q C C P P +CG+DGVTY SAC
Sbjct: 595 SAGPCE-TCGDAVCAFGAVCSAGQ---CVCPRCEHPPPGP------VCGSDGVTYGSACE 644
Query: 1069 LRKATCLLGRSIGLAYEGKCIKAK 1140
LR+A CL I A G C +A+
Sbjct: 645 LREAACLQQTQIEEARAGPCEQAE 668
Score = 84.0 bits (206), Expect = 3e-16
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Frame = +1
Query: 688 ETCENVDCGPGKKCRMNKKNKPR--CVCAPD-CSNITWKGPVCGLDGKTYRNECALLKAR 858
+ C + CG G C N + R CVC C ++ PVCG D TY NEC L +A+
Sbjct: 170 DACRGMLCGFGAVCEPNAEGPGRASCVCKKSPCPSVV--APVCGSDASTYSNECELQRAQ 227
Query: 859 CKEQPELEVQYQGKC--KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPT--SSEQY 1026
C +Q + + +G C + C +V C STC +A +T + +CP + E
Sbjct: 228 CSQQRRIRLLSRGPCGSRDPCSNVTCSFGSTC----ARSADGLTASCLCPATCRGAPEGT 283
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
+CG+DG Y C L + C ++ ++G C
Sbjct: 284 VCGSDGADYPGECQLLRRACARQENVFKKFDGPC 317
Score = 82.0 bits (201), Expect = 1e-15
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Frame = +1
Query: 679 PCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR 858
PC ETC + C G C + PRC P GPVCG DG TY + C L +A
Sbjct: 598 PC-ETCGDAVCAFGAVCSAGQCVCPRCEHPP-------PGPVCGSDGVTYGSACELREAA 649
Query: 859 CKEQPELEVQYQGKCKKT--------------CRDVFCPGSSTCVVDQTNNAYCVTCNRI 996
C +Q ++E G C++ C C + + + CV C+
Sbjct: 650 CLQQTQIEEARAGPCEQAECGSGGSGSGEDGDCEQELCRQRGGIWDEDSEDGPCV-CDFS 708
Query: 997 CPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
C S +CG+DGVTYS+ C L+KA C R + +A +G C
Sbjct: 709 CQSVPGSP--VCGSDGVTYSTECELKKARCESQRGLYVAAQGAC 750
Score = 71.6 bits (174), Expect = 1e-12
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Frame = +1
Query: 679 PC--KETCENVDCGPGKKCRMNKKN-KPRCVCAPDCSNITWKGPVCGLDGKTYRNECALL 849
PC ++ C NV C G C + C+C C +G VCG DG Y EC LL
Sbjct: 241 PCGSRDPCSNVTCSFGSTCARSADGLTASCLCPATCRGAP-EGTVCGSDGADYPGECQLL 299
Query: 850 KARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVD-QTNNAYCVTCNRICPEPTSSEQY 1026
+ C Q + ++ G C C+ S +C V+ +T + CP + +
Sbjct: 300 RRACARQENVFKKFDGPC-DPCQGALPDPSRSCRVNPRTRRPEMLLRPESCP---ARQAP 355
Query: 1027 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCL 1182
+CG+DGVTY + C + ++ G + G+C C + C CL
Sbjct: 356 VCGDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRDQCPE-PCRFNAVCL 406
Score = 58.9 bits (141), Expect = 9e-09
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Frame = +1
Query: 649 IFNGGAPNCIPCKETCENVDCGPGKKCRMN-KKNKPRCVCAPDCSNITWKGPVCGL--DG 819
I G C PC C P R + ++ C C P + GP CG DG
Sbjct: 836 IVTDGRSGCTPCS-------CDPQGAVRDDCEQMTGLCSCKPGVA-----GPKCGQCPDG 883
Query: 820 KTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRIC 999
+ AL A C+ TC ++ C + CV +++ +A+CV C
Sbjct: 884 R------ALGPAGCEAD--------ASAPATCAEMRCEFGARCV-EESGSAHCVCPMLTC 928
Query: 1000 PEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKA 1137
PE +++ +CG+DGVTY + C L+ C G I + G C +A
Sbjct: 929 PEANATK--VCGSDGVTYGNECQLKTIACRQGLQISIQSLGPCQEA 972
Score = 53.9 bits (128), Expect = 3e-07
Identities = 52/193 (26%), Positives = 69/193 (35%), Gaps = 26/193 (13%)
Frame = +1
Query: 694 CENVDCGPG------------KKCRM-------NKKNKPRCVCAPDCSNITWKGPVCGLD 816
CE +CG G + CR + ++ P CVC C ++ PVCG D
Sbjct: 664 CEQAECGSGGSGSGEDGDCEQELCRQRGGIWDEDSEDGP-CVCDFSCQSVPGS-PVCGSD 721
Query: 817 GKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI 996
G TY EC L KARC+ Q L V QG C+ F P +
Sbjct: 722 GVTYSTECELKKARCESQRGLYVAAQGACR---GPTFAP-----------------LPPV 761
Query: 997 CPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAK-SCEDIQCTGGK 1173
P + Y C D +T + L + +Y G C A C GG
Sbjct: 762 APLHCAQTPYGCCQDNITAARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGL 821
Query: 1174 KC------LWDFR 1194
+C W+FR
Sbjct: 822 RCDRCEPGFWNFR 834
Score = 53.1 bits (126), Expect = 5e-07
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 913 CRDVFCPGSSTCV--VDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATC 1086
CR + C + C + A CV CP + +CG+D TYS+ C L++A C
Sbjct: 172 CRGMLCGFGAVCEPNAEGPGRASCVCKKSPCPSVVAP---VCGSDASTYSNECELQRAQC 228
Query: 1087 LLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFRXAEAVVPSAM 1224
R I L G C C ++ C+ G C R A+ + S +
Sbjct: 229 SQQRRIRLLSRGPCGSRDPCSNVTCSFGSTCA---RSADGLTASCL 271
>ref|NP_009016.1| follistatin-related protein 1 precursor [Homo sapiens].
Length = 308
Score = 73.2 bits (178), Expect = 5e-13
Identities = 35/91 (38%), Positives = 50/91 (54%)
Frame = +1
Query: 694 CENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQP 873
C NV CG G++C + +K +P C+C C K PVCG +GKTY N C L + C
Sbjct: 31 CANVFCGAGRECAVTEKGEPTCLCIEQCK--PHKRPVCGSNGKTYLNHCELHRDACLTGS 88
Query: 874 ELEVQYQGKCKKTCRDVFCPGSSTCVVDQTN 966
+++V Y G CK+ + P +S V Q+N
Sbjct: 89 KIQVDYDGHCKE--KKSVSPSASPVVCYQSN 117
Score = 52.8 bits (125), Expect = 7e-07
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +1
Query: 907 KTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATC 1086
K C +VFC C V + C+ + P ++ +CG++G TY + C L + C
Sbjct: 29 KICANVFCGAGRECAVTEKGEPTCLCIEQCKPH----KRPVCGSNGKTYLNHCELHRDAC 84
Query: 1087 LLGRSIGLAYEGKCIKAKS 1143
L G I + Y+G C + KS
Sbjct: 85 LTGSKIQVDYDGHCKEKKS 103
>ref|NP_057276.2| tomoregulin-2 precursor [Homo sapiens].
Length = 374
Score = 70.5 bits (171), Expect = 3e-12
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Frame = +1
Query: 757 CVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKC----------- 903
CVC C+N PVCG +G++Y+NEC L +A CK+Q E+ V +G C
Sbjct: 89 CVCQFKCNNDYV--PVCGSNGESYQNECYLRQAACKQQSEILVVSEGSCATDAGSGSGDG 146
Query: 904 ----------KKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTY 1053
K+T C + C D + +CV CN C + + LC +DG +Y
Sbjct: 147 VHEGSGETSQKETSTCDICQFGAECDED-AEDVWCV-CNIDCSQTNFNP--LCASDGKSY 202
Query: 1054 SSACHLRKATCLLGRSIGLAYEGKC 1128
+AC +++A+C I + G+C
Sbjct: 203 DNACQIKEASCQKQEKIEVMSLGRC 227
Score = 52.0 bits (123), Expect = 1e-06
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 685 KETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCK 864
KET C G +C + ++ CVC DCS + P+C DGK+Y N C + +A C+
Sbjct: 157 KETSTCDICQFGAECDEDAEDV-WCVCNIDCSQTNFN-PLCASDGKSYDNACQIKEASCQ 214
Query: 865 EQPELEVQYQGKCK 906
+Q ++EV G+C+
Sbjct: 215 KQEKIEVMSLGRCQ 228
>ref|NP_003683.2| tomoregulin-1 precursor [Homo sapiens].
Length = 380
Score = 68.6 bits (166), Expect = 1e-11
Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Frame = +1
Query: 658 GGAPNCIPCKE---------TCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCG 810
GG I C E C+ C G C+ + +C C C T PVCG
Sbjct: 56 GGKGKSINCSELNVRESDVRVCDESSCKYGGVCKEDGDGL-KCACQFQCH--TNYIPVCG 112
Query: 811 LDGKTYRNECALLKARCKEQPELEVQYQGKC---------------------KKTCRDVF 927
+G TY+NEC L +A CK Q E+ V +G C +K +
Sbjct: 113 SNGDTYQNECFLRRAACKHQKEITVIARGPCYSDNGSGSGEGEEEGSGAEVHRKHSKCGP 172
Query: 928 CPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIG 1107
C + C D N CV CN C S +C +DG +Y++ C +R+A+C+ I
Sbjct: 173 CKYKAECDED-AENVGCV-CNIDC--SGYSFNPVCASDGSSYNNPCFVREASCIKQEQID 228
Query: 1108 LAYEGKC 1128
+ + G C
Sbjct: 229 IRHLGHC 235
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 709 CGPGK---KCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPEL 879
CGP K +C + +N CVC DCS ++ PVC DG +Y N C + +A C +Q ++
Sbjct: 170 CGPCKYKAECDEDAENVG-CVCNIDCSGYSFN-PVCASDGSSYNNPCFVREASCIKQEQI 227
Query: 880 EVQYQGKCKKT 912
++++ G C T
Sbjct: 228 DIRHLGHCTDT 238
>ref|NP_001185741.1| C9orf30-TMEFF1 fusion protein [Homo sapiens].
Length = 454
Score = 67.0 bits (162), Expect = 3e-11
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Frame = +1
Query: 694 CENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQP 873
C+ C G C+ + +C C C T PVCG +G TY+NEC L +A CK Q
Sbjct: 151 CDESSCKYGGVCKEDGDGL-KCACQFQCH--TNYIPVCGSNGDTYQNECFLRRAACKHQK 207
Query: 874 ELEVQYQGKC---------------------KKTCRDVFCPGSSTCVVDQTNNAYCVTCN 990
E+ V +G C +K + C + C D N CV CN
Sbjct: 208 EITVIARGPCYSDNGSGSGEGEEEGSGAEVHRKHSKCGPCKYKAECDED-AENVGCV-CN 265
Query: 991 RICPEPTSSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 1128
C S +C +DG +Y++ C +R+A+C+ I + + G C
Sbjct: 266 IDC--SGYSFNPVCASDGSSYNNPCFVREASCIKQEQIDIRHLGHC 309
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 709 CGPGK---KCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPEL 879
CGP K +C + +N CVC DCS ++ PVC DG +Y N C + +A C +Q ++
Sbjct: 244 CGPCKYKAECDEDAENVG-CVCNIDCSGYSFN-PVCASDGSSYNNPCFVREASCIKQEQI 301
Query: 880 EVQYQGKCKKT 912
++++ G C T
Sbjct: 302 DIRHLGHCTDT 312
>ref|NP_001121782.1| SPARC-like protein 1 precursor [Homo sapiens].
Length = 664
Score = 53.5 bits (127), Expect = 4e-07
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +1
Query: 910 TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCL 1089
+C C C DQ +CV + + PT +CG D TY+S+CHL C
Sbjct: 432 SCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKPLDQVCGTDNQTYASSCHLFATKCR 491
Query: 1090 L-----GRSIGLAYEGKCIKAKSCEDIQ 1158
L G + L Y G C +C D +
Sbjct: 492 LEGTKKGHQLQLDYFGACKSIPTCTDFE 519
Score = 53.1 bits (126), Expect = 5e-07
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Frame = +1
Query: 688 ETCENVDCGPGKKCRMNKKNKPRCVCAP--DCSNITWKGPVCGLDGKTYRNECALLKARC 861
++C + C G C+ +++ KP CVC C VCG D +TY + C L +C
Sbjct: 431 DSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKPLDQVCGTDNQTYASSCHLFATKC 490
Query: 862 -----KEQPELEVQYQGKCKK--TCRD 921
K+ +L++ Y G CK TC D
Sbjct: 491 RLEGTKKGHQLQLDYFGACKSIPTCTD 517
>ref|NP_004675.3| SPARC-like protein 1 precursor [Homo sapiens].
Length = 664
Score = 53.5 bits (127), Expect = 4e-07
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +1
Query: 910 TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPTSSEQYLCGNDGVTYSSACHLRKATCL 1089
+C C C DQ +CV + + PT +CG D TY+S+CHL C
Sbjct: 432 SCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKPLDQVCGTDNQTYASSCHLFATKCR 491
Query: 1090 L-----GRSIGLAYEGKCIKAKSCEDIQ 1158
L G + L Y G C +C D +
Sbjct: 492 LEGTKKGHQLQLDYFGACKSIPTCTDFE 519
Score = 53.1 bits (126), Expect = 5e-07
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Frame = +1
Query: 688 ETCENVDCGPGKKCRMNKKNKPRCVCAP--DCSNITWKGPVCGLDGKTYRNECALLKARC 861
++C + C G C+ +++ KP CVC C VCG D +TY + C L +C
Sbjct: 431 DSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKPLDQVCGTDNQTYASSCHLFATKC 490
Query: 862 -----KEQPELEVQYQGKCKK--TCRD 921
K+ +L++ Y G CK TC D
Sbjct: 491 RLEGTKKGHQLQLDYFGACKSIPTCTD 517
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 52,117,558
Number of extensions: 1609820
Number of successful extensions: 6223
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 6119
Number of HSP's successfully gapped: 34
Length of query: 412
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 307
Effective length of database: 14,835,944
Effective search space: 4554634808
Effective search space used: 4554634808
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012230
(1236 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr16 513 e-143
>Sscrofa_Chr16
|| Length = 86898991
Score = 513 bits (259), Expect = e-143
Identities = 259/259 (100%)
Strand = Plus / Plus
Query: 1 gaactcggcgataccctcctgccgctttgatttcgggcacctccaccagataattgggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34778634 gaactcggcgataccctcctgccgctttgatttcgggcacctccaccagataattgggaa 34778693
Query: 61 gggtttccagaaggtgggaaatgtcacctgattcacactgaacttttaaaagctccccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34778694 gggtttccagaaggtgggaaatgtcacctgattcacactgaacttttaaaagctccccac 34778753
Query: 121 ccccaaggagccgcgcacaccctcgctcgaggccgccctcccactgccccacacactggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34778754 ccccaaggagccgcgcacaccctcgctcgaggccgccctcccactgccccacacactggg 34778813
Query: 181 agaccgcccaccgcaaaccgcggagacccccgtctagatttaaagcgcggctgcgcccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34778814 agaccgcccaccgcaaaccgcggagacccccgtctagatttaaagcgcggctgcgcccgg 34778873
Query: 241 cttctgacgtccattgaat 259
|||||||||||||||||||
Sbjct: 34778874 cttctgacgtccattgaat 34778892
Score = 446 bits (225), Expect = e-122
Identities = 225/225 (100%)
Strand = Plus / Plus
Query: 908 agacctgtcgggatgttttctgtccaggcagctccacatgtgtggtggaccagactaata 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34782161 agacctgtcgggatgttttctgtccaggcagctccacatgtgtggtggaccagactaata 34782220
Query: 968 atgcctactgtgtgacatgtaaccgcatttgcccagagcccacctcctcagaacagtatc 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34782221 atgcctactgtgtgacatgtaaccgcatttgcccagagcccacctcctcagaacagtatc 34782280
Query: 1028 tctgtgggaatgatggagtgacctactccagtgcctgtcacctgagaaaggctacctgcc 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34782281 tctgtgggaatgatggagtgacctactccagtgcctgtcacctgagaaaggctacctgcc 34782340
Query: 1088 tactgggcagatctattggattggcctatgagggaaagtgtatca 1132
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34782341 tactgggcagatctattggattggcctatgagggaaagtgtatca 34782385
Score = 430 bits (217), Expect = e-118
Identities = 220/221 (99%)
Strand = Plus / Plus
Query: 687 agaaacgtgcgagaacgtggactgtgggcccgggaaaaaatgccgaatgaacaagaagaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34781638 agaaacgtgcgagaacgtggactgtgggcccgggaaaaaatgccgaatgaacaagaagaa 34781697
Query: 747 caaaccccgctgcgtctgcgccccggattgttctaacatcacctggaaaggcccagtctg 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34781698 caaaccccgctgcgtctgcgccccggattgttctaacatcacctggaaaggcccagtctg 34781757
Query: 807 tgggctggatgggaaaacctaccgcaacgaatgtgctctcctcaaggccagatgtaaaga 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34781758 tgggctggatgggaaaacctaccgcaacgaatgtgctctcctcaaggccagatgtaaaga 34781817
Query: 867 acagccggaactggaagtccagtaccaaggcaaatgtaaaa 907
||||||||||||||||||||||||||||||||||||||||
Sbjct: 34781818 gcagccggaactggaagtccagtaccaaggcaaatgtaaaa 34781858
Score = 375 bits (189), Expect = e-101
Identities = 192/193 (99%)
Strand = Plus / Plus
Query: 496 gctgggaattgctggctccgccaagcaaaaaacggccgctgccaggtcctgtataaaacc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34781010 gctgggaattgctggctccgccaagcaaaaaacggccgctgccaggtcctgtataaaacc 34781069
Query: 556 gaactgagcaaggaggagtgctgcagcaccggccgcctgagcacctcctggactgaggag 615
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 34781070 gaactgagcaaggaggagtgctgcagcaccggccgcctgagcacctcctggaccgaggag 34781129
Query: 616 gacgtaaatgacaacacacttttcaagtggatgattttcaatggaggtgcccccaactgc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34781130 gacgtaaatgacaacacacttttcaagtggatgattttcaatggaggtgcccccaactgc 34781189
Query: 676 atcccatgtaaag 688
|||||||||||||
Sbjct: 34781190 atcccatgtaaag 34781202
Score = 206 bits (104), Expect = 2e-50
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 393 tcccgcgcctgaccccagaatggtccgtcccaagcaccagcccggcgggctatgcctcct 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34779026 tcccgcgcctgaccccagaatggtccgtcccaagcaccagcccggcgggctatgcctcct 34779085
Query: 453 gctgctgctgctctgccagttcatggaggaccgcagcgcccagg 496
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34779086 gctgctgctgctctgccagttcatggaggaccgcagcgcccagg 34779129
Score = 172 bits (87), Expect = 3e-40
Identities = 101/105 (96%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 1133 aagcaaagtcctgtgaagacatccagtgcactggtggaaaaaagtgcttatgggatttc- 1191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34783036 aagcaaagtcctgtgaagacatccagtgcactggtggaaaaaagtgcttatgggatttca 34783095
Query: 1192 aggntngcagaggccgttgttccctctgcgatgagctgtgccctg 1236
||| | |||||||||| ||||||||||||||||||||||||||||
Sbjct: 34783096 aggttggcagaggccgctgttccctctgcgatgagctgtgccctg 34783140
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 31,156,964
Number of extensions: 200
Number of successful extensions: 200
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 199
Number of HSP's successfully gapped: 6
Length of query: 1236
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1215
Effective length of database: 2,808,413,156
Effective search space: 3412221984540
Effective search space used: 3412221984540
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)