Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012523
(747 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003241.1| WAP four-disulfide core domain protein 2 pre... 59 6e-09
Alignment gi|XP_853595.1| PREDICTED: similar to Anosmin 1 precursor (Kall... 57 1e-08
Alignment gi|XP_853695.1| PREDICTED: similar to WAP four-disulfide core d... 55 9e-08
Alignment gi|NP_001106642.1| secretory leukocyte peptidase inhibitor [Can... 53 3e-07
Alignment gi|XP_534437.2| PREDICTED: similar to WAP four-disulfide core d... 49 5e-06
>ref|NP_001003241.1| WAP four-disulfide core domain protein 2 precursor [Canis lupus
familiaris].
Length = 124
Score = 58.5 bits (140), Expect = 6e-09
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +2
Query: 239 CVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKG--TIGLCAEFCSGD 412
C +C +C ++C GC IC + + G CP + +GLC + C D
Sbjct: 45 CTQECVSDAQCADNLKCCQAGCATICHLPNE----KEGSCPQVNTDFPQLGLCQDQCQVD 100
Query: 413 DSCPSGQKCCSNGCGH-SCQTAV 478
CP KCC NGCG SC T +
Sbjct: 101 SHCPGLLKCCYNGCGKVSCVTPI 123
>ref|XP_853595.1| PREDICTED: similar to Anosmin 1 precursor (Kallmann syndrome
protein) (Adhesion molecule-like X-linked) [Canis
familiaris].
Length = 713
Score = 57.4 bits (137), Expect = 1e-08
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Frame = +2
Query: 239 CVDQCQRHWE---------CGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPK--GTIG 385
C++ C+ W+ C P + C C + + + G CP K G
Sbjct: 86 CLEPCKESWDLRKQQCQSFCEPLFPKKNYECLTSCEFLKYILSVKQGDCPAPEKASGFAA 145
Query: 386 LCAEFCSGDDSCPSGQKCCSNGCGHSCQ 469
C E C D+ C +KCCSNGCGH+CQ
Sbjct: 146 ACVESCEADNECSGVKKCCSNGCGHTCQ 173
>ref|XP_853695.1| PREDICTED: similar to WAP four-disulfide core domain 5 precursor
[Canis familiaris].
Length = 111
Score = 54.7 bits (130), Expect = 9e-08
Identities = 25/91 (27%), Positives = 34/91 (37%)
Frame = +2
Query: 206 CSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIG 385
C P P + D C +C RM+C S C C P + +PG CP +
Sbjct: 22 CPPDDGPCLLSVPDHCMDDSQCPARMKCCSKACFRQCVP---MISVKPGSCPEDRLQCLS 78
Query: 386 LCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
C D C +CC CG C+ +
Sbjct: 79 PVQHLCHKDADCRGSSRCCLGACGRDCRNPI 109
>ref|NP_001106642.1| secretory leukocyte peptidase inhibitor [Canis lupus familiaris].
Length = 130
Score = 53.1 bits (126), Expect = 3e-07
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHICSP---AQDQVEQRPGKCPVLPKGTIGLCA-----EFC 403
+C+ W+C R C S CG C + + +PG+CPV+ G C C
Sbjct: 50 ECRSDWQCPGRQICCSHACGIKCLDPVNVSNSIRMKPGRCPVV----YGQCLMLNPPNHC 105
Query: 404 SGDDSCPSGQKCCSNGCGHSC 466
D C S KCC CG +C
Sbjct: 106 ETDRQCVSNLKCCKGMCGKAC 126
>ref|XP_534437.2| PREDICTED: similar to WAP four-disulfide core domain protein 8
precursor (Putative protease inhibitor WAP8) [Canis
familiaris].
Length = 260
Score = 48.9 bits (115), Expect = 5e-06
Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 5/125 (4%)
Frame = +2
Query: 107 RPVKFPGLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGI-----CVDQCQRHWEC 271
+P K+ G C GN + R C V Q P+ C C+ +C
Sbjct: 140 KPFKYGG-----CYGNANNFISRGNCRVACSSVVKTGQCPLFPFKNRMECPASCKGDMDC 194
Query: 272 GPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNG 451
+C + CG +C+ A + G CP P + C D CP QKCCS+
Sbjct: 195 PKSDKCCESMCGFVCAKAWTV---KSGFCPRKPLMCSKIERPKCLQDRDCPVSQKCCSH- 250
Query: 452 CGHSC 466
CG C
Sbjct: 251 CGLKC 255
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 31,090,097
Number of extensions: 891585
Number of successful extensions: 3563
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3531
Number of HSP's successfully gapped: 5
Length of query: 249
Length of database: 18,874,504
Length adjustment: 100
Effective length of query: 149
Effective length of database: 15,540,904
Effective search space: 2315594696
Effective search space used: 2315594696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Animal-Genome cDNA 20110601C-012523
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012523
(747 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002695690.1| PREDICTED: hypothetical protein [Bos taurus]. 192 2e-49
Alignment gi|XP_593741.4| PREDICTED: hypothetical protein [Bos taurus]. 192 2e-49
Alignment gi|XP_002695670.1| PREDICTED: extracellular peptidase inhibitor... 86 4e-17
Alignment gi|XP_002702143.1| PREDICTED: mCG55370-like [Bos taurus]. 86 4e-17
Alignment gi|NP_001192207.1| extracellular peptidase inhibitor [Bos tauru... 82 6e-16
Alignment gi|XP_002692529.1| PREDICTED: WAP four-disulfide core domain 3 ... 65 8e-11
Alignment gi|XP_001789331.1| PREDICTED: WAP four-disulfide core domain 3 ... 65 8e-11
Alignment gi|NP_001069958.1| WAP four-disulfide core domain protein 2 [Bo... 64 2e-10
Alignment gi|XP_590087.3| PREDICTED: secretory leukocyte peptidase inhibi... 63 2e-10
Alignment gi|XP_002692520.1| PREDICTED: secretory leukocyte peptidase inh... 62 4e-10
>ref|XP_002695690.1| PREDICTED: hypothetical protein [Bos taurus].
Length = 431
Score = 192 bits (489), Expect = 2e-49
Identities = 84/130 (64%), Positives = 96/130 (73%)
Frame = +2
Query: 125 GLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGC 304
G+CV RCRG+WDCGAGE CIR+GC R+CSP + VGIC+DQCQ H +C RCVS GC
Sbjct: 304 GICVQRCRGHWDCGAGERCIRRGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGC 363
Query: 305 GHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAVPD 484
G +CSP QD+ EQRPG CP +P+G G CAE C+GD SCP GQKCCSNGCG SCQ VPD
Sbjct: 364 GRVCSPTQDRQEQRPGTCPRVPEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSCQ--VPD 421
Query: 485 EKTFPSRLDD 514
F LDD
Sbjct: 422 -LDFTISLDD 430
Score = 113 bits (282), Expect = 2e-25
Identities = 59/177 (33%), Positives = 81/177 (45%), Gaps = 50/177 (28%)
Frame = +2
Query: 95 QAAVRPVKFPGLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPV--------------- 229
Q P+ G+CV++CR + DC AGE+CI GCG VCSP +
Sbjct: 88 QRVCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGRG 147
Query: 230 -----------------VGICVDQCQRHWECGPRMRCVSTGCGHICSP-----------A 325
VG+CV+QC+ +C +CVS GCGH+CSP +
Sbjct: 148 KQCVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQATICSRECS 207
Query: 326 QDQVEQRPGKC-------PVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTA 475
+D+ R +C P ++G+C E C D C +G+KC SNGCGH C A
Sbjct: 208 EDRDCGRGKQCVQDGCRRVCSPLMSVGVCVEQCREDRDCAAGEKCVSNGCGHVCSPA 264
Score = 110 bits (276), Expect = 1e-24
Identities = 57/164 (34%), Positives = 78/164 (47%), Gaps = 50/164 (30%)
Frame = +2
Query: 125 GLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPV------------------------- 229
G+CV++CR + DC AGE+CI GCG VCSPA +
Sbjct: 30 GVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQATICSLECSEDRDCGRGKQCVQDGCQR 89
Query: 230 -------VGICVDQCQRHWECGPRMRCVSTGCGHICSP-----------AQDQVEQRPGK 355
VGICV+QC+ +C +C+S GCGH+CSP ++D+ R +
Sbjct: 90 VCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGRGKQ 149
Query: 356 C-------PVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSC 466
C P ++G+C E C D C +G+KC SNGCGH C
Sbjct: 150 CVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVC 193
Score = 98.2 bits (243), Expect = 6e-21
Identities = 47/122 (38%), Positives = 64/122 (52%)
Frame = +2
Query: 110 PVKFPGLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRC 289
PV +C C + DCG G++C++ GC RVCSP VG+CV+QC+ +C +C
Sbjct: 195 PVPQATICSRECSEDRDCGRGKQCVQDGCRRVCSPLMS--VGVCVEQCREDRDCAAGEKC 252
Query: 290 VSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQ 469
VS GCGH+CSPA P+ +I C C D C +G++C S GC C
Sbjct: 253 VSNGCGHVCSPA--------------PQASI--CEFQCFRDRDCGAGRQCVSEGCNRVCS 296
Query: 470 TA 475
A
Sbjct: 297 PA 298
Score = 47.8 bits (112), Expect = 1e-05
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2
Query: 380 IGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTA 475
IG+C E C D C +G+KC SNGCGH C A
Sbjct: 29 IGVCVEQCREDQDCVAGEKCISNGCGHVCSPA 60
>ref|XP_593741.4| PREDICTED: hypothetical protein [Bos taurus].
Length = 431
Score = 192 bits (489), Expect = 2e-49
Identities = 84/130 (64%), Positives = 96/130 (73%)
Frame = +2
Query: 125 GLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGC 304
G+CV RCRG+WDCGAGE CIR+GC R+CSP + VGIC+DQCQ H +C RCVS GC
Sbjct: 304 GICVQRCRGHWDCGAGERCIRRGCSRICSPVRTAGVGICLDQCQGHRDCPAGSRCVSNGC 363
Query: 305 GHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAVPD 484
G +CSP QD+ EQRPG CP +P+G G CAE C+GD SCP GQKCCSNGCG SCQ VPD
Sbjct: 364 GRVCSPTQDRQEQRPGTCPRVPEGMFGTCAERCTGDGSCPPGQKCCSNGCGKSCQ--VPD 421
Query: 485 EKTFPSRLDD 514
F LDD
Sbjct: 422 -LDFTISLDD 430
Score = 113 bits (282), Expect = 2e-25
Identities = 59/177 (33%), Positives = 81/177 (45%), Gaps = 50/177 (28%)
Frame = +2
Query: 95 QAAVRPVKFPGLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPV--------------- 229
Q P+ G+CV++CR + DC AGE+CI GCG VCSP +
Sbjct: 88 QRVCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGRG 147
Query: 230 -----------------VGICVDQCQRHWECGPRMRCVSTGCGHICSP-----------A 325
VG+CV+QC+ +C +CVS GCGH+CSP +
Sbjct: 148 KQCVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVCSPVPQATICSRECS 207
Query: 326 QDQVEQRPGKC-------PVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTA 475
+D+ R +C P ++G+C E C D C +G+KC SNGCGH C A
Sbjct: 208 EDRDCGRGKQCVQDGCRRVCSPLMSVGVCVEQCREDRDCAAGEKCVSNGCGHVCSPA 264
Score = 110 bits (276), Expect = 1e-24
Identities = 57/164 (34%), Positives = 78/164 (47%), Gaps = 50/164 (30%)
Frame = +2
Query: 125 GLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPV------------------------- 229
G+CV++CR + DC AGE+CI GCG VCSPA +
Sbjct: 30 GVCVEQCREDQDCVAGEKCISNGCGHVCSPAPQATICSLECSEDRDCGRGKQCVQDGCQR 89
Query: 230 -------VGICVDQCQRHWECGPRMRCVSTGCGHICSP-----------AQDQVEQRPGK 355
VGICV+QC+ +C +C+S GCGH+CSP ++D+ R +
Sbjct: 90 VCSPLMSVGICVEQCREDQDCAAGEKCISNGCGHVCSPVPQATICSLECSEDRDCGRGKQ 149
Query: 356 C-------PVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSC 466
C P ++G+C E C D C +G+KC SNGCGH C
Sbjct: 150 CVQDGCQRVCSPLMSVGVCVEQCREDQDCAAGEKCVSNGCGHVC 193
Score = 98.2 bits (243), Expect = 6e-21
Identities = 47/122 (38%), Positives = 64/122 (52%)
Frame = +2
Query: 110 PVKFPGLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRC 289
PV +C C + DCG G++C++ GC RVCSP VG+CV+QC+ +C +C
Sbjct: 195 PVPQATICSRECSEDRDCGRGKQCVQDGCRRVCSPLMS--VGVCVEQCREDRDCAAGEKC 252
Query: 290 VSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQ 469
VS GCGH+CSPA P+ +I C C D C +G++C S GC C
Sbjct: 253 VSNGCGHVCSPA--------------PQASI--CEFQCFRDRDCGAGRQCVSEGCNRVCS 296
Query: 470 TA 475
A
Sbjct: 297 PA 298
Score = 47.8 bits (112), Expect = 1e-05
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +2
Query: 380 IGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTA 475
IG+C E C D C +G+KC SNGCGH C A
Sbjct: 29 IGVCVEQCREDQDCVAGEKCISNGCGHVCSPA 60
>ref|XP_002695670.1| PREDICTED: extracellular peptidase inhibitor-like [Bos taurus].
Length = 146
Score = 85.5 bits (210), Expect = 4e-17
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2
Query: 338 EQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
+Q G CP +PKGT+G+C E CSGDDSCP G KCCSNGCGH C+TAV
Sbjct: 30 QQELGFCPEVPKGTVGICVEMCSGDDSCPEGMKCCSNGCGHVCKTAV 76
>ref|XP_002702143.1| PREDICTED: mCG55370-like [Bos taurus].
Length = 93
Score = 85.5 bits (210), Expect = 4e-17
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2
Query: 338 EQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
+Q G CP +PKGT+G+C E CSGDDSCP G KCCSNGCGH C+TAV
Sbjct: 30 QQELGFCPEVPKGTVGICVEMCSGDDSCPEGMKCCSNGCGHVCKTAV 76
>ref|NP_001192207.1| extracellular peptidase inhibitor [Bos taurus].
Length = 93
Score = 81.6 bits (200), Expect = 6e-16
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +2
Query: 317 SPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
SP + Q ++PG CP +PKGT+G+CAE CSGD SCP KCCSNGCGH C+ AV
Sbjct: 25 SPVKGQ--RKPGFCPEVPKGTVGICAELCSGDYSCPGRAKCCSNGCGHVCKAAV 76
>ref|XP_002692529.1| PREDICTED: WAP four-disulfide core domain 3 [Bos taurus].
Length = 197
Score = 64.7 bits (156), Expect = 8e-11
Identities = 31/81 (38%), Positives = 39/81 (48%)
Frame = +2
Query: 239 CVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDS 418
C + C C +C STGCGH C D G CP K +GLC C D++
Sbjct: 110 CEELCDGDTSCPQGHKCCSTGCGHACFG--DIKGGWDGDCP---KALVGLCIVNCMVDEN 164
Query: 419 CPSGQKCCSNGCGHSCQTAVP 481
C +G+KCC +GCG C P
Sbjct: 165 CQAGEKCCKSGCGRFCVPPSP 185
Score = 55.5 bits (132), Expect = 5e-08
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +2
Query: 350 GKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSC 466
G+CP P C E C GD SCP G KCCS GCGH+C
Sbjct: 101 GECPADPLP----CEELCDGDTSCPQGHKCCSTGCGHAC 135
Score = 50.1 bits (118), Expect = 2e-06
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Frame = +2
Query: 131 CVDRCRGNWDCGAGEECIRKGCGRVC---------SPAQEPVVGICVDQCQRHWECGPRM 283
C + C G+ C G +C GCG C + +VG+C+ C C
Sbjct: 110 CEELCDGDTSCPQGHKCCSTGCGHACFGDIKGGWDGDCPKALVGLCIVNCMVDENCQAGE 169
Query: 284 RCVSTGCGHICSP 322
+C +GCG C P
Sbjct: 170 KCCKSGCGRFCVP 182
>ref|XP_001789331.1| PREDICTED: WAP four-disulfide core domain 3 [Bos taurus].
Length = 197
Score = 64.7 bits (156), Expect = 8e-11
Identities = 31/81 (38%), Positives = 39/81 (48%)
Frame = +2
Query: 239 CVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDS 418
C + C C +C STGCGH C D G CP K +GLC C D++
Sbjct: 110 CEELCDGDTSCPQGHKCCSTGCGHACFG--DIKGGWDGDCP---KALVGLCIVNCMVDEN 164
Query: 419 CPSGQKCCSNGCGHSCQTAVP 481
C +G+KCC +GCG C P
Sbjct: 165 CQAGEKCCKSGCGRFCVPPSP 185
Score = 55.5 bits (132), Expect = 5e-08
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +2
Query: 350 GKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSC 466
G+CP P C E C GD SCP G KCCS GCGH+C
Sbjct: 101 GECPADPLP----CEELCDGDTSCPQGHKCCSTGCGHAC 135
Score = 50.1 bits (118), Expect = 2e-06
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Frame = +2
Query: 131 CVDRCRGNWDCGAGEECIRKGCGRVC---------SPAQEPVVGICVDQCQRHWECGPRM 283
C + C G+ C G +C GCG C + +VG+C+ C C
Sbjct: 110 CEELCDGDTSCPQGHKCCSTGCGHACFGDIKGGWDGDCPKALVGLCIVNCMVDENCQAGE 169
Query: 284 RCVSTGCGHICSP 322
+C +GCG C P
Sbjct: 170 KCCKSGCGRFCVP 182
>ref|NP_001069958.1| WAP four-disulfide core domain protein 2 [Bos taurus].
Length = 123
Score = 63.5 bits (153), Expect = 2e-10
Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +2
Query: 239 CVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKG--TIGLCAEFCSGD 412
C C +C ++C GC +C D +PG CP + +GLC + C D
Sbjct: 44 CTKACVLDEDCDDNLKCCQAGCATVCQMPND----KPGSCPNVDIAFPQLGLCRDQCQVD 99
Query: 413 DSCPSGQKCCSNGCGH-SCQTAV 478
CP KCC NGCG SC T V
Sbjct: 100 SQCPDALKCCVNGCGRVSCVTPV 122
Score = 48.1 bits (113), Expect = 8e-06
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Frame = +2
Query: 101 AVRPVKFPGL-----CVDRCRGNWDCGAGEECIRKGCGRVCSPAQE------------PV 229
AV+P + P L C C + DC +C + GC VC + P
Sbjct: 29 AVKPGECPELEGDANCTKACVLDEDCDDNLKCCQAGCATVCQMPNDKPGSCPNVDIAFPQ 88
Query: 230 VGICVDQCQRHWECGPRMRCVSTGCGHI 313
+G+C DQCQ +C ++C GCG +
Sbjct: 89 LGLCRDQCQVDSQCPDALKCCVNGCGRV 116
>ref|XP_590087.3| PREDICTED: secretory leukocyte peptidase inhibitor [Bos taurus].
Length = 141
Score = 63.2 bits (152), Expect = 2e-10
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHICSPAQDQ---VEQRPGKCPVLPKGTIGLC-----AEFC 403
+C W+C + +C CG C D V+ PGKCPV+ G C + C
Sbjct: 51 ECHSDWQCPKKQKCCQDVCGIKCMDPVDTSKPVKVTPGKCPVVT----GHCESHKHVDDC 106
Query: 404 SGDDSCPSGQKCCSNGCGHSCQTAVPDEKTFPSRL 508
D C +G KCCS CG+SC V D TFP ++
Sbjct: 107 QNDSHCLNGFKCCSGPCGNSCVLPVKD-STFPGQI 140
>ref|XP_002692520.1| PREDICTED: secretory leukocyte peptidase inhibitor-like [Bos
taurus].
Length = 141
Score = 62.4 bits (150), Expect = 4e-10
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHICSPAQDQ---VEQRPGKCPVLPKGTIGLC-----AEFC 403
+C W+C + +C CG C D V+ PGKCPV+ G C + C
Sbjct: 51 ECHSDWQCPKKQKCCQDVCGIKCMDPVDTSKPVKVTPGKCPVVT----GHCESHKHVDDC 106
Query: 404 SGDDSCPSGQKCCSNGCGHSCQTAVPDEKTFPSR 505
D C +G KCCS CG+SC V D TFP +
Sbjct: 107 QNDSHCLNGFKCCSGPCGNSCVLPVKD-STFPGQ 139
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 30,000,630
Number of extensions: 892542
Number of successful extensions: 3517
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 3395
Number of HSP's successfully gapped: 33
Length of query: 249
Length of database: 17,681,374
Length adjustment: 100
Effective length of query: 149
Effective length of database: 14,372,574
Effective search space: 2141513526
Effective search space used: 2141513526
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012523
(747 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999112.1| WAP four-disulfide core domain protein 2 precur... 60 1e-09
Alignment gi|XP_001928820.2| PREDICTED: WAP four-disulfide core domain pr... 60 1e-09
Alignment gi|XP_003134513.1| PREDICTED: antileukoproteinase-like [Sus scr... 59 3e-09
Alignment gi|XP_001925105.2| PREDICTED: anosmin-1 [Sus scrofa]. 56 2e-08
Alignment gi|XP_003361368.1| PREDICTED: WAP four-disulfide core domain pr... 54 1e-07
Alignment gi|XP_003360055.1| PREDICTED: WAP four-disulfide core domain pr... 54 1e-07
Alignment gi|XP_003360057.1| PREDICTED: antileukoproteinase-like isoform ... 51 8e-07
Alignment gi|XP_003134512.1| PREDICTED: antileukoproteinase-like isoform ... 51 8e-07
Alignment gi|XP_003360056.1| PREDICTED: antileukoproteinase-like isoform ... 51 8e-07
Alignment gi|NP_999035.1| antileukoproteinase [Sus scrofa]. 49 4e-06
>ref|NP_999112.1| WAP four-disulfide core domain protein 2 precursor [Sus scrofa].
Length = 123
Score = 60.5 bits (145), Expect = 1e-09
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +2
Query: 239 CVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKG--TIGLCAEFCSGD 412
C +C +C ++C GC IC ++ G CP + +GLC + C D
Sbjct: 44 CTQECLSDADCADNLKCCKAGCVTICQ----MPNEKEGSCPQVDIAFPQLGLCLDQCQVD 99
Query: 413 DSCPSGQKCCSNGCGH-SCQTAV 478
CP KCC NGCG SC T V
Sbjct: 100 SQCPGQLKCCRNGCGKVSCVTPV 122
Score = 50.8 bits (120), Expect = 8e-07
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Frame = +2
Query: 131 CVDRCRGNWDCGAGEECIRKGCGRVCSPAQE------------PVVGICVDQCQRHWECG 274
C C + DC +C + GC +C E P +G+C+DQCQ +C
Sbjct: 44 CTQECLSDADCADNLKCCKAGCVTICQMPNEKEGSCPQVDIAFPQLGLCLDQCQVDSQCP 103
Query: 275 PRMRCVSTGCGHI 313
+++C GCG +
Sbjct: 104 GQLKCCRNGCGKV 116
>ref|XP_001928820.2| PREDICTED: WAP four-disulfide core domain protein 3 isoform 1 [Sus
scrofa].
Length = 113
Score = 60.1 bits (144), Expect = 1e-09
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = +2
Query: 239 CVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDS 418
C + C C +C STGCGH C D R G CP + +G C C D++
Sbjct: 15 CEELCDGDASCPQGHKCCSTGCGHACRG--DIKGGRGGDCPNI---LVGPCIVSCWVDEN 69
Query: 419 CPSGQKCCSNGCGHSCQTAV 478
C +G+KCC +GC C +V
Sbjct: 70 CQAGEKCCKSGCSRFCVLSV 89
Score = 55.5 bits (132), Expect = 3e-08
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +2
Query: 350 GKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQ 469
G+CP P C E C GD SCP G KCCS GCGH+C+
Sbjct: 6 GECPTDPLP----CEELCDGDASCPQGHKCCSTGCGHACR 41
>ref|XP_003134513.1| PREDICTED: antileukoproteinase-like [Sus scrofa].
Length = 151
Score = 58.9 bits (141), Expect = 3e-09
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHIC----SPAQDQVEQRPGKCPVLPKGTIGLCA-----EF 400
+CQ W+C R +C CG C +P++ V+ PGKCPV+ G C +
Sbjct: 61 ECQNDWQCPKRKKCCRDTCGIKCLDPVNPSKS-VKINPGKCPVVT----GQCKMLNPIDH 115
Query: 401 CSGDDSCPSGQKCCSNGCGHSCQTAVPD 484
C D +C +G KCC CG+ C V D
Sbjct: 116 CQNDSNCLNGLKCCKGICGNICVQPVKD 143
>ref|XP_001925105.2| PREDICTED: anosmin-1 [Sus scrofa].
Length = 682
Score = 55.8 bits (133), Expect = 2e-08
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Frame = +2
Query: 239 CVDQCQRHWE---------CGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPK--GTIG 385
C++ C+ W+ C P + C C + + + G CP K G
Sbjct: 86 CLEPCKASWDLRNQQCQSFCEPLFPKKNYECLTSCEFLKYILSVKQGDCPAPEKASGFAA 145
Query: 386 LCAEFCSGDDSCPSGQKCCSNGCGHSCQ 469
C E C D+ C +KCCSNGCGH+CQ
Sbjct: 146 ACVESCEVDNECSGVKKCCSNGCGHTCQ 173
>ref|XP_003361368.1| PREDICTED: WAP four-disulfide core domain protein 5-like [Sus
scrofa].
Length = 121
Score = 53.5 bits (127), Expect = 1e-07
Identities = 27/91 (29%), Positives = 35/91 (38%)
Frame = +2
Query: 206 CSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIG 385
C P P + DQC +C RM+C C C +V + G CP P +
Sbjct: 34 CPPDDGPCLLSVPDQCVDDSQCPSRMKCCHQACFRQCVR---KVSVKKGSCPKDPLRCLS 90
Query: 386 LCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
CS D C +CC CG C+ V
Sbjct: 91 RVQHLCSKDSDCRGLSRCCLGACGRDCRNPV 121
>ref|XP_003360055.1| PREDICTED: WAP four-disulfide core domain protein 5-like [Sus
scrofa].
Length = 121
Score = 53.5 bits (127), Expect = 1e-07
Identities = 27/91 (29%), Positives = 35/91 (38%)
Frame = +2
Query: 206 CSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIG 385
C P P + DQC +C RM+C C C +V + G CP P +
Sbjct: 34 CPPDDGPCLLSVPDQCVDDSQCPSRMKCCHQACFRQCVR---KVSVKKGSCPKDPLRCLS 90
Query: 386 LCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
CS D C +CC CG C+ V
Sbjct: 91 RVQHLCSKDSDCRGLSRCCLGACGRDCRNPV 121
>ref|XP_003360057.1| PREDICTED: antileukoproteinase-like isoform 3 [Sus scrofa].
Length = 131
Score = 50.8 bits (120), Expect = 8e-07
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHIC-SPAQ--DQVEQRPGKCPVLPKGTIGLCA-----EFC 403
+C W+C + +C CG C +P + V+ +PGKCPV+ G C C
Sbjct: 49 KCTSDWQCPDKKKCCRDTCGIKCLNPVAITNPVKVKPGKCPVV----YGQCMMLNPPNHC 104
Query: 404 SGDDSCPSGQKCCSNGCGHSCQTAV 478
D C KCC + CG C T V
Sbjct: 105 KTDSQCLGDLKCCKSMCGKVCLTPV 129
>ref|XP_003134512.1| PREDICTED: antileukoproteinase-like isoform 1 [Sus scrofa].
Length = 131
Score = 50.8 bits (120), Expect = 8e-07
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHIC-SPAQ--DQVEQRPGKCPVLPKGTIGLCA-----EFC 403
+C W+C + +C CG C +P + V+ +PGKCPV+ G C C
Sbjct: 49 KCTSDWQCPDKKKCCRDTCGIKCLNPVAITNPVKVKPGKCPVV----YGQCMMLNPPNHC 104
Query: 404 SGDDSCPSGQKCCSNGCGHSCQTAV 478
D C KCC + CG C T V
Sbjct: 105 KTDSQCLGDLKCCKSMCGKVCLTPV 129
>ref|XP_003360056.1| PREDICTED: antileukoproteinase-like isoform 2 [Sus scrofa].
Length = 131
Score = 50.8 bits (120), Expect = 8e-07
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHIC-SPAQ--DQVEQRPGKCPVLPKGTIGLCA-----EFC 403
+C W+C + +C CG C +P + V+ +PGKCPV+ G C C
Sbjct: 49 KCTSDWQCPDKKKCCRDTCGIKCLNPVAITNPVKVKPGKCPVV----YGQCMMLNPPNHC 104
Query: 404 SGDDSCPSGQKCCSNGCGHSCQTAV 478
D C KCC + CG C T V
Sbjct: 105 KTDSQCLGDLKCCKSMCGKVCLTPV 129
>ref|NP_999035.1| antileukoproteinase [Sus scrofa].
Length = 115
Score = 48.5 bits (114), Expect = 4e-06
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHIC-SPAQ--DQVEQRPGKCPVLPKGTIGLCA-----EFC 403
+C W+C + +C C C +P + V+ +PGKCPV+ G C C
Sbjct: 33 KCTSDWQCPDKKKCCRDTCAIKCLNPVAITNPVKVKPGKCPVV----YGQCMMLNPPNHC 88
Query: 404 SGDDSCPSGQKCCSNGCGHSCQTAV 478
D C KCC + CG C T V
Sbjct: 89 KTDSQCLGDLKCCKSMCGKVCLTPV 113
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 19,411,228
Number of extensions: 585375
Number of successful extensions: 2189
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 2134
Number of HSP's successfully gapped: 12
Length of query: 249
Length of database: 11,343,932
Length adjustment: 96
Effective length of query: 153
Effective length of database: 8,953,820
Effective search space: 1369934460
Effective search space used: 1369934460
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012523
(747 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_082237.1| WAP four-disulfide core domain 3 [Mus musculus]. 67 1e-11
Alignment gi|NP_899072.1| WDNM1-like protein [Mus musculus]. 66 2e-11
Alignment gi|NP_080599.1| WAP four-disulfide core domain protein 2 precur... 66 3e-11
Alignment gi|NP_001075426.1| activated macrophage/microglia WAP domain pr... 66 3e-11
Alignment gi|XP_003086827.1| PREDICTED: extracellular peptidase inhibitor... 66 3e-11
Alignment gi|NP_031995.3| extracellular peptidase inhibitor precursor [Mu... 64 9e-11
Alignment gi|NP_001074019.1| WAP four-disulfide core domain protein 8 [Mu... 55 6e-08
Alignment gi|NP_035544.1| antileukoproteinase precursor [Mus musculus]. 51 8e-07
Alignment gi|NP_663344.2| WAP four-disulfide core domain 5 precursor [Mus... 49 3e-06
>ref|NP_082237.1| WAP four-disulfide core domain 3 [Mus musculus].
Length = 130
Score = 67.4 bits (163), Expect = 1e-11
Identities = 37/100 (37%), Positives = 47/100 (47%)
Frame = +2
Query: 167 AGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQR 346
AGE +R C P QE C C +C STGCGH C D R
Sbjct: 16 AGEHALRGECPADPLPCQE--------LCTGDESCPQGHKCCSTGCGHACRG--DIEGGR 65
Query: 347 PGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSC 466
G+CP + +GLC C D++C SG++CC +GCG C
Sbjct: 66 DGQCPRI---LVGLCIVQCMMDENCQSGERCCKSGCGRFC 102
Score = 57.4 bits (137), Expect = 1e-08
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +2
Query: 350 GKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQ 469
G+CP P C E C+GD+SCP G KCCS GCGH+C+
Sbjct: 23 GECPADPLP----CQELCTGDESCPQGHKCCSTGCGHACR 58
Score = 54.7 bits (130), Expect = 7e-08
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Frame = +2
Query: 131 CVDRCRGNWDCGAGEECIRKGCGRVCSPAQEP---------VVGICVDQCQRHWECGPRM 283
C + C G+ C G +C GCG C E +VG+C+ QC C
Sbjct: 32 CQELCTGDESCPQGHKCCSTGCGHACRGDIEGGRDGQCPRILVGLCIVQCMMDENCQSGE 91
Query: 284 RCVSTGCGHICSPAQDQVEQ 343
RC +GCG C P ++Q
Sbjct: 92 RCCKSGCGRFCIPGLQPLQQ 111
>ref|NP_899072.1| WDNM1-like protein [Mus musculus].
Length = 63
Score = 66.2 bits (160), Expect = 2e-11
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2
Query: 74 SSEVQELQAAVRPVKFPGLCVDRCRGNWDCGAGEECIRKGCGRVCS 211
S EVQELQAAVRP++ G C + CRG+WDCG E+C+ GC +C+
Sbjct: 16 SLEVQELQAAVRPLQLLGTCAELCRGDWDCGPEEQCVSIGCSHICT 61
>ref|NP_080599.1| WAP four-disulfide core domain protein 2 precursor [Mus musculus].
Length = 174
Score = 65.9 bits (159), Expect = 3e-11
Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 15/129 (11%)
Frame = +2
Query: 131 CVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGH 310
CV C + DC +C + GC VCS P G + E G + S G H
Sbjct: 45 CVLECTLDKDCADNRKCCQAGCSSVCSKPNGPSEGELSGTDTKLSETGTTTQ--SAGLDH 102
Query: 311 ICSPAQDQVEQRP--------------GKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSN 448
P QV +P G CP + +GLC + C D C KCC N
Sbjct: 103 TTKPPGGQVSTKPPAVTREGLGVREKQGTCPSVDIPKLGLCEDQCQVDSQCSGNMKCCRN 162
Query: 449 GCGH-SCQT 472
GCG +C T
Sbjct: 163 GCGKMACTT 171
>ref|NP_001075426.1| activated macrophage/microglia WAP domain protein precursor [Mus
musculus].
Length = 76
Score = 65.9 bits (159), Expect = 3e-11
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +2
Query: 341 QRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
++PG CP ++G+C + CSGD SCP KCCSN CGH C+T V
Sbjct: 30 EKPGACPKPSPESVGICVDQCSGDGSCPGNMKCCSNSCGHVCKTPV 75
>ref|XP_003086827.1| PREDICTED: extracellular peptidase inhibitor-like [Mus musculus].
Length = 76
Score = 65.9 bits (159), Expect = 3e-11
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +2
Query: 341 QRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
++PG CP ++G+C + CSGD SCP KCCSN CGH C+T V
Sbjct: 30 EKPGACPKPSPESVGICVDQCSGDGSCPGNMKCCSNSCGHVCKTPV 75
>ref|NP_031995.3| extracellular peptidase inhibitor precursor [Mus musculus].
Length = 74
Score = 64.3 bits (155), Expect = 9e-11
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +2
Query: 338 EQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAV 478
+++PG CP P + G C E C+GD SC KCCSNGCGH+C+ V
Sbjct: 27 KEKPGACPKPPPRSFGTCDERCTGDGSCSGNMKCCSNGCGHACKPPV 73
>ref|NP_001074019.1| WAP four-disulfide core domain protein 8 [Mus musculus].
Length = 273
Score = 55.1 bits (131), Expect = 6e-08
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 22/130 (16%)
Frame = +2
Query: 143 CRGNWDCGAGEECIRKGCGRVC-SPAQEPVV-----GICVDQCQRHWECGPRMRC----- 289
C+ +++C A +C + CGR C P +EP + G C D R + + +C
Sbjct: 98 CKTDFNCKAHFKCCQFACGRKCMDPYEEPCMLPSDKGNCQDILTRWYFDSQKHQCRAFLY 157
Query: 290 -----------VSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQK 436
T C + C ++ G+CP+ P C C D CP +K
Sbjct: 158 SGCRGNANNFLTKTDCRNAC-----MFVEKKGQCPLFPFQMRMECPASCKNDMDCPEKEK 212
Query: 437 CCSNGCGHSC 466
CC + CG C
Sbjct: 213 CCESRCGFIC 222
>ref|NP_035544.1| antileukoproteinase precursor [Mus musculus].
Length = 131
Score = 51.2 bits (121), Expect = 8e-07
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +2
Query: 212 PAQEPVVGICVD--QCQRHWECGPRMRCVSTGCGHIC---SPAQDQVEQRPGKCPVLPKG 376
PA++P + ++ QC+ WEC + RC CG C P + V ++PG+C
Sbjct: 37 PAKKPAQCLKLEKPQCRTDWECPGKQRCCQDACGSKCVNPVPIRKPVWRKPGRCVKTQAR 96
Query: 377 TIGL-CAEFCSGDDSCPSGQKCCSNGCGHSC 466
+ L C D C KCC CG C
Sbjct: 97 CMMLNPPNVCQRDGQCDGKYKCCEGICGKVC 127
>ref|NP_663344.2| WAP four-disulfide core domain 5 precursor [Mus musculus].
Length = 126
Score = 49.3 bits (116), Expect = 3e-06
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +2
Query: 245 DQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCP 424
DQC +C +C C C P +V + GKCPV + C+ D C
Sbjct: 48 DQCLNDKQCPSSWKCCRRACFLQCMP---RVFVKSGKCPVDQLRCLSPTKHMCNKDSDCS 104
Query: 425 SGQKCCSNGCGHSCQ 469
++CC++ CG C+
Sbjct: 105 GKKRCCASACGRDCR 119
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 26,112,075
Number of extensions: 756583
Number of successful extensions: 2970
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 2905
Number of HSP's successfully gapped: 11
Length of query: 249
Length of database: 15,617,559
Length adjustment: 99
Effective length of query: 150
Effective length of database: 12,643,995
Effective search space: 1896599250
Effective search space used: 1896599250
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012523
(747 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_542181.1| WAP four-disulfide core domain protein 3 precur... 78 7e-15
Alignment gi|NP_006094.3| WAP four-disulfide core domain protein 2 precur... 64 1e-10
Alignment gi|NP_003055.1| antileukoproteinase precursor [Homo sapiens]. 59 6e-09
Alignment gi|NP_000207.2| anosmin-1 precursor [Homo sapiens]. 54 1e-07
Alignment gi|NP_570966.2| WAP four-disulfide core domain protein 8 precur... 52 6e-07
Alignment gi|NP_852611.2| WAP four-disulfide core domain protein 8 precur... 52 6e-07
>ref|NP_542181.1| WAP four-disulfide core domain protein 3 precursor [Homo sapiens].
Length = 231
Score = 78.2 bits (191), Expect = 7e-15
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Frame = +2
Query: 131 CVDRCRGNWDCGAGEECIRKGCGRVCSPAQE------PVV---GICVDQCQRHWECGPRM 283
C + C+G+ C A ++C GCGR+C + P V C+ +C C
Sbjct: 40 CKELCQGDELCPAEQKCCTTGCGRICRDIPKGRKRDCPRVIRKQSCLKRCITDETCPGVK 99
Query: 284 RCVSTGCGHICSP--AQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGCG 457
+C + GC C ++ ++ + G+CP P C E C GD SCP G KCCS GCG
Sbjct: 100 KCCTLGCNKSCVVPISKQKLAEFGGECPADPLP----CEELCDGDASCPQGHKCCSTGCG 155
Query: 458 HSC 466
+C
Sbjct: 156 RTC 158
Score = 68.9 bits (167), Expect = 4e-12
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Frame = +2
Query: 131 CVDRCRGNWDCGAGEECIRKGCGRVC---------------SPAQEPVVGICVDQCQRHW 265
C+ RC + C ++C GC + C PA +P+ C + C
Sbjct: 85 CLKRCITDETCPGVKKCCTLGCNKSCVVPISKQKLAEFGGECPA-DPLP--CEELCDGDA 141
Query: 266 ECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCS 445
C +C STGCG C D R G CP K +GLC C D++C +G+KCC
Sbjct: 142 SCPQGHKCCSTGCGRTC--LGDIEGGRGGDCP---KVLVGLCIVGCVMDENCQAGEKCCK 196
Query: 446 NGCGHSC 466
+GCG C
Sbjct: 197 SGCGRFC 203
Score = 61.2 bits (147), Expect = 9e-10
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 206 CSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCP-VLPKGTI 382
C P + P C + CQ C +C +TGCG IC +D + R CP V+ K +
Sbjct: 33 CPPHKNP----CKELCQGDELCPAEQKCCTTGCGRIC---RDIPKGRKRDCPRVIRKQS- 84
Query: 383 GLCAEFCSGDDSCPSGQKCCSNGCGHSCQTAVPDEK 490
C + C D++CP +KCC+ GC SC + +K
Sbjct: 85 --CLKRCITDETCPGVKKCCTLGCNKSCVVPISKQK 118
Score = 50.4 bits (119), Expect = 2e-06
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Frame = +2
Query: 131 CVDRCRGNWDCGAGEECIRKGCGRVC---------SPAQEPVVGICVDQCQRHWECGPRM 283
C + C G+ C G +C GCGR C + +VG+C+ C C
Sbjct: 133 CEELCDGDASCPQGHKCCSTGCGRTCLGDIEGGRGGDCPKVLVGLCIVGCVMDENCQAGE 192
Query: 284 RCVSTGCGHICSP 322
+C +GCG C P
Sbjct: 193 KCCKSGCGRFCVP 205
>ref|NP_006094.3| WAP four-disulfide core domain protein 2 precursor [Homo sapiens].
Length = 124
Score = 64.3 bits (155), Expect = 1e-10
Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 239 CVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKG--TIGLCAEFCSGD 412
C +C EC ++C S GC CS D + G CP + +GLC + C D
Sbjct: 45 CTQECVSDSECADNLKCCSAGCATFCSLPND----KEGSCPQVNINFPQLGLCRDQCQVD 100
Query: 413 DSCPSGQKCCSNGCGH-SCQT 472
CP KCC NGCG SC T
Sbjct: 101 SQCPGQMKCCRNGCGKVSCVT 121
>ref|NP_003055.1| antileukoproteinase precursor [Homo sapiens].
Length = 132
Score = 58.5 bits (140), Expect = 6e-09
Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Frame = +2
Query: 248 QCQRHWECGPRMRCVSTGCGHICSPAQDQ---VEQRPGKCPVLPKGTIGLCA-----EFC 403
+CQ W+C + RC CG C D ++PGKCPV T G C FC
Sbjct: 50 ECQSDWQCPGKKRCCPDTCGIKCLDPVDTPNPTRRKPGKCPV----TYGQCLMLNPPNFC 105
Query: 404 SGDDSCPSGQKCCSNGCGHSCQTAV 478
D C KCC CG SC + V
Sbjct: 106 EMDGQCKRDLKCCMGMCGKSCVSPV 130
>ref|NP_000207.2| anosmin-1 precursor [Homo sapiens].
Length = 680
Score = 54.3 bits (129), Expect = 1e-07
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 188 KGCGRVCSPAQEPVVGICVDQCQRHWECGPRMRCVSTGCGHICSPAQDQVEQRPGKCPVL 367
K C + P +E + QCQ C P S C C + + + G CP
Sbjct: 81 KQCSKCLEPCKESG-DLRKHQCQSF--CEPLFPKKSYECLTSCEFLKYILLVKQGDCPAP 137
Query: 368 PK--GTIGLCAEFCSGDDSCPSGQKCCSNGCGHSCQ 469
K G C E C D+ C +KCCSNGCGH+CQ
Sbjct: 138 EKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQ 173
>ref|NP_570966.2| WAP four-disulfide core domain protein 8 precursor [Homo sapiens].
Length = 241
Score = 52.0 bits (123), Expect = 6e-07
Identities = 43/156 (27%), Positives = 57/156 (36%), Gaps = 28/156 (17%)
Frame = +2
Query: 122 PGLCV-----------DRCRGNWDCGAGEECIRKGCGRVC-SPAQEPVV-----GICVDQ 250
PGLC D C ++DC ++C C + C P QEP + G C +
Sbjct: 48 PGLCPKERLTCTTELPDSCNTDFDCKEYQKCCFFACQKKCMDPFQEPCMLPVRHGNCNHE 107
Query: 251 CQRHWECGPRMRCVS---TGCGHICSPAQDQVEQRP--------GKCPVLPKGTIGLCAE 397
QR RC GC + ++ R G+CP+ P C
Sbjct: 108 AQRWHFDFKNYRCTPFKYRGCEGNANNFLNEDACRTACMLIVKDGQCPLFPFTERKECPP 167
Query: 398 FCSGDDSCPSGQKCCSNGCGHSCQTAVPDEKTFPSR 505
C D CP KCC + CG C A +K F R
Sbjct: 168 SCHSDIDCPQTDKCCESRCGFVCARAWTVKKGFCPR 203
Score = 51.2 bits (121), Expect = 9e-07
Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Frame = +2
Query: 110 PVKFPGLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGI-----CVDQCQRHWECG 274
P K+ G C GN + E+ R C + Q P+ C C +C
Sbjct: 122 PFKYRG-----CEGNANNFLNEDACRTACMLIVKDGQCPLFPFTERKECPPSCHSDIDCP 176
Query: 275 PRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGC 454
+C + CG +C+ A + G CP P + C D+ CP +KCCS+ C
Sbjct: 177 QTDKCCESRCGFVCARAWTV---KKGFCPRKPLLCTKIDKPKCLQDEECPLVEKCCSH-C 232
Query: 455 GHSC 466
G C
Sbjct: 233 GLKC 236
>ref|NP_852611.2| WAP four-disulfide core domain protein 8 precursor [Homo sapiens].
Length = 241
Score = 52.0 bits (123), Expect = 6e-07
Identities = 43/156 (27%), Positives = 57/156 (36%), Gaps = 28/156 (17%)
Frame = +2
Query: 122 PGLCV-----------DRCRGNWDCGAGEECIRKGCGRVC-SPAQEPVV-----GICVDQ 250
PGLC D C ++DC ++C C + C P QEP + G C +
Sbjct: 48 PGLCPKERLTCTTELPDSCNTDFDCKEYQKCCFFACQKKCMDPFQEPCMLPVRHGNCNHE 107
Query: 251 CQRHWECGPRMRCVS---TGCGHICSPAQDQVEQRP--------GKCPVLPKGTIGLCAE 397
QR RC GC + ++ R G+CP+ P C
Sbjct: 108 AQRWHFDFKNYRCTPFKYRGCEGNANNFLNEDACRTACMLIVKDGQCPLFPFTERKECPP 167
Query: 398 FCSGDDSCPSGQKCCSNGCGHSCQTAVPDEKTFPSR 505
C D CP KCC + CG C A +K F R
Sbjct: 168 SCHSDIDCPQTDKCCESRCGFVCARAWTVKKGFCPR 203
Score = 51.2 bits (121), Expect = 9e-07
Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Frame = +2
Query: 110 PVKFPGLCVDRCRGNWDCGAGEECIRKGCGRVCSPAQEPVVGI-----CVDQCQRHWECG 274
P K+ G C GN + E+ R C + Q P+ C C +C
Sbjct: 122 PFKYRG-----CEGNANNFLNEDACRTACMLIVKDGQCPLFPFTERKECPPSCHSDIDCP 176
Query: 275 PRMRCVSTGCGHICSPAQDQVEQRPGKCPVLPKGTIGLCAEFCSGDDSCPSGQKCCSNGC 454
+C + CG +C+ A + G CP P + C D+ CP +KCCS+ C
Sbjct: 177 QTDKCCESRCGFVCARAWTV---KKGFCPRKPLLCTKIDKPKCLQDEECPLVEKCCSH-C 232
Query: 455 GHSC 466
G C
Sbjct: 233 GLKC 236
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 30,748,738
Number of extensions: 895101
Number of successful extensions: 3515
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 3440
Number of HSP's successfully gapped: 11
Length of query: 249
Length of database: 18,297,164
Length adjustment: 100
Effective length of query: 149
Effective length of database: 15,000,764
Effective search space: 2235113836
Effective search space used: 2235113836
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012523
(747 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL892301.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 196 1e-47
>gb|GL892301.1| Sus scrofa unplaced genomic scaffold chrU_scaffold118
Length = 158
Score = 196 bits (99), Expect = 1e-47
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 629 tctagaataacttggcttaagggttgaattctggcaattgtttaaggaatagtgcttgca 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tctagaataacttggcttaagggttgaattctggcaattgtttaaggaatagtgcttgca 99
Query: 689 aaggatccttcttctgaataaaacgacttctctggcatt 727
|||||||||||||||||||||||||||||||||||||||
Sbjct: 98 aaggatccttcttctgaataaaacgacttctctggcatt 60
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 23,215,148
Number of extensions: 534
Number of successful extensions: 534
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 534
Number of HSP's successfully gapped: 1
Length of query: 747
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 726
Effective length of database: 2,808,413,156
Effective search space: 2038907951256
Effective search space used: 2038907951256
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 17 (34.2 bits)
S2: 29 (58.0 bits)