Animal-Genome cDNA 20110601C-012560


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012560
         (1541 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001070371.1| phosphoglucomutase-1 [Bos taurus].                665   0.0  
Alignment   gi|NP_001095805.1| phosphoglucomutase-like protein 5 [Bos tauru...   486   e-137
Alignment   gi|XP_002705027.1| PREDICTED: phosphoglucomutase 5-like [Bos ta...   457   e-128

>ref|NP_001070371.1| phosphoglucomutase-1 [Bos taurus].
          Length = 562

 Score =  665 bits (1717), Expect(2) = 0.0
 Identities = 337/363 (92%), Positives = 338/363 (93%)
 Frame = +2

Query: 155  MVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            MVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSS+NYAENFIQSIISTVEPA RQEATLVVG
Sbjct: 1    MVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSSNYAENFIQSIISTVEPAQRQEATLVVG 60

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
            GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSC            LTASHNP
Sbjct: 61   GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP 120

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDL VDLGVLGKQQFDLENK
Sbjct: 121  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLHVDLGVLGKQQFDLENK 180

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
            FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE
Sbjct: 181  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 240

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEH           RNMILGKH
Sbjct: 241  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNMILGKH 300

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 1234
            GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK
Sbjct: 301  GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 360

Query: 1235 FFG 1243
            FFG
Sbjct: 361  FFG 363



 Score =  176 bits (447), Expect(2) = 0.0
 Identities = 87/107 (81%), Positives = 92/107 (85%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILATRKQSVE  LKD
Sbjct: 356  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKD 415

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
            HWQKYG  F  +Y+Y EVEAEGA+KMMKELEALISDRS  G+QFPVG
Sbjct: 416  HWQKYGRNFFTRYDYEEVEAEGANKMMKELEALISDRSFVGKQFPVG 462


>ref|NP_001095805.1| phosphoglucomutase-like protein 5 [Bos taurus].
          Length = 567

 Score =  486 bits (1251), Expect = e-137
 Identities = 230/381 (60%), Positives = 290/381 (76%), Gaps = 1/381 (0%)
 Frame = +2

Query: 158  VKIVTVKTKAYQDQKP-GTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            + ++TV T  Y+DQ+P G  GLR+   +F+   NY  NFIQS++S+++   RQ  T+VVG
Sbjct: 6    IPVLTVPTAPYEDQRPAGGGGLRRPTGLFEGQRNYLPNFIQSVLSSIDLRDRQGCTMVVG 65

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
             DGR++ + A +++V++AAANGIGRL+IGQNGILSTPAVSC            LTASH P
Sbjct: 66   SDGRYFSRTATEIVVQMAAANGIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCP 125

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGP G+FG+KFN++NGGPAP+ ++DKI+QISKTIEEY ICPDL++DL  LG+Q+FDLENK
Sbjct: 126  GGPGGEFGVKFNVANGGPAPDVVSDKIYQISKTIEEYTICPDLRIDLSRLGRQEFDLENK 185

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
            FKPF VEIVD V+ Y  +LR IFDFNA+K LL+GP +LKIR+DAMHGV+GPYV+K+LC+E
Sbjct: 186  FKPFRVEIVDPVDIYLNLLRTIFDFNAIKSLLTGPGQLKIRVDAMHGVMGPYVRKVLCDE 245

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSA+NCVPLEDFGG HPDPNLTYA  L+E MK GE+           R MILG++
Sbjct: 246  LGAPANSAINCVPLEDFGGQHPDPNLTYATTLLEAMKGGEYGFGAAFDADGDRYMILGQN 305

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 1234
            GFFV+PSDS+A+IAAN+  IPYF+Q GVRGF RSMPTS ALDRVA + K+ +YETP GW+
Sbjct: 306  GFFVSPSDSLAIIAANLSCIPYFRQMGVRGFGRSMPTSTALDRVAKSMKVPVYETPAGWR 365

Query: 1235 FFGI*WMQANCPFVGRRASET 1297
            FF        C   G  +  T
Sbjct: 366  FFSNLMDSGRCSLCGEESFGT 386



 Score =  130 bits (326), Expect = 4e-30
 Identities = 58/101 (57%), Positives = 79/101 (78%)
 Frame = +1

Query: 1237 FWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKDHWQKYG 1416
            F NLMD+ + SLCGEESFG GSDH+REKDGLWAVL WLSI+A RKQSVE  ++DHW K+G
Sbjct: 367  FSNLMDSGRCSLCGEESFGTGSDHLREKDGLWAVLVWLSIIAARKQSVEEIVRDHWAKFG 426

Query: 1417 PEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
              +  +++Y  +E +  + +M++LEAL++D+S  G+QF VG
Sbjct: 427  RHYYCRFDYEGLEPKTTYYIMRDLEALLTDKSFIGQQFAVG 467


>ref|XP_002705027.1| PREDICTED: phosphoglucomutase 5-like [Bos taurus].
          Length = 348

 Score =  457 bits (1176), Expect = e-128
 Identities = 216/343 (62%), Positives = 271/343 (79%), Gaps = 1/343 (0%)
 Frame = +2

Query: 158  VKIVTVKTKAYQDQKP-GTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            + ++TV T  Y+DQ+P G  GLR+   +F+   NY  NFIQS++S+++   RQ  T+VVG
Sbjct: 6    IPVLTVPTAPYEDQRPAGGGGLRRPTGLFEGQRNYLPNFIQSVLSSIDLRDRQGCTMVVG 65

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
             DGR++ + A +++V++AAANGIGRL+IGQNGILSTPAVSC            LTASH P
Sbjct: 66   SDGRYFSRTATEIVVQMAAANGIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCP 125

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGP G+FG+KFN++NGGPAP+ ++DKI+QISKTIEEY ICPDL++DL  LG+Q+FDLENK
Sbjct: 126  GGPGGEFGVKFNVANGGPAPDVVSDKIYQISKTIEEYTICPDLRIDLSRLGRQEFDLENK 185

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
            FKPF VEIVD V+ Y  +LR IFDFNA+K LL+GP +LKIR+DAMHGV+GPYV+K+LC+E
Sbjct: 186  FKPFRVEIVDPVDIYLNLLRTIFDFNAIKSLLTGPGQLKIRVDAMHGVMGPYVRKVLCDE 245

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSA+NCVPLEDFGG HPDPNLTYA  L+E MK GE+           R MILG++
Sbjct: 246  LGAPANSAINCVPLEDFGGQHPDPNLTYATTLLEAMKGGEYGFGAAFDADGDRYMILGQN 305

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDR 1183
            GFFV+PSDS+A+IAAN+  IPYF+Q GVRGF RSMPTS ALDR
Sbjct: 306  GFFVSPSDSLAIIAANLSCIPYFRQMGVRGFGRSMPTSTALDR 348


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 58,289,165
Number of extensions: 1628554
Number of successful extensions: 4823
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4815
Number of HSP's successfully gapped: 5
Length of query: 513
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 406
Effective length of database: 14,140,958
Effective search space: 5741228948
Effective search space used: 5741228948
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-012560

Animal-Genome cDNA 20110601C-012560


Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012560
         (1541 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_865342.1| PREDICTED: similar to Phosphoglucomutase 1 (Glu...   665   0.0  
Alignment   gi|XP_865359.1| PREDICTED: similar to phosphoglucomutase 1 isof...   599   0.0  
Alignment   gi|XP_536684.2| PREDICTED: similar to phosphoglucomutase 1 isof...   599   0.0  
Alignment   gi|XP_865309.1| PREDICTED: similar to Phosphoglucomutase 1 (Glu...   543   0.0  
Alignment   gi|XP_533534.2| PREDICTED: similar to phosphoglucomutase 5 [Can...   411   e-114
Alignment   gi|XP_865293.1| PREDICTED: similar to phosphoglucomutase 1 isof...   153   5e-37

>ref|XP_865342.1| PREDICTED: similar to Phosphoglucomutase 1 (Glucose phosphomutase 1)
            (PGM 1) isoform 4 [Canis familiaris].
          Length = 562

 Score =  665 bits (1716), Expect(2) = 0.0
 Identities = 336/363 (92%), Positives = 338/363 (93%)
 Frame = +2

Query: 155  MVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            MVKIVTVKT+AY DQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPA RQEATLVVG
Sbjct: 1    MVKIVTVKTRAYPDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEATLVVG 60

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
            GDGRFYMKEAIQLIVR+AAANGIGRLVIGQNGILSTPAVSC            LTASHNP
Sbjct: 61   GDGRFYMKEAIQLIVRVAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP 120

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK
Sbjct: 121  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 180

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
            FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE
Sbjct: 181  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 240

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEH           RNMILGKH
Sbjct: 241  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNMILGKH 300

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 1234
            GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK
Sbjct: 301  GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 360

Query: 1235 FFG 1243
            FFG
Sbjct: 361  FFG 363



 Score =  170 bits (431), Expect(2) = 0.0
 Identities = 84/107 (78%), Positives = 90/107 (84%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILA RKQSVE  LKD
Sbjct: 356  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILAARKQSVEDILKD 415

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
            HWQKYG  F  +Y+Y EVEAEGA+KMMK+LEALISDRS  G+QF VG
Sbjct: 416  HWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALISDRSFVGKQFSVG 462


>ref|XP_865359.1| PREDICTED: similar to phosphoglucomutase 1 isoform 5 [Canis
            familiaris].
          Length = 580

 Score =  599 bits (1545), Expect(2) = 0.0
 Identities = 299/360 (83%), Positives = 316/360 (87%)
 Frame = +2

Query: 164  IVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVGGDG 343
            ++T  T  Y DQKPGTSGLRK+   F++   Y ENFIQS+  +++   RQ +++VVGGDG
Sbjct: 22   LLTFATAPYYDQKPGTSGLRKKTYCFEAKPCYLENFIQSLFFSIDLKDRQGSSMVVGGDG 81

Query: 344  RFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNPGGP 523
            R++ K AI+ IV++AAANGIGRLVIGQNGILSTPAVSC            LTASHNPGGP
Sbjct: 82   RYFNKSAIETIVQMAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGP 141

Query: 524  NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP 703
            NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP
Sbjct: 142  NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP 201

Query: 704  FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA 883
            FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA
Sbjct: 202  FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA 261

Query: 884  PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKHGFF 1063
            PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEH           RNMILGKHGFF
Sbjct: 262  PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNMILGKHGFF 321

Query: 1064 VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG 1243
            VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG
Sbjct: 322  VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG 381



 Score =  170 bits (431), Expect(2) = 0.0
 Identities = 84/107 (78%), Positives = 90/107 (84%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILA RKQSVE  LKD
Sbjct: 374  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILAARKQSVEDILKD 433

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
            HWQKYG  F  +Y+Y EVEAEGA+KMMK+LEALISDRS  G+QF VG
Sbjct: 434  HWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALISDRSFVGKQFSVG 480


>ref|XP_536684.2| PREDICTED: similar to phosphoglucomutase 1 isoform 1 [Canis
            familiaris].
          Length = 580

 Score =  599 bits (1545), Expect(2) = 0.0
 Identities = 299/360 (83%), Positives = 316/360 (87%)
 Frame = +2

Query: 164  IVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVGGDG 343
            ++T  T  Y DQKPGTSGLRK+   F++   Y ENFIQS+  +++   RQ +++VVGGDG
Sbjct: 22   LLTFATAPYYDQKPGTSGLRKKTYCFEAKPCYLENFIQSLFFSIDLKDRQGSSMVVGGDG 81

Query: 344  RFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNPGGP 523
            R++ K AI+ IV++AAANGIGRLVIGQNGILSTPAVSC            LTASHNPGGP
Sbjct: 82   RYFNKSAIETIVQMAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGP 141

Query: 524  NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP 703
            NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP
Sbjct: 142  NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP 201

Query: 704  FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA 883
            FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA
Sbjct: 202  FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA 261

Query: 884  PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKHGFF 1063
            PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEH           RNMILGKHGFF
Sbjct: 262  PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNMILGKHGFF 321

Query: 1064 VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG 1243
            VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG
Sbjct: 322  VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG 381



 Score =  170 bits (431), Expect(2) = 0.0
 Identities = 84/107 (78%), Positives = 90/107 (84%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILA RKQSVE  LKD
Sbjct: 374  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILAARKQSVEDILKD 433

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
            HWQKYG  F  +Y+Y EVEAEGA+KMMK+LEALISDRS  G+QF VG
Sbjct: 434  HWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALISDRSFVGKQFSVG 480


>ref|XP_865309.1| PREDICTED: similar to Phosphoglucomutase 1 (Glucose phosphomutase 1)
            (PGM 1) isoform 3 [Canis familiaris].
          Length = 513

 Score =  543 bits (1400), Expect(2) = 0.0
 Identities = 287/363 (79%), Positives = 289/363 (79%)
 Frame = +2

Query: 155  MVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            MVKIVTVKT+AY DQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPA RQEATLVVG
Sbjct: 1    MVKIVTVKTRAYPDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEATLVVG 60

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
            GDGRFYMKEAIQLIVR+AAANGIGRLVIGQNGILSTPAVSC            LTASHNP
Sbjct: 61   GDGRFYMKEAIQLIVRVAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP 120

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGPNGDFGIKFNISNG                                            
Sbjct: 121  GGPNGDFGIKFNISNG-------------------------------------------- 136

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
                 VEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE
Sbjct: 137  -----VEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 191

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEH           RNMILGKH
Sbjct: 192  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNMILGKH 251

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 1234
            GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK
Sbjct: 252  GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 311

Query: 1235 FFG 1243
            FFG
Sbjct: 312  FFG 314



 Score =  170 bits (431), Expect(2) = 0.0
 Identities = 84/107 (78%), Positives = 90/107 (84%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILA RKQSVE  LKD
Sbjct: 307  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILAARKQSVEDILKD 366

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
            HWQKYG  F  +Y+Y EVEAEGA+KMMK+LEALISDRS  G+QF VG
Sbjct: 367  HWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALISDRSFVGKQFSVG 413


>ref|XP_533534.2| PREDICTED: similar to phosphoglucomutase 5 [Canis familiaris].
          Length = 494

 Score =  411 bits (1056), Expect = e-114
 Identities = 195/299 (65%), Positives = 233/299 (77%)
 Frame = +2

Query: 401  IGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNPGGPNGDFGIKFNISNGGPAPEA 580
            IGRL+IGQNGILSTPAVSC            LTASH PGGP G+FG+KFN++NGGPAP+ 
Sbjct: 15   IGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCPGGPGGEFGVKFNVANGGPAPDV 74

Query: 581  ITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNI 760
            ++DKI+QISKTIEEYAICPDL++DL  LG+Q+FDLENKFKPF VEIVD V+ Y  +LR I
Sbjct: 75   VSDKIYQISKTIEEYAICPDLRIDLSRLGRQEFDLENKFKPFRVEIVDPVDIYLNLLRTI 134

Query: 761  FDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHP 940
            FDFNA+K LL+GP +LKIR+DAMHGV+GPYV+K+LC+ELGAPANSA+NCVPLEDFGG HP
Sbjct: 135  FDFNAIKSLLTGPGQLKIRVDAMHGVMGPYVRKVLCDELGAPANSAINCVPLEDFGGQHP 194

Query: 941  DPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKHGFFVNPSDSVAVIAANIFSIPY 1120
            DPNLTYA  L+E MK GE+           R MILG++GFFV+PSDS+A+IAAN+  IPY
Sbjct: 195  DPNLTYATTLLEAMKGGEYGFGAAFDADGDRYMILGRNGFFVSPSDSLAIIAANLPCIPY 254

Query: 1121 FQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGI*WMQANCPFVGRRASET 1297
            F+Q GVRGF RSMPTS ALDRVA + K+ +YETP GW+FF        C   G  +  T
Sbjct: 255  FRQMGVRGFGRSMPTSMALDRVAKSMKVPVYETPAGWRFFSNLMDSGRCSLCGEESFGT 313



 Score =  131 bits (329), Expect = 2e-30
 Identities = 59/101 (58%), Positives = 79/101 (78%)
 Frame = +1

Query: 1237 FWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKDHWQKYG 1416
            F NLMD+ + SLCGEESFG GSDH+REKDGLWAVL WLSILA RKQSVE  ++DHW K+G
Sbjct: 294  FSNLMDSGRCSLCGEESFGTGSDHLREKDGLWAVLVWLSILAARKQSVEEIVRDHWAKFG 353

Query: 1417 PEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
              +  +++Y  +E +  + +M++LEAL++D+S  G+QF VG
Sbjct: 354  RHYYCRFDYEGLEPKTTYYIMRDLEALVTDKSFIGQQFAVG 394


>ref|XP_865293.1| PREDICTED: similar to phosphoglucomutase 1 isoform 2 [Canis
           familiaris].
          Length = 90

 Score =  153 bits (386), Expect = 5e-37
 Identities = 78/82 (95%), Positives = 80/82 (97%)
 Frame = +2

Query: 155 MVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
           MVKIVTVKT+AY DQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPA RQEATLVVG
Sbjct: 1   MVKIVTVKTRAYPDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEATLVVG 60

Query: 335 GDGRFYMKEAIQLIVRIAAANG 400
           GDGRFYMKEAIQLIVR+AAANG
Sbjct: 61  GDGRFYMKEAIQLIVRVAAANG 82


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 61,086,764
Number of extensions: 1687623
Number of successful extensions: 5001
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 4998
Number of HSP's successfully gapped: 12
Length of query: 513
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 406
Effective length of database: 15,307,552
Effective search space: 6214866112
Effective search space used: 6214866112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012560
         (1541 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003127993.1| PREDICTED: phosphoglucomutase-1 isoform 1 [S...   681   0.0  
Alignment   gi|XP_003127994.1| PREDICTED: phosphoglucomutase-1 isoform 2 [S...   601   0.0  
Alignment   gi|XP_003121981.2| PREDICTED: phosphoglucomutase-like protein 5...   414   e-116
Alignment   gi|XP_003361355.1| PREDICTED: phosphoglucomutase-like protein 5...   218   9e-57
Alignment   gi|XP_003121980.2| PREDICTED: phosphoglucomutase-like protein 5...   158   9e-39
Alignment   gi|XP_003121984.2| PREDICTED: phosphoglucomutase-like protein 5...   130   2e-30

>ref|XP_003127993.1| PREDICTED: phosphoglucomutase-1 isoform 1 [Sus scrofa].
          Length = 590

 Score =  681 bits (1758), Expect(2) = 0.0
 Identities = 345/368 (93%), Positives = 345/368 (93%)
 Frame = +2

Query: 140  KQTATMVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEA 319
            KQTATMVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEA
Sbjct: 24   KQTATMVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEA 83

Query: 320  TLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLT 499
            TLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSC            LT
Sbjct: 84   TLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILT 143

Query: 500  ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQF 679
            ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQF
Sbjct: 144  ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQF 203

Query: 680  DLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKK 859
            DLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKK
Sbjct: 204  DLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKK 263

Query: 860  ILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNM 1039
            ILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEH           RNM
Sbjct: 264  ILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNM 323

Query: 1040 ILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYET 1219
            ILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYET
Sbjct: 324  ILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYET 383

Query: 1220 PTGWKFFG 1243
            PTGWKFFG
Sbjct: 384  PTGWKFFG 391



 Score =  176 bits (447), Expect(2) = 0.0
 Identities = 87/107 (81%), Positives = 92/107 (85%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILATRKQSVE  LKD
Sbjct: 384  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKD 443

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
            HWQKYG  F  +Y+Y EVEAEGA+KMMKELEALISDRS  G+QFPVG
Sbjct: 444  HWQKYGRNFFTRYDYEEVEAEGANKMMKELEALISDRSFVGKQFPVG 490


>ref|XP_003127994.1| PREDICTED: phosphoglucomutase-1 isoform 2 [Sus scrofa].
          Length = 580

 Score =  601 bits (1549), Expect(2) = 0.0
 Identities = 301/360 (83%), Positives = 316/360 (87%)
 Frame = +2

Query: 164  IVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVGGDG 343
            ++T  T  Y DQKPGTSGLRK+   F++   Y ENFIQSI  +++   RQ ++LVVGGDG
Sbjct: 22   LLTFTTAPYYDQKPGTSGLRKKTYFFEAKPCYLENFIQSIFFSIDLKDRQGSSLVVGGDG 81

Query: 344  RFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNPGGP 523
            R++ K AI+ IV++AAANGIGRLVIGQNGILSTPAVSC            LTASHNPGGP
Sbjct: 82   RYFNKSAIETIVQMAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGP 141

Query: 524  NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP 703
            NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP
Sbjct: 142  NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP 201

Query: 704  FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA 883
            FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA
Sbjct: 202  FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA 261

Query: 884  PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKHGFF 1063
            PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEH           RNMILGKHGFF
Sbjct: 262  PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNMILGKHGFF 321

Query: 1064 VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG 1243
            VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG
Sbjct: 322  VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG 381



 Score =  176 bits (447), Expect(2) = 0.0
 Identities = 87/107 (81%), Positives = 92/107 (85%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILATRKQSVE  LKD
Sbjct: 374  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKD 433

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
            HWQKYG  F  +Y+Y EVEAEGA+KMMKELEALISDRS  G+QFPVG
Sbjct: 434  HWQKYGRNFFTRYDYEEVEAEGANKMMKELEALISDRSFVGKQFPVG 480


>ref|XP_003121981.2| PREDICTED: phosphoglucomutase-like protein 5-like [Sus scrofa].
          Length = 539

 Score =  414 bits (1064), Expect = e-116
 Identities = 196/300 (65%), Positives = 234/300 (78%)
 Frame = +2

Query: 398  GIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNPGGPNGDFGIKFNISNGGPAPE 577
            GIGRL+IGQNGILSTPAVSC            LTASH PGGP G+FG+KFN++NGGPAP+
Sbjct: 59   GIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCPGGPGGEFGVKFNVANGGPAPD 118

Query: 578  AITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRN 757
             ++DKI+QISKTIEEYAICPDL++DL  LG+Q+FDLENKFKPF VEIVD V+ Y  +LR 
Sbjct: 119  VVSDKIYQISKTIEEYAICPDLRIDLSRLGRQEFDLENKFKPFRVEIVDPVDIYLNLLRT 178

Query: 758  IFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHH 937
            IFDFNA+K LL+GP +LKIR+DAMHGV+GPYV+K+LC+ELGAPANSA+NCVPLEDFGG H
Sbjct: 179  IFDFNAIKSLLTGPGQLKIRVDAMHGVMGPYVRKVLCDELGAPANSAINCVPLEDFGGQH 238

Query: 938  PDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKHGFFVNPSDSVAVIAANIFSIP 1117
            PDPNLTYA  L+E MK GE+           R MILG++GFFV+PSDS+A+IAAN+  IP
Sbjct: 239  PDPNLTYATTLLEAMKGGEYGFGAAFDADGDRYMILGQNGFFVSPSDSLAIIAANLSCIP 298

Query: 1118 YFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGI*WMQANCPFVGRRASET 1297
            YF+Q GVRGF RSMPTS ALDRVA + K+ +YETP GW+FF        C   G  +  T
Sbjct: 299  YFRQMGVRGFGRSMPTSTALDRVAKSMKVPVYETPAGWRFFSNLMDSGRCSLCGEESFGT 358



 Score =  130 bits (327), Expect = 2e-30
 Identities = 58/101 (57%), Positives = 79/101 (78%)
 Frame = +1

Query: 1237 FWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKDHWQKYG 1416
            F NLMD+ + SLCGEESFG GSDH+REKDGLWAVL WLSI+A RKQSVE  ++DHW K+G
Sbjct: 339  FSNLMDSGRCSLCGEESFGTGSDHLREKDGLWAVLVWLSIIAARKQSVEEIVRDHWAKFG 398

Query: 1417 PEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
              +  +++Y  +E +  + +M++LEAL++D+S  G+QF VG
Sbjct: 399  RHYYCRFDYEGLEPKTTYYIMRDLEALVTDKSFIGQQFAVG 439


>ref|XP_003361355.1| PREDICTED: phosphoglucomutase-like protein 5-like, partial [Sus
           scrofa].
          Length = 148

 Score =  218 bits (554), Expect = 9e-57
 Identities = 101/145 (69%), Positives = 120/145 (82%)
 Frame = +2

Query: 401 IGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNPGGPNGDFGIKFNISNGGPAPEA 580
           IGRL+IGQNGILSTPAVSC            LTASH PGGP G+FG+KFN++NGGPAP+ 
Sbjct: 4   IGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCPGGPGGEFGVKFNVANGGPAPDV 63

Query: 581 ITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNI 760
           ++DKI+QISKTIEEYAICPDL++DL  LG+Q+FDLENKFKPF VEIVD V+ Y  +LR I
Sbjct: 64  VSDKIYQISKTIEEYAICPDLRIDLSRLGRQEFDLENKFKPFRVEIVDPVDIYLNLLRTI 123

Query: 761 FDFNALKELLSGPNRLKIRIDAMHG 835
           FDFNA+K LL+GP +LKIR+DAMHG
Sbjct: 124 FDFNAIKSLLTGPGQLKIRVDAMHG 148


>ref|XP_003121980.2| PREDICTED: phosphoglucomutase-like protein 5-like [Sus scrofa].
          Length = 213

 Score =  158 bits (399), Expect = 9e-39
 Identities = 72/102 (70%), Positives = 85/102 (83%)
 Frame = +2

Query: 401 IGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNPGGPNGDFGIKFNISNGGPAPEA 580
           IGRL+IGQNGILSTPAVSC            LTASH PGGP G+FG+KFN++NGGPAP+ 
Sbjct: 16  IGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCPGGPGGEFGVKFNVANGGPAPDV 75

Query: 581 ITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPF 706
           ++DKI+QISKTIEEYAICPDL++DL  LG+Q+FDLENKFKPF
Sbjct: 76  VSDKIYQISKTIEEYAICPDLRIDLSRLGRQEFDLENKFKPF 117


>ref|XP_003121984.2| PREDICTED: phosphoglucomutase-like protein 5-like [Sus scrofa].
          Length = 312

 Score =  130 bits (327), Expect = 2e-30
 Identities = 58/101 (57%), Positives = 79/101 (78%)
 Frame = +1

Query: 1237 FWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKDHWQKYG 1416
            F NLMD+ + SLCGEESFG GSDH+REKDGLWAVL WLSI+A RKQSVE  ++DHW K+G
Sbjct: 32   FSNLMDSGRCSLCGEESFGTGSDHLREKDGLWAVLVWLSIIAARKQSVEEIVRDHWAKFG 91

Query: 1417 PEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
              +  +++Y  +E +  + +M++LEAL++D+S  G+QF VG
Sbjct: 92   RHYYCRFDYEGLEPKTTYYIMRDLEALVTDKSFIGQQFAVG 132


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 37,630,825
Number of extensions: 1052495
Number of successful extensions: 3225
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 3225
Number of HSP's successfully gapped: 9
Length of query: 513
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 410
Effective length of database: 8,779,541
Effective search space: 3599611810
Effective search space used: 3599611810
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012560
         (1541 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_082408.3| phosphoglucomutase-1 [Mus musculus].                 659   0.0  
Alignment   gi|NP_778178.3| phosphoglucomutase-like protein 5 [Mus musculus].    490   e-138

>ref|NP_082408.3| phosphoglucomutase-1 [Mus musculus].
          Length = 562

 Score =  659 bits (1699), Expect(2) = 0.0
 Identities = 333/363 (91%), Positives = 337/363 (92%)
 Frame = +2

Query: 155  MVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            MVKIVTVKT+AY DQKPGTSGLRKRVKVFQS+ANYAENFIQSI+STVEPA RQEATLVVG
Sbjct: 1    MVKIVTVKTQAYPDQKPGTSGLRKRVKVFQSNANYAENFIQSIVSTVEPALRQEATLVVG 60

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
            GDGRFYM EAIQLIVRIAAANGIGRLVIGQNGILSTPAVSC            LTASHNP
Sbjct: 61   GDGRFYMTEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP 120

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK
Sbjct: 121  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 180

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
            FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE
Sbjct: 181  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 240

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMK+GEH           RNMILGKH
Sbjct: 241  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKH 300

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 1234
            GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK
Sbjct: 301  GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 360

Query: 1235 FFG 1243
            FFG
Sbjct: 361  FFG 363



 Score =  164 bits (414), Expect(2) = 0.0
 Identities = 80/104 (76%), Positives = 88/104 (84%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILATRKQSVE  LKD
Sbjct: 356  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKD 415

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQF 1530
            HWQK+G  F  +Y+Y EVEAEGA+KMMK+LEAL+ DRS  G+QF
Sbjct: 416  HWQKFGRNFFTRYDYEEVEAEGANKMMKDLEALMLDRSFVGKQF 459


>ref|NP_778178.3| phosphoglucomutase-like protein 5 [Mus musculus].
          Length = 567

 Score =  490 bits (1262), Expect = e-138
 Identities = 232/381 (60%), Positives = 293/381 (76%), Gaps = 1/381 (0%)
 Frame = +2

Query: 158  VKIVTVKTKAYQDQKP-GTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            + ++TV T  Y+DQ+P G  GLR+   +F+   NY  NFIQS++S+++   RQ  T+VVG
Sbjct: 6    IPVLTVPTAPYEDQRPTGGGGLRRPTGLFEGQRNYLPNFIQSVLSSIDLRDRQGCTMVVG 65

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
             DGR++ + A +++V++AAANGIGRL+IGQNGILSTPAVSC            LTASH P
Sbjct: 66   SDGRYFSRTATEIVVQMAAANGIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCP 125

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGP G+FG+KFN++NGGPAP+ ++DKI+QISKTIEEYAICPDL++DL  LG+Q+FDLENK
Sbjct: 126  GGPGGEFGVKFNVANGGPAPDVVSDKIYQISKTIEEYAICPDLRIDLSRLGRQEFDLENK 185

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
            FKPF VEIVD V+ Y  +LRNIFDFNA+K LL+GP++LKIR+DAMHGV+GPYV+K+LC+E
Sbjct: 186  FKPFRVEIVDPVDIYLNLLRNIFDFNAIKSLLTGPSQLKIRVDAMHGVMGPYVRKVLCDE 245

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSA+NCVPLEDFGG HPDPNLTYA  L+E MK GE+           R MILG++
Sbjct: 246  LGAPANSAINCVPLEDFGGQHPDPNLTYATTLLEAMKGGEYGFGAAFDADGDRYMILGQN 305

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 1234
            GFFV+PSDS+A+IAAN+  IPYF+Q GVRGF RSMPTS ALDRVA + K+ +YETP GW+
Sbjct: 306  GFFVSPSDSLAIIAANLSCIPYFRQMGVRGFGRSMPTSTALDRVAKSMKVPVYETPAGWR 365

Query: 1235 FFGI*WMQANCPFVGRRASET 1297
            FF        C   G  +  T
Sbjct: 366  FFSNLMDSGRCSLCGEESFGT 386



 Score =  132 bits (333), Expect = 6e-31
 Identities = 59/101 (58%), Positives = 79/101 (78%)
 Frame = +1

Query: 1237 FWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKDHWQKYG 1416
            F NLMD+ + SLCGEESFG GSDH+REKDGLWAVL WLSI+A RKQSVE  ++DHW KYG
Sbjct: 367  FSNLMDSGRCSLCGEESFGTGSDHLREKDGLWAVLVWLSIIAARKQSVEEIVRDHWAKYG 426

Query: 1417 PEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
              +  +++Y  +E +  + +M++LEAL++D+S  G+QF VG
Sbjct: 427  RHYYCRFDYEGLEPKATYYIMRDLEALVTDKSFIGQQFAVG 467


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 50,581,793
Number of extensions: 1384593
Number of successful extensions: 4160
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4158
Number of HSP's successfully gapped: 4
Length of query: 513
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 407
Effective length of database: 12,433,743
Effective search space: 5060533401
Effective search space used: 5060533401
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012560
         (1541 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002624.2| phosphoglucomutase-1 isoform 1 [Homo sapiens].       658   0.0  
Alignment   gi|NP_001166289.1| phosphoglucomutase-1 isoform 2 [Homo sapiens].    593   0.0  
Alignment   gi|NP_068800.2| phosphoglucomutase-like protein 5 [Homo sapiens].    487   e-137
Alignment   gi|NP_001166290.1| phosphoglucomutase-1 isoform 3 [Homo sapiens].    308   e-126

>ref|NP_002624.2| phosphoglucomutase-1 isoform 1 [Homo sapiens].
          Length = 562

 Score =  658 bits (1698), Expect(2) = 0.0
 Identities = 332/363 (91%), Positives = 338/363 (93%)
 Frame = +2

Query: 155  MVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            MVKIVTVKT+AYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPA RQEATLVVG
Sbjct: 1    MVKIVTVKTQAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEATLVVG 60

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
            GDGRFYMKEAIQLI RIAAANGIGRLVIGQNGILSTPAVSC            LTASHNP
Sbjct: 61   GDGRFYMKEAIQLIARIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP 120

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYA+CPDLKVDLGVLGKQQFDLENK
Sbjct: 121  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPDLKVDLGVLGKQQFDLENK 180

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
            FKPFTVEIVDSVEAYATMLR+IFDF+ALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE
Sbjct: 181  FKPFTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 240

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMK+GEH           RNMILGKH
Sbjct: 241  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKH 300

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 1234
            GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVA+ATKIALYETPTGWK
Sbjct: 301  GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVASATKIALYETPTGWK 360

Query: 1235 FFG 1243
            FFG
Sbjct: 361  FFG 363



 Score =  165 bits (418), Expect(2) = 0.0
 Identities = 81/104 (77%), Positives = 88/104 (84%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILATRKQSVE  LKD
Sbjct: 356  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKD 415

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQF 1530
            HWQKYG  F  +Y+Y EVEAEGA+KMMK+LEAL+ DRS  G+QF
Sbjct: 416  HWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQF 459


>ref|NP_001166289.1| phosphoglucomutase-1 isoform 2 [Homo sapiens].
          Length = 580

 Score =  593 bits (1529), Expect(2) = 0.0
 Identities = 296/360 (82%), Positives = 315/360 (87%)
 Frame = +2

Query: 164  IVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVGGDG 343
            ++T  T  Y DQKPGTSGLRK+   F+    Y ENFIQSI  +++   RQ ++LVVGGDG
Sbjct: 22   LLTFATAPYHDQKPGTSGLRKKTYYFEEKPCYLENFIQSIFFSIDLKDRQGSSLVVGGDG 81

Query: 344  RFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNPGGP 523
            R++ K AI+ IV++AAANGIGRLVIGQNGILSTPAVSC            LTASHNPGGP
Sbjct: 82   RYFNKSAIETIVQMAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGP 141

Query: 524  NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKP 703
            NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYA+CPDLKVDLGVLGKQQFDLENKFKP
Sbjct: 142  NGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPDLKVDLGVLGKQQFDLENKFKP 201

Query: 704  FTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA 883
            FTVEIVDSVEAYATMLR+IFDF+ALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA
Sbjct: 202  FTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA 261

Query: 884  PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKHGFF 1063
            PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMK+GEH           RNMILGKHGFF
Sbjct: 262  PANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFF 321

Query: 1064 VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG 1243
            VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVA+ATKIALYETPTGWKFFG
Sbjct: 322  VNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVASATKIALYETPTGWKFFG 381



 Score =  165 bits (418), Expect(2) = 0.0
 Identities = 81/104 (77%), Positives = 88/104 (84%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILATRKQSVE  LKD
Sbjct: 374  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKD 433

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQF 1530
            HWQKYG  F  +Y+Y EVEAEGA+KMMK+LEAL+ DRS  G+QF
Sbjct: 434  HWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQF 477


>ref|NP_068800.2| phosphoglucomutase-like protein 5 [Homo sapiens].
          Length = 567

 Score =  487 bits (1253), Expect = e-137
 Identities = 232/381 (60%), Positives = 293/381 (76%), Gaps = 1/381 (0%)
 Frame = +2

Query: 158  VKIVTVKTKAYQDQKP-GTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVG 334
            + ++TV T  Y+DQ+P G  GLR+   +F+   NY  NFIQS++S+++   RQ  T+VVG
Sbjct: 6    IPVLTVPTAPYEDQRPAGGGGLRRPTGLFEGQRNYLPNFIQSVLSSIDLRDRQGCTMVVG 65

Query: 335  GDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCXXXXXXXXXXXXLTASHNP 514
             DGR++ + AI+++V++AAANGIGRL+IGQNGILSTPAVSC            LTASH P
Sbjct: 66   SDGRYFSRTAIEIVVQMAAANGIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCP 125

Query: 515  GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENK 694
            GGP G+FG+KFN++NGGPAP+ ++DKI+QISKTIEEYAICPDL++DL  LG+Q+FDLENK
Sbjct: 126  GGPGGEFGVKFNVANGGPAPDVVSDKIYQISKTIEEYAICPDLRIDLSRLGRQEFDLENK 185

Query: 695  FKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE 874
            FKPF VEIVD V+ Y  +LR IFDF+A+K LL+GP++LKIRIDAMHGV+GPYV+K+LC+E
Sbjct: 186  FKPFRVEIVDPVDIYLNLLRTIFDFHAIKGLLTGPSQLKIRIDAMHGVMGPYVRKVLCDE 245

Query: 875  LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKH 1054
            LGAPANSA+NCVPLEDFGG HPDPNLTYA  L+E MK GE+           R MILG++
Sbjct: 246  LGAPANSAINCVPLEDFGGQHPDPNLTYATTLLEAMKGGEYGFGAAFDADGDRYMILGQN 305

Query: 1055 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWK 1234
            GFFV+PSDS+A+IAAN+  IPYF+Q GVRGF RSMPTS ALDRVA + K+ +YETP GW+
Sbjct: 306  GFFVSPSDSLAIIAANLSCIPYFRQMGVRGFGRSMPTSMALDRVAKSMKVPVYETPAGWR 365

Query: 1235 FFGI*WMQANCPFVGRRASET 1297
            FF        C   G  +  T
Sbjct: 366  FFSNLMDSGRCNLCGEESFGT 386



 Score =  128 bits (321), Expect = 2e-29
 Identities = 56/101 (55%), Positives = 79/101 (78%)
 Frame = +1

Query: 1237 FWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKDHWQKYG 1416
            F NLMD+ + +LCGEESFG GSDH+REKDGLWAVL WLSI+A RKQSVE  ++DHW K+G
Sbjct: 367  FSNLMDSGRCNLCGEESFGTGSDHLREKDGLWAVLVWLSIIAARKQSVEEIVRDHWAKFG 426

Query: 1417 PEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQFPVG 1539
              +  +++Y  ++ +  + +M++LEAL++D+S  G+QF VG
Sbjct: 427  RHYYCRFDYEGLDPKTTYYIMRDLEALVTDKSFIGQQFAVG 467


>ref|NP_001166290.1| phosphoglucomutase-1 isoform 3 [Homo sapiens].
          Length = 365

 Score =  308 bits (788), Expect(2) = e-126
 Identities = 151/166 (90%), Positives = 155/166 (93%)
 Frame = +2

Query: 746  MLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDF 925
            MLR+IFDF+ALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDF
Sbjct: 1    MLRSIFDFSALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDF 60

Query: 926  GGHHPDPNLTYAADLVETMKTGEHXXXXXXXXXXXRNMILGKHGFFVNPSDSVAVIAANI 1105
            GGHHPDPNLTYAADLVETMK+GEH           RNMILGKHGFFVNPSDSVAVIAANI
Sbjct: 61   GGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANI 120

Query: 1106 FSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFG 1243
            FSIPYFQQTGVRGFARSMPTSGALDRVA+ATKIALYETPTGWKFFG
Sbjct: 121  FSIPYFQQTGVRGFARSMPTSGALDRVASATKIALYETPTGWKFFG 166



 Score =  165 bits (418), Expect(2) = e-126
 Identities = 81/104 (77%), Positives = 88/104 (84%)
 Frame = +1

Query: 1219 PNWLEVFWNLMDASKLSLCGEESFGNGSDHIREKDGLWAVLAWLSILATRKQSVEGHLKD 1398
            P   + F NLMDASKLSLCGEESFG GSDHIREKDGLWAVLAWLSILATRKQSVE  LKD
Sbjct: 159  PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKD 218

Query: 1399 HWQKYGPEFLPQYEYXEVEAEGAHKMMKELEALISDRSLWGEQF 1530
            HWQKYG  F  +Y+Y EVEAEGA+KMMK+LEAL+ DRS  G+QF
Sbjct: 219  HWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQF 262


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 59,871,172
Number of extensions: 1660914
Number of successful extensions: 5077
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 5067
Number of HSP's successfully gapped: 8
Length of query: 513
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 406
Effective length of database: 14,770,016
Effective search space: 5996626496
Effective search space used: 5996626496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012560
         (1541 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr06                                                         791   0.0  
Sscrofa_Chr16                                                         321   6e-85
Sscrofa_Chr01                                                          78   2e-11

>Sscrofa_Chr06 
||          Length = 157765593

 Score =  791 bits (399), Expect = 0.0
 Identities = 399/399 (100%)
 Strand = Plus / Minus

                                                                             
Query: 2         ctgtccctttaaggaggagggacgagcaaggccgagggagctgccgctgccccgacccgg 61
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137233553 ctgtccctttaaggaggagggacgagcaaggccgagggagctgccgctgccccgacccgg 137233494

                                                                             
Query: 62        tccgcgccctcaccccagagcagccgcagccacagtcccggccgtcccccggttggcaga 121
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137233493 tccgcgccctcaccccagagcagccgcagccacagtcccggccgtcccccggttggcaga 137233434

                                                                             
Query: 122       gtccgctccggccccagaaagcaaaccgccaccatggtgaagatcgtgaccgttaagacc 181
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137233433 gtccgctccggccccagaaagcaaaccgccaccatggtgaagatcgtgaccgttaagacc 137233374

                                                                             
Query: 182       aaggcgtatcaagaccagaagccgggcacgagcgggctgcggaagcgggtgaaggtgttt 241
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137233373 aaggcgtatcaagaccagaagccgggcacgagcgggctgcggaagcgggtgaaggtgttt 137233314

                                                                             
Query: 242       cagagcagcgccaactacgcggagaatttcatccagagtatcatctccaccgtggagccg 301
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137233313 cagagcagcgccaactacgcggagaatttcatccagagtatcatctccaccgtggagccg 137233254

                                                                             
Query: 302       gcgcatcggcaggaggccaccctggtggtgggcggggacggcaggttttacatgaaggag 361
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137233253 gcgcatcggcaggaggccaccctggtggtgggcggggacggcaggttttacatgaaggag 137233194

                                                        
Query: 362       gccatccagctcatcgtccgcatcgccgccgccaacggg 400
                 |||||||||||||||||||||||||||||||||||||||
Sbjct: 137233193 gccatccagctcatcgtccgcatcgccgccgccaacggg 137233155



 Score =  385 bits (194), Expect = e-104
 Identities = 194/194 (100%)
 Strand = Plus / Minus

                                                                             
Query: 835       agtcgtggggccgtacgtgaagaagatcctgtgtgaggagctgggagcccccgcaaactc 894
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137195231 agtcgtggggccgtacgtgaagaagatcctgtgtgaggagctgggagcccccgcaaactc 137195172

                                                                             
Query: 895       ggcggtgaactgcgttcctctggaggactttgggggccaccaccctgaccccaacctcac 954
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137195171 ggcggtgaactgcgttcctctggaggactttgggggccaccaccctgaccccaacctcac 137195112

                                                                             
Query: 955       ctatgctgccgacctggtggagacgatgaagacaggagagcatgattttggggctgcctt 1014
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137195111 ctatgctgccgacctggtggagacgatgaagacaggagagcatgattttggggctgcctt 137195052

                               
Query: 1015      tgatggagatgggg 1028
                 ||||||||||||||
Sbjct: 137195051 tgatggagatgggg 137195038



 Score =  329 bits (166), Expect = 3e-87
 Identities = 166/166 (100%)
 Strand = Plus / Minus

                                                                             
Query: 400       gattggtcgcttggttattggacagaatggaatcctctccacccctgctgtatcctgcat 459
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137200575 gattggtcgcttggttattggacagaatggaatcctctccacccctgctgtatcctgcat 137200516

                                                                             
Query: 460       cattagaaagatcaaagccattggtgggatcatcctgacagccagccacaacccaggagg 519
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137200515 cattagaaagatcaaagccattggtgggatcatcctgacagccagccacaacccaggagg 137200456

                                                               
Query: 520       acccaatggagattttggaatcaaattcaatatttccaacggaggt 565
                 ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137200455 acccaatggagattttggaatcaaattcaatatttccaacggaggt 137200410



 Score =  311 bits (157), Expect = 6e-82
 Identities = 157/157 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1027      ggatcgaaacatgattctgggcaagcatgggttctttgtgaacccttcagactccgtggc 1086
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137193526 ggatcgaaacatgattctgggcaagcatgggttctttgtgaacccttcagactccgtggc 137193467

                                                                             
Query: 1087      tgtcatcgctgccaacatcttcagcattccgtatttccagcaaactggggtccgcggctt 1146
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137193466 tgtcatcgctgccaacatcttcagcattccgtatttccagcaaactggggtccgcggctt 137193407

                                                      
Query: 1147      tgcacgcagcatgcccaccagtggtgccctggaccgg 1183
                 |||||||||||||||||||||||||||||||||||||
Sbjct: 137193406 tgcacgcagcatgcccaccagtggtgccctggaccgg 137193370



 Score =  295 bits (149), Expect = 4e-77
 Identities = 149/149 (100%)
 Strand = Plus / Minus

                                                                             
Query: 562       aggtcctgccccggaagcaataacggataagattttccaaatcagcaagacaattgaaga 621
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137200097 aggtcctgccccggaagcaataacggataagattttccaaatcagcaagacaattgaaga 137200038

                                                                             
Query: 622       atacgcgatttgccctgacctgaaagtagaccttggggttctgggaaagcagcagtttga 681
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137200037 atacgcgatttgccctgacctgaaagtagaccttggggttctgggaaagcagcagtttga 137199978

                                              
Query: 682       cctggaaaacaagttcaaacccttcacag 710
                 |||||||||||||||||||||||||||||
Sbjct: 137199977 cctggaaaacaagttcaaacccttcacag 137199949



 Score =  262 bits (132), Expect = 5e-67
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                             
Query: 705       tcacagtggaaattgtggactcggtggaagcctatgctaccatgctgagaaacatctttg 764
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137198264 tcacagtggaaattgtggactcggtggaagcctatgctaccatgctgagaaacatctttg 137198205

                                                                             
Query: 765       acttcaatgcactgaaagaactgctttctggtccaaaccgactgaagatccgtatagacg 824
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137198204 acttcaatgcactgaaagaactgctttctggtccaaaccgactgaagatccgtatagacg 137198145

                             
Query: 825       ccatgcacggag 836
                 ||||||||||||
Sbjct: 137198144 ccatgcacggag 137198133



 Score =  210 bits (106), Expect = 2e-51
 Identities = 113/114 (99%), Gaps = 1/114 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1182      gggtggctaatgctacaaagattgctttgtacgagaccccaactggttggaagtttttt- 1240
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 137190516 gggtggctaatgctacaaagattgctttgtacgagaccccaactggttggaagttttttg 137190457

                                                                       
Query: 1241      ggaatctgatggatgcaagcaaactgtccctttgtggggaggagagcttcggaa 1294
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137190456 ggaatctgatggatgcaagcaaactgtccctttgtggggaggagagcttcggaa 137190403



 Score =  204 bits (103), Expect = 1e-49
 Identities = 133/139 (95%), Gaps = 3/139 (2%)
 Strand = Plus / Minus

                                                                             
Query: 1297      ggttctgaccacatccgtgagaaggacggactctgggctgtccttgcctggctctccatc 1356
                 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 137181305 ggttctgaccacatccgtgagaaggacggactctgggctgtccttgcttggctctccatc 137181246

                                                                             
Query: 1357      ctcgctacccgcaagcagagtgtggagggaca-tctcaaagatcactggcaaaagtatgg 1415
                 ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 137181245 ctcgccacccgcaagcagagtgtgga-ggacattctcaaagatcactggcaaaagtatgg 137181187

                                    
Query: 1416      cccggaatttcttccccag 1434
                  ||||||||||||| ||||
Sbjct: 137181186 -ccggaatttcttcaccag 137181169



 Score =  153 bits (77), Expect = 3e-34
 Identities = 100/108 (92%)
 Strand = Plus / Minus

                                                                             
Query: 1434      gtacgaatacnaagaggtggaagctgagggtgcccacaaaatgatgaaagaattggaggc 1493
                 |||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 137177764 gtacgattacgaagaggtggaagctgagggtgccaacaaaatgatgaaggaattggaggc 137177705

                                                                 
Query: 1494      tctgatctctgaccgctccctctggggggaacagttcccagtgggtga 1541
                 ||||||||||||||||||| ||  |||| |||||||||||||||||||
Sbjct: 137177704 tctgatctctgaccgctccttcgtggggaaacagttcccagtgggtga 137177657


>Sscrofa_Chr16 
||          Length = 86898991

 Score =  321 bits (162), Expect = 6e-85
 Identities = 316/366 (86%), Gaps = 1/366 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1037     atgattctgggcaagcatgggttctttgtgaacccttcagactccgtggctgtcatcgct 1096
                ||||||||||||| || ||||||| || ||||||||||||||||| |||||||||| |||
Sbjct: 18919411 atgattctgggcatgcctgggttccttatgaacccttcagactccatggctgtcattgct 18919352

                                                                            
Query: 1097     gccaacatcttcagcattccgtatttccagcaaactggggtccgcggctttgcacgcagc 1156
                |||||||||||||||||||| |||| |||||||| || |||||  |||||||||| ||| 
Sbjct: 18919351 gccaacatcttcagcattccatattaccagcaaaatgaggtccatggctttgcacacagt 18919292

                                                                            
Query: 1157     atgcccaccagtggtgccctggaccgggtggctaatgctacaaagattgctttgtacgag 1216
                 | | |||||||||||  ||||||| |||||||||||| |||||||    |||||  |||
Sbjct: 18919291 gttctcaccagtggtgtgctggaccaggtggctaatgccacaaagaccattttgtgtgag 18919232

                                                                            
Query: 1217     accccaactggttggaagtttttt-ggaatctgatggatgcaagcaaactgtccctttgt 1275
                ||||||||||| | |||||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 18919231 accccaactggctagaagtttttttggaatctgatggatgcaagcaaacggtccctctgt 18919172

                                                                            
Query: 1276     ggggaggagagcttcggaaacggttctgaccacatccgtgagaaggacggactctgggct 1335
                ||||||||||||||| ||| | |||||||||||| | ||||||| ||||||| |||||||
Sbjct: 18919171 ggggaggagagcttcagaaccagttctgaccacagctgtgagaatgacggaccctgggct 18919112

                                                                            
Query: 1336     gtccttgcctggctctccatcctcgctacccgcaagcagagtgtggagggacatctcaaa 1395
                |||||||| ||| |||||||||| || ||| |||| ||||| |||||||    |||||||
Sbjct: 18919111 gtccttgcttggttctccatcctagccacctgcaaacagagcgtggaggatattctcaaa 18919052

                      
Query: 1396     gatcac 1401
                ||||||
Sbjct: 18919051 gatcac 18919046


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 102/123 (82%)
 Strand = Plus / Plus

                                                                             
Query: 400       gattggtcgcttggttattggacagaatggaatcctctccacccctgctgtatcctgcat 459
                 |||||||||  || |||||||||||||||| ||| | || || |||||||| ||||||||
Sbjct: 247961313 gattggtcgactgattattggacagaatggcatcttgtcgacacctgctgtttcctgcat 247961372

                                                                             
Query: 460       cattagaaagatcaaagccattggtgggatcatcctgacagccagccacaacccaggagg 519
                  || ||||||||||| ||   |||||| |||||| | ||||||||||||  ||| |||||
Sbjct: 247961373 tatcagaaagatcaaggcagctggtggaatcatcttaacagccagccactgccctggagg 247961432

                    
Query: 520       acc 522
                 |||
Sbjct: 247961433 acc 247961435



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                             
Query: 861       tcctgtgtgaggagctgggagcccccgcaaactcggcggtgaactgcgttcctctggagg 920
                 |||||||||| |||||||||||||| || || || ||  | ||||| ||||| ||||| |
Sbjct: 247980585 tcctgtgtgatgagctgggagccccagccaattctgcaatcaactgtgttcccctggaag 247980644

                                                         
Query: 921       actttgggggccaccaccctgaccccaacctcacctatgc 960
                 | ||||||||||| || |||||||||||||| || |||||
Sbjct: 247980645 attttgggggccagcatcctgaccccaacctgacatatgc 247980684


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 40,115,498
Number of extensions: 196
Number of successful extensions: 196
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 191
Number of HSP's successfully gapped: 12
Length of query: 1541
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1520
Effective length of database: 2,808,413,156
Effective search space: 4268787997120
Effective search space used: 4268787997120
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)